BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147497.9 - phase: 0
(148 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB81438.1| putative protein [Arabidopsis thaliana] gi|49721... 67 1e-10
emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris] 66 2e-10
gb|AAD42001.2| unknown protein [Arabidopsis thaliana] gi|1840137... 57 1e-07
gb|AAM65278.1| unknown [Arabidopsis thaliana] 55 5e-07
pir||A84671 hypothetical protein At2g27280 [imported] - Arabidop... 54 8e-07
dbj|BAA97317.1| unnamed protein product [Arabidopsis thaliana] g... 53 1e-06
gb|AAK03052.1| TolA [Pasteurella multocida subsp. multocida str.... 40 0.012
ref|XP_556948.1| ENSANGP00000026833 [Anopheles gambiae str. PEST... 39 0.034
emb|CAG86230.1| unnamed protein product [Debaryomyces hansenii C... 37 0.075
gb|AAR99585.1| calreticulin-like protein [Haemonchus contortus] 37 0.098
emb|CAE64515.1| Hypothetical protein CBG09253 [Caenorhabditis br... 37 0.098
gb|EAL01222.1| potential clathrin-associated protein AP-3 comple... 37 0.13
gb|AAF54076.2| CG1988-PA, isoform A [Drosophila melanogaster] gi... 37 0.13
gb|AAO41513.1| CG1988-PB, isoform B [Drosophila melanogaster] gi... 37 0.13
gb|AAH86293.1| LOC495824 protein [Xenopus laevis] 37 0.13
emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis] 37 0.13
ref|NP_079870.1| zinc finger, matrin type 2 [Mus musculus] gi|19... 36 0.17
ref|XP_533161.1| PREDICTED: similar to zinc finger, matrin type ... 36 0.17
ref|XP_535214.1| PREDICTED: similar to Histidyl-tRNA synthetase ... 36 0.17
ref|NP_688286.1| Tn5252, Orf28 [Streptococcus agalactiae 2603V/R... 36 0.17
>emb|CAB81438.1| putative protein [Arabidopsis thaliana] gi|4972120|emb|CAB43977.1|
putative protein [Arabidopsis thaliana]
gi|23296480|gb|AAN13067.1| unknown protein [Arabidopsis
thaliana] gi|15234308|ref|NP_194518.1| nuclear movement
family protein [Arabidopsis thaliana]
gi|7487473|pir||T09028 hypothetical protein T27E11.130 -
Arabidopsis thaliana
Length = 293
Score = 66.6 bits (161), Expect = 1e-10
Identities = 44/116 (37%), Positives = 62/116 (52%), Gaps = 20/116 (17%)
Query: 44 IPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVK-----VKKAKIT 98
+PF+++FDPSNP AFL+ V D I KES +F D+AEK +++A+ K +K K+
Sbjct: 15 VPFTASFDPSNPIAFLEKVLDVIGKES-NFLKKDTAEKEIVAAVMAAKQRLREAEKKKLE 73
Query: 99 VE-------EKMKVDKAAAVAEKKAK-------DVYEKEDEKKDEESGLTAPNQGN 140
E EK K D +K K D E E K+++ESG PN+GN
Sbjct: 74 KESVKSMEVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESGPIVPNKGN 129
>emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris]
Length = 295
Score = 65.9 bits (159), Expect = 2e-10
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 17/121 (14%)
Query: 36 YQPKSSKPIP---FSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKV 92
+QP+ K P FS+TFDPSNP FL++ +F++KES FF +S+ K V+S + VK
Sbjct: 12 HQPQPEKKQPSKKFSATFDPSNPLGFLQSTLEFVSKES-DFFAKESSAKDVVSLVQKVKE 70
Query: 93 KKAKITVEEKMK-VDKAAAVAEKKA------------KDVYEKEDEKKDEESGLTAPNQG 139
K + +K K +D++AA A A K V + E ++ E+S APN G
Sbjct: 71 KYIEEVENKKKKLLDESAAAAAAAAAAAASSSSSDLEKKVDDNESAEETEKSKYKAPNSG 130
Query: 140 N 140
N
Sbjct: 131 N 131
>gb|AAD42001.2| unknown protein [Arabidopsis thaliana] gi|18401379|ref|NP_565643.1|
hypothetical protein [Arabidopsis thaliana]
Length = 427
Score = 56.6 bits (135), Expect = 1e-07
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 44 IPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVE-EK 102
+PFS++F+PSNP FL+NV DFI KES +F D+AEK + A+ T K + + + E
Sbjct: 9 LPFSASFNPSNPLGFLENVLDFIGKES-NFLRKDTAEKEITDAVTTAKERLRETEKKTES 67
Query: 103 MKVDK 107
M V+K
Sbjct: 68 MDVEK 72
Score = 53.9 bits (128), Expect = 8e-07
Identities = 31/141 (21%), Positives = 69/141 (47%), Gaps = 18/141 (12%)
Query: 11 KKSFNVFVTKRIIVQTVKTQTSSPSYQPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKES 70
K+ + T + ++ + +T S + +PF+++FDPS+P FL+ VF+F+ K+S
Sbjct: 45 KEITDAVTTAKERLRETEKKTESMDVEKVRPSTLPFNASFDPSDPLGFLEKVFEFVGKKS 104
Query: 71 TSFFDNDSAEKVVLSAI-----------------CTVKVKKAKITVEEKMKVDKAAAVAE 113
+F D A +++A+ TVK+KK + + + ++++
Sbjct: 105 -NFLVKDKAVNAIITAVTDAKERLKEEEKESVKQATVKIKKYGLQIRAPSQKKQSSSRPL 163
Query: 114 KKAKDVYEKEDEKKDEESGLT 134
+ ++ ++DE+ D E ++
Sbjct: 164 LRTASIFGEDDEENDVEKEIS 184
>gb|AAM65278.1| unknown [Arabidopsis thaliana]
Length = 304
Score = 54.7 bits (130), Expect = 5e-07
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 29/132 (21%)
Query: 37 QPKSSKPI--PFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAI--CTVKV 92
+ SS+P+ PF +T +NP FL+ VFDF+ ++S F SAE ++ A+ K+
Sbjct: 10 ESSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS-DFLKKPSAEDEIVVAVRAAKEKL 68
Query: 93 KKAKITVEEKMKVDKAAAVAEKKAKDVYEK------------------------EDEKKD 128
KKA+ EK V AEK+ + EK +DE++
Sbjct: 69 KKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESVKPTMAASSAEPIEVEKPKDEEEK 128
Query: 129 EESGLTAPNQGN 140
+ESG PN+GN
Sbjct: 129 KESGPIVPNKGN 140
>pir||A84671 hypothetical protein At2g27280 [imported] - Arabidopsis thaliana
Length = 764
Score = 53.9 bits (128), Expect = 8e-07
Identities = 31/141 (21%), Positives = 69/141 (47%), Gaps = 18/141 (12%)
Query: 11 KKSFNVFVTKRIIVQTVKTQTSSPSYQPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKES 70
K+ + T + ++ + +T S + +PF+++FDPS+P FL+ VF+F+ K+S
Sbjct: 382 KEITDAVTTAKERLRETEKKTESMDVEKVRPSTLPFNASFDPSDPLGFLEKVFEFVGKKS 441
Query: 71 TSFFDNDSAEKVVLSAI-----------------CTVKVKKAKITVEEKMKVDKAAAVAE 113
+F D A +++A+ TVK+KK + + + ++++
Sbjct: 442 -NFLVKDKAVNAIITAVTDAKERLKEEEKESVKQATVKIKKYGLQIRAPSQKKQSSSRPL 500
Query: 114 KKAKDVYEKEDEKKDEESGLT 134
+ ++ ++DE+ D E ++
Sbjct: 501 LRTASIFGEDDEENDVEKEIS 521
Score = 37.0 bits (84), Expect = 0.098
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 58 FLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVE-EKMKVDK 107
FL+NV DFI KES +F D+AEK + A+ T K + + + E M V+K
Sbjct: 360 FLENVLDFIGKES-NFLRKDTAEKEITDAVTTAKERLRETEKKTESMDVEK 409
>dbj|BAA97317.1| unnamed protein product [Arabidopsis thaliana]
gi|27765036|gb|AAO23639.1| At5g53400 [Arabidopsis
thaliana] gi|15238732|ref|NP_200152.1| nuclear movement
family protein [Arabidopsis thaliana]
Length = 304
Score = 53.1 bits (126), Expect = 1e-06
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 29/132 (21%)
Query: 37 QPKSSKPI--PFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAI--CTVKV 92
+ SS+P+ PF +T +NP FL+ VFDF+ ++S F SAE ++ A+ K+
Sbjct: 10 ESSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS-DFLKKPSAEDEIVVAVRAAKEKL 68
Query: 93 KKAKITVEEKMKVDKAAAVAEKKAKDVYEK------------------------EDEKKD 128
KKA+ EK V AEK+ + EK ++E++
Sbjct: 69 KKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESVKPTIAASSAEPIEVEKPKEEEEK 128
Query: 129 EESGLTAPNQGN 140
+ESG PN+GN
Sbjct: 129 KESGPIVPNKGN 140
>gb|AAK03052.1| TolA [Pasteurella multocida subsp. multocida str. Pm70]
gi|15602833|ref|NP_245905.1| TolA [Pasteurella multocida
subsp. multocida str. Pm70]
Length = 389
Score = 40.0 bits (92), Expect = 0.012
Identities = 30/77 (38%), Positives = 34/77 (43%), Gaps = 7/77 (9%)
Query: 79 AEKVVLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYEK-------EDEKKDEES 131
AEK A KV+KAK E K+K +KA A AE KAK K E K D E+
Sbjct: 193 AEKAKAEAEAKAKVEKAKAEAEAKVKAEKAKAEAEAKAKAEKAKAEAKAKAEKAKADAEA 252
Query: 132 GLTAPNQGNLMRVIIGG 148
NQ L GG
Sbjct: 253 AQRKANQAALDDFFSGG 269
>ref|XP_556948.1| ENSANGP00000026833 [Anopheles gambiae str. PEST]
gi|55239051|gb|EAL40036.1| ENSANGP00000026833 [Anopheles
gambiae str. PEST]
Length = 196
Score = 38.5 bits (88), Expect = 0.034
Identities = 27/114 (23%), Positives = 56/114 (48%), Gaps = 5/114 (4%)
Query: 18 VTKRIIVQTVKTQTSSPSYQPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDND 77
VTK ++ K + K K + + + S + NV D + K+S +F D+
Sbjct: 38 VTKELL----KQREYKVDLDSKLGKSMVINKSTPSSQSGGYYCNVCDCVVKDSINFLDHI 93
Query: 78 SAEKVVLSAICTVKVKKAKI-TVEEKMKVDKAAAVAEKKAKDVYEKEDEKKDEE 130
+ +K + ++KV+++ + V+E+ K++K +KK ++ + E K+EE
Sbjct: 94 NGKKHQRNLGMSMKVERSSLDQVKERFKINKKKTEEKKKDYELESRVREAKEEE 147
>emb|CAG86230.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50419271|ref|XP_458159.1| unnamed protein product
[Debaryomyces hansenii]
Length = 1005
Score = 37.4 bits (85), Expect = 0.075
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 75 DNDSAEKV---VLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYEKEDE--KKDE 129
D SA++V LS+I K KKA+ VEEK K A V KK K+ +KE E KK E
Sbjct: 51 DTASADEVSGDFLSSIRKSKQKKAEKVVEEKNKPKDAPKVLSKKEKEKLKKEAEKQKKKE 110
Query: 130 ESGLTAPNQGN 140
++ + Q +
Sbjct: 111 QAAIKKAQQAD 121
>gb|AAR99585.1| calreticulin-like protein [Haemonchus contortus]
Length = 374
Score = 37.0 bits (84), Expect = 0.098
Identities = 36/122 (29%), Positives = 53/122 (42%), Gaps = 21/122 (17%)
Query: 30 QTSSPSYQPKSSKPIPFSSTFDPSNPTAFLKNV----FDFIAKESTSFFDN----DSAEK 81
Q +P Y+ K P + + P + K+ FD +S + FDN DS +
Sbjct: 246 QIKNPDYKGKWIHPEIDNPEYTPDDELYLYKDWGAIGFDLWQVKSGTIFDNILVTDSVDD 305
Query: 82 VVLSAICTV-------KVKKAKITVEEKMKVDKAAAVAE------KKAKDVYEKEDEKKD 128
A T K KK K EE+ K+++ A E K+AK+ EKEDE +D
Sbjct: 306 AKAHAAETFEKLKAVEKEKKDKADEEERKKIEEEAKKREEEDKKKKEAKEKEEKEDEDED 365
Query: 129 EE 130
+E
Sbjct: 366 KE 367
>emb|CAE64515.1| Hypothetical protein CBG09253 [Caenorhabditis briggsae]
Length = 396
Score = 37.0 bits (84), Expect = 0.098
Identities = 35/118 (29%), Positives = 57/118 (47%), Gaps = 17/118 (14%)
Query: 30 QTSSPSYQPKSSKPIPFSSTFDPSNPTAFLKNV----FDFIAKESTSFFDN----DSAEK 81
Q +P+Y+ K P + + P + +N FD +S + FDN DS E+
Sbjct: 274 QIKNPAYKGKWIHPEIENPEYTPDDELYLYENWGAIGFDLWQVKSGTIFDNVLITDSVEE 333
Query: 82 VVLSA------ICTVKVKKAKITVEEKMKVDKAA---AVAEKKAKDVYEKEDEKKDEE 130
A + TV+ +K + EE KV++ A A EK+AK ++E+EK++EE
Sbjct: 334 AEAHAAETFDKLKTVEKEKKEKADEEARKVEEEARKKAEEEKEAKKDDDEEEEKEEEE 391
>gb|EAL01222.1| potential clathrin-associated protein AP-3 complex component [Candida
albicans SC5314] gi|46441793|gb|EAL01087.1| potential
clathrin-associated protein AP-3 complex component
[Candida albicans SC5314]
Length = 1099
Score = 36.6 bits (83), Expect = 0.13
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 7 TSSIKKSFNVFVTKRIIV--QTVKTQTSSPSYQPKSSKPIPFS-STF--DPSNPTAFLKN 61
T+ +KK + + + IV + T S Q K P +TF D SN L N
Sbjct: 958 TNKLKKEKVLILDEETIVGESNITTPIESTQIQTHKEKKKPTKKNTFKIDSSN----LDN 1013
Query: 62 VFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYE 121
FD ++ +S + ND ++ L A+ + K K TVE K+K +K+AK +
Sbjct: 1014 -FDLVSNDSETQLHNDKEYEIDLEAL---REKLKKTTVEPKIK--------DKEAKSKKK 1061
Query: 122 KEDEKKDEESGLTAPNQGN 140
+ KK E G + + N
Sbjct: 1062 SKKSKKTSEEGKSTTTESN 1080
>gb|AAF54076.2| CG1988-PA, isoform A [Drosophila melanogaster]
gi|24644710|ref|NP_649687.1| CG1988-PA, isoform A
[Drosophila melanogaster]
Length = 428
Score = 36.6 bits (83), Expect = 0.13
Identities = 31/125 (24%), Positives = 55/125 (43%), Gaps = 13/125 (10%)
Query: 6 ATSSIKKSFNVFVTKRIIVQTVKTQTSSPSYQPKSSKPIPFSSTF---DPSNPTAFLKNV 62
A + +K++ V K + + KT + P+ PK++ P P S P P A + +
Sbjct: 313 AKTDVKENIKQEVKKEVKKEIAKTPSPPPAQPPKAANPSPPPSKAAPPSPPKPKANPEGL 372
Query: 63 FDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYEK 122
F K + + +L A C KI ++E+ K +K A +KA+++ E
Sbjct: 373 FQICKKIAEKKLRQRKKKMKILKAKC------KKIALKEQCKCEKKA----RKARELNEY 422
Query: 123 EDEKK 127
+KK
Sbjct: 423 CKKKK 427
>gb|AAO41513.1| CG1988-PB, isoform B [Drosophila melanogaster]
gi|28571552|ref|NP_788591.1| CG1988-PB, isoform B
[Drosophila melanogaster]
Length = 578
Score = 36.6 bits (83), Expect = 0.13
Identities = 31/125 (24%), Positives = 55/125 (43%), Gaps = 13/125 (10%)
Query: 6 ATSSIKKSFNVFVTKRIIVQTVKTQTSSPSYQPKSSKPIPFSSTF---DPSNPTAFLKNV 62
A + +K++ V K + + KT + P+ PK++ P P S P P A + +
Sbjct: 463 AKTDVKENIKQEVKKEVKKEIAKTPSPPPAQPPKAANPSPPPSKAAPPSPPKPKANPEGL 522
Query: 63 FDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYEK 122
F K + + +L A C KI ++E+ K +K A +KA+++ E
Sbjct: 523 FQICKKIAEKKLRQRKKKMKILKAKC------KKIALKEQCKCEKKA----RKARELNEY 572
Query: 123 EDEKK 127
+KK
Sbjct: 573 CKKKK 577
>gb|AAH86293.1| LOC495824 protein [Xenopus laevis]
Length = 199
Score = 36.6 bits (83), Expect = 0.13
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 37 QPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAK 96
+ K K I + T S+ + NV D + K+S +F D+ + +K + +++V+++
Sbjct: 59 ESKLGKTIVITKTTPQSDMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERST 118
Query: 97 I-TVEEKMKVDKAAAVAEKKAKDVYEKEDEKKDEE 130
+ V+++ +V+K ++K D E+ E ++EE
Sbjct: 119 LDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEE 153
>emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2099
Score = 36.6 bits (83), Expect = 0.13
Identities = 20/61 (32%), Positives = 33/61 (53%), Gaps = 2/61 (3%)
Query: 64 DFIAKESTSFFDNDSAEKVVLSAICTVKVKKAKITVEEKMKVDKAAAVAEKKAKDVYEKE 123
D+I+KE+ FFD DS ++ + S T + + + +EKMK K +KK D + +
Sbjct: 1445 DYISKENRGFFDEDSMDEFIASE--TEESSMSLTSEDEKMKKKKKRERGKKKGSDDSDSD 1502
Query: 124 D 124
D
Sbjct: 1503 D 1503
>ref|NP_079870.1| zinc finger, matrin type 2 [Mus musculus]
gi|19353222|gb|AAH24881.1| Zinc finger, matrin type 2
[Mus musculus] gi|34785081|gb|AAH56668.1| Zinc finger,
matrin type 2 [Homo sapiens] gi|16550469|dbj|BAB70983.1|
unnamed protein product [Homo sapiens]
gi|59809040|gb|AAH89501.1| Zinc finger, matrin type 2
[Mus musculus] gi|52783533|sp|Q9CPW7|ZMAT2_MOUSE Zinc
finger matrin type 2 gi|52783532|sp|Q96NC0|ZMAT2_HUMAN
Zinc finger matrin type 2 gi|21389511|ref|NP_653324.1|
zinc finger, matrin type 2 [Homo sapiens]
gi|12848619|dbj|BAB28023.1| unnamed protein product [Mus
musculus] gi|12843083|dbj|BAB25852.1| unnamed protein
product [Mus musculus]
Length = 199
Score = 36.2 bits (82), Expect = 0.17
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 37 QPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAK 96
+ K K I + T S + NV D + K+S +F D+ + +K + +++V+++
Sbjct: 59 ESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERST 118
Query: 97 I-TVEEKMKVDKAAAVAEKKAKDVYEKEDEKKDEE 130
+ V+++ +V+K ++K D E+ E ++EE
Sbjct: 119 LDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEE 153
>ref|XP_533161.1| PREDICTED: similar to zinc finger, matrin type 2 [Canis familiaris]
Length = 190
Score = 36.2 bits (82), Expect = 0.17
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 37 QPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAK 96
+ K K I + T S + NV D + K+S +F D+ + +K + +++V+++
Sbjct: 59 ESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERST 118
Query: 97 I-TVEEKMKVDKAAAVAEKKAKDVYEKEDEKKDEE 130
+ V+++ +V+K ++K D E+ E ++EE
Sbjct: 119 LDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEE 153
>ref|XP_535214.1| PREDICTED: similar to Histidyl-tRNA synthetase homolog
(Histidine--tRNA ligase homolog) (HisRS) [Canis
familiaris]
Length = 715
Score = 36.2 bits (82), Expect = 0.17
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 37 QPKSSKPIPFSSTFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVKVKKAK 96
+ K K I + T S + NV D + K+S +F D+ + +K + +++V+++
Sbjct: 584 ESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERST 643
Query: 97 I-TVEEKMKVDKAAAVAEKKAKDVYEKEDEKKDEE 130
+ V+++ +V+K ++K D E+ E ++EE
Sbjct: 644 LDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEE 678
>ref|NP_688286.1| Tn5252, Orf28 [Streptococcus agalactiae 2603V/R]
gi|22534312|gb|AAN00159.1| Tn5252, Orf28 [Streptococcus
agalactiae 2603V/R]
Length = 933
Score = 36.2 bits (82), Expect = 0.17
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 49 TFDPSNPTAFLKNVFDFIAKESTSFFDNDSAEKVVLSAICTVK-VKKAKITVEEKMKVDK 107
TF NP+ LK+ F F ++S FD SAEK V SA VK +KK + T + KV
Sbjct: 127 TFQKENPS--LKSRFQFHQEKS---FDRLSAEKDVSSAKREVKQLKKVQKTKKNSTKVKA 181
Query: 108 AAAVAEKKAKDVYEKEDE 125
+A ++ D+ +ED+
Sbjct: 182 GLGLAASESLDLIAQEDD 199
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.126 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,091,867
Number of Sequences: 2540612
Number of extensions: 8324565
Number of successful extensions: 56413
Number of sequences better than 10.0: 439
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 54505
Number of HSP's gapped (non-prelim): 1838
length of query: 148
length of database: 863,360,394
effective HSP length: 124
effective length of query: 24
effective length of database: 548,324,506
effective search space: 13159788144
effective search space used: 13159788144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC147497.9