BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147435.2 + phase: 0
(384 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO11610.1| At2g46500/F11C10.19 [Arabidopsis thaliana] gi|201... 312 1e-83
dbj|BAB10389.1| ubiquitin [Arabidopsis thaliana] gi|15237921|ref... 288 2e-76
dbj|BAD61759.1| putative ubiquitin [Oryza sativa (japonica culti... 271 2e-71
ref|XP_476005.1| putative ubiquitin [Oryza sativa (japonica cult... 268 3e-70
gb|AAT58815.1| putative ubiquitin [Oryza sativa (japonica cultiv... 268 3e-70
ref|XP_465025.1| phosphatidylinositol 3- and 4-kinase-like [Oryz... 267 4e-70
ref|NP_913541.1| unnamed protein product [Oryza sativa (japonica... 225 2e-57
dbj|BAD81385.1| ubiquitin -like [Oryza sativa (japonica cultivar... 225 2e-57
ref|NP_176628.1| ubiquitin family protein [Arabidopsis thaliana]... 154 3e-36
gb|AAF19692.1| F1N19.4 [Arabidopsis thaliana] 154 3e-36
gb|AAR24687.1| At1g64460 [Arabidopsis thaliana] gi|15217655|ref|... 90 1e-16
gb|AAP80690.1| polyubiquitin [Griffithsia japonica] 80 8e-14
gb|AAP80689.1| polyubiquitin [Griffithsia japonica] 80 1e-13
emb|CAI73380.1| ubiquitin, putative [Theileria annulata] 80 1e-13
ref|XP_621945.1| PREDICTED: similar to polyubiquitin [Mus musculus] 79 2e-13
gb|EAL89753.1| polyubiquitin (UbiD), putative [Aspergillus fumig... 79 2e-13
ref|XP_415105.1| PREDICTED: similar to polyubiquitin with 3 Ub d... 79 2e-13
gb|AAD44042.1| polyprotein [Bovine viral diarrhea virus genotype 2] 79 3e-13
dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum] gi|19909906|... 79 3e-13
dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum] gi|19909904|... 79 3e-13
>gb|AAO11610.1| At2g46500/F11C10.19 [Arabidopsis thaliana]
gi|20197828|gb|AAM15268.1| expressed protein
[Arabidopsis thaliana] gi|4415931|gb|AAD20161.1|
expressed protein [Arabidopsis thaliana]
gi|16930425|gb|AAL31898.1| At2g46500/F11C10.19
[Arabidopsis thaliana] gi|25409008|pir||F84903 probable
ubiquitin [imported] - Arabidopsis thaliana
gi|42571253|ref|NP_973700.1| phosphatidylinositol 3- and
4-kinase family protein / ubiquitin family protein
[Arabidopsis thaliana] gi|18407090|ref|NP_566076.1|
phosphatidylinositol 3- and 4-kinase family protein /
ubiquitin family protein [Arabidopsis thaliana]
Length = 566
Score = 312 bits (800), Expect = 1e-83
Identities = 182/358 (50%), Positives = 246/358 (67%), Gaps = 34/358 (9%)
Query: 1 MSSAGVSTLSPVDPTEPLLSPNAFHLPSHLSFEDKSISIFLSVSGSLTPFRVMEWDTIES 60
MSSAGV+ LSPV +EPL+ P S+ D +I I+L++ GS+ P RV+E D+IES
Sbjct: 1 MSSAGVA-LSPVR-SEPLIMPLVRANSCLDSYPDDTIMIYLTLPGSVIPMRVLESDSIES 58
Query: 61 VKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVK 120
VK +IQ F+ QKLV+ GRELARS++ ++DYGV++GN+LHL++KLSDLQ+++VK
Sbjct: 59 VKLRIQSYRG--FVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVK 116
Query: 121 TSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHN 180
T+ GK F VERGR++ Y+K++I+KK F D +EQE++ GE+LEDQ LI+DIC +++
Sbjct: 117 TTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDIC-RND 175
Query: 181 DAVVHLFVRKRNAKVHRRP----FELSIVTTDLADTKTDDVFENSCGRKFEVGGVEDTDA 236
D+V+HL VR R+AKV +P FELSIV D K GR +A
Sbjct: 176 DSVLHLLVR-RSAKVRVKPVEKNFELSIVAPQAKDKK---------GR----------EA 215
Query: 237 IQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGAYF 296
P+KL LEP++VN K ++ V+++M+ SA DGL S P+ S+EGTGGAYF
Sbjct: 216 KSIVPPKKLS-----LEPVVVNSKAKVPLVVKDMIQSASDGLKSGNSPVRSSEGTGGAYF 270
Query: 297 MLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
M +G K+V VFKPIDEEPMA NNP+ LPLS +GEGLKKGT VG+GA REVAAY+L+
Sbjct: 271 MQGPSGNKFVGVFKPIDEEPMAENNPQGLPLSPNGEGLKKGTKVGEGALREVAAYILD 328
>dbj|BAB10389.1| ubiquitin [Arabidopsis thaliana] gi|15237921|ref|NP_197812.1|
phosphatidylinositol 3- and 4-kinase family protein /
ubiquitin family protein [Arabidopsis thaliana]
Length = 574
Score = 288 bits (737), Expect = 2e-76
Identities = 155/321 (48%), Positives = 215/321 (66%), Gaps = 20/321 (6%)
Query: 34 DKSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTL 93
D I +FL+++GS+ P RVME D+I SVK +IQ + F KQKL+Y GRE++R+D+
Sbjct: 30 DDPILVFLTIAGSVIPKRVMESDSIASVKLRIQSIKG--FFVKKQKLLYDGREVSRNDSQ 87
Query: 94 LKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDD 153
++DYG+ DG +LHL+I+LSDLQ I+V+T GKEF VER R+V Y+K++IA KEK+
Sbjct: 88 IRDYGLADGKLLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGI 147
Query: 154 LEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTK 213
+ EL +GE L+DQ+LI D+C ++ D V+HL + K +AKV +P K
Sbjct: 148 PRDHELTLDGEELDDQRLITDLC-QNGDNVIHLLISK-SAKVRAKPVG-----------K 194
Query: 214 TDDVFENSCGRKFEVGGVEDTDAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNS 273
+VF K V G + A P+ +F +EP IVNP+I+L +++ +++S
Sbjct: 195 DFEVFIEDVNHKHNVDGRRGKNISSEAKPK-----EFFVEPFIVNPEIKLPILLKELISS 249
Query: 274 AYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEG 333
+GL PI S++G+GGAYFM D +G KYVSVFKPIDEEPMAVNNP P+S+DGEG
Sbjct: 250 TLEGLEKGNGPIRSSDGSGGAYFMQDPSGHKYVSVFKPIDEEPMAVNNPHGQPVSVDGEG 309
Query: 334 LKKGTIVGQGAFREVAAYVLE 354
LKKGT VG+GA REVAAY+L+
Sbjct: 310 LKKGTQVGEGAIREVAAYILD 330
>dbj|BAD61759.1| putative ubiquitin [Oryza sativa (japonica cultivar-group)]
gi|54290883|dbj|BAD61543.1| putative ubiquitin [Oryza
sativa (japonica cultivar-group)]
Length = 568
Score = 271 bits (693), Expect = 2e-71
Identities = 164/361 (45%), Positives = 237/361 (65%), Gaps = 30/361 (8%)
Query: 1 MSSAGVSTLSPVDPTEPLLSPNAF------HLPSHLSFEDKSISIFLSVSGSLT-PFRVM 53
MSSA ++ V+ E L P F H S +D SI IFL+V G+ P V+
Sbjct: 1 MSSAAIAISPMVE--EFALLPICFDGSRSPHCLSGSQLQD-SIIIFLAVPGAPPMPMSVL 57
Query: 54 EWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSD 113
++I SVK +IQR + F+ NKQ+LV G ELAR++ +KDYG+ DGNVLHL+I+L+D
Sbjct: 58 GSESIASVKLRIQRFKG--FVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLAD 115
Query: 114 LQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLID 173
L+LIN++T+SGK+F FQV++ R+VKY+K ++A + + D E+ +L C+G+ LED +LI
Sbjct: 116 LRLINIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDE-DLGEDHKLECDGKELEDHQLIA 174
Query: 174 DICCKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDVFENSCGRKFEVGGVED 233
DI K +DAV+HLF+RK AK+ + + V T + + +++ +
Sbjct: 175 DIS-KKDDAVIHLFIRKP-AKLRTQQVDKDTVVTVVTPQEKENL-------------QNE 219
Query: 234 TDAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGG 293
A+ A P R L+EPIIVN K++L+ + M++SA GL + Y P+ SAEG+GG
Sbjct: 220 AHAVNPAKPAGA--RPALVEPIIVNHKVKLSLEVMRMISSAIAGLENGYLPVMSAEGSGG 277
Query: 294 AYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVL 353
YFM D++G+K ++VFKP DEEPMA NNPR LP+S DGEG+K+GT+VG+GAFREVAAY+L
Sbjct: 278 VYFMQDASGEKNIAVFKPRDEEPMAKNNPRGLPVSTDGEGMKRGTLVGEGAFREVAAYIL 337
Query: 354 E 354
+
Sbjct: 338 D 338
>ref|XP_476005.1| putative ubiquitin [Oryza sativa (japonica cultivar-group)]
gi|47777373|gb|AAT38007.1| putative ubiquitin [Oryza
sativa (japonica cultivar-group)]
Length = 612
Score = 268 bits (684), Expect = 3e-70
Identities = 168/360 (46%), Positives = 220/360 (60%), Gaps = 38/360 (10%)
Query: 2 SSAGVSTLSPVDPTEPLLSP----NAFHLPSHLSFEDKSISIFLSVSG-SLTPFRVMEWD 56
++AG +TL + LL+ N P H + E SI I+L+ G S+ P RVM D
Sbjct: 4 TAAGGATLCAAREEQELLATRLNVNGIR-PPHCAAE--SILIYLTAPGLSMMPMRVMASD 60
Query: 57 TIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQL 116
+I SVK ++Q + F+ KQKLV+ GRELAR+D+ + DYGV+ GNVLHL+I++SDL+L
Sbjct: 61 SIASVKLRVQTSKG--FVVRKQKLVFDGRELARNDSRIMDYGVSHGNVLHLVIRISDLRL 118
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I V+T G +F F+VE GR V Y+K++IAK DD LV GE L+D LI D+C
Sbjct: 119 ITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNSTHDDD--HHSLVLQGEVLDDAHLIHDVC 176
Query: 177 CKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDVFENSCGRKFEVGGV--EDT 234
+ + AV+HL V R+AK+ RP + R FEV V
Sbjct: 177 -RTDGAVIHLLVH-RSAKLAARPVD----------------------RDFEVSIVARNRN 212
Query: 235 DAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGA 294
A A P RDF +EP+IVNPK L VI N+V + G+ PI S+EGTGGA
Sbjct: 213 AAADAAQPTLHLQRDFAIEPVIVNPKAALPPVIENLVGAVLAGMEKGNAPIMSSEGTGGA 272
Query: 295 YFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
YFM D++GQ++V+VFKP+DEEPMA NNPR LP S GEGLKKGT VG+GA REVAAY+L+
Sbjct: 273 YFMQDASGQEHVAVFKPVDEEPMAANNPRGLPPSPTGEGLKKGTRVGEGAIREVAAYILD 332
>gb|AAT58815.1| putative ubiquitin [Oryza sativa (japonica cultivar-group)]
Length = 586
Score = 268 bits (684), Expect = 3e-70
Identities = 168/360 (46%), Positives = 220/360 (60%), Gaps = 38/360 (10%)
Query: 2 SSAGVSTLSPVDPTEPLLSP----NAFHLPSHLSFEDKSISIFLSVSG-SLTPFRVMEWD 56
++AG +TL + LL+ N P H + E SI I+L+ G S+ P RVM D
Sbjct: 4 TAAGGATLCAAREEQELLATRLNVNGIR-PPHCAAE--SILIYLTAPGLSMMPMRVMASD 60
Query: 57 TIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQL 116
+I SVK ++Q + F+ KQKLV+ GRELAR+D+ + DYGV+ GNVLHL+I++SDL+L
Sbjct: 61 SIASVKLRVQTSKG--FVVRKQKLVFDGRELARNDSRIMDYGVSHGNVLHLVIRISDLRL 118
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I V+T G +F F+VE GR V Y+K++IAK DD LV GE L+D LI D+C
Sbjct: 119 ITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNSTHDDD--HHSLVLQGEVLDDAHLIHDVC 176
Query: 177 CKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDVFENSCGRKFEVGGV--EDT 234
+ + AV+HL V R+AK+ RP + R FEV V
Sbjct: 177 -RTDGAVIHLLVH-RSAKLAARPVD----------------------RDFEVSIVARNRN 212
Query: 235 DAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGA 294
A A P RDF +EP+IVNPK L VI N+V + G+ PI S+EGTGGA
Sbjct: 213 AAADAAQPTLHLQRDFAIEPVIVNPKAALPPVIENLVGAVLAGMEKGNAPIMSSEGTGGA 272
Query: 295 YFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
YFM D++GQ++V+VFKP+DEEPMA NNPR LP S GEGLKKGT VG+GA REVAAY+L+
Sbjct: 273 YFMQDASGQEHVAVFKPVDEEPMAANNPRGLPPSPTGEGLKKGTRVGEGAIREVAAYILD 332
>ref|XP_465025.1| phosphatidylinositol 3- and 4-kinase-like [Oryza sativa (japonica
cultivar-group)] gi|47847959|dbj|BAD21748.1|
phosphatidylinositol 3- and 4-kinase-like [Oryza sativa
(japonica cultivar-group)] gi|47847951|dbj|BAD21741.1|
phosphatidylinositol 3- and 4-kinase-like [Oryza sativa
(japonica cultivar-group)]
Length = 565
Score = 267 bits (683), Expect = 4e-70
Identities = 162/358 (45%), Positives = 231/358 (64%), Gaps = 32/358 (8%)
Query: 1 MSSAGVSTLSPVDPTEPLLSPNAF--HLPSHLSFEDKSISIFLSVSG-SLTPFRVMEWDT 57
MSSAG++TLSP LL F H L D SI IFL++ G + P RV+ D+
Sbjct: 1 MSSAGIATLSP------LLDQFCFAPHGEPRLQQLD-SIVIFLAMPGVAPMPMRVLHSDS 53
Query: 58 IESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLI 117
+ SVK +IQ+ + F+T KQ+LV++G EL+ +++ ++DYG+TDGNVLHL+++L+DL+ I
Sbjct: 54 VASVKLRIQQFKG--FVTTKQRLVFSGHELSLNNSHVRDYGLTDGNVLHLVVRLADLRAI 111
Query: 118 NVKTSSGKEFSFQVERGRDVKYIKRRI-AKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
+++T++GK+F FQVE +V Y+K ++ A+ +Q L++Q LV +GE LED +LI DI
Sbjct: 112 SIETANGKKFQFQVESCCNVGYLKDKLSAESGQQLGSLKDQRLVFDGEELEDNQLIADIS 171
Query: 177 CKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDVFENSCGRKFEVGGVEDTDA 236
K AV+HLF+R R AKV + + V T + D++ TDA
Sbjct: 172 -KKGAAVIHLFIR-RPAKVQTQQGDKETVVTVVTPKDNDNL---------------QTDA 214
Query: 237 IQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNMVNSAYDGLASEYYPIGSAEGTGGAYF 296
+ A P K + +EPII N K++L+ + M+ S G+ + Y P+ S EG+GG YF
Sbjct: 215 LNLAKPAK--GKPAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYF 272
Query: 297 MLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLE 354
M DS+G+ V+VFKPIDEEPMA NNPR LPLS DGEGLK+GT VG+GA REVAAY+L+
Sbjct: 273 MKDSSGESNVAVFKPIDEEPMAKNNPRGLPLSTDGEGLKRGTRVGEGALREVAAYILD 330
>ref|NP_913541.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 588
Score = 225 bits (574), Expect = 2e-57
Identities = 128/324 (39%), Positives = 192/324 (58%), Gaps = 42/324 (12%)
Query: 39 IFLSVSG-SLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDY 97
++L+V G L +V+E D++ +VK +IQ + F+ Q+LV+ GREL+R+D+ ++DY
Sbjct: 60 LYLAVPGVPLAKMQVLESDSVAAVKLRIQNSKG--FVARNQRLVFEGRELSRNDSHIRDY 117
Query: 98 GVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQ 157
GV G+VLHL+I+LSD + V+T G++F FQV++ R+ +Y+K+ I++ + + + E
Sbjct: 118 GVRYGSVLHLVIRLSDPRRTAVRTVYGRKFKFQVDQRRNARYMKQEISRNVESPNGIGES 177
Query: 158 ELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDV 217
+ NGE+L++ LI IC E + TD K+++
Sbjct: 178 MTLVNGEKLDESTLISTIC------------------------ETNTSDTDFLANKSENF 213
Query: 218 FENSCGRKFE-------VGGVEDTDAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNM 270
N FE +G D + P L+EP++VNP + L I M
Sbjct: 214 NGNEIEESFEQLSISSDIGNNLQFDDAKEKYP--------LIEPVLVNPSVTLTPKITGM 265
Query: 271 VNSAYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLD 330
+ + GL E+ P+ S+EGTGG YFMLDS+GQ+YV+VFKPI+EEPMA +NP PLS D
Sbjct: 266 IEATLAGLEMEHTPVMSSEGTGGVYFMLDSSGQEYVAVFKPINEEPMAKDNPNGYPLSSD 325
Query: 331 GEGLKKGTIVGQGAFREVAAYVLE 354
GEGLK+GT VG+GAFREVAAY+L+
Sbjct: 326 GEGLKRGTRVGEGAFREVAAYILD 349
>dbj|BAD81385.1| ubiquitin -like [Oryza sativa (japonica cultivar-group)]
Length = 567
Score = 225 bits (574), Expect = 2e-57
Identities = 128/324 (39%), Positives = 192/324 (58%), Gaps = 42/324 (12%)
Query: 39 IFLSVSG-SLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDY 97
++L+V G L +V+E D++ +VK +IQ + F+ Q+LV+ GREL+R+D+ ++DY
Sbjct: 39 LYLAVPGVPLAKMQVLESDSVAAVKLRIQNSKG--FVARNQRLVFEGRELSRNDSHIRDY 96
Query: 98 GVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQ 157
GV G+VLHL+I+LSD + V+T G++F FQV++ R+ +Y+K+ I++ + + + E
Sbjct: 97 GVRYGSVLHLVIRLSDPRRTAVRTVYGRKFKFQVDQRRNARYMKQEISRNVESPNGIGES 156
Query: 158 ELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKTDDV 217
+ NGE+L++ LI IC E + TD K+++
Sbjct: 157 MTLVNGEKLDESTLISTIC------------------------ETNTSDTDFLANKSENF 192
Query: 218 FENSCGRKFE-------VGGVEDTDAIQRAVPRKLPDRDFLLEPIIVNPKIELASVIRNM 270
N FE +G D + P L+EP++VNP + L I M
Sbjct: 193 NGNEIEESFEQLSISSDIGNNLQFDDAKEKYP--------LIEPVLVNPSVTLTPKITGM 244
Query: 271 VNSAYDGLASEYYPIGSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLD 330
+ + GL E+ P+ S+EGTGG YFMLDS+GQ+YV+VFKPI+EEPMA +NP PLS D
Sbjct: 245 IEATLAGLEMEHTPVMSSEGTGGVYFMLDSSGQEYVAVFKPINEEPMAKDNPNGYPLSSD 304
Query: 331 GEGLKKGTIVGQGAFREVAAYVLE 354
GEGLK+GT VG+GAFREVAAY+L+
Sbjct: 305 GEGLKRGTRVGEGAFREVAAYILD 328
>ref|NP_176628.1| ubiquitin family protein [Arabidopsis thaliana]
gi|46359843|gb|AAS88785.1| At1g64470 [Arabidopsis
thaliana] gi|45773788|gb|AAS76698.1| At1g64470
[Arabidopsis thaliana]
Length = 213
Score = 154 bits (390), Expect = 3e-36
Identities = 77/156 (49%), Positives = 114/156 (72%), Gaps = 3/156 (1%)
Query: 35 KSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLL 94
KS+ +FLSVSGS P ++E D+I VK +IQ C F +QKLV++GRELAR+ + +
Sbjct: 33 KSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNG--FRVRRQKLVFSGRELARNASRV 90
Query: 95 KDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDL 154
KDYGVT G+VLHL++KL D L+ V T+ GK F F V+R R+V Y+K+RI+K+ K F ++
Sbjct: 91 KDYGVTGGSVLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEV 150
Query: 155 EEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRK 190
++QE++ GE+L+D ++ID I CK ++V+HL V+K
Sbjct: 151 DDQEILFKGEKLDDNRIIDGI-CKDGNSVIHLLVKK 185
>gb|AAF19692.1| F1N19.4 [Arabidopsis thaliana]
Length = 505
Score = 154 bits (390), Expect = 3e-36
Identities = 77/156 (49%), Positives = 114/156 (72%), Gaps = 3/156 (1%)
Query: 35 KSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLL 94
KS+ +FLSVSGS P ++E D+I VK +IQ C F +QKLV++GRELAR+ + +
Sbjct: 33 KSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNG--FRVRRQKLVFSGRELARNASRV 90
Query: 95 KDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDL 154
KDYGVT G+VLHL++KL D L+ V T+ GK F F V+R R+V Y+K+RI+K+ K F ++
Sbjct: 91 KDYGVTGGSVLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEV 150
Query: 155 EEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRK 190
++QE++ GE+L+D ++ID I CK ++V+HL V+K
Sbjct: 151 DDQEILFKGEKLDDNRIIDGI-CKDGNSVIHLLVKK 185
Score = 99.0 bits (245), Expect = 2e-19
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 291 TGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAA 350
TGG Y M DS+G YVSVFKP+DEEPMAVNNP+ LP+S DG+GLK+GT VG+GA REVAA
Sbjct: 199 TGGTYLMQDSSGLNYVSVFKPMDEEPMAVNNPQQLPVSSDGQGLKRGTRVGEGATREVAA 258
Query: 351 YVLETQRV-VTSLSISVLSF 369
Y+L+ + + S+S V+ F
Sbjct: 259 YLLDHPKSGLRSVSKEVMGF 278
>gb|AAR24687.1| At1g64460 [Arabidopsis thaliana] gi|15217655|ref|NP_176627.1|
phosphatidylinositol 3- and 4-kinase family protein
[Arabidopsis thaliana]
Length = 301
Score = 89.7 bits (221), Expect = 1e-16
Identities = 46/74 (62%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 297 MLDSTGQKYVSVFKPIDEEPMAVNNPRCLPLSLDGEGLKKGTIVGQGAFREVAAYVLETQ 356
M DS+G YVSVFKP+DEEPMAVNNP+ LP+S DG+GLK+GT VG+GA REVAAY+L+
Sbjct: 1 MQDSSGLNYVSVFKPMDEEPMAVNNPQQLPVSSDGQGLKRGTRVGEGATREVAAYLLDHP 60
Query: 357 RV-VTSLSISVLSF 369
+ + S+S V+ F
Sbjct: 61 KSGLRSVSKEVMGF 74
>gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
Length = 195
Score = 80.5 bits (197), Expect = 8e-14
Identities = 57/174 (32%), Positives = 95/174 (53%), Gaps = 8/174 (4%)
Query: 22 NAFHL-PSHLSFEDKSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKL 80
N+ HL P H F I + +++G V DTIE+VK KIQ E +P ++Q+L
Sbjct: 29 NSSHLHPKHTLFIVMQIFV-KTLTGKTITLEVESSDTIENVKTKIQDKEGIP--PDQQRL 85
Query: 81 VYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYI 140
++AG++L TL DY + + LHL+++L I VKT +GK + +VE ++ +
Sbjct: 86 IFAGKQLEDGRTL-SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 144
Query: 141 KRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKRNAK 194
K +I KE D +Q L+ G++LED + + D + ++ +HL +R R +
Sbjct: 145 KTKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLRGGQ 195
>gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
Length = 246
Score = 80.1 bits (196), Expect = 1e-13
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 8/171 (4%)
Query: 22 NAFHL-PSHLSFEDKSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKL 80
N+ HL P H F I + +++G V DTIE+VK KIQ E +P ++Q+L
Sbjct: 4 NSSHLHPKHTLFIVMQIFV-KTLTGKTITLEVESSDTIENVKTKIQDKEGIP--PDQQRL 60
Query: 81 VYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYI 140
++AG++L TL DY + + LHL+++L I VKT +GK + +VE ++ +
Sbjct: 61 IFAGKQLEDGRTL-SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENV 119
Query: 141 KRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
K +I KE D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 120 KTKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 167
Score = 77.8 bits (190), Expect = 5e-13
Identities = 50/153 (32%), Positives = 86/153 (55%), Gaps = 6/153 (3%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 100 TLTGKTITLEVESSDTIENVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 156
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 157 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPD--QQRLIF 214
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKRNAK 194
G++LED + + D + ++ +HL +R R +
Sbjct: 215 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLRGGQ 246
Score = 39.3 bits (90), Expect = 0.20
Identities = 28/94 (29%), Positives = 49/94 (51%), Gaps = 3/94 (3%)
Query: 98 GVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQ 157
G + + LH L + I VKT +GK + +VE ++ +K +I KE D +Q
Sbjct: 1 GTRNSSHLHPKHTLFIVMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPD--QQ 58
Query: 158 ELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
L+ G++LED + + D + ++ +HL +R R
Sbjct: 59 RLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 91
>emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
Length = 159
Score = 80.1 bits (196), Expect = 1e-13
Identities = 52/154 (33%), Positives = 87/154 (55%), Gaps = 6/154 (3%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 63
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIF 121
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKRNAKV 195
G++LED + + D + ++ +HL +R R KV
Sbjct: 122 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLRGGKV 154
Score = 37.4 bits (85), Expect = 0.77
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>ref|XP_621945.1| PREDICTED: similar to polyubiquitin [Mus musculus]
Length = 229
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/153 (33%), Positives = 86/153 (55%), Gaps = 6/153 (3%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 7 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 63
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIF 121
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKRNAK 194
G++LED + + D + ++ +HL +R R K
Sbjct: 122 AGKQLEDGRTLSDYNIQ-KESTLHLVLRMRGGK 153
Score = 76.3 bits (186), Expect = 2e-12
Identities = 49/150 (32%), Positives = 86/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 83 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 139
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL++++ + I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 140 ESTLHLVLRMRGGKQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIF 197
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 198 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 226
Score = 37.4 bits (85), Expect = 0.77
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>gb|EAL89753.1| polyubiquitin (UbiD), putative [Aspergillus fumigatus Af293]
Length = 314
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/158 (32%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 34 DKSISIFLSVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTL 93
D I++ +++G V DTI++VK KIQ E +P ++Q+L++AG++L TL
Sbjct: 84 DSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP--PDQQRLIFAGKQLEDGRTL 141
Query: 94 LKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDD 153
DY + + LHL+++L I VKT +GK + +VE + +K +I KE D
Sbjct: 142 -SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD 200
Query: 154 LEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
+Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 201 --QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 235
Score = 75.5 bits (184), Expect = 3e-12
Identities = 49/150 (32%), Positives = 84/150 (55%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 168 TLTGKTITLEVESSDTIDNVKSKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 224
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE + +K +I KE D +Q L+
Sbjct: 225 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD--QQRLIF 282
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 283 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 311
Score = 70.9 bits (172), Expect = 6e-11
Identities = 49/159 (30%), Positives = 86/159 (53%), Gaps = 15/159 (9%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTI++VK KIQ E +P ++Q+L++AG++L T L DY +
Sbjct: 7 TLTGKTITLEVESSDTIDNVKSKIQDKEGIP--PDQQRLIFAGKQLEDGRT-LSDYNIQK 63
Query: 102 GNVLHLIIKL---------SDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFD 152
+ LHL+++L +D + VKT +GK + +VE + +K +I KE
Sbjct: 64 ESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 123
Query: 153 DLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 124 D--QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 159
Score = 37.4 bits (85), Expect = 0.77
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE + +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKRNAKVHRRPFELSIVTTDLADTKT 214
+ ++ +HL +R R P + I KT
Sbjct: 61 IQ-KESTLHLVLRLRGGMQIWSPADSLITVVKTLTGKT 97
>ref|XP_415105.1| PREDICTED: similar to polyubiquitin with 3 Ub domains [Gallus
gallus]
Length = 399
Score = 79.0 bits (193), Expect = 2e-13
Identities = 53/159 (33%), Positives = 91/159 (56%), Gaps = 7/159 (4%)
Query: 34 DKSISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDT 92
D ++ IF+ +++G V DTIE+VK KIQ E +P ++Q+L++AG++L T
Sbjct: 168 DTNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRT 225
Query: 93 LLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFD 152
L DY + + LHL+++L I VKT +GK + +VE ++ +K +I KE
Sbjct: 226 L-SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 284
Query: 153 DLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 285 D--QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 320
Score = 76.6 bits (187), Expect = 1e-12
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIE+VK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 253 TLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 309
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 310 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD--QQRLIF 367
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 368 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 396
>gb|AAD44042.1| polyprotein [Bovine viral diarrhea virus genotype 2]
Length = 432
Score = 78.6 bits (192), Expect = 3e-13
Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 21 PNAFHLPSHLSFEDKSISIFL-SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQK 79
P+A + + ++ + IF+ +++G V DTIE+VK KIQ E +P ++Q+
Sbjct: 208 PDATIVVEGVKYQVGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP--PDQQR 265
Query: 80 LVYAGRELARSDTLLKDYGVTDGNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKY 139
L++AG++L TL DY + + LHL+++L I VKT +GK + +VE ++
Sbjct: 266 LIFAGKQLEDGRTL-SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN 324
Query: 140 IKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
+K +I KE D +Q L+ G++LED + + D + ++ +HL +R R
Sbjct: 325 VKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 373
>dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum] gi|19909906|dbj|BAB87826.1|
polyubiquitin [Physarum polycephalum]
Length = 305
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 83 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 139
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 140 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 197
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 198 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 226
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 7 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 63
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 121
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 122 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 150
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 159 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 215
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 273
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 274 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 302
Score = 37.7 bits (86), Expect = 0.59
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
+ ++ +HL +R R
Sbjct: 61 IQ-KESTLHLVLRLR 74
>dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum] gi|19909904|dbj|BAB87825.1|
polyubiquitin [Physarum polycephalum]
Length = 305
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 83 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 139
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 140 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 197
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 198 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 226
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 159 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIQK 215
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 216 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 273
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 274 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 302
Score = 78.2 bits (191), Expect = 4e-13
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Query: 42 SVSGSLTPFRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDTLLKDYGVTD 101
+++G V DTIESVK KIQ E +P ++Q+L++AG++L TL DY +
Sbjct: 7 TLTGKTITLEVESSDTIESVKTKIQDKEGIP--PDQQRLIFAGKQLEDGRTL-SDYNIHK 63
Query: 102 GNVLHLIIKLSDLQLINVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVC 161
+ LHL+++L I VKT +GK + +VE ++ +K +I KE D +Q L+
Sbjct: 64 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIF 121
Query: 162 NGERLEDQKLIDDICCKHNDAVVHLFVRKR 191
G++LED + + D + ++ +HL +R R
Sbjct: 122 AGKQLEDGRTLSDYNIQ-KESTLHLVLRLR 150
Score = 40.4 bits (93), Expect = 0.091
Identities = 25/75 (33%), Positives = 42/75 (55%), Gaps = 3/75 (4%)
Query: 117 INVKTSSGKEFSFQVERGRDVKYIKRRIAKKEKQFDDLEEQELVCNGERLEDQKLIDDIC 176
I VKT +GK + +VE ++ +K +I KE D +Q L+ G++LED + + D
Sbjct: 3 IFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYN 60
Query: 177 CKHNDAVVHLFVRKR 191
H ++ +HL +R R
Sbjct: 61 I-HKESTLHLVLRLR 74
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.137 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 629,176,135
Number of Sequences: 2540612
Number of extensions: 26590923
Number of successful extensions: 69303
Number of sequences better than 10.0: 891
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 549
Number of HSP's that attempted gapping in prelim test: 64022
Number of HSP's gapped (non-prelim): 2327
length of query: 384
length of database: 863,360,394
effective HSP length: 130
effective length of query: 254
effective length of database: 533,080,834
effective search space: 135402531836
effective search space used: 135402531836
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)
Medicago: description of AC147435.2