BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147537.12 + phase: 0
(125 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN77147.1| fiber lipid transfer protein [Gossypium barbadense] 126 1e-28
gb|AAF35184.1| lipid transfer protein precursor [Gossypium hirsu... 125 2e-28
gb|AAC00499.1| lipid transfer protein precursor [Gossypium hirsu... 125 2e-28
gb|AAF35185.1| lipid transfer protein precursor [Gossypium hirsu... 124 4e-28
gb|AAY43801.1| FSLTP3 [Gossypium hirsutum] 124 5e-28
gb|AAR90329.1| lipid transfer protein precursor [Gossypium barba... 124 5e-28
gb|AAG29777.1| lipid transfer protein 3 precursor [Gossypium hir... 124 7e-28
gb|AAF35186.1| lipid transfer protein precursor [Gossypium hirsu... 122 2e-27
gb|AAY43800.1| FSLTP2 [Gossypium hirsutum] 121 3e-27
gb|AAL27855.1| lipid transfer protein precursor [Davidia involuc... 119 2e-26
gb|AAQ96338.1| lipid transfer protein [Vitis aestivalis] 117 6e-26
gb|AAO33394.1| lipid transfer protein isoform 4 [Vitis vinifera] 116 1e-25
gb|AAB34774.1| LTP [Gossypium hirsutum] gi|66271043|gb|AAY43799.... 116 1e-25
gb|AAF28385.1| lipid-transfer protein [Nicotiana glauca] 115 2e-25
gb|AAO33357.1| nonspecific lipid transfer protein 1 [Vitis berla... 114 4e-25
gb|AAS13435.1| lipid-transfer protein [Nicotiana attenuata] 114 4e-25
pir||S71564 lipid transfer protein SDi-9, drought-induced - comm... 114 7e-25
emb|CAA63340.1| lipid transfer protein [Helianthus annuus] gi|60... 113 1e-24
gb|AAT68262.1| lipid transfer protein [Nicotiana glauca] 113 1e-24
gb|AAA75599.1| nonspecific lipid transfer protein precursor gi|2... 113 1e-24
>gb|AAN77147.1| fiber lipid transfer protein [Gossypium barbadense]
Length = 120
Score = 126 bits (317), Expect = 1e-28
Identities = 61/118 (51%), Positives = 84/118 (70%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ ++ CMV+G P A++C QV + L PC+ Y+TGNG G VP CC
Sbjct: 1 MASSMSL-KLACVAVL-CMVVGAPLAHGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCG 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T DRQAAC+CIK+A + I G+N I +GLP KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDC 116
>gb|AAF35184.1| lipid transfer protein precursor [Gossypium hirsutum]
gi|11273807|pir||T51144 lipid transfer protein precursor
[imported] - upland cotton
Length = 120
Score = 125 bits (315), Expect = 2e-28
Identities = 60/120 (50%), Positives = 84/120 (70%), Gaps = 3/120 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ +++CMV+G P ++C QV L PC+ Y+ GNG G VPQ CC
Sbjct: 1 MASSMSL-KLACV-VVLCMVVGAPLAQGTVTCGQVTGSLAPCINYLRGNGAGAVPQGCCS 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
G+K++N+ A T DRQAAC+CIK+A + I G+N I +GLP KCGV++PY + PST C +
Sbjct: 59 GIKSLNSAAQTTPDRQAACKCIKSAAAGIPGINYGIASGLPGKCGVNIPYKISPSTDCSR 118
>gb|AAC00499.1| lipid transfer protein precursor [Gossypium hirsutum]
gi|7438303|pir||T09790 lipid transfer protein precursor
- upland cotton
Length = 120
Score = 125 bits (315), Expect = 2e-28
Identities = 61/118 (51%), Positives = 83/118 (69%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K C+ ++ CMV+G P A++C QV + L PC+ Y+TGNG G VP CC
Sbjct: 1 MASSMSL-KPACVAVL-CMVVGAPLAQGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCG 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T DRQAAC+CIK+A + I G+N I +GLP KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGLPGKCGVNIPYKISPSTDC 116
>gb|AAF35185.1| lipid transfer protein precursor [Gossypium hirsutum]
Length = 120
Score = 124 bits (312), Expect = 4e-28
Identities = 58/119 (48%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+TC+ ++ CMV+G P A+SC Q+ + L PC+ Y+ GNG G P CC+
Sbjct: 1 MASSMSL-KLTCV-VVFCMVVGAPLAQGAISCGQITSALAPCIAYLKGNGAGSAPPACCN 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCE 118
G++++N+ A T DRQAAC CIK+A + I G+N AGLP KCG+++PY + PST C+
Sbjct: 59 GIRSLNSAAKTTPDRQAACSCIKSAATGISGINYSTAAGLPGKCGINIPYKISPSTDCK 117
>gb|AAY43801.1| FSLTP3 [Gossypium hirsutum]
Length = 116
Score = 124 bits (311), Expect = 5e-28
Identities = 55/115 (47%), Positives = 81/115 (69%), Gaps = 2/115 (1%)
Query: 8 VKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCDGVKAINN 66
+K+ C+ +++CMV+G P A++C QV L PC+ Y+ G+G G VP CC G+K++N+
Sbjct: 3 LKLACV-VVLCMVVGAPLAQGAVTCGQVTNSLAPCINYLRGSGAGAVPPGCCSGIKSLNS 61
Query: 67 QAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEKYV 121
A T DRQAACRCIK+A + I G+N + +GLP KCGV++PY + PST C ++V
Sbjct: 62 AAQTTPDRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNRFV 116
>gb|AAR90329.1| lipid transfer protein precursor [Gossypium barbadense]
Length = 120
Score = 124 bits (311), Expect = 5e-28
Identities = 60/118 (50%), Positives = 83/118 (69%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ ++ CMV+G P A++C QV + L PC+ Y+TGNG G VP CC
Sbjct: 1 MASSMSL-KLACVAVL-CMVVGAPLAQGAVTCGQVTSSLAPCIGYLTGNGAGGVPPGCCG 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T DRQAAC+CIK+A + I G+N I +G P KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPDRQAACKCIKSAAAGISGINYGIASGPPGKCGVNIPYKISPSTDC 116
>gb|AAG29777.1| lipid transfer protein 3 precursor [Gossypium hirsutum]
Length = 120
Score = 124 bits (310), Expect = 7e-28
Identities = 59/118 (50%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ +++CMV+G P A++C QV L PC+ Y+ G+G G VP CC
Sbjct: 1 MASSMSL-KLACV-VVLCMVVGAPLAQGAVTCGQVTNSLAPCINYLRGSGAGAVPPGCCS 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T DRQAACRCIK+A + I G+N + +GLP KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPDRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDC 116
>gb|AAF35186.1| lipid transfer protein precursor [Gossypium hirsutum]
Length = 120
Score = 122 bits (307), Expect = 2e-27
Identities = 57/118 (48%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ +++CMV+G P A++C QV + L PC+ Y+ G G G +P CC
Sbjct: 1 MASSMYL-KLACV-VVLCMVVGAPLAQGAVTCGQVTSSLAPCINYLRGTGAGAIPPGCCS 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T DRQAAC+CIK+A + I G+N + +GLP KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPDRQAACKCIKSAAAGIPGINFGLASGLPGKCGVNIPYKISPSTDC 116
>gb|AAY43800.1| FSLTP2 [Gossypium hirsutum]
Length = 120
Score = 121 bits (304), Expect = 3e-27
Identities = 58/122 (47%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ +++ MV+G P A++C QV L PC+ Y+ G+G G VP CC
Sbjct: 1 MASSMSL-KLACV-VVLGMVVGAPLAQGAVTCGQVTNSLAPCINYLRGSGAGAVPPGCCS 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
G+K++N+ A T DRQAACRCIK+A + I G+N + +GLP KCGV++PY + P+T C +
Sbjct: 59 GIKSLNSAAQTTPDRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPNTDCNR 118
Query: 120 YV 121
+V
Sbjct: 119 FV 120
>gb|AAL27855.1| lipid transfer protein precursor [Davidia involucrata]
Length = 120
Score = 119 bits (298), Expect = 2e-26
Identities = 54/119 (45%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDG 60
M S V++KV + ++MCMV+ P A++C V L PC+ Y+ GG VP CC+G
Sbjct: 1 MGRSGVVIKVGIVAVLMCMVVSAPHAEAAITCGTVTVSLAPCLNYLK-KGGPVPPACCNG 59
Query: 61 VKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
+K++N A T +DRQAAC C+KTA+++I G+N+ + LP KCGV++PY + PST C K
Sbjct: 60 IKSLNAAAKTTADRQAACNCLKTASTSIAGINLSYASSLPGKCGVNVPYKISPSTDCSK 118
>gb|AAQ96338.1| lipid transfer protein [Vitis aestivalis]
Length = 119
Score = 117 bits (293), Expect = 6e-26
Identities = 52/113 (46%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 8 VKVTCLTMMMCMVLGLPQTLDA-LSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVKAINN 66
VK+ C+ M++CMV+ P ++A ++C QV + L PC+ Y+ GG VP CC G+K++N+
Sbjct: 7 VKLACV-MVICMVMAAPAAVEAAITCGQVASALSPCISYLQ-KGGAVPPACCSGIKSLNS 64
Query: 67 QAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
A T +DRQAAC+C+K +S + G+N+ + +GLP KCGV +PY + PST C K
Sbjct: 65 SAKTTADRQAACKCLKNFSSTVSGINLSLASGLPGKCGVSVPYKISPSTDCTK 117
>gb|AAO33394.1| lipid transfer protein isoform 4 [Vitis vinifera]
Length = 119
Score = 116 bits (291), Expect = 1e-25
Identities = 53/113 (46%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 8 VKVTCLTMMMCMVLGLPQTLDA-LSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVKAINN 66
VK+ C+ M++CMV+ P ++A ++C QV + L PC+ Y+ GG VP CC G+K++N+
Sbjct: 7 VKLACV-MVICMVVAAPAVVEATVTCGQVASALSPCISYLQ-KGGAVPAGCCSGIKSLNS 64
Query: 67 QAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
A T DRQAAC+C+KT +S++ G+N + +GLP KCGV +PY + PST C K
Sbjct: 65 AAKTTGDRQAACKCLKTFSSSVSGINYGLASGLPGKCGVSVPYKISPSTDCSK 117
>gb|AAB34774.1| LTP [Gossypium hirsutum] gi|66271043|gb|AAY43799.1| NSLTP1
[Gossypium hirsutum] gi|7438304|pir||T10812 lipid
transfer protein - upland cotton
gi|2497743|sp|Q43129|NLT2_GOSHI NONSPECIFIC
LIPID-TRANSFER PROTEIN PRECURSOR (LTP) (GH3)
Length = 120
Score = 116 bits (290), Expect = 1e-25
Identities = 57/118 (48%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 1 MSSSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCD 59
M+SSM L K+ C+ +++CMV+G P A++ QV L PC+ Y+ G+G G VP CC
Sbjct: 1 MASSMSL-KLACV-VVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCT 58
Query: 60 GVKAINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
G+K++N+ A T RQAACRCIK+A + I G+N + +GLP KCGV++PY + PST C
Sbjct: 59 GIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDC 116
>gb|AAF28385.1| lipid-transfer protein [Nicotiana glauca]
Length = 117
Score = 115 bits (289), Expect = 2e-25
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 3 SSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVK 62
+ + L+ V C+ + M+ PQ A+SC QV + L PC+ YVT GG +P PCC G+K
Sbjct: 2 AKVALLVVVCMAAVAVMLT--PQADAAISCGQVVSSLTPCISYVT-KGGAIPAPCCSGIK 58
Query: 63 AINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
++NNQA + DRQ AC CIK+A +I G+N + + LP KCGV+LPY + PS C
Sbjct: 59 SLNNQATSTPDRQTACNCIKSAVGSISGINFGLASSLPGKCGVNLPYKISPSIDC 113
>gb|AAO33357.1| nonspecific lipid transfer protein 1 [Vitis berlandieri x Vitis
vinifera]
Length = 119
Score = 114 bits (286), Expect = 4e-25
Identities = 53/113 (46%), Positives = 80/113 (69%), Gaps = 3/113 (2%)
Query: 8 VKVTCLTMMMCMVLGLPQTLDA-LSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVKAINN 66
VK+ C+ M++CMV+ P ++A ++C QV + L C+ Y+ NGG VP CC G+K +N+
Sbjct: 7 VKLACV-MVICMVVAAPAAVEAAITCGQVSSALSSCLGYLK-NGGAVPPGCCSGIKNLNS 64
Query: 67 QAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
A T +DRQAAC+C+KT +++I G+N+ + +GLP KCGV +PY + PST C K
Sbjct: 65 AAQTTADRQAACKCLKTFSNSIPGINLGLASGLPGKCGVSVPYKISPSTDCSK 117
>gb|AAS13435.1| lipid-transfer protein [Nicotiana attenuata]
Length = 117
Score = 114 bits (286), Expect = 4e-25
Identities = 53/115 (46%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 3 SSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVK 62
+ + L+ V C+ + M+ P A+SC QV L PC+ YV GG +P PCC G+K
Sbjct: 2 AKVALLVVVCMAAVAVMLT--PHADAAISCGQVVASLSPCISYVR-QGGAIPAPCCSGIK 58
Query: 63 AINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
++NNQA + DRQ AC CIK+A +AI+G+N + LPSKCGV+LPY + PS C
Sbjct: 59 SLNNQATSTPDRQTACNCIKSAAAAINGINYSLAGSLPSKCGVNLPYKISPSIDC 113
>pir||S71564 lipid transfer protein SDi-9, drought-induced - common sunflower
Length = 116
Score = 114 bits (284), Expect = 7e-25
Identities = 54/102 (52%), Positives = 70/102 (67%), Gaps = 2/102 (1%)
Query: 18 CMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVKAINNQAVTKSDRQAA 77
CMV+G P T +ALSC QV ++L PC+ Y+T GG VP CC GVK++N+ A T DRQAA
Sbjct: 15 CMVVGAPYT-EALSCGQVSSRLAPCISYLT-KGGAVPPACCSGVKSLNSAAKTTPDRQAA 72
Query: 78 CRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
C C+K+A ++I G+N A P KCGV +PY + PST C K
Sbjct: 73 CGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSK 114
>emb|CAA63340.1| lipid transfer protein [Helianthus annuus]
gi|6093512|sp|Q39950|NLTP_HELAN Nonspecific
lipid-transfer protein precursor (LTP) (NsLTP) (SDI-9)
Length = 116
Score = 113 bits (282), Expect = 1e-24
Identities = 54/102 (52%), Positives = 69/102 (66%), Gaps = 2/102 (1%)
Query: 18 CMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVKAINNQAVTKSDRQAA 77
CMV+G P T +ALSC QV + L PC+ Y+T GG VP CC GVK++N+ A T DRQAA
Sbjct: 15 CMVVGAPYT-EALSCGQVSSSLAPCISYLT-KGGAVPPACCSGVKSLNSAAKTTPDRQAA 72
Query: 78 CRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTCEK 119
C C+K+A ++I G+N A P KCGV +PY + PST C K
Sbjct: 73 CGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSK 114
>gb|AAT68262.1| lipid transfer protein [Nicotiana glauca]
Length = 117
Score = 113 bits (282), Expect = 1e-24
Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 3 SSMVLVKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNGGYVPQPCCDGVK 62
+ + L+ V C+ + M+ P A+SC QV + L PC+ YVT GG +P PCC+G++
Sbjct: 2 AKVALLVVVCMAAVSVMLT--PHADAAISCGQVVSSLTPCISYVT-KGGAIPAPCCNGIE 58
Query: 63 AINNQAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
++NNQA + DRQ AC CIK+A ++I G+N + LP KCGV+LPY + PS C
Sbjct: 59 SLNNQATSTPDRQTACNCIKSAAASIKGINFSLAGSLPGKCGVNLPYKISPSIDC 113
>gb|AAA75599.1| nonspecific lipid transfer protein precursor
gi|2497742|sp|Q42762|NLT1_GOSHI NONSPECIFIC
LIPID-TRANSFER PROTEIN PRECURSOR (LTP)
Length = 116
Score = 113 bits (282), Expect = 1e-24
Identities = 52/111 (46%), Positives = 76/111 (67%), Gaps = 2/111 (1%)
Query: 8 VKVTCLTMMMCMVLGLPQTLDALSCLQVETKLMPCVPYVTGNG-GYVPQPCCDGVKAINN 66
+K+ C+ +++CMV+G P A++ QV L PC+ Y+ G+G G VP CC G+K++N+
Sbjct: 3 LKLACV-VVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNS 61
Query: 67 QAVTKSDRQAACRCIKTATSAIHGLNMDILAGLPSKCGVHLPYTLGPSTTC 117
A T RQAACRCIK+A + I G+N + +GLP KCGV++PY + PST C
Sbjct: 62 AAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDC 112
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,978,777
Number of Sequences: 2540612
Number of extensions: 7115910
Number of successful extensions: 12980
Number of sequences better than 10.0: 327
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 12529
Number of HSP's gapped (non-prelim): 328
length of query: 125
length of database: 863,360,394
effective HSP length: 101
effective length of query: 24
effective length of database: 606,758,582
effective search space: 14562205968
effective search space used: 14562205968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC147537.12