BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147012.5 + phase: 0
(789 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51287.1| helicase, putative [Arabidopsis thaliana] 683 0.0
ref|NP_174605.1| helicase domain-containing protein [Arabidopsis... 683 0.0
ref|XP_467674.1| putative kurz protein [Oryza sativa (japonica c... 655 0.0
ref|XP_637255.1| hypothetical protein DDB0187437 [Dictyostelium ... 369 e-100
gb|AAH37964.1| DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo s... 306 1e-81
ref|NP_976064.1| DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Mus ... 306 2e-81
dbj|BAD90451.1| mKIAA1517 protein [Mus musculus] 306 2e-81
gb|AAH02575.2| DHX37 protein [Homo sapiens] 304 6e-81
ref|XP_607648.1| PREDICTED: similar to mKIAA1517 protein, partia... 303 2e-80
ref|XP_213772.3| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) bo... 295 5e-78
dbj|BAA96041.1| KIAA1517 protein [Homo sapiens] 292 3e-77
ref|XP_415104.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) bo... 288 5e-76
emb|CAE69279.1| Hypothetical protein CBG15333 [Caenorhabditis br... 278 4e-73
gb|AAA27928.2| Hypothetical protein C06E1.10 [Caenorhabditis ele... 277 1e-72
pir||H88533 probable ATP-dependent RNA helicase C06E1.10 - Caeno... 275 4e-72
gb|EAL32290.1| GA16807-PA [Drosophila pseudoobscura] 274 7e-72
emb|CAA88553.1| unknown [Saccharomyces cerevisiae] gi|6323776|re... 270 1e-70
gb|AAS53593.1| AFR222Wp [Ashbya gossypii ATCC 10895] gi|45198740... 268 4e-70
emb|CAG98571.1| unnamed protein product [Kluyveromyces lactis NR... 267 1e-69
emb|CAG61351.1| unnamed protein product [Candida glabrata CBS138... 266 2e-69
>gb|AAG51287.1| helicase, putative [Arabidopsis thaliana]
Length = 1191
Score = 683 bits (1762), Expect = 0.0
Identities = 382/765 (49%), Positives = 489/765 (62%), Gaps = 77/765 (10%)
Query: 17 ETSSVEGININEINEAFEMPGSSSMQQTDRFSGYDED-----DNNFDEN--ESDSYDSET 69
+ S G+++ EI EAF+ S Q RFS + ED D N+D++ E D Y+S+
Sbjct: 480 DDGSFGGVDMKEIAEAFD---DDSNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDE 536
Query: 70 ESELEFNDDDKNNHEGSKNNNNIVDVLGNEGSLASLKAAFENLSGQATLSSSNVNTEDSL 129
+ + E DD EG L +L+AAF L+ + + +V+ E +
Sbjct: 537 DRDWETVDD------------GFASSFVEEGKLDALRAAFNALADK----NGSVSAEPA- 579
Query: 130 DQSKVGREKIARENHDS-------SPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVA 182
+ IA EN ++ SPG L VLPLYAML AAQLRVF+ V++ ERLVVVA
Sbjct: 580 -------KSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVA 632
Query: 183 TNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGH 242
TNVAETSLTIPGIKYVVDTGR KVKNYDS GME+YEV WIS+ASA+QRAGRAGRT GH
Sbjct: 633 TNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGH 692
Query: 243 CYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAE 302
CYRLYSSA FSN F E S E+ KVPV GV+LL+KSM I KV NFPFPT + +++ EAE
Sbjct: 693 CYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAE 752
Query: 303 NCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTR-YKHIRNSSLLLAYAVA 361
CL+ALEALDS LT LGKAM+ YP+SPRHSRM+LTVI+ + ++ ++L+L YAVA
Sbjct: 753 RCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVA 812
Query: 362 AAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREK 421
A AALSLPNP +M++EG N+ D + + + +K ++K K+ K AR++
Sbjct: 813 AVAALSLPNPLIMEFEGEKKNESK---------DADKTVKQEDKQRKKDRKEKIKAARDR 863
Query: 422 FRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGG 481
F SSDAL +AYAL FE S+N + FCE N LH KTMDEMSKL+ QLLRLVF
Sbjct: 864 FSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSE 923
Query: 482 LEQEYSWTHVTLEDVEHVWRV---SSAHYPLPLVEERLICRAICAGWADRVAKRIPISKA 538
E +SWTH T++DVE WR+ +S+ PL EE L+ AICAGWADRVA++
Sbjct: 924 TEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRVARK------ 977
Query: 539 VDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAY 598
+RA YQ+C V E +F+HRWSS+ PE LVY+ELL T RP Y
Sbjct: 978 ------TRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRP-----------Y 1020
Query: 599 MHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSI 658
MHG T V P WLV++AKS C+FS PL DP+P+Y ++ D+V CWV+P+FG WELP HS+
Sbjct: 1021 MHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHNWELPAHSV 1080
Query: 659 PISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSR 718
I+ R F ALL+G+V TCLKS R ++ PET+L REA G +RVG+L+ L +
Sbjct: 1081 AITEDRDRAAAFGCALLQGEVLTCLKSFRALLAGKPETLLEREAWGLERVGSLVMVLTEK 1140
Query: 719 LIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELWLQMLGE 763
ID+ LR W+QNP L+SEI WFQ+ FR ++LW ML E
Sbjct: 1141 KIDTLESLRKNWEQNPNVLYSEIEVWFQKKFRHRVKDLWQTMLKE 1185
>ref|NP_174605.1| helicase domain-containing protein [Arabidopsis thaliana]
gi|12322388|gb|AAG51220.1| RNA helicase, putative;
27866-23496 [Arabidopsis thaliana]
gi|25403185|pir||E86457 probable RNA helicase,
27866-23496 [imported] - Arabidopsis thaliana
Length = 1237
Score = 683 bits (1762), Expect = 0.0
Identities = 382/765 (49%), Positives = 489/765 (62%), Gaps = 77/765 (10%)
Query: 17 ETSSVEGININEINEAFEMPGSSSMQQTDRFSGYDED-----DNNFDEN--ESDSYDSET 69
+ S G+++ EI EAF+ S Q RFS + ED D N+D++ E D Y+S+
Sbjct: 526 DDGSFGGVDMKEIAEAFD---DDSNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDE 582
Query: 70 ESELEFNDDDKNNHEGSKNNNNIVDVLGNEGSLASLKAAFENLSGQATLSSSNVNTEDSL 129
+ + E DD EG L +L+AAF L+ + + +V+ E +
Sbjct: 583 DRDWETVDD------------GFASSFVEEGKLDALRAAFNALADK----NGSVSAEPA- 625
Query: 130 DQSKVGREKIARENHDS-------SPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVA 182
+ IA EN ++ SPG L VLPLYAML AAQLRVF+ V++ ERLVVVA
Sbjct: 626 -------KSIAAENQEAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVA 678
Query: 183 TNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGH 242
TNVAETSLTIPGIKYVVDTGR KVKNYDS GME+YEV WIS+ASA+QRAGRAGRT GH
Sbjct: 679 TNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGH 738
Query: 243 CYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAE 302
CYRLYSSA FSN F E S E+ KVPV GV+LL+KSM I KV NFPFPT + +++ EAE
Sbjct: 739 CYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAE 798
Query: 303 NCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTR-YKHIRNSSLLLAYAVA 361
CL+ALEALDS LT LGKAM+ YP+SPRHSRM+LTVI+ + ++ ++L+L YAVA
Sbjct: 799 RCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVA 858
Query: 362 AAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREK 421
A AALSLPNP +M++EG N+ D + + + +K ++K K+ K AR++
Sbjct: 859 AVAALSLPNPLIMEFEGEKKNESK---------DADKTVKQEDKQRKKDRKEKIKAARDR 909
Query: 422 FRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGG 481
F SSDAL +AYAL FE S+N + FCE N LH KTMDEMSKL+ QLLRLVF
Sbjct: 910 FSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSE 969
Query: 482 LEQEYSWTHVTLEDVEHVWRV---SSAHYPLPLVEERLICRAICAGWADRVAKRIPISKA 538
E +SWTH T++DVE WR+ +S+ PL EE L+ AICAGWADRVA++
Sbjct: 970 TEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRVARK------ 1023
Query: 539 VDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAY 598
+RA YQ+C V E +F+HRWSS+ PE LVY+ELL T RP Y
Sbjct: 1024 ------TRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRP-----------Y 1066
Query: 599 MHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSI 658
MHG T V P WLV++AKS C+FS PL DP+P+Y ++ D+V CWV+P+FG WELP HS+
Sbjct: 1067 MHGATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHNWELPAHSV 1126
Query: 659 PISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSR 718
I+ R F ALL+G+V TCLKS R ++ PET+L REA G +RVG+L+ L +
Sbjct: 1127 AITEDRDRAAAFGCALLQGEVLTCLKSFRALLAGKPETLLEREAWGLERVGSLVMVLTEK 1186
Query: 719 LIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELWLQMLGE 763
ID+ LR W+QNP L+SEI WFQ+ FR ++LW ML E
Sbjct: 1187 KIDTLESLRKNWEQNPNVLYSEIEVWFQKKFRHRVKDLWQTMLKE 1231
>ref|XP_467674.1| putative kurz protein [Oryza sativa (japonica cultivar-group)]
gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
sativa (japonica cultivar-group)]
Length = 1272
Score = 655 bits (1690), Expect = 0.0
Identities = 374/768 (48%), Positives = 497/768 (64%), Gaps = 41/768 (5%)
Query: 16 NETSSVEGININEINEAFEMPGSSSMQQTDRFSGYDEDDNNFDENESDSYDSETESELEF 75
+E S + + EI+EA+++ S Q D FS YDED++N DS D E E E++
Sbjct: 519 DENGSSQEVVEREISEAYDIDRDESEHQDDMFSQYDEDESNAGPGV-DSSDIEMEPEMDT 577
Query: 76 N-DDDKNNHEGSKNNNNIVDVL-GNEGSLASLKAAFE---NLSGQATLSSSNVNTEDSLD 130
+ +DD + +E ++ + ++ L G EGS + LKA+F+ +SG+ + N +
Sbjct: 578 DSEDDDSVYETTEEDGPVLAFLKGAEGS-SGLKASFKAISRVSGEPESTDVPSNATILEE 636
Query: 131 QSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSL 190
S V E S G L VLPLYAMLPA+ QLRVF + +GERLVVVATNVAETSL
Sbjct: 637 SSHVPCTSKCTEPRSVSHGKLRVLPLYAMLPASQQLRVFQDIPDGERLVVVATNVAETSL 696
Query: 191 TIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSA 250
TIPGIKYVVDTG++KVKNY+ + GM +YE++WISKASA+QR+GRAGRT GHCY LYS+A
Sbjct: 697 TIPGIKYVVDTGKQKVKNYNHATGMASYEIQWISKASASQRSGRAGRTGPGHCYHLYSAA 756
Query: 251 AFSNE--FPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRAL 308
A+ + FPEFS E++ +PV GVVL+LK M I KV NFPFPT SL+EAE CL+ L
Sbjct: 757 AYGKDELFPEFSEPEIKNIPVDGVVLMLKFMNINKVENFPFPTPPDKESLVEAERCLKVL 816
Query: 309 EALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKH-IRNSSLLLAYAVAAAAALS 367
EALDSK E TL+GKAMA YP+SPRHSR++LT++K + + +L YA AAA+ALS
Sbjct: 817 EALDSKGEPTLMGKAMAQYPMSPRHSRLLLTIVKILNSQRCFSRPNFILGYAAAAASALS 876
Query: 368 LPNPFVMQYE-GNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVS 426
NPF+ Q E +S +D+ SE D+ E+ ++KKLK + A KF S
Sbjct: 877 FTNPFLTQNEFSGESKQDNPDSEDK---------DRQERKRQKKLKAMVREAHTKFSNPS 927
Query: 427 SDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEY 486
SDAL+I+ ALQ FE S+N V+FC N+LH KTM+EMSKLR+QLLRL+F + +E+
Sbjct: 928 SDALSISRALQLFELSENPVEFCRVNSLHLKTMEEMSKLRKQLLRLIFHHSK---FCEEF 984
Query: 487 SWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPI--SKAVDGETI 544
SW EDVE WR S P+ L EE L+ + ICAGWADRVAKRI + D + +
Sbjct: 985 SWKFGVSEDVEEAWRHESDKKPMQLNEEELLGQGICAGWADRVAKRIRAFPGPSKDDKKV 1044
Query: 545 SRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTN 604
RA YQSC +++I++HR SSV+ + PEF+VY+ELL T KR+YMHGVT+
Sbjct: 1045 -RAVHYQSCAFNDTIYLHRSSSVARIAPEFVVYSELLHT-----------KRSYMHGVTS 1092
Query: 605 VDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVE 664
V P W+++ A S C FS PL DP+P+Y+ Q DQV C+V P F R W+LP HS+PI +
Sbjct: 1093 VKPGWILKYASSLCTFSAPLEDPKPYYEPQKDQVYCYVSPIFSRHNWQLPLHSLPIQDGT 1152
Query: 665 HRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLIS--KLNSRLIDS 722
+R+QVFA ALL+G V CLK ++K+++ P +L + Q+RVG+L+ K+ S+LIDS
Sbjct: 1153 NRLQVFACALLKGDVLPCLKVIQKFLALSPSVLL--GPVSQRRVGDLLDRMKIGSKLIDS 1210
Query: 723 SAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELWLQMLGEVLQETQE 770
A LR VW NP L+ EI W Q F HF +W QM EV+ E E
Sbjct: 1211 RAALRDVWNFNPDFLYPEIKAWIQDKFHSHFGAIWEQMHKEVVLEGDE 1258
>ref|XP_637255.1| hypothetical protein DDB0187437 [Dictyostelium discoideum]
gi|60465664|gb|EAL63743.1| hypothetical protein
DDB0187437 [Dictyostelium discoideum]
Length = 1461
Score = 369 bits (948), Expect = e-100
Identities = 254/782 (32%), Positives = 402/782 (50%), Gaps = 77/782 (9%)
Query: 2 KKVKGSVENDSNVVNETSSVEGININEINEAFEMPGSSSMQQTDRFSGYDEDDNNFDENE 61
++ K + + N + ++ V G +A + +++ T +D+DD+N ++++
Sbjct: 689 QQFKSDDQENQNNIKSSNLVYG-------DAEDFDFDNTVDDTFNIDNHDDDDDNDNDDD 741
Query: 62 SDSYDS----------------ETESELEFNDDDKNNHEGSKNNNNIVDVLGNEGSLASL 105
+D ++ E E+E + ++ E + V+ E
Sbjct: 742 NDDIENLDVLNDDQFIVNDEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEEEEVEE 801
Query: 106 KAAFENLSGQATLSSSNVNTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQ 165
+ E +++N N ED D+ ++G+E I E+ + G LFVLPLY+ LP + Q
Sbjct: 802 EEVEEEEEVDENENNNNNNNEDE-DEFEIGKEDIITEDDEKPAGPLFVLPLYSTLPTSKQ 860
Query: 166 LRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISK 225
+RVF G RLVVVATN+AETSLTIP IKYVVDTGR K + Y+ NG+ ++EV W SK
Sbjct: 861 MRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSK 920
Query: 226 ASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVA 285
ASA QRAGRAGRT GHCYR+YSSA F++ F +FS E+ +P+ G++L +KSM I+K+
Sbjct: 921 ASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKIT 980
Query: 286 NFPFPTSLKAASLLEAENCLRALEALDSKD-ELTLLGKAMALYPLSPRHSRMILTVIKNT 344
FPFPT +SL A L L AL+ K +T LG M+ +P+SPRHS+M+L
Sbjct: 981 GFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPVSPRHSKMLL------ 1034
Query: 345 RYKHIRNSSLLLAYAVAAAAALSLPNPFVMQ-YEGNDSNKDSETSEKSRMGDNENNIDK- 402
+ L Y +A + L++ +PF+ + YE N +N +++ + + + D+ + +K
Sbjct: 1035 ----LGQEHNCLPYIIAIVSILTVKDPFLKEAYEANQNNDENDDNNEKQQIDSSSQSEKE 1090
Query: 403 ---TEKTKRKKLKQTSKVAREKFRIVSSDALAI-----AYALQCFEHSQNSVQFCEDNAL 454
EK +R+K Q + + K+ SD L+I AY Q + ++ FC N L
Sbjct: 1091 FIEKEKEERQKHLQRLRNSMRKWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFL 1150
Query: 455 HFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEE 514
+ K+M E+ KLR QL +V N S +TL + + + P +E
Sbjct: 1151 NTKSMSEIHKLRHQLTEIVNSINQTNHELDPISNPIITLVNPDQSIK------PPTQKQE 1204
Query: 515 RLICRAICAGWADRVAKRIPISKAVDGETISR-AGRYQSCMV---------DESIFIHRW 564
I + I AG D+++K + ++++ G+ + YQ+C D + FIH
Sbjct: 1205 LFIKQVITAGLIDQISK-VKETQSITGKNHPKHLIEYQTCTTSYSNSSGGGDGTCFIHPT 1263
Query: 565 SSVSTVH--PEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSP 622
S++ V+ E+++Y +++ET RP YM VT ++P+WL K C
Sbjct: 1264 SNLGGVNTQAEYVIYCDIIETSRP-----------YMKLVTEINPSWLPLLGKPLCSEFK 1312
Query: 623 PLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCTC 682
PL P P Y + D+V+C + P +G WELP I + ++ FA ALLEG+V +
Sbjct: 1313 PLEQPAPHYSLKHDRVRCCIKPNYGVHHWELPMLKIDHPDKLESIRYFAKALLEGEVFSP 1372
Query: 683 LKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFSEIL 742
LK + Y++ P I++ Q +V LIS L S+ I + L W +NP LF + L
Sbjct: 1373 LKYLLPYLNTNPSIIVQMNT--QSKVYQLISTLKSKGISTKEKLLQQWIENPNYLFDQYL 1430
Query: 743 DW 744
W
Sbjct: 1431 SW 1432
>gb|AAH37964.1| DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapiens]
gi|38257651|sp|Q8IY37|DHX37_HUMAN Probable ATP-dependent
helicase DHX37 (DEAH-box protein 37)
gi|29029601|ref|NP_116045.2| DEAH (Asp-Glu-Ala-His) box
polypeptide 37 [Homo sapiens]
Length = 1157
Score = 306 bits (785), Expect = 1e-81
Identities = 204/622 (32%), Positives = 308/622 (48%), Gaps = 73/622 (11%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVVD G+ K + YD
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F P E+ + PV
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPPEITRRPVE 706
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE-------------- 316
++L +K++ ++KV NFPFPT +LL AE L AL AL +
Sbjct: 707 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 317 -LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQ 375
+T LG+ MA +P++PR+++M+ + L YA+ A++++ F
Sbjct: 767 PITALGRTMATFPVAPRYAKMLA----------LSRQHGCLPYAITIVASMTVRELF--- 813
Query: 376 YEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYA 435
E ++ D E K+++ + ++K+T A + + D + + A
Sbjct: 814 ----------EELDRPAASDEELTRLKSKRARVAQMKRT--WAGQGASLKLGDLMVLLGA 861
Query: 436 LQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLED 495
+ E++ + QFCE N L +K M E+ +LR QL V + L + T
Sbjct: 862 VGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQ 921
Query: 496 VEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMV 555
V ++ ++ + AG D +A+R+ + ++ + Y++ ++
Sbjct: 922 VTYLRQI------------------VTAGLGDHLARRVQSEEMLEDKW---RNAYKTPLL 960
Query: 556 DESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAK 615
D+ +FIH S + PEF+VY E++ET + YM GV++V+ W+
Sbjct: 961 DDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVSSVEVQWIPALLP 1009
Query: 616 SSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALL 675
S C F PL +P P Y + +V C F R W LP + R + FA LL
Sbjct: 1010 SYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLL 1069
Query: 676 EGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPR 735
EGQV L S R + + P T+L+ A Q R +L+ L + D L WK+NP+
Sbjct: 1070 EGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAWKKNPK 1129
Query: 736 ELFSEILDWFQQGFRKHFEELW 757
L +E +W Q E+ W
Sbjct: 1130 YLLAEYCEWLPQAMHPDIEKAW 1151
>ref|NP_976064.1| DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Mus musculus]
gi|51480476|gb|AAH80298.1| DEAH (Asp-Glu-Ala-His) box
polypeptide 37 [Mus musculus] gi|42406411|gb|AAH66077.1|
DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Mus musculus]
Length = 1150
Score = 306 bits (783), Expect = 2e-81
Identities = 206/633 (32%), Positives = 307/633 (47%), Gaps = 76/633 (12%)
Query: 143 NHDSSPGA---LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVV 199
N P A L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVV
Sbjct: 570 NEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVV 629
Query: 200 DTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEF 259
D G+ K + YD G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F
Sbjct: 630 DCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQF 688
Query: 260 SPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE--- 316
P E+ + PV ++L +K++ I+KV NFPFPT +L+ AE L AL AL + +
Sbjct: 689 PPPEITRRPVEDLILQMKALSIEKVINFPFPTPPSVEALVAAEELLVALGALQAPPKQER 748
Query: 317 ------------LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAA 364
+T LG+ M+ +P++PR+++M+ + L Y +A A
Sbjct: 749 MKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLA----------LSQQHGCLPYTIAIVA 798
Query: 365 ALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRI 424
A+++ F E R +E + + + + + + A + +
Sbjct: 799 AMTVRELF---------------EELDRPAASEKELAELKGRRARVAQMKRTWAGQGPSL 843
Query: 425 VSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQ 484
D + + A+ E++ S QFC+ N L +K M E+ +LR QL V + GL
Sbjct: 844 KLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFL 903
Query: 485 EYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETI 544
+ T V ++ ++ + AG D +A+R+ +D +
Sbjct: 904 DPKMQPPTESQVTYLRQI------------------MAAGLGDHLARRVQSEDLLDPKW- 944
Query: 545 SRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTN 604
Y++ ++D+ +FIH S + PEF+VY E++ET + YM GV+
Sbjct: 945 --KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVST 991
Query: 605 VDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVE 664
V+ W+ S C F PL +P P Y ++ QV C F R W LP +
Sbjct: 992 VEIQWIPSLLPSYCQFDAPLEEPAPSYCPESGQVLCHRASVFYRVGWPLPAVQVDFPEGI 1051
Query: 665 HRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSA 724
R + FA LLEGQV L S + + + P T+L+ A Q R L+ L + DS
Sbjct: 1052 DRYKYFAKFLLEGQVFRKLASFKSCLLSSPSTMLKTWARLQPRTETLLRALVAHKADSRD 1111
Query: 725 MLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
L WK+NP+ L +E +W + E+ W
Sbjct: 1112 SLLAAWKKNPKYLLAEYCEWLPKAMHSDVEKNW 1144
>dbj|BAD90451.1| mKIAA1517 protein [Mus musculus]
Length = 937
Score = 306 bits (783), Expect = 2e-81
Identities = 206/633 (32%), Positives = 307/633 (47%), Gaps = 76/633 (12%)
Query: 143 NHDSSPGA---LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVV 199
N P A L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVV
Sbjct: 357 NEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVV 416
Query: 200 DTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEF 259
D G+ K + YD G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F
Sbjct: 417 DCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQF 475
Query: 260 SPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE--- 316
P E+ + PV ++L +K++ I+KV NFPFPT +L+ AE L AL AL + +
Sbjct: 476 PPPEITRRPVEDLILQMKALSIEKVINFPFPTPPSVEALVAAEELLVALGALQAPPKQER 535
Query: 317 ------------LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAA 364
+T LG+ M+ +P++PR+++M+ + L Y +A A
Sbjct: 536 MKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLA----------LSQQHGCLPYTIAIVA 585
Query: 365 ALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRI 424
A+++ F E R +E + + + + + + A + +
Sbjct: 586 AMTVRELF---------------EELDRPAASEKELAELKGRRARVAQMKRTWAGQGPSL 630
Query: 425 VSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQ 484
D + + A+ E++ S QFC+ N L +K M E+ +LR QL V + GL
Sbjct: 631 KLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFL 690
Query: 485 EYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETI 544
+ T V ++ ++ + AG D +A+R+ +D +
Sbjct: 691 DPKMQPPTESQVTYLRQI------------------MAAGLGDHLARRVQSEDLLDPKW- 731
Query: 545 SRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTN 604
Y++ ++D+ +FIH S + PEF+VY E++ET + YM GV+
Sbjct: 732 --KNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVST 778
Query: 605 VDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVE 664
V+ W+ S C F PL +P P Y ++ QV C F R W LP +
Sbjct: 779 VEIQWIPSLLPSYCQFDAPLEEPAPSYCPESGQVLCHRASVFYRVGWPLPAVQVDFPEGI 838
Query: 665 HRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSA 724
R + FA LLEGQV L S + + + P T+L+ A Q R L+ L + DS
Sbjct: 839 DRYKYFARFLLEGQVFRKLASFKSCLLSSPSTMLKTWARLQPRTETLLRALVAHKADSRD 898
Query: 725 MLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
L WK+NP+ L +E +W + E+ W
Sbjct: 899 SLLAAWKKNPKYLLAEYCEWLPKAMHSDVEKNW 931
>gb|AAH02575.2| DHX37 protein [Homo sapiens]
Length = 984
Score = 304 bits (779), Expect = 6e-81
Identities = 203/622 (32%), Positives = 308/622 (48%), Gaps = 73/622 (11%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVVD G+ K + YD
Sbjct: 415 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 474
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F P E+ + PV
Sbjct: 475 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPPEITRRPVE 533
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE-------------- 316
++L +K++ ++KV NFPFPT +LL AE L AL AL +
Sbjct: 534 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 593
Query: 317 -LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQ 375
+T LG+ MA +P++PR+++M+ + L YA+ A++++ F
Sbjct: 594 PITALGRTMATFPVAPRYAKMLA----------LSRQHGCLPYAITIVASMTVRELF--- 640
Query: 376 YEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYA 435
E ++ D E K+++ + ++K+T A + + D + + A
Sbjct: 641 ----------EELDRPAASDEELTRLKSKRARVAQMKRT--WAGQGASLKLGDLMVLLGA 688
Query: 436 LQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLED 495
+ E++ + QFCE N L +K M E+ +LR QL V + L + T
Sbjct: 689 VGACEYAGCTPQFCEANGLRYKAMMEIRRLRGQLTTAVNAVCPEAELFVDPKMQPPTESQ 748
Query: 496 VEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMV 555
V ++ ++ + AG D +A+R+ + ++ + Y++ ++
Sbjct: 749 VTYLRQI------------------VTAGLGDHLARRVQSEEMLEDKW---RNAYKTPLL 787
Query: 556 DESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAK 615
D+ +FIH S + PEF+VY E++ET + YM GV++V+ W+
Sbjct: 788 DDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVSSVEVQWIPALLP 836
Query: 616 SSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALL 675
S C F PL +P P Y + +V C F R W LP + R + FA LL
Sbjct: 837 SYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLL 896
Query: 676 EGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPR 735
EGQV L S + + + P T+L+ A Q R +L+ L + D L WK+NP+
Sbjct: 897 EGQVFRKLASYQSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAWKKNPK 956
Query: 736 ELFSEILDWFQQGFRKHFEELW 757
L +E +W Q E+ W
Sbjct: 957 YLLAEYCEWLPQAMHPDIEKAW 978
>ref|XP_607648.1| PREDICTED: similar to mKIAA1517 protein, partial [Bos taurus]
Length = 735
Score = 303 bits (775), Expect = 2e-80
Identities = 211/660 (31%), Positives = 316/660 (46%), Gaps = 99/660 (15%)
Query: 137 EKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIK 196
+ + RE D+S L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIK
Sbjct: 130 QAMVREQPDASL-PLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIK 188
Query: 197 YVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEF 256
YVVD G+ K ++YD G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F
Sbjct: 189 YVVDCGKVKKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDF 247
Query: 257 PEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE 316
++ P E+ + PV ++L +K++ I+KV NFPFPT +L+ AE L AL AL + +
Sbjct: 248 EKYPPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPK 307
Query: 317 ---------------LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVA 361
+T LG+ MA +P++PR+++M+ + L Y +
Sbjct: 308 TERVKQLQRSRLSCPITELGRTMATFPVAPRYAKMLA----------LSRQHGCLPYTIT 357
Query: 362 AAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREK 421
AA+++ F E R ++ + + K KR ++ QT + K
Sbjct: 358 IVAAMTVRELF---------------EELDRPAASDEELARL-KGKRARVAQTPPSGQGK 401
Query: 422 FRIVS-SDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKG 480
+ D + + A+ E++ S QFCE N L +K M E+ +LR QL
Sbjct: 402 ELLXKLGDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMMEIRRLRGQL--------TTA 453
Query: 481 GLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLIC---------------------- 518
GL W H+ + S H L+ +C
Sbjct: 454 GLVWTSCWLHL----------LPSGHIQGSLLSTNTMCPEAGLFVDPKMQPPNEDQVTYL 503
Query: 519 -RAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVY 577
+ + AG D +A+++ VD + Y++ ++D+ +FIH S + PEF+VY
Sbjct: 504 RQIVTAGLGDHLARKVQSEDLVDDKW---KNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 560
Query: 578 NELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQ 637
E++ET + YM GV+ VD W+ S C F PL +P P Y + +
Sbjct: 561 QEIVET-----------TKMYMKGVSTVDMQWIPVLLPSYCQFDKPLEEPPPAYCPEKGR 609
Query: 638 VKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETI 697
+ C F R W LP + + FA LLEGQV L S + + + P T+
Sbjct: 610 MLCHRASVFYRVGWPLPAVQVDFPEGLDCYKHFARVLLEGQVFPKLASYKGCLLSSPSTM 669
Query: 698 LRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
L+ A Q R +L+ L ++ + L + W +NP+ L +E L+W Q E+ W
Sbjct: 670 LKTWARLQPRTESLLRALVAKKANCRDALLVAWSKNPKYLLTEYLEWLPQAVHADVEKAW 729
>ref|XP_213772.3| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 37
[Rattus norvegicus]
Length = 1194
Score = 295 bits (754), Expect = 5e-78
Identities = 202/611 (33%), Positives = 303/611 (49%), Gaps = 76/611 (12%)
Query: 143 NHDSSPGA---LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVV 199
N P A L VLPLY++L Q +VF EG RL V+ATNVAETSLTIPGIKYVV
Sbjct: 570 NEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVV 629
Query: 200 DTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEF 259
D G+ K + YD G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F
Sbjct: 630 DCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQF 688
Query: 260 SPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE--- 316
P E+ + PV ++L +K++ I+KV NFPFPT +L+ AE L AL AL + +
Sbjct: 689 PPPEITRRPVEDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQER 748
Query: 317 ------------LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAA 364
+T LG+ M+ +P++PR+++M+ + L Y +A A
Sbjct: 749 MKKLQMSQLSCPITALGRTMSTFPVAPRYAKMLA----------LSQQHGCLPYTIAIVA 798
Query: 365 ALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRI 424
A+++ F E ++ + E K +T+ ++K+T A + +
Sbjct: 799 AMTVRELF-------------EELDRPAASEEELAELKGRRTRVAQMKRT--WAGQGASL 843
Query: 425 VSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQ 484
D + + A+ E++ S QFC+ N L +K M E+ +LR QL V + GL
Sbjct: 844 KLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEAGLFL 903
Query: 485 EYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETI 544
+ T V ++ ++ + AG D +A+R+ +D +
Sbjct: 904 DPKMQPPTESQVTYLRQI------------------MAAGLGDHLARRVQSEDLLDPKW- 944
Query: 545 SRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTN 604
Y++ ++D+ +FIH S + PEF+VY E++ET + YM GV+
Sbjct: 945 --KNAYKTPLLDDPVFIHPSSVLFRELPEFVVYQEIVET-----------TKMYMKGVST 991
Query: 605 VDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVE 664
V+ W+ S C F PL +P P Y ++ +V C F R W LP +
Sbjct: 992 VEIQWIPSLLPSYCQFDAPLEEPAPTYCPESGRVLCHRASVFYRVGWPLPAVQVDFPEGI 1051
Query: 665 HRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSA 724
R + FA LLEGQV L S + + + P T+L+ A Q R L+ L ++ DS
Sbjct: 1052 DRYKYFARFLLEGQVFRKLASFKSCLLSSPNTMLKTWARLQPRTETLLRALVAQKADSRD 1111
Query: 725 MLRIVWKQNPR 735
L WK+NP+
Sbjct: 1112 SLLAAWKKNPK 1122
>dbj|BAA96041.1| KIAA1517 protein [Homo sapiens]
Length = 998
Score = 292 bits (748), Expect = 3e-77
Identities = 200/605 (33%), Positives = 299/605 (49%), Gaps = 73/605 (12%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L VLPLY++L Q +VF EG RL VVATNVAETSLTIPGIKYVVD G+ K + YD
Sbjct: 411 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 470
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
G+ ++ V W+S+ASA QRAGRAGRT GHCYRLYSSA F +F +F P E+ + PV
Sbjct: 471 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-GDFEQFPPPEITRRPVE 529
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKDE-------------- 316
++L +K++ ++KV NFPFPT +LL AE L AL AL +
Sbjct: 530 DLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 589
Query: 317 -LTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQ 375
+T LG+ MA +P++PR+++M+ + L YA+ A++++ F
Sbjct: 590 PITALGRTMATFPVAPRYAKMLA----------LSRQHGCLPYAITIVASMTVRELF--- 636
Query: 376 YEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYA 435
E ++ D E K+++ + ++K+T A + + D + + A
Sbjct: 637 ----------EELDRPAASDEELTRLKSKRARVAQMKRT--WAGQGASLKLGDLMVLLGA 684
Query: 436 LQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLED 495
+ E++ + QFCE N L +K M E+ +LR QL T V
Sbjct: 685 VGACEYASCTPQFCEANGLRYKAMMEIRRLRGQLT------------------TSVNAVC 726
Query: 496 VEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMV 555
E V P + + + + AG D +A+R+ + ++ + Y++ ++
Sbjct: 727 PEAELFVDPKMQPPTESQVTYLRQIVTAGLGDHLARRVQSEEMLEDKW---RNAYKTPLL 783
Query: 556 DESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAK 615
D+ +FIH S + PEF+VY E++ET + YM GV++V+ W+
Sbjct: 784 DDPVFIHPSSVLFKELPEFVVYQEIVET-----------TKMYMKGVSSVEVQWIPALLP 832
Query: 616 SSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALL 675
S C F PL +P P Y + +V C F R W LP + R + FA LL
Sbjct: 833 SYCQFDKPLEEPAPTYCPERGRVLCHRASVFYRVGWPLPAIEVDFPEGIDRYKHFARFLL 892
Query: 676 EGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPR 735
EGQV L S R + + P T+L+ A Q R +L+ L + D L WK+NP+
Sbjct: 893 EGQVFRKLASYRSCLLSSPGTMLKTWARLQPRTESLLRALVAEKADCHEALLAAWKKNPK 952
Query: 736 ELFSE 740
F +
Sbjct: 953 CEFDQ 957
>ref|XP_415104.1| PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box polypeptide 37
[Gallus gallus]
Length = 1142
Score = 288 bits (737), Expect = 5e-76
Identities = 207/656 (31%), Positives = 312/656 (47%), Gaps = 79/656 (12%)
Query: 122 NVNTEDSLDQSKV----GREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGER 177
+ T+D + S V G E S L+VLPLY++L Q +VF G R
Sbjct: 541 DAETDDDIAGSDVDLDLGDGDSEEEEKSDSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTR 600
Query: 178 LVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGR 237
L VVATNVAETSLTIPGIKYVVD G+ K + YD G+ ++ V WIS+ASA QRAGRAGR
Sbjct: 601 LCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDKITGVSSFRVTWISQASANQRAGRAGR 660
Query: 238 TAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAAS 297
T GHCYRLYSSA F +F +FS E+ K PV ++L +K++ I+KV NFPFPT +
Sbjct: 661 TEPGHCYRLYSSAVFM-DFEKFSAPEITKRPVEDLILQMKALNIEKVINFPFPTPPPTEA 719
Query: 298 LLEAENCLRALEALDS-------KDE--------LTLLGKAMALYPLSPRHSRMILTVIK 342
L AE L AL AL K++ ++ LG+ MA +P++PR+++M+
Sbjct: 720 LAAAEELLIALGALKEPPMTGRLKEQQAAKLSCPISPLGRVMATFPVAPRYAKMLA---- 775
Query: 343 NTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDK 402
+ L Y + +A+++ F E R +E K
Sbjct: 776 ------LSRQHDCLPYTITIVSAMTVRELF---------------EEFDRPAASEEETVK 814
Query: 403 TEKTKRKKLKQTSKV-AREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDE 461
K K+ +L Q ++ A + D + + A+ E+S + +FCE+N L +K M E
Sbjct: 815 L-KGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLE 873
Query: 462 MSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAI 521
+ +LR QL V GL V P + + + +
Sbjct: 874 IRRLRGQLTTAVNSVCTDAGL------------------YVDPKMKPPTEAQATYLRQIV 915
Query: 522 CAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELL 581
AG D +A+R+ + +D + Y++ ++D+ +FIH S + PEF+VY E++
Sbjct: 916 LAGLGDHLARRVQAEELLDDKW---KNAYKTALLDDPVFIHPSSVLFKQLPEFVVYQEIV 972
Query: 582 ETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCW 641
ET + YM GV+ V+P W+ C F PL +P P Y + +++C
Sbjct: 973 ET-----------TKLYMKGVSAVEPEWIPALLPPYCHFGKPLENPPPSYCPETGRIRCH 1021
Query: 642 VIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRRE 701
F R W+LP + R + FA LLEG+V L S + + + P +L+
Sbjct: 1022 RPSVFYRVSWQLPAVEVDYPEGIDRYKYFARFLLEGKVIEKLASYSQCLLSSPLIMLKTW 1081
Query: 702 ALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
+ Q R +L+ L + D+ L WK+NP+ L + W + + W
Sbjct: 1082 SKLQPRTESLLQALVAESCDNRDALLAAWKKNPKYLLAAYCQWIPEVMHDDVAKQW 1137
>emb|CAE69279.1| Hypothetical protein CBG15333 [Caenorhabditis briggsae]
Length = 1145
Score = 278 bits (712), Expect = 4e-73
Identities = 201/616 (32%), Positives = 307/616 (49%), Gaps = 69/616 (11%)
Query: 151 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 210
L+ LPLY++L Q RVFD G RL V++TNVAETSLTIPG+KYV+D G EK + YD
Sbjct: 572 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 631
Query: 211 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 270
S G+ + V IS+ASA QRAGRAGR +AGH YRLYSSA + +F +F+ E+ P
Sbjct: 632 SITGVSRFAVCRISQASADQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPAD 690
Query: 271 GVVLLLKSMQIKKVANFPFPTSLKAASLLEAENCLRALEALDSKD--------ELTLLGK 322
+VL LK+M I KV NFPFP++ L AE L L AL +T LGK
Sbjct: 691 QLVLHLKTMNIVKVVNFPFPSAPDEQMLEAAEKRLIRLGALSENTTTNGSTVARITKLGK 750
Query: 323 AMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSN 382
+A++PL+P +++ I ++ L+++A+ + LS+ P + S+
Sbjct: 751 TLAVFPLAPSYAKFIAMADQHD----------LMSHAILLISMLSVREPLIPV-----SS 795
Query: 383 KDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHS 442
T E+++ + KT +R+K + R D + +A E
Sbjct: 796 LRGSTPEETK------ELMKTVLKERRKWCSQTGARR------LGDLKVLVHAATVAEQV 843
Query: 443 QNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRV 502
+ + + CE L K + E KLRQQL +V K + V
Sbjct: 844 KYNARECEKVGLRVKALVEARKLRQQLTNIVNASCKKDQV------------------AV 885
Query: 503 SSAHYPLPLVEE-RLICRAICAGWADRVAKRIPISKAVDGETISRAGRYQSCMVDESIFI 561
A P P ++ +L+ + + A ++DR+A+R + ++V E + + G Y++ ++ E +FI
Sbjct: 886 LDADLPPPTDQQAQLLRQMVVASFSDRLARR--VDRSVGPEEVQK-GAYETTLITEHVFI 942
Query: 562 HRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFS 621
S + T PEF++Y EL++ ++ M V VD W+ A+S C F
Sbjct: 943 DPCSVLFTEEPEFVIYQELVQVN----------EKKLMTSVCAVDKEWISRLAESWCRFG 992
Query: 622 PPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCT 681
+ P YD+ D V V FG WELP + P+ + + + FA LL+GQV
Sbjct: 993 EQDKNQEPIYDSVKDAVVKTVKVAFGPLGWELPNENRPVPHDIMKYRYFAVFLLDGQVFE 1052
Query: 682 CLKSVRKYMSAPPETILRREALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFSEI 741
LK K + APP T+++ A QKR L++KL + + + A L+ W +N L E
Sbjct: 1053 KLKDFPKLL-APPSTMVKSWAKLQKRTEALLNKLIDKEVTTRASLKEQWLKNENWLLEEY 1111
Query: 742 LDWFQQGFRKHFEELW 757
L+W + + +W
Sbjct: 1112 LEWVPESIHQTVTMMW 1127
>gb|AAA27928.2| Hypothetical protein C06E1.10 [Caenorhabditis elegans]
gi|21431859|sp|P34305|YKQ0_CAEEL Putative ATP-dependent
RNA helicase C06E1.10 in chromosome III
gi|17552054|ref|NP_498895.1| kurz (3J700) [Caenorhabditis
elegans]
Length = 1148
Score = 277 bits (708), Expect = 1e-72
Identities = 203/641 (31%), Positives = 307/641 (47%), Gaps = 68/641 (10%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
N + L KV I D P L+ LPLY++L Q RVFD G RL V++T
Sbjct: 551 NGDGDLSDGKV-ENSIGAPPADCEP--LYCLPLYSLLSMGKQRRVFDETPAGMRLCVIST 607
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG+KYV+D G EK + YDS G+ + V IS+AS QRAGRAGR +AGH
Sbjct: 608 NVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHA 667
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA + +F +F+ E+ P +VL LKSM I KV NFPFP++ L AE
Sbjct: 668 YRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEK 726
Query: 304 CLRALEALD-------SKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLL 356
L L AL ++ +T LGK +A++PL+P +++ I ++ L+
Sbjct: 727 RLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHN----------LM 776
Query: 357 AYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSK 416
++A+ + LS+ P + S GD ++T++ + LK+ +
Sbjct: 777 SHAILLISLLSVREPLI--------------PVSSLRGDTP---EETKELMKNVLKERRR 819
Query: 417 VAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQ 476
D + +A E + + + CE L K + E KLRQQL +V
Sbjct: 820 WCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNAS 879
Query: 477 NDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPIS 536
K EH + S P + +L+ + + A ++DR+A+R +
Sbjct: 880 CKK-----------------EHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARR--VD 920
Query: 537 KAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKR 596
++V E + + G Y++ ++ +FI S V T PEF++Y EL++ ++
Sbjct: 921 RSVGQEEVQK-GAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVN----------EK 969
Query: 597 AYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKH 656
M V VD WL A+S C + + P YD D V V TFG WELP
Sbjct: 970 KLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELPNE 1029
Query: 657 SIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLN 716
+ + + + FA LL+G V LK + APP T+++ A QKR L++KL
Sbjct: 1030 NRSVPHDIMMYRYFALFLLDGLVFEKLKEYTPKLLAPPSTMVKSWAKLQKRTEMLLNKLI 1089
Query: 717 SRLIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
+ + + + L+ W +N L E L+W + + +W
Sbjct: 1090 EKEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMW 1130
>pir||H88533 probable ATP-dependent RNA helicase C06E1.10 - Caenorhabditis elegans
Length = 1152
Score = 275 bits (703), Expect = 4e-72
Identities = 204/641 (31%), Positives = 310/641 (47%), Gaps = 64/641 (9%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
N + L KV I D P L+ LPLY++L Q RVFD G RL V++T
Sbjct: 551 NGDGDLSDGKV-ENSIGAPPADCEP--LYCLPLYSLLSMGKQRRVFDETPAGMRLCVIST 607
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG+KYV+D G EK + YDS G+ + V IS+AS QRAGRAGR +AGH
Sbjct: 608 NVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHA 667
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA + +F +F+ E+ P +VL LKSM I KV NFPFP++ L AE
Sbjct: 668 YRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEK 726
Query: 304 CLRALEALD-------SKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLL 356
L L AL ++ +T LGK +A++PL+P +++ I ++ L+
Sbjct: 727 RLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHN----------LM 776
Query: 357 AYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSK 416
++A+ + LS+ P + S+ +T E+++ + K +R+ T
Sbjct: 777 SHAILLISLLSVREPLIPV-----SSLRGDTPEETK-----ELMKNVLKERRRWCSHTGA 826
Query: 417 VAREKFRIVSSDALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQ 476
+++ A + A Q H + + CE L K + E KLRQQL +V
Sbjct: 827 RRLGDLKVLMH---AASVAEQIKVHLDYNARECEKVGLRVKALVEARKLRQQLTNIVNAS 883
Query: 477 NDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRVAKRIPIS 536
K EH + S P + +L+ + + A ++DR+A+R +
Sbjct: 884 CKK-----------------EHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARR--VD 924
Query: 537 KAVDGETISRAGRYQSCMVDESIFIHRWSSVSTVHPEFLVYNELLETKRPNKEGETSAKR 596
++V E + + G Y++ ++ +FI S V T PEF++Y EL++ ++
Sbjct: 925 RSVGQEEVQK-GAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVN----------EK 973
Query: 597 AYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCWVIPTFGRFCWELPKH 656
M V VD WL A+S C + + P YD D V V TFG WELP
Sbjct: 974 KLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFGPLNWELPNE 1033
Query: 657 SIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRREALGQKRVGNLISKLN 716
+ + + + FA LL+G V LK + APP T+++ A QKR L++KL
Sbjct: 1034 NRSVPHDIMMYRYFALFLLDGLVFEKLKEYTPKLLAPPSTMVKSWAKLQKRTEMLLNKLI 1093
Query: 717 SRLIDSSAMLRIVWKQNPRELFSEILDWFQQGFRKHFEELW 757
+ + + + L+ W +N L E L+W + + +W
Sbjct: 1094 EKEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMW 1134
>gb|EAL32290.1| GA16807-PA [Drosophila pseudoobscura]
Length = 1202
Score = 274 bits (701), Expect = 7e-72
Identities = 200/639 (31%), Positives = 315/639 (48%), Gaps = 74/639 (11%)
Query: 115 QATLSSSNVNTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKE 174
+ S+ + N +D L G E + + P L+VLPLY++L + Q R+F V E
Sbjct: 607 EGAFSADDQNDDDVLG----GAEVSSMPSGPKQP--LWVLPLYSLLSSEKQNRIFQPVPE 660
Query: 175 GERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGR 234
G RL VV+TNVAETSLTIP IKYVVD GR+K + YD G+ + V + SKASA QRAGR
Sbjct: 661 GCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASAEQRAGR 720
Query: 235 AGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLK 294
AGR +AGHCYRLYSS+ + ++F EF ++++ PV ++L +++M I +V +FPFPT +
Sbjct: 721 AGRISAGHCYRLYSSSVYEHQFMEFGMPDIQQKPVDDLMLQMRTMGIDRVVHFPFPTPPE 780
Query: 295 AASLLEAENCLRALEAL-----DSKD---ELTLLGKAMALYPLSPRHSRMILTVIKNTRY 346
L AE L L AL D+KD +T LGK ++ +P++PR +M+
Sbjct: 781 QIQLQAAEQRLTILGALQATPNDAKDFPPAVTPLGKVISRFPVAPRFGKMLA-------- 832
Query: 347 KHIRNSSLLLAYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKT 406
+ + LL Y V AALS+ E +++ + E+ K K
Sbjct: 833 --LSHQQDLLPYTVCLVAALSV----------------QELLQETGVQRTEDVAPKANKF 874
Query: 407 KRKKLKQTSKVAREKFRIVSSDALAIAYALQCFEHSQNSVQ---FCEDNALHFKTMDEMS 463
K+L+ A F+++ D + + A+ E++ + Q FC +N L K + E+
Sbjct: 875 HEKRLRWA---AGGNFQLLG-DPMVLLRAVGAAEYAGSRAQLPEFCVNNGLRQKAISEVR 930
Query: 464 KLRQQLLRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICA 523
KLR QL + ++ + VE V P + RL+ + + A
Sbjct: 931 KLRVQLTNEI----------------NLNVSGVE--LSVDPQLKPPSDSQARLLRQILLA 972
Query: 524 GWADRVAKRIPISKAVDGETISRAGRYQSC--MVDESIFIHRWSSVSTVHPEFLVYNELL 581
G DRVA+++P+++ D E R +C MVD + F+H S + PE+++Y E
Sbjct: 973 GMGDRVARKVPLAEIADKEERRRLKYAYNCADMVDPA-FLHASSVLKQKTPEWIIYQEAY 1031
Query: 582 ETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCIFSPPLTDPRPFYDAQADQVKCW 641
E + + E + ++ G+T ++P WL+ C DP P ++A + ++ C+
Sbjct: 1032 ELRNDDSE------KMFLRGITAIEPEWLLLYVPLLCNMRDVRDDPPPRFEASSGKLLCF 1085
Query: 642 VIPTFGRFCWELPKHSIPISNVEHRVQVFAYALLEGQVCTCLKSVRKYMSAPPETILRRE 701
V TFG+ W LP I + E F LL G +C L + ++ + P T+++
Sbjct: 1086 VEATFGKAGWPLPLCEIAMPLSEKACCYFGMFLLAGDICPRLAAFKRKLRVTPATLIKSW 1145
Query: 702 ALGQKRVGNLISKLNSRLIDSSAMLRIVWKQNPRELFSE 740
+ +V L S+ I + L W P L E
Sbjct: 1146 SNLNDKVLRFKRALISKEIHTRQALHEQWASEPNFLLEE 1184
>emb|CAA88553.1| unknown [Saccharomyces cerevisiae] gi|6323776|ref|NP_013847.1|
Essential DEAH-box ATP-dependent RNA helicase specific to
the U3 snoRNP, predominantly nucleolar in distribution,
required for 18S rRNA synthesis; Ecm16p [Saccharomyces
cerevisiae] gi|2500542|sp|Q04217|DHR1_YEAST Probable
ATP-dependent RNA helicase DHR1 (DEAH-box RNA helicase
DHR1) (Extracellular matrix protein 16)
Length = 1267
Score = 270 bits (690), Expect = 1e-70
Identities = 184/553 (33%), Positives = 293/553 (52%), Gaps = 66/553 (11%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
N ED D+ + G E++ E ++ L+VLPLY++LP Q+RVF +G RL +VAT
Sbjct: 703 NGEDEEDEEEEGFEEVLTEGQTAND-PLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVAT 761
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG++YVVD+GR K + Y+ SNG++++EV W+SKASA QR+GRAGRT GHC
Sbjct: 762 NVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHC 821
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA F ++F +FS E+ ++PV +VL +KSM I + NFPFPT +L +A
Sbjct: 822 YRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQ 881
Query: 304 CLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAA 363
L+ L ALD+K+ +T GK M+L+PLSPR S+M+L + + L Y VA
Sbjct: 882 LLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLL----------VSDEKACLPYIVAIV 931
Query: 364 AALSLPNPFVMQYE------GNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKV 417
+ALS+ +PF+ ++E N D +K R +++ + + +K+L+
Sbjct: 932 SALSVGDPFINEFELGINEISRKPNPDENLDDKIR--EHDESTPGMDPELKKELRSKFYK 989
Query: 418 AREKFRIVS--SDA---LAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQLLRL 472
+R +F + SD L++ A+ Q + F + N L K M+E+ KLR+QL+ +
Sbjct: 990 SRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQKEI-FMKKNFLRGKLMEEIVKLRKQLMYI 1048
Query: 473 VFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLP-LVEERLICRAICAGWADRVAK 531
+ K E++ V R +P +++ +L+ + ICAG+ D VA
Sbjct: 1049 IKSNTSK--------------ENIAVVIRNEDLKSDIPSVIQIKLLKQMICAGFVDHVAV 1094
Query: 532 RIPISKAVDGETISRAGRYQSCMV-----------DESIFIHRWS---SVSTVHPEFLVY 577
R + D + +R + D ++IH S ++ + P++++Y
Sbjct: 1095 RADVLFPDDAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSILNNLGEMPPKYMLY 1154
Query: 578 NELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI--FSPPLT-DPRPFYDAQ 634
L + G + M+ + ++ T L A+ + +S PLT +
Sbjct: 1155 YSL------HLGGNNKTR---MNTLCDIASTPLANIARKGLLLTYSKPLTGQGLKTVNLS 1205
Query: 635 ADQVKCWVIPTFG 647
+ C+V+P FG
Sbjct: 1206 PTERYCYVVPRFG 1218
>gb|AAS53593.1| AFR222Wp [Ashbya gossypii ATCC 10895] gi|45198740|ref|NP_985769.1|
AFR222Wp [Eremothecium gossypii]
Length = 1234
Score = 268 bits (686), Expect = 4e-70
Identities = 183/547 (33%), Positives = 287/547 (52%), Gaps = 70/547 (12%)
Query: 124 NTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVAT 183
+TEDS ++ E E S L+VLPLY++LP Q++VF +G RL VVAT
Sbjct: 690 HTEDSEEEEGFEEEL---EEGQSENDPLYVLPLYSLLPTKEQMKVFADPPKGSRLCVVAT 746
Query: 184 NVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHC 243
NVAETSLTIPG++YVVD GR K +NY+ +G++++E++WISKASA QR+GRAGRT GHC
Sbjct: 747 NVAETSLTIPGVRYVVDCGRSKERNYNEESGVQSFEIEWISKASADQRSGRAGRTGPGHC 806
Query: 244 YRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAEN 303
YRLYSSA + +F +FS E+ ++PV VVL +KSM I +V NFPFPT + +L +A
Sbjct: 807 YRLYSSAVYERDFQQFSRPEILRMPVETVVLQMKSMSIHRVTNFPFPTPPERTALGKAVE 866
Query: 304 CLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAA 363
L+ L ALD + +T G+ M+L+PLSPR ++M+L + + L Y VA
Sbjct: 867 LLQHLGALDESERITADGRKMSLFPLSPRFAKMLL----------VSDEQGCLPYIVAIV 916
Query: 364 AALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFR 423
+ LS+ +PF+ + E D++ + + ++++L+ +R KF
Sbjct: 917 SILSVGDPFISENELGIDQVDAQ----------DGGVPHGSDEQKRQLRARFHKSRAKFS 966
Query: 424 IVS--SDALAIAYALQCFEH--SQNSVQFCEDNALHFKTMDEMSKLRQQLLRLVFFQNDK 479
+ SD + A+ ++ ++ QF D+ L K MDE+ KLR+Q+L ++ +
Sbjct: 967 KLDPHSDVFRLLSAVSALDYVPTERRNQFLHDHFLRGKVMDEVCKLRKQVLYIIRANTSR 1026
Query: 480 GGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPL-VEERLICRAICAGWADRVAKRIPISKA 538
+ V + D E P+P + RL+ + + AG+ D+VA R +
Sbjct: 1027 DNVA-------VAIRDEE-------LRVPVPSPTQLRLLKQMVAAGFIDQVAARADLLYP 1072
Query: 539 VDGETISRA-----------GRYQSCMVDESIFIHRWSSVST---VHPEFLVYNELLETK 584
D +RA RY + D +++H S ++T + P ++VY+ L
Sbjct: 1073 DDAPLANRAALTGIPYLPVLARYTRPISDAFVYVHSASVLATSSDLPPAYVVYHSL---- 1128
Query: 585 RPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI--FSPPLTDP--RPFYDAQADQVKC 640
++ M + ++ T L A+S C+ +S PL RP + A + C
Sbjct: 1129 -----HRSATGTVRMRPLCDIKSTPLANVARSGCLLTYSKPLITKGLRP-HTVSAVERYC 1182
Query: 641 WVIPTFG 647
+V P FG
Sbjct: 1183 YVTPRFG 1189
>emb|CAG98571.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50311673|ref|XP_455863.1| unnamed protein product
[Kluyveromyces lactis]
Length = 1271
Score = 267 bits (682), Expect = 1e-69
Identities = 197/575 (34%), Positives = 302/575 (52%), Gaps = 72/575 (12%)
Query: 118 LSSSNVNTEDSLDQSKVGREKIARENH-DSSPGALFVLPLYAMLPAAAQLRVFDGVKEGE 176
L S + ED + + G E+ E D P L+VLPLY++LP Q++VF
Sbjct: 708 LLSDEEDIEDKEEDEEEGFEETLEEGQTDRDP--LYVLPLYSLLPTKEQMKVFLDPPPNS 765
Query: 177 RLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAG 236
RL VVATNVAETSLTIPG++YVVD GR K + +D +NG++++E+ WISKASA QR+GRAG
Sbjct: 766 RLCVVATNVAETSLTIPGVRYVVDCGRSKERKFDENNGVQSFEIDWISKASAGQRSGRAG 825
Query: 237 RTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAA 296
RT GHCYRLYSSA F +F +FS E+ ++PV +VL +KSM + + NFPFPT +
Sbjct: 826 RTGPGHCYRLYSSAVFERDFEQFSKPEILRMPVESIVLQMKSMAVHNIVNFPFPTPPERP 885
Query: 297 SLLEAENCLRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLL 356
+L+++ L+ L ALDS + +T GKAM+L+PLSPR S+M+L + N S L
Sbjct: 886 ALMKSIKLLQHLGALDSNERITDDGKAMSLFPLSPRFSKMLL----------VGNESDCL 935
Query: 357 AYAVAAAAALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSK 416
Y V +ALS+ PF+ + E + +T ++ ++ D ++ E +RK+L + SK
Sbjct: 936 KYVVTIVSALSVGEPFLSEQELGIMDTVPKTQDEGQLDDYPDH----EAEERKRLLR-SK 990
Query: 417 VAREKFRIVSSD-------ALAIAYALQCFEHSQNSVQFCEDNALHFKTMDEMSKLRQQL 469
+ K R D L+ AL Q+S F E N L KT++E+ KLR+Q+
Sbjct: 991 YVKSKIRFSKLDKFSDVFRLLSAVSALDFIPKDQHS-SFMEKNFLRAKTVEEIMKLRKQV 1049
Query: 470 LRLVFFQNDKGGLEQEYSWTHVTLEDVEHVWRVSSAHYPLPLVEERLICRAICAGWADRV 529
+ ++ + +E +V ED++ + P V+ +L+ + I AG+ D+V
Sbjct: 1050 MFII-----RSVTSRENVAVNVKDEDLK-------SSIPTD-VQIKLLKQMITAGFIDQV 1096
Query: 530 AKR----IPISKAVDGETISR------AGRYQSCMVDESIFIHRWSSVST---VHPEFLV 576
A R P ++ I S + D ++IH S ++ P++LV
Sbjct: 1097 AVRADQLFPEDVTINKTNIFNIPYVPVLAEKTSSLDDIFVYIHPTSILNNSGEQPPKYLV 1156
Query: 577 YNELLETKRPNKEGETSAKRAYMHGVTNVDPTWLVENAKSSCI--FSPPLTDP--RPFYD 632
+ L NK E + R M + ++ T L A+ + + P+T +P D
Sbjct: 1157 FQSL----HVNKNNEKAKTR--MKSLCDIKSTPLANVARKGSLLTYGKPITGQGLKPI-D 1209
Query: 633 AQADQVKCWVIPTFG-------RFCWELPKHSIPI 660
+ C+V+P FG + WEL + IP+
Sbjct: 1210 LSPTERFCYVVPRFGSCNDSDIKIGWEL--NPIPV 1242
>emb|CAG61351.1| unnamed protein product [Candida glabrata CBS138]
gi|50291915|ref|XP_448390.1| unnamed protein product
[Candida glabrata]
Length = 1295
Score = 266 bits (680), Expect = 2e-69
Identities = 171/475 (36%), Positives = 257/475 (54%), Gaps = 45/475 (9%)
Query: 125 TEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATN 184
T+D+ D + E++ + P L+VLPLY++LP Q++VF+ +G R+ +VATN
Sbjct: 740 TDDNSDDEEGFDEELTDDQTPDDP--LYVLPLYSLLPTKEQMKVFESPPKGSRMCIVATN 797
Query: 185 VAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCY 244
VAETSLTIPG++YVVD GR K + Y++SNG++++EV W+SKASA QR+GRAGRT GHCY
Sbjct: 798 VAETSLTIPGVRYVVDCGRVKERKYNNSNGVQSFEVGWVSKASADQRSGRAGRTGPGHCY 857
Query: 245 RLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQIKKVANFPFPTSLKAASLLEAENC 304
RLYSSA F +F +FS E+ ++PV VVL +KSM I + NFPFPT SL +A
Sbjct: 858 RLYSSAVFDRDFEQFSKPEILRMPVESVVLQMKSMAIHNIVNFPFPTPPDKESLKKAIEL 917
Query: 305 LRALEALDSKDELTLLGKAMALYPLSPRHSRMILTVIKNTRYKHIRNSSLLLAYAVAAAA 364
L+ L ALD K+++T GK M+L+PLSPR S+M+L + N + Y V+ +
Sbjct: 918 LQYLGALDDKEKVTEDGKKMSLFPLSPRFSKMLL----------VSNEHGCMPYIVSIIS 967
Query: 365 ALSLPNPFVMQYEGNDSNKDSETSEKSRMGDNENNIDKTEKTKRKKLKQTSKVAREKFRI 424
ALS+ +PF+ + E + ID E + K L+ +R KF
Sbjct: 968 ALSVGDPFLTEQELGIQQAQVVKRDDGNESAQLEFIDSQEVERVKNLRNKFYKSRVKFSK 1027
Query: 425 VS--SDALAIAYALQCFEHSQNSVQ--FCEDNALHFKTMDEMSKLRQQLLRLVFFQNDKG 480
+ SD + + + N + F N L K MDE+ KLR+QL +V K
Sbjct: 1028 LDKYSDVFKLLSVTCAWNYVPNKQRDDFVRSNFLRRKVMDEIEKLRRQLTYIV-----KS 1082
Query: 481 GLEQEYSWTHVTLEDVEHVWRVSSAHYPLPL-VEERLICRAICAGWADRVAKR----IPI 535
+E ++T ED+ LP ++ +++ + IC G+ D+VA R P
Sbjct: 1083 NTSKESIAINITNEDL---------RTDLPSEIQLKMLKQMICVGFIDKVAIRADALYPE 1133
Query: 536 SKAVDGETISR-------AGRYQSCMVDESIFIHRWSSVSTV---HPEFLVYNEL 580
+ T+ G+ + + D ++IH S ++ + P+F+VYN L
Sbjct: 1134 EAKITNRTVINKIPYLPVMGKLANDVNDSFVYIHPSSMINNIGELPPKFIVYNTL 1188
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,294,351,746
Number of Sequences: 2540612
Number of extensions: 54545572
Number of successful extensions: 473802
Number of sequences better than 10.0: 3995
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 2429
Number of HSP's that attempted gapping in prelim test: 343479
Number of HSP's gapped (non-prelim): 38973
length of query: 789
length of database: 863,360,394
effective HSP length: 136
effective length of query: 653
effective length of database: 517,837,162
effective search space: 338147666786
effective search space used: 338147666786
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)
Medicago: description of AC147012.5