BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147497.3 - phase: 0
(382 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP53268.1| putative 22 kDa kafirin cluster; Ty3-Gypsy type [... 139 2e-31
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo] 132 2e-29
emb|CAC44110.1| gag polyprotein [Cicer arietinum] 127 7e-28
gb|AAT81704.1| putative retrotransposon protein [Oryza sativa (j... 114 5e-24
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa (japonica cultivar... 113 1e-23
ref|XP_470061.1| putative polyprotein [Oryza sativa (japonica cu... 113 1e-23
gb|AAP53591.1| putative polyprotein [Oryza sativa (japonica cult... 112 2e-23
ref|XP_475729.1| hypothetical protein [Oryza sativa (japonica cu... 112 2e-23
gb|AAV43991.1| putative polyprotein [Oryza sativa (japonica cult... 112 2e-23
gb|AAP52164.1| putative polyprotein [Oryza sativa (japonica cult... 112 2e-23
emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa (japonica cultivar... 112 2e-23
emb|CAE05184.2| OSJNBa0013A04.21 [Oryza sativa (japonica cultiva... 111 3e-23
gb|AAX96434.1| retrotransposon protein, putative, Ty3-gypsy sub-... 111 3e-23
ref|NP_914275.1| putative polyprotein [Oryza sativa (japonica cu... 111 4e-23
emb|CAE02186.2| OSJNBa0080E14.17 [Oryza sativa (japonica cultiva... 110 5e-23
gb|AAP52382.1| putative polyprotein [Oryza sativa (japonica cult... 110 7e-23
emb|CAD40071.1| OSJNBa0085C10.24 [Oryza sativa (japonica cultiva... 110 9e-23
gb|AAV31366.1| putative polyprotein [Oryza sativa (japonica cult... 110 9e-23
gb|AAT73655.1| putative polyprotein [Oryza sativa (japonica cult... 110 9e-23
gb|AAT47449.1| putative polyprotein [Oryza sativa (japonica cult... 110 9e-23
>gb|AAP53268.1| putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa
(japonica cultivar-group)] gi|37533358|ref|NP_920981.1|
putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza
sativa (japonica cultivar-group)]
gi|21327374|gb|AAM48279.1| Putative 22 kDa kafirin
cluster; Ty3-Gypsy type [Oryza sativa (japonica
cultivar-group)] gi|18767374|gb|AAL79340.1| Putative 22
kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
Length = 1230
Score = 139 bits (349), Expect = 2e-31
Identities = 80/264 (30%), Positives = 142/264 (53%), Gaps = 10/264 (3%)
Query: 28 TGSDGTKM-LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLA 86
T SD + L F + PPTF G +P A++W+ +E+ F M C++ +K+ + T+ML
Sbjct: 62 TKSDANRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQ 121
Query: 87 EEADDWWISLLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEY 146
A +WW + + +TW +FK+ F +YFPE V+ K+ EFLELKQG+ SV EY
Sbjct: 122 SSAFEWWDAHKKSYSER-IFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEY 180
Query: 147 AAKFVELATFYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVNRCRIYQED 206
+F LA F P + + SK +FE+GLR +KR + ++ +F E+V++ ++ +
Sbjct: 181 EIEFSRLARFAPEFVQ--TDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLE-- 236
Query: 207 TKAHYKIMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHK 266
K +++ +R GQ + + P ++G+ + + +R+ + + + H
Sbjct: 237 -KGYHE---QRIEHGQPQKKFKTNNPQNQGRFRGNYSGQMQRKSSENQGRKCPICQGSHV 292
Query: 267 SNVCGRDDRKCFRCGQKGHSLAEC 290
++C +CF CG+ GH+ +C
Sbjct: 293 PSICPNCWGRCFECGEAGHTRYQC 316
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo]
Length = 429
Score = 132 bits (331), Expect = 2e-29
Identities = 96/324 (29%), Positives = 143/324 (43%), Gaps = 40/324 (12%)
Query: 34 KMLENFLRNHPPTFKGRY-DPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDW 92
K L +F + +P TF G DP AQ WL +E IFR M+C E QKV+ ML + W
Sbjct: 58 KHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAW 117
Query: 93 WISLLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVE 152
W + +L D + +TW FK+ F ++F +R K+ EFL L+QGDM+V +Y A+F
Sbjct: 118 WETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDM 177
Query: 153 LATFYPHYSAETAEFSKCIKFENGLRADI-------KRAIGYQQIRVFYELVNRCRIYQE 205
L+ F P A E ++ KF GLR DI + A +R+ +L + R
Sbjct: 178 LSRFAPEMIA--TEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSS 235
Query: 206 DTKAHYKIMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGH 265
T ++R QQ P P + + G+ R +++ ++ GE
Sbjct: 236 KTAGRGSTSGQKRKAEQQPVPVP-----QRNFRPGGEFRSFQQKP-------FEAGE--- 280
Query: 266 KSNVCGRDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCP---------EPKKT 316
R C CG+ H L C G C+ C EGH + +CP +
Sbjct: 281 ----AARGKPLCTTCGK--HHLGRCLFGTRTCFKCRQEGHTADRCPLRVTGIAQNQGAGA 334
Query: 317 RTGGKVFALTGTQTPNEDRLIRGT 340
G+ FA T+ ++ GT
Sbjct: 335 PHQGRAFATNRTEAEKAGTVVTGT 358
>emb|CAC44110.1| gag polyprotein [Cicer arietinum]
Length = 277
Score = 127 bits (318), Expect = 7e-28
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 16/257 (6%)
Query: 6 DDALVAALEAVAQAVQQQPKVETGSDGTKM-----------LENFLRNHPPTFKGRYDPD 54
+D + A+ +A +V Q +T D K L +F R +PP FKG +
Sbjct: 15 NDQMAEAMNNMAASVAAQTAAKTQRDLEKRGREIRAAESRGLVDFRRYNPPKFKGDEGSE 74
Query: 55 GAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKK 114
A +W++E+E+IF ++ C KV + T+ML +A+ WW S ++ V W FK+
Sbjct: 75 KADQWIQEVEKIFDMINCQAGVKVSYATYMLLGDAEYWWRSARLLMGAAHEEVNWESFKR 134
Query: 115 EFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFE 174
+FL +YFP R K +FL+L QG ++V EYAAKF L+ + + E E C +F+
Sbjct: 135 KFLDKYFPMSTRTKLGDDFLKLHQGSLTVGEYAAKFESLSRHFRFFREEIDEPFMCHRFQ 194
Query: 175 NGLRADIKRAIGYQQIRVFYELVNRCRIYQEDTKAHYKIMSERRGKG-----QQNRPKPY 229
+GL+ +I+ ++ I+ F LV +CR ++ + G QNR K
Sbjct: 195 DGLKYEIQDSVLPLGIQRFQALVEKCREVEDMKNKRASRVGNFNSGGPSRATYQNRGKQV 254
Query: 230 SAPADKGKQKMGDDRRP 246
+ P ++ + G RP
Sbjct: 255 AKPYNRPQNNNGGPSRP 271
>gb|AAT81704.1| putative retrotransposon protein [Oryza sativa (japonica
cultivar-group)]
Length = 626
Score = 114 bits (285), Expect = 5e-24
Identities = 89/347 (25%), Positives = 139/347 (39%), Gaps = 34/347 (9%)
Query: 2 TGSSDDALVAALEAVAQAVQQQPKVETGSDGTKMLENFLRNHPPTFKGRYDPDGAQKWLK 61
T + D +A + A + Q G+ G F+R PPTF +P A+ WL+
Sbjct: 14 TQTPDLNTLAGVMATQTQLLQAIANNQGNRGGSSFGEFMRTKPPTFATAEEPMDAKDWLR 73
Query: 62 EIERIFRVMQCSEVQKVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKKEFLGRYF 121
IE+ +++ E KV F + L A DWW + E+D +W F F +
Sbjct: 74 IIEKKLTLVRVREADKVIFAVNQLEGPAGDWWDTYKEAREEDAGEPSWEEFTTAFRDNFM 133
Query: 122 PEDVRGKKKIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFENGLRADI 181
P V KK EF ++QG+ ++ EY +F +LA + A+ E K KF GL ++
Sbjct: 134 PAAVMRMKKNEFRRVRQGNTTIQEYLNRFTQLARYATGDLADEEE--KIDKFIEGLNDEL 191
Query: 182 KRAIGYQQIRVFYELVNRCRIYQEDTKAHYKIMSERRGKGQQNRPKPYSAPADKGKQKMG 241
+ + Q F L+N+ + D K + R+ + NRP + KG G
Sbjct: 192 RGPMIGQDHDSFQSLINKVVRLENDRKV---VEHNRKRRLAMNRPPQVAPQCPKGTTSSG 248
Query: 242 -------DDRRPKRRDAHVEIVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKRGD 294
+R + H + +++ CF CG+
Sbjct: 249 WRPTVVTTNRPTAPSNFHRLVTTQTQAPTPNQAATGSVRPGSCFNCGE------------ 296
Query: 295 IVCYNCNGEGHISSQCPEPKKT--RTGGKVFALTGTQTPNEDRLIRG 339
GH +++CP P KT RTG A+ GT TP R+ G
Sbjct: 297 --------YGHFANKCPHPNKTPIRTGANAMAIHGTATPATGRVEAG 335
Score = 86.7 bits (213), Expect = 1e-15
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 27/258 (10%)
Query: 56 AQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKKE 115
A WL +E++ ++QC++ +KV F +H L A +WW + + +TW F K
Sbjct: 334 AGDWLHVVEKL-ELLQCTDQEKVVFASHQLQGPASEWW-DHFRMNRAEGQPITWEEFTKG 391
Query: 116 FLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFEN 175
F + P V KK EF LKQ D +V EY +F LA + P E + KF
Sbjct: 392 FNKTHIPAGVVALKKREFRTLKQKDRTVAEYLHEFNRLARYAPEDVRTDEERQE--KFLE 449
Query: 176 GLRADIKRAIGYQQIRVFYELVNRCRIYQ------EDTKAHYKIMSERRGKGQQNRPKP- 228
GL+ ++ + F +LV++ + ++ K + E +G Q+ R KP
Sbjct: 450 GLKDELSVTLISHDYVDFQQLVDKAIRLEDKKNRIDNRKRKMTVFQEAQGSSQRQRIKPL 509
Query: 229 -YSAPADKG-------------KQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCGRDD 274
P+ G K + + + A+ ++ + ++ ++N GR+
Sbjct: 510 QIGEPSSAGQGQSQQLNIGGEIKSETNESNKVNIEQANQPVLVQQ--DQSQENNSSGREQ 567
Query: 275 RKCFRCGQKGHSLAECKR 292
+ CF C + GH EC +
Sbjct: 568 QVCFNCYKPGHFARECPK 585
>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa (japonica cultivar-group)]
gi|50930427|ref|XP_474741.1| OSJNBa0059D20.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1470
Score = 113 bits (282), Expect = 1e-23
Identities = 89/343 (25%), Positives = 135/343 (38%), Gaps = 34/343 (9%)
Query: 2 TGSSDDALVAALEAVAQAVQQQPKVETGSDGTKMLENFLRNHPPTFKGRYDPDGAQKWLK 61
T + D +A + A + Q G+ G F+R PPTF +P A+ WL+
Sbjct: 14 TQTPDLNTLAGIMATQTQLLQAIASNQGNRGGSSFGEFMRTKPPTFATAEEPMDAEDWLR 73
Query: 62 EIERIFRVMQCSEVQKVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKKEFLGRYF 121
IE+ +++ E KV F + L A DWW + E+D W F F +
Sbjct: 74 IIEKKLTLVRVREADKVIFAANQLEGPAGDWWDTYKEAREEDAGEPNWEEFTTAFRDNFV 133
Query: 122 PEDVRGKKKIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFENGLRADI 181
P V KK EF +L+QG+ +V EY +F +LA + A+ E K KF GL ++
Sbjct: 134 PAAVMRMKKNEFRKLRQGNTTVQEYLNRFTQLARYATRDLADEEE--KIDKFIEGLNDEL 191
Query: 182 KRAIGYQQIRVFYELVNRCRIYQEDTKAHYKIMSERRGKGQQNRPKPYSAPADKGKQKMG 241
+ + Q F L+N+ + D K + R+ + NRP + KG
Sbjct: 192 RGPMIGQDHDSFQSLINKVVRLENDRKV---VEHNRKRRLAMNRPPQTAPQRPKGTTPSA 248
Query: 242 -------DDRRPKRRDAHVEIVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKRGD 294
R + H + +++ CF CG+
Sbjct: 249 WRPTVVTTSRPAASSNFHRPVTIQNRAPTPNQAATGSVRPGSCFNCGE------------ 296
Query: 295 IVCYNCNGEGHISSQCPEPKKT--RTGGKVFALTGTQTPNEDR 335
GH +++CP P KT RTG A+ GT TP R
Sbjct: 297 --------YGHFANKCPHPNKTPIRTGANATAIHGTATPAAGR 331
>ref|XP_470061.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|40786577|gb|AAR89852.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1312
Score = 113 bits (282), Expect = 1e-23
Identities = 89/343 (25%), Positives = 137/343 (38%), Gaps = 34/343 (9%)
Query: 2 TGSSDDALVAALEAVAQAVQQQPKVETGSDGTKMLENFLRNHPPTFKGRYDPDGAQKWLK 61
T + D +A + A + Q G+ G F+R PPTF +P A+ WL+
Sbjct: 14 TQTPDLTTLAGVMATQTQLLQAIANNQGNRGGSSFGEFMRTKPPTFTTAEEPMDAEDWLR 73
Query: 62 EIERIFRVMQCSEVQKVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKKEFLGRYF 121
IE+ +++ E KV F + L A DWW + E+D W F F +
Sbjct: 74 IIEKKLTLVRVREADKVIFAANQLEGPAGDWWDTYKEAREEDAGEPNWEEFTTAFRDNFV 133
Query: 122 PEDVRGKKKIEFLELKQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFENGLRADI 181
P V KK EF L+QG+ ++ EY +F +LA + A+ E K KF GL ++
Sbjct: 134 PAAVMRMKKNEFRRLRQGNTTIQEYLNRFTQLARYATGDLADGEE--KIDKFIEGLNDEL 191
Query: 182 KRAIGYQQIRVFYELVNRCRIYQEDTKAHYKIMSERRGKGQQNR------PKPYSAPADK 235
+ + Q F L+N+ + D K + R+ + NR +P A + +
Sbjct: 192 RGPMIGQDHDSFQSLINKVVRLENDRKV---VEHNRKRRLAMNRLPQVAPQRPKGATSSE 248
Query: 236 GKQKMGDDRRPKRRDAHVE-IVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKRGD 294
K + RP + + H++ CF CG+
Sbjct: 249 WKPTVVTTNRPATSSNFLRPVTIQNRAPAPHQATTGSVRPGSCFNCGE------------ 296
Query: 295 IVCYNCNGEGHISSQCPEPKKT--RTGGKVFALTGTQTPNEDR 335
GH +++CP P KT RTG A+ GT TP R
Sbjct: 297 --------YGHFANKCPHPNKTPIRTGANATAIHGTTTPAAGR 331
>gb|AAP53591.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37534004|ref|NP_921304.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|20503033|gb|AAM22721.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1784
Score = 112 bits (280), Expect = 2e-23
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 397 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 455
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SVTEY +F LA
Sbjct: 456 HFQATQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVTEYLHEFNNLAR 515
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 516 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 573
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 574 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 633
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 634 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCFEPGHFADKCPKPRR 677
>ref|XP_475729.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50080334|gb|AAT69668.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 371
Score = 112 bits (280), Expect = 2e-23
Identities = 88/319 (27%), Positives = 144/319 (44%), Gaps = 34/319 (10%)
Query: 21 QQQPKVETGSDGT----KMLENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQ 76
Q Q ++ G++ L +FLR PPTF +P A WL IE+ ++QC++ +
Sbjct: 37 QMQNQLNQGNNNAPPPQNKLADFLRVRPPTFSSTTNPVEAGDWLHAIEKKLELLQCTDQE 96
Query: 77 KVRFGTHMLAEEADDWWISLLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLEL 136
KV F +H L A +WW + + +TWA F + F + P V KK EF L
Sbjct: 97 KVVFASHQLQGPASEWW-DHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRAL 155
Query: 137 KQGDMSVTEYAAKFVELATFYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYEL 196
KQ D +VTEY +F LA + P E + KF GL+ ++ + F EL
Sbjct: 156 KQKDRTVTEYLHEFNRLARYAPEDVRTDEERQE--KFLEGLKDELSVMLISHDYEDFQEL 213
Query: 197 VNRC------RIYQEDTKAHYKIMSERRGKGQQNRPKP------YSAPADKGKQ-KMGDD 243
V++ + ++ K + E +G Q+ R KP +SA + +Q +G +
Sbjct: 214 VDKAIRLEDKKNRMDNRKRKMTVFQEAQGSSQRQRIKPLQIGEPFSAGQGQSQQLNIGGE 273
Query: 244 RRPKRRDAHVEIVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKRGDIVCYNCNGE 303
+ + +++ + K V + D+ Q+ +S R VC+NC
Sbjct: 274 IKSETNESN------EVNIKQANQPVPVQQDQS-----QENNSSG---RKQQVCFNCYKP 319
Query: 304 GHISSQCPEPKKTRTGGKV 322
GH + +CP+PK + G+V
Sbjct: 320 GHFARECPKPKHQQPQGQV 338
>gb|AAV43991.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1499
Score = 112 bits (280), Expect = 2e-23
Identities = 81/284 (28%), Positives = 123/284 (42%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR HPPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 95 LAEFLRIHPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 153
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F FL + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 154 HFQATQPEGQPITWARFTAAFLRTHVPAGVMALKKREFRELKQGNRSVMEYLYEFNNLAR 213
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R + ++ ++H
Sbjct: 214 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDSPDFQRLVDKSIRLEVKHKELESHKH 271
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDA-HVEIVCYKCGEKGHKSNVCG 271
++ R + N+ Y+ P G + + R A + V + +S
Sbjct: 272 RLANFRHQQGANQRIHYTNPYPGGSSSQQQQHQQQPRSAPRPQFVVRVPQPQQQQSQQGT 331
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 332 RAPRPPTPAVQPGQGRRDVQGQQRLCFNCFEPGHFADKCPKPRR 375
>gb|AAP52164.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531150|ref|NP_919877.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|22725914|gb|AAN04924.1| Putative polyprotein [Oryza
sativa] gi|20177619|gb|AAM14674.1| Putative polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1433
Score = 112 bits (279), Expect = 2e-23
Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 79 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 137
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
L + + +TWA F +F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 138 HLQATQPERQPITWARFTADFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 197
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 198 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 255
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 256 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 315
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 316 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCYEPGHFADKCPKPRR 359
>emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa (japonica cultivar-group)]
gi|50922727|ref|XP_471724.1| OSJNBa0023J03.1 [Oryza
sativa (japonica cultivar-group)]
Length = 1827
Score = 112 bits (279), Expect = 2e-23
Identities = 87/292 (29%), Positives = 128/292 (43%), Gaps = 22/292 (7%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL IE+ ++QC++ +KV F TH L A WW +
Sbjct: 398 LPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 457
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ VTWA F + F P+ V +KK EF L QG+M+VTEY +F LA
Sbjct: 458 HM-ATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNMTVTEYLHEFNRLAR 516
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVNRCRIYQEDTK----AHY 211
+ P AE K KF GL ++ + F LV++ I QED +
Sbjct: 517 YAPEDVRTDAE--KQEKFMAGLDDELTNQLISGDYADFERLVDKA-IRQEDQRNKMDRKR 573
Query: 212 KIMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG 271
K R +G Q+RP+ P +G G R+ + G G +++ G
Sbjct: 574 KAAQFRSNQGSQHRPR--FTPGQQG----GPTTMIVRQHRPFNSSNFHQGTSGSQNHQGG 627
Query: 272 RDDRKC--------FRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
+ +R + Q + E C+NC GH + +CP+P++
Sbjct: 628 QPNRGAAPRPPMAPAQSAQPAQAKKETGAKPGSCFNCGELGHFADKCPKPRR 679
>emb|CAE05184.2| OSJNBa0013A04.21 [Oryza sativa (japonica cultivar-group)]
gi|21742535|emb|CAD40160.1| OSJNBb0069N01.2 [Oryza
sativa (japonica cultivar-group)]
gi|50922093|ref|XP_471407.1| OSJNBa0013A04.21 [Oryza
sativa (japonica cultivar-group)]
Length = 1717
Score = 111 bits (278), Expect = 3e-23
Identities = 78/283 (27%), Positives = 121/283 (42%), Gaps = 6/283 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 327 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHRLQGPASLWW-D 385
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P +V KK EF ELKQG+ SV EY +F LA
Sbjct: 386 HFQATQPEGQPITWARFTAAFRRTHVPAEVMALKKREFRELKQGNRSVMEYLHEFNNLAR 445
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 446 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 503
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCGR 272
++ R + N+ Y+ P G ++ R + V + +S R
Sbjct: 504 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQPRSAPRPQFVVRVPQPQQQQSQQGTR 563
Query: 273 DDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R Q G + + +C+NC GH + +CP+P++
Sbjct: 564 ATRPPMPAVQPGQGRRDVQGPQRLCFNCFEPGHFADKCPKPRR 606
>gb|AAX96434.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa (japonica cultivar-group)]
Length = 1409
Score = 111 bits (278), Expect = 3e-23
Identities = 77/283 (27%), Positives = 123/283 (43%), Gaps = 6/283 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QC++ +KV F H L A WW +
Sbjct: 84 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCNDEEKVIFAAHQLQGPASLWWDN 143
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
++ + +TWA F F + P V KK EF ELKQG+ SV EY +F +LA
Sbjct: 144 F-QAMQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVMEYLHEFNDLAR 202
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 203 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 260
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCGR 272
++ R + N+ Y+ P G ++ R + V + +S R
Sbjct: 261 RLANFRNQQGANQRIRYTNPYPGGSSSQQQQQQQPRSAPRPQFVVRVPQPQQQQSQQGTR 320
Query: 273 DDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R Q G + + +C+NC GH + +CP+P++
Sbjct: 321 APRPHVPAVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRR 363
>ref|NP_914275.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1521
Score = 111 bits (277), Expect = 4e-23
Identities = 87/292 (29%), Positives = 128/292 (43%), Gaps = 22/292 (7%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL IE+ ++QC++ +KV F TH L A WW +
Sbjct: 92 LPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATHQLQGPASAWWDN 151
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ VTWA F + F P+ V +KK EF L QG+ +VTEY +F LA
Sbjct: 152 HM-ATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVTEYLHEFNRLAR 210
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVNRCRIYQEDTK----AHY 211
+ P AE K KF GL ++ + F LV++ I QED +
Sbjct: 211 YAPEDVRTDAE--KQEKFMAGLDDELTNQLISGDYADFERLVDKA-IRQEDQRNKMDRKR 267
Query: 212 KIMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG 271
K R +G Q+RP+ P +G G R+ + G G +++ G
Sbjct: 268 KAAQFRSNQGSQHRPR--FTPGQQG----GPTTMIVRQHRPFNPSNFHQGTSGSQNHHGG 321
Query: 272 RDDRKC--------FRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
+ +R + GQ + E C+NC GH + +CP+P++
Sbjct: 322 QPNRGAAPRPPMAPAQSGQPAQAKKETGAKPGSCFNCGELGHFADKCPKPRR 373
>emb|CAE02186.2| OSJNBa0080E14.17 [Oryza sativa (japonica cultivar-group)]
gi|32487701|emb|CAE05378.1| OSJNBa0022F16.2 [Oryza
sativa (japonica cultivar-group)]
gi|50930007|ref|XP_474531.1| OSJNBa0080E14.17 [Oryza
sativa (japonica cultivar-group)]
Length = 1494
Score = 110 bits (276), Expect = 5e-23
Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 357 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 415
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 416 HFQATQPEGQPITWARFTAAFRRTHVPAGVMALKKREFRELKQGNRSVMEYLHEFNNLAR 475
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 476 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 533
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 534 RLANFRNQQDANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 593
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 594 RAPRPPTPTVQPGQGRRDAQGPQRLCFNCFEPGHFADKCPKPRR 637
>gb|AAP52382.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|37531586|ref|NP_920095.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|19881766|gb|AAM01167.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 892
Score = 110 bits (275), Expect = 7e-23
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 386 LAEFLRIRPPTFSSSNNPVDALVWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 444
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 445 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 504
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 505 YAPEDVREDEE--KQEKFLAGMDPELSVHLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 562
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 563 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 622
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +CYNC GH + +CP+P++
Sbjct: 623 RAPRPPTPTVQSGQGRRDAQGPQRLCYNCFEPGHFADKCPKPRR 666
>emb|CAD40071.1| OSJNBa0085C10.24 [Oryza sativa (japonica cultivar-group)]
Length = 369
Score = 110 bits (274), Expect = 9e-23
Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 26/278 (9%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L +FLR PPTF +P A WL +E ++QC++ KV F +H L A +WW
Sbjct: 56 LADFLRVRPPTFSSTTNPVEAGDWLHAVEEKLELLQCTDQDKVVFASHQLQGSASEWW-D 114
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F + F + P V KK EF LKQ D +VTEY +F LA
Sbjct: 115 HFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDRTVTEYLHEFNRLAR 174
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVNRCRIYQEDTKAHYK--- 212
+ P E + KF GL+ ++ + F ELV++ I ED K
Sbjct: 175 YAPEDVRTDEERQE--KFLEGLKDELSVMLISHDYEDFQELVDKA-IRLEDKKNRMDNRK 231
Query: 213 ----IMSERRGKGQQNRPKP------YSAPADKGKQ-----KMGDDRRPKRRD---AHVE 254
+ E +G Q+ R KP +SA ++ +Q ++ + D +
Sbjct: 232 RGRIVFQEAQGSSQRQRIKPLQIGESFSAGQEQSQQLGISGEINSETNASNEDNDEQATQ 291
Query: 255 IVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECKR 292
V ++ ++ + N GR+ R CF C + GH + EC +
Sbjct: 292 SVSFQ-QDQSQEDNSNGREQRVCFNCYEPGHFVKECPK 328
>gb|AAV31366.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1826
Score = 110 bits (274), Expect = 9e-23
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 424 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 482
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 483 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 542
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF GL ++ + F LV+ R ++ ++H +
Sbjct: 543 YAPEDVREDEE--KQEKFLAGLDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 600
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 601 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 660
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 661 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRR 704
>gb|AAT73655.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1747
Score = 110 bits (274), Expect = 9e-23
Identities = 80/284 (28%), Positives = 122/284 (42%), Gaps = 7/284 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 345 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVVFAAHQLQGPASLWW-D 403
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 404 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 463
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF GL ++ + F LV+ R ++ ++H +
Sbjct: 464 YAPEDVREDEE--KQEKFLAGLDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 521
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + + + N G
Sbjct: 522 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQNQQGT 581
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKK 315
R R Q G + + +C+NC GH + +CP+P++
Sbjct: 582 RAPRPPTPTVQPGQGRRDAQGQQRLCFNCFEPGHFADKCPKPRR 625
>gb|AAT47449.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1943
Score = 110 bits (274), Expect = 9e-23
Identities = 79/286 (27%), Positives = 123/286 (42%), Gaps = 7/286 (2%)
Query: 36 LENFLRNHPPTFKGRYDPDGAQKWLKEIERIFRVMQCSEVQKVRFGTHMLAEEADDWWIS 95
L FLR PPTF +P A WL + + +QCS+ +KV F H L A WW
Sbjct: 365 LAEFLRIRPPTFSSSNNPVDALDWLHAVGKKLDTVQCSDEEKVIFAAHQLQGPASLWW-D 423
Query: 96 LLPVLEQDDAVVTWAMFKKEFLGRYFPEDVRGKKKIEFLELKQGDMSVTEYAAKFVELAT 155
+ + +TWA F F + P V KK EF ELKQG+ SV EY +F LA
Sbjct: 424 HFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLAR 483
Query: 156 FYPHYSAETAEFSKCIKFENGLRADIKRAIGYQQIRVFYELVN---RCRIYQEDTKAHYK 212
+ P E E K KF G+ ++ + F LV+ R ++ ++H +
Sbjct: 484 YAPEDVREDEE--KQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRLEAKHKELESHKR 541
Query: 213 IMSERRGKGQQNRPKPYSAPADKGKQKMGDDRRPKRRDAHVEIVCYKCGEKGHKSNVCG- 271
++ R + N+ Y+ P G ++ + R A + ++ + N G
Sbjct: 542 RLANFRNQQGANQRVRYTNPYPGGSSSQQQQQQQQPRPAPRPQFVVRVPQQQQQQNQQGT 601
Query: 272 RDDRKCFRCGQKGHSLAECKRGDIVCYNCNGEGHISSQCPEPKKTR 317
R R GQ + +C+NC GH + +CP+P++ +
Sbjct: 602 RAPRPPTPAGQPVQGRRDASGPQRLCFNCFEPGHFADKCPKPRRQK 647
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 624,927,303
Number of Sequences: 2540612
Number of extensions: 27137630
Number of successful extensions: 102838
Number of sequences better than 10.0: 4535
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 3679
Number of HSP's that attempted gapping in prelim test: 80925
Number of HSP's gapped (non-prelim): 16283
length of query: 382
length of database: 863,360,394
effective HSP length: 130
effective length of query: 252
effective length of database: 533,080,834
effective search space: 134336370168
effective search space used: 134336370168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)
Medicago: description of AC147497.3