BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147179.8 + phase: 0
(307 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191478.2| F-box family protein [Arabidopsis thaliana] 76 1e-12
ref|NP_189327.2| F-box family protein [Arabidopsis thaliana] 75 2e-12
ref|NP_680683.1| F-box family protein [Arabidopsis thaliana] 75 2e-12
ref|NP_177121.1| F-box family protein [Arabidopsis thaliana] gi|... 75 3e-12
emb|CAB91589.1| putative protein [Arabidopsis thaliana] gi|11357... 75 3e-12
ref|NP_974590.1| F-box family protein [Arabidopsis thaliana] 73 9e-12
ref|NP_193959.2| F-box family protein [Arabidopsis thaliana] 73 9e-12
emb|CAB88303.1| putative protein [Arabidopsis thaliana] gi|15231... 72 2e-11
emb|CAB86928.1| putative protein [Arabidopsis thaliana] gi|11357... 72 3e-11
ref|NP_191459.2| F-box family protein [Arabidopsis thaliana] 72 3e-11
gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|1459614... 71 3e-11
dbj|BAB09899.1| unnamed protein product [Arabidopsis thaliana] g... 71 5e-11
emb|CAB91586.1| putative protein [Arabidopsis thaliana] gi|15231... 70 8e-11
emb|CAB86943.1| putative protein [Arabidopsis thaliana] gi|11357... 70 8e-11
dbj|BAB11678.1| unnamed protein product [Arabidopsis thaliana] g... 70 1e-10
gb|AAF34427.1| unknown protein [Oryza sativa] 70 1e-10
gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|1841414... 69 2e-10
ref|NP_177997.1| F-box family protein [Arabidopsis thaliana] gi|... 69 2e-10
gb|AAX96212.1| F-box domain, putative [Oryza sativa (japonica cu... 68 3e-10
dbj|BAD94200.1| putative protein [Arabidopsis thaliana] 68 4e-10
>ref|NP_191478.2| F-box family protein [Arabidopsis thaliana]
Length = 388
Score = 75.9 bits (185), Expect = 1e-12
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 44/332 (13%)
Query: 7 KHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR 66
K D +D +S+LP+ +L +LS L EA T ++ RWR L +P L L + + R
Sbjct: 4 KRMDSGSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDR 63
Query: 67 -----------IKSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNV 115
KSF FV R++ L+ + PL C+ DP + V + V
Sbjct: 64 PKMGRRKRLELRKSFKLFVDRVMALQG-NAPLKKFSLRCKIGSDPSRVNGWVLKVLDRGV 122
Query: 116 EKLRVHACCDFQH-FSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESF 174
E+L ++ ++++ TL SL + TDE LP L TL L +
Sbjct: 123 EELDLYIASEYEYPLPPKVLMTKTLVSLKV----SGTDEFTIDVGEFFLPKLKTLHLSAI 178
Query: 175 AFCVGDDG---CAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYS-- 229
+F GD+G A+ SA ++L+ L+++ E +SS +L ++I + + +
Sbjct: 179 SF--GDEGGPPFAKLISACHALEELVMIKMMWDYWEFCSVSSPSLKRVSIDCENIDENPK 236
Query: 230 TVELSTPSLFTFDFVCYEGIPVLKLCRSKINLSSVKHVNIEVRMWTDYADASLVLLN--- 286
+V TP+L +F + + K+N S+ +I +RM D + L+N
Sbjct: 237 SVSFDTPNLVYLEFT-----DTVAVKYPKVNFDSLVEASIGLRMTPDQVFDARDLVNRHH 291
Query: 287 ------------WLAELANIKSLTLNHTALKV 306
++ + N+K++ L+ AL+V
Sbjct: 292 GYKRCKGANAADFMMGVCNVKTMYLSSEALEV 323
>ref|NP_189327.2| F-box family protein [Arabidopsis thaliana]
Length = 565
Score = 75.5 bits (184), Expect = 2e-12
Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKSFNRFV 74
DR+SDLP +LL+ILS+L + V T +S WR LWK +PTL + +S +
Sbjct: 273 DRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTL---KFDYENNQSEDETY 329
Query: 75 SRILCLRDVSTPLHAVDFL--------CRGVVDPRLLKKVVTYAVSHNVEKLRVHACCDF 126
S I+C +S ++ L CR V + + YA L V +
Sbjct: 330 SEIVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIG--IAYARHVRDLVLHVESVKGS 387
Query: 127 QHFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGCAEP 186
F + ++C TL SL L R+ + P L +L TL LE+ + DD
Sbjct: 388 FIFPTGLYNCETLESLTL-----RSWVLVDVPSPACLKSLRTLRLENVDYKY-DDSVYNL 441
Query: 187 FSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIV--GDPVYYSTVELSTPSLFTFDFV 244
S +L+NL++ N+L+ E+ I+ +L LTI D Y + ++ PSL ++
Sbjct: 442 LSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVINAPSL---KYL 498
Query: 245 CYEGIPVLKLC 255
+G L+ C
Sbjct: 499 KIDGFKALESC 509
Score = 37.0 bits (84), Expect = 0.73
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 99 DPRLL--KKVVTYAVSHNVEKLRVHACC-DFQHFSSCFFSCHTLTSLDL--CVGPPRTDE 153
DPR++ + ++ A + KL + D+ F + ++ TL +L+L C+
Sbjct: 6 DPRIMDFEILIGIAFGRQLRKLVLKVYSGDWFKFPTSLYNSETLETLELYHCI------- 58
Query: 154 RLSFPKSLNLPALTTLSLESFAFCVGDDGCAEPFSALNSLKNLMILYCNVLDAESLCISS 213
+ P + L +L TL+L F V D+ + SL+NL+I L+ ++ I+
Sbjct: 59 LIDVPFPVCLKSLRTLNLHEVEF-VNDESVVNLLAGCISLENLVIHQTTDLNVKTFTIAV 117
Query: 214 VTLTNLTIVGDPVYY---STVELSTPSLFTFDFVCYEGIPV 251
+L LT++ + YY S ++TPSL ++ EGI V
Sbjct: 118 PSLQRLTVIVE--YYEEFSVFVVNTPSL---KYLKIEGIIV 153
>ref|NP_680683.1| F-box family protein [Arabidopsis thaliana]
Length = 294
Score = 75.1 bits (183), Expect = 2e-12
Identities = 85/295 (28%), Positives = 133/295 (44%), Gaps = 37/295 (12%)
Query: 1 MKRGRKKHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILC 60
MKR RK+ V DR+S LP ++++ILSLL + AV T +S +W+ LWK LP L
Sbjct: 1 MKR-RKRGRGIVNADRISQLPEALIIQILSLLPTEVAVTTSVLSKQWQFLWKMLPKLNFD 59
Query: 61 S-SHFMRIKSFNRFVSRILCLRDVSTPLHAVDFLCR-GVVDPRLLKKVVTYAVSHNVEKL 118
S K+F++ V R L L + LH++ + + + K++ A + N+ KL
Sbjct: 60 SLDQRHEFKTFSKNVKRAL-LSHKAPVLHSLHLIVHLHLCNSMNTAKLIGIAFACNLRKL 118
Query: 119 RVHACCDFQHFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCV 178
+ ++C TL +L+L + + P S+ L +L TL L F
Sbjct: 119 VLEVDGGRFSIPESLYNCETLDTLEL-----KYSILMDVPSSICLKSLRTLHLHYVDFKD 173
Query: 179 GD------DGCAE---------PFS-------ALNSLKNLMILYCNVLDAES-LCISSVT 215
+ GC PFS A++SLK L I + +D + I+S +
Sbjct: 174 NESALNLLSGCPNLENLVVHRYPFSSVKTYTIAVSSLKRLTIYTSSTVDPRAGYVINSPS 233
Query: 216 LTNLTIVGDPVYYSTVELSTPSLFTFDFVCYEGIPVLKLCRSKINLSSVKHVNIE 270
LT L IVG + + +E + P L + I L S L+SVK + +E
Sbjct: 234 LTYLKIVGQ-IGFCLIE-NVPELVEASMIVSSQIINKNLLES---LTSVKRLFLE 283
>ref|NP_177121.1| F-box family protein [Arabidopsis thaliana]
gi|12325183|gb|AAG52534.1| hypothetical protein;
77728-79262 [Arabidopsis thaliana]
gi|25404821|pir||A96718 hypothetical protein T6C23.17
[imported] - Arabidopsis thaliana
gi|10092292|gb|AAG12704.1| hypothetical protein;
7662-9196 [Arabidopsis thaliana]
Length = 451
Score = 74.7 bits (182), Expect = 3e-12
Identities = 88/325 (27%), Positives = 135/325 (41%), Gaps = 36/325 (11%)
Query: 2 KRGRKKHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCS 61
K R K +D V D +S LP+C+L +L L + VKT +S RWR+LWKH+P L L +
Sbjct: 7 KHVRAKGSDEV--DWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDN 64
Query: 62 SHFMRIKSFNRFVSRILCLRDVS-TPLHAVDFLCRGVVDP------RLLKKVVTYAVSHN 114
+ F +F FV L S + + C DP R + +VT V H
Sbjct: 65 TDFQEFNTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHI 124
Query: 115 VEKLRVHACCDFQHFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESF 174
+ + Q S ++C +L SL LC L+ P+ ++LP+L + L
Sbjct: 125 DVLDDSYGSWEVQ-LPSSIYTCESLVSLKLC------GLTLASPEFVSLPSLKVMDLIIT 177
Query: 175 AFCVGDDGCAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDP----VYYST 230
F D G + L++L I + E L + S +L T V D V
Sbjct: 178 KF-ADDMGLETLITKCPVLESLTIERSFCDEIEVLRVRSQSLLRFTHVADSDEGVVEDLV 236
Query: 231 VELSTPSLFTFDFVCYEGIPVL-----KLCRSKI----NLSSVKHVNIEVRMWTDYADAS 281
V + P L + + KL ++ I NLSSV N D
Sbjct: 237 VSIDAPKLEYLRLSDHRVASFILNKPGKLVKADIDIVFNLSSVNKFN------PDDLPKR 290
Query: 282 LVLLNWLAELANIKSLTLNHTALKV 306
++ N+L ++ IK + + + L+V
Sbjct: 291 TMIRNFLLGISTIKDMIIFSSTLEV 315
>emb|CAB91589.1| putative protein [Arabidopsis thaliana] gi|11357651|pir||T48987
hypothetical protein F25L23.50 - Arabidopsis thaliana
Length = 514
Score = 74.7 bits (182), Expect = 3e-12
Identities = 83/329 (25%), Positives = 145/329 (43%), Gaps = 44/329 (13%)
Query: 10 DYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR--- 66
D +D +S+LP+ +L +LS L EA T ++ RWR L +P L L + + R
Sbjct: 2 DSGSKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKM 61
Query: 67 --------IKSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKL 118
KSF FV R++ L+ + PL C+ DP + V + VE+L
Sbjct: 62 GRRKRLELRKSFKLFVDRVMALQG-NAPLKKFSLRCKIGSDPSRVNGWVLKVLDRGVEEL 120
Query: 119 RVHACCDFQH-FSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFC 177
++ ++++ TL SL + TDE LP L TL L + +F
Sbjct: 121 DLYIASEYEYPLPPKVLMTKTLVSLKV----SGTDEFTIDVGEFFLPKLKTLHLSAISF- 175
Query: 178 VGDDG---CAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYS--TVE 232
GD+G A+ SA ++L+ L+++ E +SS +L ++I + + + +V
Sbjct: 176 -GDEGGPPFAKLISACHALEELVMIKMMWDYWEFCSVSSPSLKRVSIDCENIDENPKSVS 234
Query: 233 LSTPSLFTFDFVCYEGIPVLKLCRSKINLSSVKHVNIEVRMWTDYADASLVLLN------ 286
TP+L +F + + K+N S+ +I +RM D + L+N
Sbjct: 235 FDTPNLVYLEFT-----DTVAVKYPKVNFDSLVEASIGLRMTPDQVFDARDLVNRHHGYK 289
Query: 287 ---------WLAELANIKSLTLNHTALKV 306
++ + N+K++ L+ AL+V
Sbjct: 290 RCKGANAADFMMGVCNVKTMYLSSEALEV 318
>ref|NP_974590.1| F-box family protein [Arabidopsis thaliana]
Length = 332
Score = 73.2 bits (178), Expect = 9e-12
Identities = 71/242 (29%), Positives = 102/242 (41%), Gaps = 27/242 (11%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKSFNRFV 74
DR++ L + ++ ILSLL EA T +S RWR+L+ P L L SF FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 75 SRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHACC--DFQHFSSC 132
R+L + + P+ + CR +D + + + + H V L + D
Sbjct: 62 DRVLVVTG-NFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 133 FFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGC--AEPFSAL 190
F+C TL L L G P ++LP+L TL L S FC D C SA
Sbjct: 121 IFTCKTLVELKLARG-----FYAMVPDYVSLPSLKTLFLSSIWFC-NRDCCPLGRLLSAC 174
Query: 191 NSLKNLMIL--------YCNVLDAESLCISSVTLTNLTIVGDPVY-YSTVELSTPSLFTF 241
L+ L I+ +C +SS TL LTI Y Y + + TPSL
Sbjct: 175 PVLEELTIIGGCWQHIEFCRT-------VSSSTLKKLTITSSFHYEYWGITIDTPSLAYL 227
Query: 242 DF 243
++
Sbjct: 228 EY 229
>ref|NP_193959.2| F-box family protein [Arabidopsis thaliana]
Length = 415
Score = 73.2 bits (178), Expect = 9e-12
Identities = 71/242 (29%), Positives = 102/242 (41%), Gaps = 27/242 (11%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKSFNRFV 74
DR++ L + ++ ILSLL EA T +S RWR+L+ P L L SF FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 75 SRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHACC--DFQHFSSC 132
R+L + + P+ + CR +D + + + + H V L + D
Sbjct: 62 DRVLVVTG-NFPIRRISIKCRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDIGFVPLE 120
Query: 133 FFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGC--AEPFSAL 190
F+C TL L L G P ++LP+L TL L S FC D C SA
Sbjct: 121 IFTCKTLVELKLARG-----FYAMVPDYVSLPSLKTLFLSSIWFC-NRDCCPLGRLLSAC 174
Query: 191 NSLKNLMIL--------YCNVLDAESLCISSVTLTNLTIVGDPVY-YSTVELSTPSLFTF 241
L+ L I+ +C +SS TL LTI Y Y + + TPSL
Sbjct: 175 PVLEELTIIGGCWQHIEFCRT-------VSSSTLKKLTITSSFHYEYWGITIDTPSLAYL 227
Query: 242 DF 243
++
Sbjct: 228 EY 229
>emb|CAB88303.1| putative protein [Arabidopsis thaliana]
gi|15231586|ref|NP_191445.1| F-box family protein
[Arabidopsis thaliana] gi|11358152|pir||T49169
hypothetical protein T20N10.210 - Arabidopsis thaliana
Length = 457
Score = 72.0 bits (175), Expect = 2e-11
Identities = 78/283 (27%), Positives = 120/283 (41%), Gaps = 33/283 (11%)
Query: 10 DYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR--- 66
D K D S LP+ V+ ILS L EA T ++ +WR+L+ +P+L S F+
Sbjct: 2 DSEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQE 61
Query: 67 --------IKSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKL 118
++SF FV R+L L+ S P+ + VDP + + + + V L
Sbjct: 62 GKREKDGILRSFMDFVDRVLALQGAS-PIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHL 120
Query: 119 RVHACCDFQHFSSCFFS---CHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFA 175
+ DF+ S + TL L G + + + LP L TL LES
Sbjct: 121 ALF--MDFEEEYSLPYEISVSKTLVELKTGYGV----DLYLWDDDMFLPMLKTLVLESVE 174
Query: 176 FCVGDDGCAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYSTVELST 235
F G P A L+ LM+L D ++ +SS +L NL I + T+ T
Sbjct: 175 FGRGQFQTLLP--ACPVLEELMLLNMEWKD-RNVILSSSSLKNLKITSEDGCLGTLSFDT 231
Query: 236 PSLFTFDFVCY--EGIPVLKLCRSKINLSSVKHVNIEVRMWTD 276
P+L D+ Y E P+ +NL ++ V I + + D
Sbjct: 232 PNLVFLDYYDYVAEDYPI-------VNLKNLVEVGINLVLTAD 267
>emb|CAB86928.1| putative protein [Arabidopsis thaliana] gi|11357521|pir||T47782
hypothetical protein F17J16.50 - Arabidopsis thaliana
Length = 461
Score = 71.6 bits (174), Expect = 3e-11
Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 27/258 (10%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR-------- 66
DR+ LP+ +L ILS L EA T +S RWR+L +P L F+
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 67 ---IKSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHAC 123
+SF FV R+L L+ +P+ CR VD + ++ ++ V +L +
Sbjct: 62 DEIRQSFMDFVDRVLALQ-AESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLII 120
Query: 124 C-----DFQHFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCV 178
D S F+ TL L++ G + S+ LP L TL L+S F V
Sbjct: 121 LGMTMEDSYRLSPKGFASKTLVKLEIGCG----IDISWVAGSIFLPMLKTLVLDSVWFYV 176
Query: 179 GDDGCAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYSTVELSTPSL 238
D AL +L+ L+++ N LD++ + IS+ +L LTI D + T TPSL
Sbjct: 177 --DKFETLLLALPALEELVLVDVNWLDSD-VTISNASLKTLTIDSDG-HLGTFSFDTPSL 232
Query: 239 FTFDFVCY--EGIPVLKL 254
F + Y E PV+K+
Sbjct: 233 VYFCYSDYAAEDYPVVKM 250
>ref|NP_191459.2| F-box family protein [Arabidopsis thaliana]
Length = 491
Score = 71.6 bits (174), Expect = 3e-11
Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 27/258 (10%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR-------- 66
DR+ LP+ +L ILS L EA T +S RWR+L +P L F+
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 67 ---IKSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHAC 123
+SF FV R+L L+ +P+ CR VD + ++ ++ V +L +
Sbjct: 62 DEIRQSFMDFVDRVLALQ-AESPIKKFSLKCRIGVDSDRVDGWISNVLNRGVSELDLLII 120
Query: 124 C-----DFQHFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCV 178
D S F+ TL L++ G + S+ LP L TL L+S F V
Sbjct: 121 LGMTMEDSYRLSPKGFASKTLVKLEIGCG----IDISWVAGSIFLPMLKTLVLDSVWFYV 176
Query: 179 GDDGCAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYSTVELSTPSL 238
D AL +L+ L+++ N LD++ + IS+ +L LTI D + T TPSL
Sbjct: 177 --DKFETLLLALPALEELVLVDVNWLDSD-VTISNASLKTLTIDSDG-HLGTFSFDTPSL 232
Query: 239 FTFDFVCY--EGIPVLKL 254
F + Y E PV+K+
Sbjct: 233 VYFCYSDYAAEDYPVVKM 250
>gb|AAM91134.1| unknown protein [Arabidopsis thaliana] gi|14596145|gb|AAK68800.1|
Unknown protein [Arabidopsis thaliana]
gi|18414140|ref|NP_567421.1| F-box family protein
[Arabidopsis thaliana]
Length = 468
Score = 71.2 bits (173), Expect = 3e-11
Identities = 82/309 (26%), Positives = 137/309 (43%), Gaps = 31/309 (10%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMR-------I 67
D +S LP + ILS L EA T +S +WR+L+ +P L L S ++
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 68 KSFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHACCDFQ 127
SF FV R+L L+ ++PLH V+P + + + V L +H + +
Sbjct: 68 SSFMDFVDRVLALQG-NSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETE 126
Query: 128 H-FSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGCAEP 186
F S F TL L L + P L F + + LP L TL ++S F G +
Sbjct: 127 FVFPSEMFLSKTLVRLKLMLYP-----LLEF-EDVYLPKLKTLYIDSCYFEKYGIGLTKL 180
Query: 187 FSALNSLKNLM---ILYCNVLDAESLCISSV-TLTNLTIVGDPVYYSTVELSTPSLFTFD 242
S L++L+ I +C D S+ + ++ LT T V D + +V + TP+L
Sbjct: 181 LSGCPILEDLVLDDIPWC-TWDFASVSVPTLKRLTFSTQVRDE-FPKSVSIDTPNLVYLK 238
Query: 243 FVCYEGIPVLKLCRSKINLSSVKHVNIEVRM---WTDYADASLV--LLNWLAELANIKSL 297
F + K+N S+ +I++R+ Y + +V +++ + N+K+L
Sbjct: 239 FT-----DTVAGKYPKVNFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMRICNVKTL 293
Query: 298 TLNHTALKV 306
L+ L+V
Sbjct: 294 YLSSNTLQV 302
>dbj|BAB09899.1| unnamed protein product [Arabidopsis thaliana]
gi|15241936|ref|NP_200492.1| F-box family protein
[Arabidopsis thaliana]
Length = 435
Score = 70.9 bits (172), Expect = 5e-11
Identities = 98/372 (26%), Positives = 152/372 (40%), Gaps = 100/372 (26%)
Query: 1 MKRGRKKHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILC 60
M+ R D DR+S LPN +L RILSL+ +A+ T +S RW+ +WK LPTL+
Sbjct: 1 MEAARSGIEDVTSPDRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYN 60
Query: 61 SSHFMRIKS--FNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKL 118
+ I S F++F R L L + L K +T + + L
Sbjct: 61 ENSCSNIGSLGFDQFCGRSLQLHEAP------------------LLKTLTLELRKQTDSL 102
Query: 119 RVHACCDFQHFSSCFFSCHTLTSLDLCV---GPPRTDERLSFPKSLNL-PALTTLSLESF 174
SS F + H+ T L+ + G P +SFP +L++ L L L+
Sbjct: 103 D----------SSIFPNIHS-TLLEFSIKSTGYPVYYSTISFPNNLDVFQTLVVLKLQG- 150
Query: 175 AFCVGDDGCAEPFSALNSLK------------NLMILYCNVLD---AESLC--------I 211
C+ F +L SL + ++ C VL+ + LC I
Sbjct: 151 NICLDVVDSPVCFQSLKSLYLTCVNFENEESFSKLLSACPVLEDLFLQRLCSVGRFLFSI 210
Query: 212 SSVTLTNLTIVGDPVYYST----VELSTPS---LFTFD----FVCYEGIPVLKLCRSKIN 260
S +L LT + YYS +E++ PS L FD F E +P L ++
Sbjct: 211 SVPSLQRLTYTKEQAYYSNDEAILEITAPSLKHLNIFDRVGVFSFIEDMPKLVEASVRVK 270
Query: 261 LS----------SVKHVNIE------------------VRMWTDYAD--ASLVLLNWLAE 290
LS SV+H++++ + + D D S +LL+ L +
Sbjct: 271 LSKNEKLPKVLTSVEHLSLDLYPSMVFHLDDRFISKQLLHLKLDIYDNFQSNLLLSLLKD 330
Query: 291 LANIKSLTLNHT 302
L N++SL LNH+
Sbjct: 331 LPNLQSLKLNHS 342
>emb|CAB91586.1| putative protein [Arabidopsis thaliana]
gi|15231642|ref|NP_191475.1| F-box family protein
[Arabidopsis thaliana] gi|11357644|pir||T48984
hypothetical protein F25L23.20 - Arabidopsis thaliana
Length = 464
Score = 70.1 bits (170), Expect = 8e-11
Identities = 83/312 (26%), Positives = 124/312 (39%), Gaps = 48/312 (15%)
Query: 7 KHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFM- 65
K D +D ++DLP+ +L +LS L EA T +S RWR+L +P L S ++
Sbjct: 5 KRMDSGSKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLH 64
Query: 66 ---RIK------------------------SFNRFVSRILCLRDVSTPLHAVDFLC---R 95
R+K SF FV RIL L+ ++PL
Sbjct: 65 RDKRVKNPLHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQG-NSPLDKFSLKMVDDH 123
Query: 96 GVVDPRLLKKVVTYAVSHNVEKLRVHACCDFQHFSSC---FFSCHTLTSLDLCV--GPPR 150
VDP + + + V L H D ++S F TL L L + GPP
Sbjct: 124 DPVDPDCVAPWIHKVLVRGVSDL--HLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPI 181
Query: 151 TDERLSFPKSLNLPALTTLSLESFAFCVGDDGCAEPFSALNSLKNLMILYCNVLDAESLC 210
K ++LP L TL LES F D G ++ S L+ L++ + S
Sbjct: 182 D------VKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCS 235
Query: 211 ISSVTLTNLTIVGDPVYYSTVELSTPSLFTFD---FVCYEGIPVLKLCRSKINLSSVKHV 267
+S TL LT + + + + P+ +FD V E V+ K+N S+
Sbjct: 236 VSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEA 295
Query: 268 NIEVRMWTDYAD 279
I++ M D D
Sbjct: 296 KIDIWMTNDQLD 307
>emb|CAB86943.1| putative protein [Arabidopsis thaliana] gi|11357520|pir||T47797
hypothetical protein F17J16.200 - Arabidopsis thaliana
(fragment)
Length = 827
Score = 70.1 bits (170), Expect = 8e-11
Identities = 83/312 (26%), Positives = 124/312 (39%), Gaps = 48/312 (15%)
Query: 7 KHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFM- 65
K D +D ++DLP+ +L +LS L EA T +S RWR+L +P L S ++
Sbjct: 487 KRMDSGSKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLH 546
Query: 66 ---RIK------------------------SFNRFVSRILCLRDVSTPLHAVDFLC---R 95
R+K SF FV RIL L+ ++PL
Sbjct: 547 RDKRVKNPLHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQG-NSPLDKFSLKMVDDH 605
Query: 96 GVVDPRLLKKVVTYAVSHNVEKLRVHACCDFQHFSSC---FFSCHTLTSLDLCV--GPPR 150
VDP + + + V L H D ++S F TL L L + GPP
Sbjct: 606 DPVDPDCVAPWIHKVLVRGVSDL--HLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGPPI 663
Query: 151 TDERLSFPKSLNLPALTTLSLESFAFCVGDDGCAEPFSALNSLKNLMILYCNVLDAESLC 210
K ++LP L TL LES F D G ++ S L+ L++ + S
Sbjct: 664 D------VKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCS 717
Query: 211 ISSVTLTNLTIVGDPVYYSTVELSTPSLFTFD---FVCYEGIPVLKLCRSKINLSSVKHV 267
+S TL LT + + + + P+ +FD V E V+ K+N S+
Sbjct: 718 VSVATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEA 777
Query: 268 NIEVRMWTDYAD 279
I++ M D D
Sbjct: 778 KIDIWMTNDQLD 789
Score = 65.1 bits (157), Expect = 2e-09
Identities = 75/243 (30%), Positives = 107/243 (43%), Gaps = 18/243 (7%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKS----- 69
D +S+LPN +L RILS L EA T +S RW +L +P L S ++ +
Sbjct: 13 DVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQRKN 72
Query: 70 --FNRFVSRILCLR-DVSTPLHAVDFLCR-GVVDPRLLKKVVTYAVSHNVEKLRVHACCD 125
F FV R+L R + S+ + V CR G V+P + K + V ++ L + C D
Sbjct: 73 VFFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDCVIKWILTTV-RDLGVLDLSLCID 131
Query: 126 FQHFSSCFFSCHTLTSLDLCVGPPRTDERLS-FPKSLNLPALTTLSLESFAFCVGDD-GC 183
F F F + T + L +G T RLS FP + P L +L L+ F GD
Sbjct: 132 FGIFHLPFNVFRSKTLVKLRIG---TMIRLSQFPSDVVSPTLNSLVLDLVEFRDGDKVEF 188
Query: 184 AEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGD---PVYYSTVELSTPSLFT 240
+ A SL++L + N + SS TL +L D V TPSL
Sbjct: 189 RQILLAFPSLQSLRVHESNKWKFWNGSASSRTLKSLVYRSDDDSSAPKPCVSFDTPSLVY 248
Query: 241 FDF 243
D+
Sbjct: 249 LDY 251
>dbj|BAB11678.1| unnamed protein product [Arabidopsis thaliana]
gi|15242955|ref|NP_197664.1| F-box family protein
[Arabidopsis thaliana]
Length = 422
Score = 69.7 bits (169), Expect = 1e-10
Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 47/270 (17%)
Query: 13 KEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKSFNR 72
KED +S LP+ ++ +IL L +AV T +S RWR LW P L+L S+ F +F
Sbjct: 21 KEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTPGLVLISNDFTDYNAFVS 80
Query: 73 FVSRILCL-RDVSTPLHAVDFLCR-GVVDPRLLKKVVTYAVSHNVEKLRVH----ACCDF 126
FV + L R+ LH + R G D + + + + + ++ L V C F
Sbjct: 81 FVDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFVATPKLKHLDVEIGPTRCECF 140
Query: 127 QHFSSCFFSCHTLTSLDL---CVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGC 183
+ +SC +L L L C+G +S++LP L T+SLE
Sbjct: 141 EVIPLSLYSCESLLYLRLNHVCLGK---------FESVSLPCLKTMSLE----------- 180
Query: 184 AEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVGDPVYYSTVELSTPSLFTFDF 243
+Y N D ESL + L +L+ V Y V + T
Sbjct: 181 -------------QNIYANEADLESLISTCPVLEDLSFVSGA--YDKVNVLRVQSQTLTS 225
Query: 244 VCYEG-IPVLKLCRSK--INLSSVKHVNIE 270
+ EG + L L +S+ I+ + +K++N+E
Sbjct: 226 LNIEGCVEYLDLDKSEVLIDATRLKYLNLE 255
>gb|AAF34427.1| unknown protein [Oryza sativa]
Length = 518
Score = 69.7 bits (169), Expect = 1e-10
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 13 KEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSS--HFMRIKSF 70
+E + DLP+ +L +ILSLL ADEAVKTC +S RWRHLWK L + S + F
Sbjct: 99 EECGIDDLPDELLQQILSLLSADEAVKTCVLSRRWRHLWKSTDILRVAYSTDRWKSSDEF 158
Query: 71 NRFVSRILCLRDVSTPLHAVD--FLCR--------GVVDP-RLLKKVVTYAVSHNVEKLR 119
+FV+ ++ LR +S PL +D F R G DP + + V YAV V+ L+
Sbjct: 159 KKFVNHLVLLRGIS-PLRELDLRFNARRYEDVVHDGGSDPYQCVMLWVMYAVMCRVQVLK 217
Query: 120 VH 121
+H
Sbjct: 218 IH 219
>gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|18414142|ref|NP_567422.1|
F-box family protein [Arabidopsis thaliana]
Length = 381
Score = 68.6 bits (166), Expect = 2e-10
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 30/312 (9%)
Query: 15 DRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIK------ 68
D +S LP+ + ILS L EA T +S +WR+L+ +P L L S ++ +
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 69 -SFNRFVSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHACCDFQ 127
SF FV R+L L+ ++PLH +DP + + + V L +H + +
Sbjct: 68 TSFMDFVDRVLALQG-NSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126
Query: 128 H-FSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAFCVGDDGCAEP 186
S + C TL L L G T + + ++LP L TL +E+ F G +
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTID----VEDVHLPKLKTLYIEATHFEEHGVGLTKL 182
Query: 187 FSALNSLKNLMI--LYCNVLDAESLCISSVTLTNLTIVGDPVYYSTVELSTPSLFTFDFV 244
S L++L++ + + D S+ + ++ + + +V L TP+L F
Sbjct: 183 LSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFT 242
Query: 245 CYEGIPVLKLCRSKINLSSVKHVNIEVRM--------WTDYADASLV--LLNWLAELANI 294
+ K+NL S+ +I++R+ Y + +V +++ + N+
Sbjct: 243 -----DTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNV 297
Query: 295 KSLTLNHTALKV 306
K+L L+ L+V
Sbjct: 298 KTLYLSANTLQV 309
>ref|NP_177997.1| F-box family protein [Arabidopsis thaliana]
gi|3834318|gb|AAC83034.1| Similar to gi|2244754 heat
shock transcription factor HSF30 homolog from
Arabidopsis thaliana chromosome 4 contig gb|Z97335
gi|25406567|pir||F96816 hypothetical protein F9K20.20
[imported] - Arabidopsis thaliana
Length = 452
Score = 68.6 bits (166), Expect = 2e-10
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 28/318 (8%)
Query: 4 GRKKHNDYVKEDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSH 63
G +K +EDRLS+LP ++ +I+ + + VK+ +S RWR+LW+++P L + +
Sbjct: 5 GDEKRARRSEEDRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEYNQ 64
Query: 64 FMRIKSFNRFVSRILCL-RDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHA 122
F+ +F FV R L L R+ + + C + R + V + +KL+V
Sbjct: 65 FLDYNAFVSFVDRFLALDRESCFQSFRLRYDCD--EEERTISNVKRWINIVVDQKLKVLD 122
Query: 123 CCDFQ------HFSSCFFSCHTLTSLDLCVGPPRTDERLSFPKSLNLPALTTLSLESFAF 176
D+ ++C +L SL LC + L PK ++LP + + L+ F
Sbjct: 123 VLDYTWGNEEVQIPPSVYTCESLVSLKLC------NVILPNPKVISLPLVKVIELDIVKF 176
Query: 177 CVGDDGCAEPFSALNSLKNLMILYCNVLDAESLCISSVTLTNLTIVG---DPVYYSTVEL 233
+ S+ ++L++L+I +V D L +SS +L + +G D V +
Sbjct: 177 S-NALVLEKIISSCSALESLIISRSSVDDINVLRVSSRSLLSFKHIGNCSDGWDELEVAI 235
Query: 234 STPSLFTFDFVCYEGIPVL-----KLCRSKINLSSVKHVNIEVRMWTDYADASLVLLNWL 288
P L + + L +KIN+ N+E + ++ ++L
Sbjct: 236 DAPKLEYLNISDHSTAKFKMKNSGSLVEAKINII----FNMEELPHPNDRPKRKMIQDFL 291
Query: 289 AELANIKSLTLNHTALKV 306
AE++++K L ++ L+V
Sbjct: 292 AEISSVKKLFISSHTLEV 309
>gb|AAX96212.1| F-box domain, putative [Oryza sativa (japonica cultivar-group)]
Length = 433
Score = 68.2 bits (165), Expect = 3e-10
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 16 RLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTL-ILCSSHFMRIKSFNRFV 74
++ DLP +L R++SLL A + V+T +S RWRHLW+ P L I+ F ++ N FV
Sbjct: 19 KIGDLPEDLLQRVVSLLSARQTVQTSALSRRWRHLWRSAPLLRIVPDEGFQTVRGLNEFV 78
Query: 75 SRILCLRDVSTPLHA--VDFLC 94
+L LRD + PL A ++F C
Sbjct: 79 KHLLLLRDGAAPLDACVINFYC 100
>dbj|BAD94200.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 67.8 bits (164), Expect = 4e-10
Identities = 85/313 (27%), Positives = 135/313 (42%), Gaps = 42/313 (13%)
Query: 14 EDRLSDLPNCVLLRILSLLDADEAVKTCTISSRWRHLWKHLPTLILCSSHFMRIKSFNRF 73
EDR+S LP +L ILS L ++V+T +SSRWR LW +P L L S F F
Sbjct: 10 EDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSASF 69
Query: 74 VSRILCLRDVSTPLHAVDFLCRGVVDPRLLKKVVTYAVSHNVEKLRVHACCDFQHF--SS 131
V + L R S RG +L Y +S L C QHF +
Sbjct: 70 VDKFLNFRGES--------YLRGF---KLNTDHDVYDISTLDACLMRLDKCKIQHFEIEN 118
Query: 132 CFFSCHTLTSLDLCVGPPRTDERLSFP-----KSLNLPALTTLSLESFAFCVGDDGCAEP 186
CF C L L + + +LSF SL+LP L + E F D AE
Sbjct: 119 CFGFCILLMPLIIPMCHTLVSLKLSFVILSKFGSLSLPCLEIMHFEKVIF--PSDKSAEV 176
Query: 187 FSALNS-LKNLMILYCNVLDAESLCISSVTLTNLTI-------VGDPVYYSTVELSTPSL 238
A + L++L I E L + S +L + T+ VG+ Y TV + TP L
Sbjct: 177 LIACSPVLRDLRISQSGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEY--TVVIDTPRL 234
Query: 239 FTFDFVCYEGIPVLKLCRSKINLSSVKHVNIEVRMWTDYADASL-----VLLNWLAELAN 293
+ Y+ C+ +S ++V + V + + ++ ++ ++L+ ++N
Sbjct: 235 EYLNLKDYQ-------CQGFKIVSMSEYVRVHVDVVFEVIGGTVLSKRNIICDFLSCVSN 287
Query: 294 IKSLTLNHTALKV 306
++ +T++ +L+V
Sbjct: 288 VRYMTISRRSLEV 300
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 500,014,157
Number of Sequences: 2540612
Number of extensions: 19202173
Number of successful extensions: 48274
Number of sequences better than 10.0: 453
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 47736
Number of HSP's gapped (non-prelim): 533
length of query: 307
length of database: 863,360,394
effective HSP length: 127
effective length of query: 180
effective length of database: 540,702,670
effective search space: 97326480600
effective search space used: 97326480600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 75 (33.5 bits)
Medicago: description of AC147179.8