BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146914.1 + phase: 0 /pseudo
(369 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ65157.1| At3g48120 [Arabidopsis thaliana] gi|42565712|ref|... 333 6e-90
emb|CAB41127.1| putative protein [Arabidopsis thaliana] gi|74871... 297 3e-79
dbj|BAD82543.1| unknown protein [Oryza sativa (japonica cultivar... 278 2e-73
ref|NP_916995.1| P0519D04.17 [Oryza sativa (japonica cultivar-gr... 196 7e-49
gb|AAO52434.1| similar to Arabidopsis thaliana (Mouse-ear cress)... 98 5e-19
ref|XP_643160.1| putative STE20 family protein kinase [Dictyoste... 96 2e-18
ref|XP_422823.1| PREDICTED: similar to BM-011 protein [Gallus ga... 95 3e-18
ref|XP_636971.1| hypothetical protein DDB0187704 [Dictyostelium ... 93 1e-17
emb|CAA52503.1| early protein [Human papillomavirus type 14D] gi... 91 4e-17
gb|AAH81213.1| MGC84816 protein [Xenopus laevis] 91 7e-17
emb|CAE59627.1| Hypothetical protein CBG03040 [Caenorhabditis br... 90 1e-16
emb|CAA85414.2| Hypothetical protein D2089.1a [Caenorhabditis el... 89 3e-16
ref|XP_330498.1| hypothetical protein [Neurospora crassa] gi|289... 89 3e-16
ref|NP_001016318.1| hypothetical protein LOC549072 [Xenopus trop... 89 3e-16
gb|AAH76555.1| Unknown (protein for IMAGE:7044154) [Danio rerio] 88 5e-16
gb|AAH45992.1| Similar to RIKEN cDNA 2610015J01 gene [Danio reri... 88 5e-16
ref|NP_067062.1| RNA binding motif protein 25 [Homo sapiens] 87 6e-16
gb|AAF19255.1|AC004858_3 U1 small ribonucleoprotein 1SNRP homolo... 87 6e-16
ref|XP_641608.1| putative CMGC family protein kinase [Dictyostel... 87 6e-16
gb|AAC97961.1| S164 [Homo sapiens] 87 6e-16
>gb|AAQ65157.1| At3g48120 [Arabidopsis thaliana] gi|42565712|ref|NP_190395.3|
expressed protein [Arabidopsis thaliana]
gi|51971096|dbj|BAD44240.1| putative protein
[Arabidopsis thaliana] gi|51971064|dbj|BAD44224.1|
putative protein [Arabidopsis thaliana]
Length = 328
Score = 333 bits (853), Expect = 6e-90
Identities = 200/372 (53%), Positives = 256/372 (68%), Gaps = 48/372 (12%)
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASS 60
MEEEKAAAYYDELTRKGEGAA+FKQGLGFST + AVP+ GS++ SSSSFL+QFVKAS+
Sbjct: 1 MEEEKAAAYYDELTRKGEGAARFKQGLGFSTGAN--AVPERGSAIASSSSFLNQFVKASN 58
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS 120
+ +T ++ S+++SI++KLKKKP + RV E++ R+ S R RR RS
Sbjct: 59 HTKST---------DNKDSEIRSIRDKLKKKPE-DPRVPERSYRESSER------RRYRS 102
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE 180
R R+ RD+ RRRSRS ER S Y DR+R R SRSRS +R DR R R
Sbjct: 103 RERDE-RDKSHRRRSRSSERRSSYVDRERRR------SRSRSAERRNRYGDRESRRRSN- 154
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVK 240
RSRS+SPR++RRS DVKE+ DY++LI GYD M+ AE+VK
Sbjct: 155 ----RSRSLSPRRERRSR---EDVKEKKP------------DYSRLIKGYDEMSAAEKVK 195
Query: 241 AKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEV-EGAEDDASLVKHIGQSFRFSAV 299
AKMKLQL ETA +D+ +G GWERFEF+K+AP+DDEE+ EGA+DDA+LVK +GQS+RFSA+
Sbjct: 196 AKMKLQLDETAEKDTSKGAGWERFEFDKEAPVDDEELEEGADDDAALVKRMGQSYRFSAI 255
Query: 300 ESKREDQIQAAHDEAMFGAPAPPPPTSST-DSEPERENEKEVDNKKDL-VSSLLSETVLA 357
E+KRE+Q++AAHDEAMFG P PT +T D E N K+ + + + SLLSE VLA
Sbjct: 256 EAKREEQLKAAHDEAMFGVPTGQTPTENTGDDVTEITNVKDDEGESNSGAISLLSEKVLA 315
Query: 358 RPKGSWRDRVRQ 369
+ +GSWRDR R+
Sbjct: 316 KQQGSWRDRARK 327
>emb|CAB41127.1| putative protein [Arabidopsis thaliana] gi|7487115|pir||T06671
hypothetical protein T17F15.10 - Arabidopsis thaliana
Length = 347
Score = 297 bits (761), Expect = 3e-79
Identities = 188/366 (51%), Positives = 241/366 (65%), Gaps = 56/366 (15%)
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASS 60
MEEEKAAAYYDELTRKGEGAA+FKQGLGFST + AVP+ GS++ SSSSFL+QFVKAS+
Sbjct: 1 MEEEKAAAYYDELTRKGEGAARFKQGLGFSTGAN--AVPERGSAIASSSSFLNQFVKASN 58
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS 120
+ +T ++ S+++SI++KLKKKP + RV E++ R+ S R RR RS
Sbjct: 59 HTKST---------DNKDSEIRSIRDKLKKKPE-DPRVPERSYRESSER------RRYRS 102
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE 180
R R+ RD+ RRRSRS ER S Y DR+R R SRSRS +R DR R R
Sbjct: 103 RERDE-RDKSHRRRSRSSERRSSYVDRERRR------SRSRSAERRNRYGDRESRRRSN- 154
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVK 240
RSRS+SPR++RRS DVKE+ DY++LI GYD M+ AE+VK
Sbjct: 155 ----RSRSLSPRRERRSR---EDVKEKKP------------DYSRLIKGYDEMSAAEKVK 195
Query: 241 AKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEV-EGAEDDASLVKHIGQSFRFS-- 297
AKMKLQL ETA +D+ +G GWERFEF+K+AP+DDEE+ EGA+DDA+LVK +GQS+R S
Sbjct: 196 AKMKLQLDETAEKDTSKGAGWERFEFDKEAPVDDEELEEGADDDAALVKRMGQSYRASDS 255
Query: 298 ------AVESKREDQIQAAHDEAMFGAPAPPPPTSST-DSEPERENEKEVDNKKDL-VSS 349
++KRE+Q++AAHDEAMFG P PT +T D E N K+ + + + S
Sbjct: 256 LYGLIKTCKAKREEQLKAAHDEAMFGVPTGQTPTENTGDDVTEITNVKDDEGESNSGAIS 315
Query: 350 LLSETV 355
LLSE V
Sbjct: 316 LLSEKV 321
>dbj|BAD82543.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 349
Score = 278 bits (710), Expect = 2e-73
Identities = 180/379 (47%), Positives = 220/379 (57%), Gaps = 47/379 (12%)
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTST--SNDAVPKPGSSLVSSSSFLSQFVKA 58
MEEEKAAAYYDEL+RKGEGA +FKQGLGFS+S S KP S+ SSSFLS FV+A
Sbjct: 1 MEEEKAAAYYDELSRKGEGARRFKQGLGFSSSDPQSTSFPSKPPST---SSSFLSGFVRA 57
Query: 59 SSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS 118
+ T AP+ ++ + SR + R + S R RR
Sbjct: 58 GA--------TPAPAQPTKQPPPPPPPPHEPSRTGRHSRSPSPSRRHRTRSSSPSRSRRH 109
Query: 119 RSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERG 178
RSRSRER R SR R R R SR R R R R R RS +R DRR+ + G
Sbjct: 110 RSRSRERRRRSRSREREREDRRASRRRSRSRSRSRSPSRRSGRSSYSENRHGDRRRDDGG 169
Query: 179 REKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAER 238
+G + R +E GK VDY++LI GYD M PAER
Sbjct: 170 GRRGSSKGRGG---------------REGGK-----------VDYSRLIEGYDRMTPAER 203
Query: 239 VKAKMKLQLSETAARDSDRG---VGWERFEFNKDAPL--DDEEVEGAEDDASLVKHIGQS 293
VKAKMKLQLSETA++DS G VGWERFEFNKDAPL DD +VE A DDASLVKHIG+S
Sbjct: 204 VKAKMKLQLSETASKDSTLGNATVGWERFEFNKDAPLDEDDNDVEVANDDASLVKHIGKS 263
Query: 294 FRFSAVESKREDQIQAAHDEAMFGAPA-PPPPTSSTDSEPER--ENEKEVDNKKDLVSSL 350
FR SAV+SK ED ++ AH+ A+FG PA P T +T++EPE E+EK D + + SSL
Sbjct: 264 FRLSAVQSKHEDTVRDAHENAIFGVPAYPIVDTETTEAEPETNDESEKAKDVEAEPSSSL 323
Query: 351 LSETVLARPKGSWRDRVRQ 369
+S+ VLA GSWR+R ++
Sbjct: 324 ISDKVLATQSGSWRERAQK 342
>ref|NP_916995.1| P0519D04.17 [Oryza sativa (japonica cultivar-group)]
Length = 353
Score = 196 bits (499), Expect = 7e-49
Identities = 154/367 (41%), Positives = 192/367 (51%), Gaps = 79/367 (21%)
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTST--SNDAVPKPGSSLVSSSSFLSQFVKA 58
MEEEKAAAYYDEL+RKGEGA +FKQGLGFS+S S KP S+ SSSFLS FV+A
Sbjct: 1 MEEEKAAAYYDELSRKGEGARRFKQGLGFSSSDPQSTSFPSKPPST---SSSFLSGFVRA 57
Query: 59 SSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS 118
+ T AP+ K P +T R +S S R+ R+
Sbjct: 58 GA--------TPAPAQP----------TKQPPPPPPPPHEPSRTGR-HSRSPSPSRRHRT 98
Query: 119 RSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERG 178
RS S R R R RSRSRER R SRSR +R R+ R+ R
Sbjct: 99 RSSSPSRSR----RHRSRSRERRRR--------------SRSR-----EREREDRRASRR 135
Query: 179 REKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAER 238
R + R RSRS S R R S ++ R R+G + G
Sbjct: 136 RSRSRSRSRSPSRRSGRSSYSENRHGDRRRDDGGGRRGSSKGRGGR-------------- 181
Query: 239 VKAKMKLQLSETAARDSDRG---VGWERFEFNKDAPLD--DEEVEGAEDDASLVKHIGQS 293
E A++DS G VGWERFEFNKDAPLD D +VE A DDASLVKHIG+S
Sbjct: 182 ----------EGASKDSTLGNATVGWERFEFNKDAPLDEDDNDVEVANDDASLVKHIGKS 231
Query: 294 FRFSAVESKREDQIQAAHDEAMFGAPA-PPPPTSSTDSEPER--ENEKEVDNKKDLVSSL 350
FR SAV+SK ED ++ AH+ A+FG PA P T +T++EPE E+EK D + + SSL
Sbjct: 232 FRLSAVQSKHEDTVRDAHENAIFGVPAYPIVDTETTEAEPETNDESEKAKDVEAEPSSSL 291
Query: 351 LSETVLA 357
+S+ V++
Sbjct: 292 ISDKVIS 298
>gb|AAO52434.1| similar to Arabidopsis thaliana (Mouse-ear cress). Hypothetical
75.4 kDa protein [Dictyostelium discoideum]
Length = 1028
Score = 97.8 bits (242), Expect = 5e-19
Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 18/256 (7%)
Query: 14 TRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQ---FVKASSSSTTTTASTT 70
T K + + S S S+D+ SS SS + S + K SSS+++ +
Sbjct: 672 TSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRD 731
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
+ DR ++ +N + + + R E+ +R SRD DR + R R R RER RDR
Sbjct: 732 RERERDRDRSNKTYKNS-RSRNVSRDRERER-DRHNRSRDRDRERERERDRDRERDRDR- 788
Query: 131 SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRS-----DSDVDRGRDR---RKRER---GR 179
SR RSR R R+ R DR RDR RD RSR RS + D DR RDR R R R R
Sbjct: 789 SRDRSRDRSRD-RERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRSRSRDSDSR 847
Query: 180 EKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERV 239
++ R RSRS S R++ RS + ++R S+ + ++ DY + + + R
Sbjct: 848 DRSRDRSRSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRDRDYKSSKYKKSSRGTSGRK 907
Query: 240 KAKMKLQLSETAARDS 255
K++ +L A S
Sbjct: 908 NNKIQSKLDSQATHIS 923
Score = 92.4 bits (228), Expect = 2e-17
Identities = 73/202 (36%), Positives = 103/202 (50%), Gaps = 25/202 (12%)
Query: 32 STSNDAVPKP---------GSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQ 82
S S A+ KP S+ S+ S Q +ASS S ++ +++ S + S+ +
Sbjct: 651 SASGSALSKPPSPSSDKENNSTSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYE 710
Query: 83 SIQNKLKKKPTTESRVSEKTNRDYSSRDSDR-RKRRSRSRSRERYRDRDSRR----RSRS 137
S + KKK ++ S + K +R+ RD DR K SRSR RDR+ R RSR
Sbjct: 711 SDRKSYKKKKSSSSSSNSKRDRE-RERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRD 769
Query: 138 RER-NSRYSDRDRDRDRDSGRSRSRS---DSDVDRGRDR-----RKRERGREKGRRRSRS 188
R+R R DRDR+RDRD R RSR D + DR RDR R R+R R++ R R R
Sbjct: 770 RDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRD 829
Query: 189 VS-PRKQRRSEVKSSDVKERGK 209
S R + RS + SD ++R +
Sbjct: 830 RSRDRSRDRSRSRDSDSRDRSR 851
Score = 70.9 bits (172), Expect = 6e-11
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 24/180 (13%)
Query: 43 SSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKT 102
SS+ S+ ++ + + AS S+ + S ++ +++ S+ +++ + ++ S S+ T
Sbjct: 637 SSISSNGAYNRELISASGSALSKPPSPSSDKENNSTSKSNKSKSRQSSRASSLSESSDST 696
Query: 103 NR-----DYSSR-DSDRR---KRRSRS------RSRERYRDRDSRRRSRSRERNSRYSDR 147
+ ++SSR +SDR+ K++S S R RER RDRD RS +NSR +
Sbjct: 697 SHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRDRERERDRD---RSNKTYKNSRSRNV 753
Query: 148 DRDRDRDSGRSRSRSDSDVDRGRDR---RKRERGREKGRRRSRSVSPRKQR-RSEVKSSD 203
RDR+R+ R R D DR R+R R RER R++ R RSR S ++R RS +S D
Sbjct: 754 SRDRERE--RDRHNRSRDRDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRD 811
>ref|XP_643160.1| putative STE20 family protein kinase [Dictyostelium discoideum]
gi|60471279|gb|EAL69242.1| putative protein
serine/threonine kinase [Dictyostelium discoideum]
Length = 1028
Score = 95.5 bits (236), Expect = 2e-18
Identities = 73/202 (36%), Positives = 102/202 (50%), Gaps = 25/202 (12%)
Query: 32 STSNDAVPKP---------GSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQ 82
S S A+ KP S+ S+ S Q +ASS S ++ +++ S + S+ +
Sbjct: 651 SASGSALSKPPSPSSDKENNSTSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYE 710
Query: 83 SIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR-------RSRSRSRERYRDRDSRRRS 135
S + KKK ++ S + K +R+ RD DR + R+ SR RER RDR +R R
Sbjct: 711 SDRKSYKKKKSSSSSSNSKRDRE-RERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRD 769
Query: 136 RSRERN-----SRYSDRDRDRDRDSGRSRSRS-DSDVDRGRDR-RKRERGREKGRRRSRS 188
R RER R DRDR RDR RSR R D DR RDR R R+R R++ R R R
Sbjct: 770 RDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRD 829
Query: 189 VS-PRKQRRSEVKSSDVKERGK 209
S R + RS + SD ++R +
Sbjct: 830 RSRDRSRDRSRSRDSDSRDRSR 851
Score = 88.2 bits (217), Expect = 4e-16
Identities = 79/263 (30%), Positives = 118/263 (44%), Gaps = 32/263 (12%)
Query: 14 TRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQ---FVKASSSSTTTTASTT 70
T K + + S S S+D+ SS SS + S + K SSS+++ +
Sbjct: 672 TSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRD 731
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
+ DR ++ +N + + + R E+ +R SRD DR + R R R RER RDR
Sbjct: 732 RERERDRDRSNKTYKNS-RSRNVSRDRERER-DRHNRSRDRDRERERERDRDRERDRDRS 789
Query: 131 ---SRRRSRSRERN---------------SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR 172
SR RSR RER+ SR R+RDRDR RSR RS R RD
Sbjct: 790 RDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRS-----RSRDS 844
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDN 232
R+R R+ RSRS S R++ RS + ++R S+ + ++ DY + +
Sbjct: 845 DSRDRSRD----RSRSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRDRDYKSSKYKKSS 900
Query: 233 MAPAERVKAKMKLQLSETAARDS 255
+ R K++ +L A S
Sbjct: 901 RGTSGRKNNKIQSKLDSQATHIS 923
Score = 70.9 bits (172), Expect = 6e-11
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 24/180 (13%)
Query: 43 SSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKT 102
SS+ S+ ++ + + AS S+ + S ++ +++ S+ +++ + ++ S S+ T
Sbjct: 637 SSISSNGAYNRELISASGSALSKPPSPSSDKENNSTSKSNKSKSRQSSRASSLSESSDST 696
Query: 103 NR-----DYSSR-DSDRR---KRRSRS------RSRERYRDRDSRRRSRSRERNSRYSDR 147
+ ++SSR +SDR+ K++S S R RER RDRD RS +NSR +
Sbjct: 697 SHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSKRDRERERDRD---RSNKTYKNSRSRNV 753
Query: 148 DRDRDRDSGRSRSRSDSDVDRGRDR---RKRERGREKGRRRSRSVSPRKQR-RSEVKSSD 203
RDR+R+ R R D DR R+R R RER R++ R RSR S ++R RS +S D
Sbjct: 754 SRDRERE--RDRHNRSRDRDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRD 811
>ref|XP_422823.1| PREDICTED: similar to BM-011 protein [Gallus gallus]
Length = 366
Score = 95.1 bits (235), Expect = 3e-18
Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 21/230 (9%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE---RYRDRDSRRRSRSRERN 141
+++ KKK S S ++ SR RK RSRSRSR+ R + RRR RS +
Sbjct: 50 RSRRKKKHRRRSSSSSSSDSRTYSRKKSGRKSRSRSRSRDVQSRSHSYEKRRRHRSSSSS 109
Query: 142 SRYSDRDRDRDRDSGRSRS-RSDSDVDRGRDRRKRERGREKG---------RRRSRSVSP 191
S S R R R R GR +S RS + R RR R R R++ RR+ S S
Sbjct: 110 SYGSRRKRSRSRSRGRGKSYRSQRSRSKSRTRRSRSRPRQRSYSRSSERSSHRRTHSGSR 169
Query: 192 RKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETA 251
++RR + VKE+GKG E D + G +++ PAE+ KA+++L L E A
Sbjct: 170 ERERRKGREKDKVKEKGKGKEKETCSTKLGDAGNIKAGLEHLTPAEQAKARLQLVL-EAA 228
Query: 252 ARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVES 301
A+ + ER E ++ + ED A+LV+ + + A+ES
Sbjct: 229 AKADEALKAKERSE-------EEAKKRKEEDQATLVEQVKRVKEIEAIES 271
>ref|XP_636971.1| hypothetical protein DDB0187704 [Dictyostelium discoideum]
gi|60465378|gb|EAL63467.1| hypothetical protein
DDB0187704 [Dictyostelium discoideum]
Length = 1447
Score = 92.8 bits (229), Expect = 1e-17
Identities = 82/253 (32%), Positives = 115/253 (45%), Gaps = 45/253 (17%)
Query: 30 STSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSD-RKSQLQSI---- 84
S STS+ ++P +S +S + K+SS+STT T+ S S S L SI
Sbjct: 171 SISTSSTSIPTSSTSTSTSLKSSRELEKSSSTSTTPILQTSPSSTSSFLPSFLPSIGGGS 230
Query: 85 -QNKLKKKPTT-------ESRVSEKT-----------NRDYSSRDSDRRKRRSRSRSRER 125
+ + K P + + + K+ D RD DR + RSR R R+R
Sbjct: 231 NSDNINKSPPSGIIGIGADGKDKSKSGGGGGGGGGGGKDDKYMRDRDRSRDRSRDRIRDR 290
Query: 126 YRDRD-------SRRRSRSRERNSRYSDRDRDRDRDSGRSRSR---------SDSDVDRG 169
R RD R RSRSR+R+ Y DRDRDRDRD R R R S +DR
Sbjct: 291 DRSRDRIRDRVRDRSRSRSRDRDRYYRDRDRDRDRDRDRDRDRERDIGRSGGSSGGLDRD 350
Query: 170 RDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIH 228
RDR R R+R R + R RSRS R + R + D ++R + E + ++ G D KL
Sbjct: 351 RDRDRDRDRDRRRDRDRSRS---RDRSRDRSRDRD-RDRSRSRERDRDRDRGKDRNKLSS 406
Query: 229 GYDNMAPAERVKA 241
N + + +
Sbjct: 407 SSSNTSAVSNISS 419
Score = 90.1 bits (222), Expect = 1e-16
Identities = 77/222 (34%), Positives = 101/222 (44%), Gaps = 31/222 (13%)
Query: 30 STSTSNDAVPKPGSSLVSSSSF---LSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQN 86
S S S + P +S VS+SS S +K SSSS + SD D K + ++
Sbjct: 439 SESKSERSSPILSTSNVSTSSSSIPTSSLIKKSSSSI----GVSGKSDKDYKDRDYKDRD 494
Query: 87 KLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR------------- 133
+ + R ++ +RDY S D DR + R R R R+R RDRD R
Sbjct: 495 YKDRDYKEKDRDYKEKDRDYKSIDRDRDRDRDRDRDRDRDRDRDRDRDRDYKDYKDYKDY 554
Query: 134 --------RSRSRERNSRYSDRDRDRDRDSGRSRSRS-DSDVDRGRDR-RKRERGREKGR 183
R R R+R+ R DRDRDRDRD R R R + D DR RDR R RE+ REK R
Sbjct: 555 KLSEKDKERDRDRDRD-RDRDRDRDRDRDRDRDRDRDRERDRDRDRDRDRDREKDREKER 613
Query: 184 RRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAK 225
+ R K++ E KE+ K + K K D K
Sbjct: 614 DKERDKDKDKEKEKEKDKDRDKEKEKEKDKEKEKEKDKDKDK 655
Score = 87.4 bits (215), Expect = 6e-16
Identities = 76/238 (31%), Positives = 106/238 (43%), Gaps = 57/238 (23%)
Query: 30 STSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQN--- 86
S+S+SN +S VS+ S S + + S++ ++ T++ S S+R S + S N
Sbjct: 405 SSSSSN-------TSAVSNISSSSSSINSGSNTKNLSSPTSSESKSERSSPILSTSNVST 457
Query: 87 --------KLKKKPTTESRVSEKTNRDYSSRDSDRR---------------------KRR 117
L KK ++ VS K+++DY RD R K
Sbjct: 458 SSSSIPTSSLIKKSSSSIGVSGKSDKDYKDRDYKDRDYKDRDYKEKDRDYKEKDRDYKSI 517
Query: 118 SRSRSRERYRDRD-SRRRSRSRERNSRYSD---------------RDRDRDRDSGRSRSR 161
R R R+R RDRD R R R R+R+ Y D RDRDRDRD R R R
Sbjct: 518 DRDRDRDRDRDRDRDRDRDRDRDRDRDYKDYKDYKDYKLSEKDKERDRDRDRDRDRDRDR 577
Query: 162 S-DSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGK 217
D D DR RDR R+R+R R++ R R R K+R E KE+ K + + K
Sbjct: 578 DRDRDRDRDRDRDRERDRDRDRDRDRDREKDREKERDKERDKDKDKEKEKEKDKDRDK 635
Score = 76.6 bits (187), Expect = 1e-12
Identities = 74/243 (30%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 20 AAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKA-SSSSTTTTASTTAPSD---- 74
+ K S+S P +S S+SSFL F+ + S + + + PS
Sbjct: 187 STSLKSSRELEKSSSTSTTPILQTSPSSTSSFLPSFLPSIGGGSNSDNINKSPPSGIIGI 246
Query: 75 -SDRKSQLQS----------------IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRR 117
+D K + +S ++++ + + + R+ ++ RD R + R
Sbjct: 247 GADGKDKSKSGGGGGGGGGGGKDDKYMRDRDRSRDRSRDRIRDRDRSRDRIRDRVRDRSR 306
Query: 118 SRSRSRERY-----RDRD-SRRRSRSRERN-----------SRYSDRDRDRDRDSGRSRS 160
SRSR R+RY RDRD R R R RER+ R DRDRDRDRD R R
Sbjct: 307 SRSRDRDRYYRDRDRDRDRDRDRDRDRERDIGRSGGSSGGLDRDRDRDRDRDRDRRRDRD 366
Query: 161 RS---DSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKE-RGKGSEMRK 215
RS D DR RDR R R R RE+ R R R K S +S V S +
Sbjct: 367 RSRSRDRSRDRSRDRDRDRSRSRERDRDRDRGKDRNKLSSSSSNTSAVSNISSSSSSINS 426
Query: 216 GKN 218
G N
Sbjct: 427 GSN 429
Score = 75.5 bits (184), Expect = 2e-12
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D DR +++ + + K +DY + D+ + R R R R+R RDRD R
Sbjct: 522 DRDRDRDRDRDRDRDRDRDRDRDYKDYKDYKDYKLSEKDKERDRDRDRDRDRDRDRD-RD 580
Query: 134 RSRSRERN-SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-RERGREKGRRRSRSVSP 191
R R R+R+ R DRDRDRDRD R + R + + D+ RD+ K +E+ +EK + R +
Sbjct: 581 RDRDRDRDRDRERDRDRDRDRDRDREKDR-EKERDKERDKDKDKEKEKEKDKDRDKEKEK 639
Query: 192 RKQRRSEVKSSDVKERGKGSEMRKGKNV 219
K + E + K++ K E K KN+
Sbjct: 640 EKDKEKEKE----KDKDKDKEKDKPKNI 663
Score = 66.6 bits (161), Expect = 1e-09
Identities = 45/141 (31%), Positives = 70/141 (48%), Gaps = 7/141 (4%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D D K KL +K R ++ RD DR + R R R RER RDRD R
Sbjct: 542 DRDYKDYKDYKDYKLSEKDKERDRDRDRDRDRDRDRDRDRDRDRDRDRDRERDRDRD-RD 600
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK 193
R R RE++ R +RD++RD+D + + + + D DR +++ K E+ +EK + + + K
Sbjct: 601 RDRDREKD-REKERDKERDKDKDKEKEK-EKDKDRDKEKEK-EKDKEKEKEKDKDKDKEK 657
Query: 194 QRRSEV---KSSDVKERGKGS 211
+ + SS + GK S
Sbjct: 658 DKPKNIISKSSSSLSSGGKVS 678
Score = 64.3 bits (155), Expect = 6e-09
Identities = 61/164 (37%), Positives = 78/164 (47%), Gaps = 29/164 (17%)
Query: 39 PKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRV 98
P P SS SSS+ FV + + +T++ S S + LKK E+
Sbjct: 37 PPPTSSSSSSSNSPQTFVSQQHALNRSKDNTSSFQISS-----SSFSSSLKKDQLKENNK 91
Query: 99 SEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS 158
S T+ SSRDS R RSR+R RDR SR R R DR RDR RD R
Sbjct: 92 SNITSLS-SSRDS-------RDRSRDRSRDR-----SRDRAR-----DRSRDRARDRSRD 133
Query: 159 RSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSS 202
RSR DR RDR+ R++ R+ G+ S S+ P K S +SS
Sbjct: 134 RSR-----DRSRDRKDRDKFRD-GKSSSSSLKPLKSPLSTSQSS 171
Score = 50.1 bits (118), Expect = 1e-04
Identities = 30/116 (25%), Positives = 62/116 (52%), Gaps = 13/116 (11%)
Query: 109 RDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDR 168
RD DR + R R R R+R R++D R + R +ER D+D+D++++ + + R D + ++
Sbjct: 587 RDRDRERDRDRDRDRDRDREKD-REKERDKER-----DKDKDKEKEKEKDKDR-DKEKEK 639
Query: 169 GRDRRK-RERGREKGRRRSRSVSPRKQRRSEVK-----SSDVKERGKGSEMRKGKN 218
+D+ K +E+ ++K + + + + + S + SS + S ++K N
Sbjct: 640 EKDKEKEKEKDKDKDKEKDKPKNIISKSSSSLSSGGKVSSSISSTTTNSNLKKNVN 695
Score = 43.9 bits (102), Expect = 0.008
Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 55/348 (15%)
Query: 40 KPGSSLVSSSSFLSQFVKASSS--STTTTASTTAPSDSDRKSQLQSIQNK-----LKK-- 90
KP + + SSS LS K SSS STTT ++ +S K + S ++K +KK
Sbjct: 659 KPKNIISKSSSSLSSGGKVSSSISSTTTNSNLKKNVNSSNKDSIGSNKDKDITTTIKKII 718
Query: 91 -KPTTESRVSEK---TNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRS----RERNS 142
K ++ S S K N + ++ +++++K ++ E D DS S + +
Sbjct: 719 PKKSSASLSSSKINNNNNNNNNNNNNKKKTKTVDYDSEDSEDSDSYSYDESDSYWDDESD 778
Query: 143 RYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEV--- 199
Y+ + SG ++D D + K R R + K+ +S++
Sbjct: 779 EYTSGETGSTSGSGSDEEEIETDDTNTDDNASSSNEKPKPTGRGRPLGSTKKSKSKIHQP 838
Query: 200 -----KSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARD 254
K+S K+ S + K+ A K K ++ A+
Sbjct: 839 VAKISKASQAKQPPPPSS--RSKSSAAAAAAANSSTTTTTTTTSAPTKPKSAITPPVAKK 896
Query: 255 SDRGVGWERFEFNKDAP---LDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAAH 311
+ + + K A L+ E+ E E + ++ + + K +D+I
Sbjct: 897 LTKAQAEKEKQAAKQAEKERLEKEKQEKLEKEKEKLEKL--------EKEKSKDKI---- 944
Query: 312 DEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLSETVLARP 359
P P PT T R N K+ +KK++V S + + V++ P
Sbjct: 945 ------PPEPMVPTKKT-----RSNGKK--DKKEIVQSTVEDVVMSEP 979
Score = 40.4 bits (93), Expect = 0.087
Identities = 38/128 (29%), Positives = 64/128 (49%), Gaps = 14/128 (10%)
Query: 92 PTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDR 151
PT+ S S + + + S+ + + +RS++ + S + S S +S D+ ++
Sbjct: 39 PTSSSSSSSNSPQTFVSQ------QHALNRSKD---NTSSFQISSSSFSSSLKKDQLKEN 89
Query: 152 DRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRS-VSPRKQRRSEVKSSDVKERGKG 210
++ + S S S DR RD R R+R R++ R RSR R + RS +S D K+R K
Sbjct: 90 NKSNITSLSSSRDSRDRSRD-RSRDRSRDRARDRSRDRARDRSRDRSRDRSRDRKDRDK- 147
Query: 211 SEMRKGKN 218
R GK+
Sbjct: 148 --FRDGKS 153
Score = 38.9 bits (89), Expect = 0.25
Identities = 49/228 (21%), Positives = 87/228 (37%), Gaps = 30/228 (13%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
DR +++ +++ SR S +RD SRD DR + RSR R R+R R +D + S
Sbjct: 348 DRDRDRDRDRDRDRRRDRDRSR-SRDRSRD-RSRDRDRDRSRSRERDRDRDRGKDRNKLS 405
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRER----------------GR 179
S S S+ + S +++ S + +R
Sbjct: 406 SSSSNTSAVSNISSSSSSINSGSNTKNLSSPTSSESKSERSSPILSTSNVSTSSSSIPTS 465
Query: 180 EKGRRRSRSV-----SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMA 234
++ S S+ S + + + K D K+R + R K DY + D
Sbjct: 466 SLIKKSSSSIGVSGKSDKDYKDRDYKDRDYKDRDYKEKDRDYKEKDRDYKSIDRDRDRDR 525
Query: 235 PAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAED 282
+R + + + RD DR ++ ++ KD L +++ E D
Sbjct: 526 DRDRDRDRDR-------DRDRDRDRDYKDYKDYKDYKLSEKDKERDRD 566
>emb|CAA52503.1| early protein [Human papillomavirus type 14D]
gi|9627274|ref|NP_041755.1| early protein [Human
papillomavirus type 14] gi|549238|sp|P36783|VE2_HPV14
Regulatory protein E2 gi|480138|pir||S36470 E2 protein -
human papillomavirus type 14D
Length = 483
Score = 91.3 bits (225), Expect = 4e-17
Identities = 73/210 (34%), Positives = 99/210 (46%), Gaps = 22/210 (10%)
Query: 9 YYDELTR---KGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTT 65
+ D+ TR G K + F+ TS+ PG S++S S + TT
Sbjct: 172 FADDATRYSKTGHWEVKVNKETVFTPVTSSTPPESPGGQADSNTS--------SKTPTTA 223
Query: 66 TASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER 125
T ST+ S +D + Q Q K ++ R S +T R +R R + +SRSRSR R
Sbjct: 224 TDSTSRLSPADSRKQSQQANTKGRRYGR---RPSSRTRRTTETRQRRRSRSKSRSRSRSR 280
Query: 126 YRDRDSRRRSRSRERNSRYSDRDRDRDRD------SGRSRSRSDSDVDRGRDRRKRERGR 179
R R SR RS+S ER SRY R R R ++ + R R R S R +R R RGR
Sbjct: 281 SRLR-SRSRSQSSERRSRYRSRSRSRQKEVSRITTTTRGRGRGSSSTSSKRSQRARGRGR 339
Query: 180 EKGR-RRSRSVSPRKQRRSEVKSSDVKERG 208
R RRS S SP +RS +S ++RG
Sbjct: 340 GGSRGRRSSSTSPTSSKRSRRESESSRQRG 369
Score = 56.2 bits (134), Expect = 2e-06
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 56 VKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRK 115
VK + + T +++ P +S Q+ N K PTT ++ T+R S DS ++
Sbjct: 187 VKVNKETVFTPVTSSTPPESPGG---QADSNTSSKTPTT---ATDSTSR-LSPADSRKQS 239
Query: 116 RRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS--RSRSDSDVDRGRDR- 172
+++ ++ R RY R S R R+ E R R + R R RS RSRS S R R
Sbjct: 240 QQANTKGR-RYGRRPSSRTRRTTETRQRRRSRSKSRSRSRSRSRLRSRSRSQSSERRSRY 298
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
R R R R+K R + + + R S SS +R +G
Sbjct: 299 RSRSRSRQKEVSRITTTTRGRGRGSSSTSSKRSQRARG 336
>gb|AAH81213.1| MGC84816 protein [Xenopus laevis]
Length = 320
Score = 90.5 bits (223), Expect = 7e-17
Identities = 78/271 (28%), Positives = 124/271 (44%), Gaps = 26/271 (9%)
Query: 79 SQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSR 138
S+ ++ K KK S S R YS + S ++SRSRSRE + +RR
Sbjct: 8 SEEETRSRKKKKHRKRSSSSSSSDGRTYSRKKS---AKKSRSRSREVHSHSYEKRRRHRS 64
Query: 139 ERNSRYSDRDR---DRDRDSGRSRSRSDSDVDRGRDR---RKRERGREKG-RRRSRSVSP 191
NS YS R + R RD GR+R S R R R R R R E+ RRRSRS S
Sbjct: 65 SSNSSYSSRRKRSCSRSRDRGRTRKYHKSRTSRSRSRHRQRSRSRSSERSSRRRSRSRSY 124
Query: 192 RKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETA 251
++R + S ++E+ +G + R+ + D + G +++ PAE+ KA++++ L A
Sbjct: 125 DRERGKGKEKSKMREKERGKQ-RESTSKPSDLVNIKAGLEHLPPAEQAKARLQMVLQAAA 183
Query: 252 -------ARDSDRGVGWERFEFNKDAPLD----DEEVEGAEDDASLVKHIGQSFRFSAVE 300
A++ +R E ++ LD ++E+E E D+ + Q FR S
Sbjct: 184 KADEALRAKEKSEEEARKRKEEDQSLLLDQAKREKEIEAIESDS----FVPQMFRSSRDT 239
Query: 301 SKREDQIQAAHDEAMFGAPAPPPPTSSTDSE 331
+ + H+ A+ G P + +SE
Sbjct: 240 KGSTESSETKHESAILGTGTIDPFDEAKESE 270
>emb|CAE59627.1| Hypothetical protein CBG03040 [Caenorhabditis briggsae]
Length = 446
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 8/145 (5%)
Query: 72 PSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
P D DR+ +S + ++ P+ R + +RD RD DRR+ R R R R+R R RD
Sbjct: 267 PDDRDRR---RSRSPRRRRSPSPRRR-RDSRDRD-RDRDRDRRRSRDRDRDRKRSRSRDR 321
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVS 190
+RRSRSR+++ DRDR R R R R R DR R+R R R R R++ ++RSRS S
Sbjct: 322 KRRSRSRDKDRENKDRDRKRSR--SRDRRRRSKSRDRKRERSRSRSRDRKREKKRSRSRS 379
Query: 191 PRKQRRSEVKSSDVKERGKGSEMRK 215
++R E + +D KE S +R+
Sbjct: 380 TDRKREKEDRKTDKKENENESALRE 404
Score = 72.0 bits (175), Expect = 3e-11
Identities = 67/209 (32%), Positives = 84/209 (40%), Gaps = 19/209 (9%)
Query: 79 SQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS--RSRSRERYRDRDSRRRSR 136
S++ I+ + K V E + D DRR+ RS R RS R RDSR R R
Sbjct: 238 SRVAIIKPQAKTDEQALGEVEEAIRLGRNPDDRDRRRSRSPRRRRSPSPRRRRDSRDRDR 297
Query: 137 SRERNSRYSDRDRDRDRDSGRSRSRS--------DSDVDRGRDRRKRERGREKGRRRSRS 188
R+R DR R RDRD R RSRS D DR R R+R R + RRR
Sbjct: 298 DRDR-----DRRRSRDRDRDRKRSRSRDRKRRSRSRDKDRENKDRDRKRSRSRDRRRRSK 352
Query: 189 VSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLS 248
RK+ RS +S D K K S R + +N E A + L
Sbjct: 353 SRDRKRERSRSRSRDRKREKKRSRSRSTDRKREKEDRKTDKKEN----ENESALREKLLE 408
Query: 249 ETAARDSDRGVGWERFEFNKDAPLDDEEV 277
+ AAR WE + + EEV
Sbjct: 409 KKAARKDSSEDEWEEKPVIANGEVKKEEV 437
Score = 43.1 bits (100), Expect = 0.013
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K S S S + D + K + + ++ ++SR ++ SRD R K+
Sbjct: 314 KRSRSRDRKRRSRSRDKDRENKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSRDRKREKK 373
Query: 117 RSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSD 163
RSRSRS +R R+++ R+ + +E + + R++ ++ + R S D
Sbjct: 374 RSRSRSTDRKREKEDRKTDK-KENENESALREKLLEKKAARKDSSED 419
>emb|CAA85414.2| Hypothetical protein D2089.1a [Caenorhabditis elegans]
gi|20338917|emb|CAA90135.2| Hypothetical protein
D2089.1a [Caenorhabditis elegans]
gi|56749455|sp|O01159|RSP7_CAEEL Probable splicing
factor, arginine/serine-rich 7 (p54)
gi|25153309|ref|NP_741039.1| serine/aRginine rich
pre-mRNA SPlicing factor (52.7 kD) (rsp-7)
[Caenorhabditis elegans]
Length = 452
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/135 (42%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 90 KKPTTESRVSEKTNRDYSSRDSDR-------RKRRSRSRSRERYRDRDSRRRSRSRERNS 142
+ P S + RD RD DR R RRSRSR R+R RDR R RSR R+R S
Sbjct: 276 RSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDR-KRSRSRDRKRRS 334
Query: 143 RYSD-RDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSEVK 200
R D +DRDR R R R R DR R+R R R + R++ ++RSRS SP K+R E +
Sbjct: 335 RSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEKRRDKEDR 394
Query: 201 SSDVKERGKGSEMRK 215
++ KE S +R+
Sbjct: 395 KTEKKENENESSLRE 409
Score = 81.6 bits (200), Expect = 3e-14
Identities = 63/179 (35%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 103 NRDYSSRDSDRRKR----RSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS 158
+RD S RR+R R R SR+R RDRD RR RSR+R SR DRDRDRDR RS
Sbjct: 269 DRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRR-RSRDRRSRSRDRDRDRDRKRSRS 327
Query: 159 RSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
R R R R R+R R + RRR RK+ RS +S D K K S R +
Sbjct: 328 RDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRKRERSRSRSKDRKRDKKRSRSRSPEK 387
Query: 219 VGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEV 277
+ +N E + + L + AAR WE + + +EE+
Sbjct: 388 RRDKEDRKTEKKEN----ENESSLREKLLEKKAARKDSSDDEWEEKPTPTNGEVKNEEI 442
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/153 (37%), Positives = 79/153 (50%), Gaps = 11/153 (7%)
Query: 72 PSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
P + L I+ ++ + R + +R R S +RR SR R+R RDRD
Sbjct: 245 PQAKTDEQALGEIEEAIRMGRNGDDR-DRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDR 303
Query: 132 RR----RSRSRERNSRYSDRDRDRDRD-SGRSRSRSDSDVD----RGRDRRKRERGREKG 182
RR RSRSR+R+ R DR R R RD RSRSR + D D R RDRR+R + R++
Sbjct: 304 RRSRDRRSRSRDRD-RDRDRKRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRRRSKSRDRK 362
Query: 183 RRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRK 215
R RSRS S ++R + S E+ + E RK
Sbjct: 363 RERSRSRSKDRKRDKKRSRSRSPEKRRDKEDRK 395
Score = 60.5 bits (145), Expect = 8e-08
Identities = 46/144 (31%), Positives = 74/144 (50%), Gaps = 21/144 (14%)
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDR-------RKRRSRSRS- 122
+PS R+ +++ + + + R S +RD RD DR RKRRSRSR
Sbjct: 283 SPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRD---RDRDRKRSRSRDRKRRSRSRDN 339
Query: 123 ----RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERG 178
R+R R RD RRRS+SR+R R R R +DR + RSRS R ++R+ +
Sbjct: 340 KDRDRKRSRSRDRRRRSKSRDRK-RERSRSRSKDRKRDKKRSRS-----RSPEKRRDKED 393
Query: 179 REKGRRRSRSVSPRKQRRSEVKSS 202
R+ ++ + + S +++ E K++
Sbjct: 394 RKTEKKENENESSLREKLLEKKAA 417
Score = 45.4 bits (106), Expect = 0.003
Identities = 40/136 (29%), Positives = 64/136 (46%), Gaps = 20/136 (14%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
DRK + +S NK + + + SR D R R ++R RSRSR + R RD ++RS
Sbjct: 329 DRKRRSRSRDNKDRDRKRSRSR-------DRRRRSKSRDRKRERSRSRSKDRKRD-KKRS 380
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQR 195
RSR R RD++ DR + + + ++S + RE+ EK R S +
Sbjct: 381 RSRSPEKR---RDKE-DRKTEKKENENESSL--------REKLLEKKAARKDSSDDEWEE 428
Query: 196 RSEVKSSDVKERGKGS 211
+ + +VK G+
Sbjct: 429 KPTPTNGEVKNEEIGN 444
>ref|XP_330498.1| hypothetical protein [Neurospora crassa] gi|28925614|gb|EAA34634.1|
hypothetical protein [Neurospora crassa]
Length = 901
Score = 88.6 bits (218), Expect = 3e-16
Identities = 68/203 (33%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDY---SSRDSDR 113
++S+ S + + P ++DR+ + + +K ES +S++ + D S RD DR
Sbjct: 635 RSSARSVRSRSPEHDPYEADRRKAIAERERNFRKSSMAESLLSDRRSVDGHHDSIRDRDR 694
Query: 114 RKRRSRSRSRERYRDRDSRRRSRSRERN-SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR 172
+ R R R R YRDRD R R R R+R+ R DRDRDRDRD R R R DR RD
Sbjct: 695 DRDRERDRDRRDYRDRD-RERERDRDRDRDRERDRDRDRDRDRERDRERDRDHRDRDRD- 752
Query: 173 RKRERGREKGR-------------RRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNV 219
R+R+R R+ R RRSR + R V DV E G E
Sbjct: 753 RERDRDRDYDRRPRHDELNHYDRERRSRDEDRERIYRRRVMDRDVDELPYGDERPSSSRR 812
Query: 220 GVDYAKLIHGYDNMAPAERVKAK 242
+D PA+RVK +
Sbjct: 813 TRPEEDEHDRHDGRPPAKRVKTE 835
Score = 58.2 bits (139), Expect = 4e-07
Identities = 81/314 (25%), Positives = 114/314 (35%), Gaps = 70/314 (22%)
Query: 73 SDSDRKSQLQSIQNKLKKKPTTESRVSEKT--------NRDYSSRDSDRRKRRSRSRSRE 124
SD R+S + +LK+K R + +R S S R RSRS +
Sbjct: 590 SDEARRSAFEKHIRRLKEKEEEAERDRLRRRDRGDLYRDRGERSHRSSARSVRSRSPEHD 649
Query: 125 RYRDRDSRRRSRSRERNSRYSD-------------------RDRDRDRDSGRSRSRSDSD 165
Y + D R+ RERN R S RDRDRDRD R R R
Sbjct: 650 PY-EADRRKAIAERERNFRKSSMAESLLSDRRSVDGHHDSIRDRDRDRDRERDRDR---- 704
Query: 166 VDRGRDRRKRERGREKGRRRSRSVS-------PRKQRRSEVKSSDVKERGKGSEMRKGKN 218
RD R R+R RE+ R R R R + R + D ++R + E + +
Sbjct: 705 ----RDYRDRDRERERDRDRDRDRERDRDRDRDRDRERDRERDRDHRDRDRDRERDRDR- 759
Query: 219 VGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDA---PLDDE 275
DY + +D + +R E +RD DR + R ++D P DE
Sbjct: 760 ---DYDRRPR-HDELNHYDR----------ERRSRDEDRERIYRRRVMDRDVDELPYGDE 805
Query: 276 EVEGA-----EDDASLVKHIGQSFRFSAVESKREDQIQAAHDEAMFGAPAPPPPTSSTDS 330
+ E+D +H R A K E A + APA P +
Sbjct: 806 RPSSSRRTRPEED----EHDRHDGRPPAKRVKTEPSTTATPAAGVPAAPATAPAVKDEAT 861
Query: 331 EPERENEKEVDNKK 344
P R+ K +K
Sbjct: 862 SPARDGVKSPQPQK 875
Score = 43.5 bits (101), Expect = 0.010
Identities = 42/178 (23%), Positives = 77/178 (42%), Gaps = 14/178 (7%)
Query: 55 FVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKK--KPTTESRVSEKT------NRDY 106
F + +A S+ ++ L +++ LK+ P T + E+ + ++
Sbjct: 526 FERLQEKKAKRSADDDKHSERQQRRALDDLRSYLKRLEPPITVNETYEQVEGRIAQSNEF 585
Query: 107 SSRDSDRRKRRSRSRSRERYRDRDS---RRRSRSRERNSRYSDRDRDRDRDSGRS-RSRS 162
+ SD +R + + R ++++ R R R R+R Y DR R S RS RSRS
Sbjct: 586 KAVASDEARRSAFEKHIRRLKEKEEEAERDRLRRRDRGDLYRDRGERSHRSSARSVRSRS 645
Query: 163 DSDVDRGRDRRKRERGREKG-RRRSRSVSPRKQRRS-EVKSSDVKERGKGSEMRKGKN 218
DRRK RE+ R+ S + S RRS + +++R + + + ++
Sbjct: 646 PEHDPYEADRRKAIAERERNFRKSSMAESLLSDRRSVDGHHDSIRDRDRDRDRERDRD 703
Score = 41.2 bits (95), Expect = 0.051
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 124 ERYR-DRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRR 173
+ YR DRD R R R+R+ Y DRDRDRDRD R D G R+
Sbjct: 123 DNYRPDRDRDRDYRDRDRDRDYRDRDRDRDRDHRDHRDHRDYREPLGESRQ 173
Score = 35.0 bits (79), Expect = 3.6
Identities = 19/36 (52%), Positives = 20/36 (54%), Gaps = 1/36 (2%)
Query: 146 DRDRDRD-RDSGRSRSRSDSDVDRGRDRRKRERGRE 180
DRDRDRD RD R R D D DR RD R R+
Sbjct: 128 DRDRDRDYRDRDRDRDYRDRDRDRDRDHRDHRDHRD 163
Score = 34.3 bits (77), Expect = 6.2
Identities = 24/56 (42%), Positives = 27/56 (47%), Gaps = 2/56 (3%)
Query: 106 YSSRDSDR-RKRRSRSRS-RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSR 159
Y SD R R R R R+R RDRD R R R R+R+ R RD G SR
Sbjct: 117 YGGGQSDNYRPDRDRDRDYRDRDRDRDYRDRDRDRDRDHRDHRDHRDYREPLGESR 172
>ref|NP_001016318.1| hypothetical protein LOC549072 [Xenopus tropicalis]
Length = 320
Score = 88.6 bits (218), Expect = 3e-16
Identities = 75/259 (28%), Positives = 123/259 (46%), Gaps = 23/259 (8%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERY-RDRDSRRRS 135
R S +N+ +KK R S ++ D + + ++SRSRSRE Y D RRR
Sbjct: 3 RHSSDSEEENRSRKKKKHRKRSSSSSSSDGRTYSRKKSGKKSRSRSREGYSHSYDKRRRH 62
Query: 136 RSRERNSRYSDRDRD--RDRDSGRSRSRSDSDVDRGRDR-RKRERGREK---GRRRSRSV 189
RS +S S R R R +D GR+R S R + R R+R R R RRRSRS
Sbjct: 63 RSSSESSYSSRRKRSSSRSKDRGRTRKYHKSRTSRSKSRHRQRTRSRSSDRSSRRRSRSK 122
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSE 249
S ++R S ++E+ +G ++++ + D + G +++ PAE+ KA++++ L
Sbjct: 123 SYDRERGKGKDKSKMREKERG-KVKESSSKPSDLVNIKAGLEHLPPAEQAKARLQMVLQA 181
Query: 250 TA-------ARDSDRGVGWERFEFNKDAPLDD----EEVEGAEDDASLVKHIGQSFRFSA 298
A A++ +R E ++ LD +E+E E D+ + Q+FR S
Sbjct: 182 AAKADEALRAKERSEEEARKRKEEDQSVLLDHVKRAKEIELIESDS----FVPQAFRSSR 237
Query: 299 VESKREDQIQAAHDEAMFG 317
+ I+ H+ A+ G
Sbjct: 238 DTKASTESIETKHESAILG 256
>gb|AAH76555.1| Unknown (protein for IMAGE:7044154) [Danio rerio]
Length = 813
Score = 87.8 bits (216), Expect = 5e-16
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 15/187 (8%)
Query: 33 TSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKP 92
TS + + G S S S +SSSS++ ++S+++ S S R S S + +++
Sbjct: 519 TSKEHTGRNGGSASPSPSERRSRTSSSSSSSSRSSSSSSSSASSRSSSRSSSPKRKRRRS 578
Query: 93 TTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRD 152
+ SR + + +R SSR R R++ RDR R+RS ER+SR+ R R
Sbjct: 579 RSASRGTRRRSRSRSSR--------RRQSERDKGRDRRRSSRTRSTERSSRHRKRSHSRQ 630
Query: 153 RDSGRS-RSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSD-VKERGKG 210
R S RS RSRS +G R RER R + RRRSRS S ++++ + + D KER +
Sbjct: 631 RRSSRSHRSRS-----KGSRSRSRERRRSRDRRRSRSTSRNRRKQKDSRDRDRKKERSRS 685
Query: 211 SEMRKGK 217
E K K
Sbjct: 686 HEKEKKK 692
Score = 82.0 bits (201), Expect = 3e-14
Identities = 61/198 (30%), Positives = 102/198 (50%), Gaps = 19/198 (9%)
Query: 24 KQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQS 83
K+ G + +++ + + S SSSS S+ +SSSS ++ +S+ + S ++ + +S
Sbjct: 521 KEHTGRNGGSASPSPSERRSRTSSSSSSSSRSSSSSSSSASSRSSSRSSSPKRKRRRSRS 580
Query: 84 IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRK--------RRSRSRSRERYRDRDSRRRS 135
+++ + S ++ RD + DRR+ R SR R R R R S R
Sbjct: 581 ASRGTRRRSRSRSSRRRQSERD---KGRDRRRSSRTRSTERSSRHRKRSHSRQRRSSRSH 637
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQR 195
RSR + SR R+R R RD RSRS S R+RRK++ R++ R++ RS S K++
Sbjct: 638 RSRSKGSRSRSRERRRSRDRRRSRSTS-------RNRRKQKDSRDRDRKKERSRSHEKEK 690
Query: 196 RSEVKSSD-VKERGKGSE 212
+ + K D K++ KG E
Sbjct: 691 KKKEKELDKKKDKQKGKE 708
Score = 58.9 bits (141), Expect = 2e-07
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 30 STSTSNDAVPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQ--NK 87
S S+S + PK S+S ++ S SS + D R S+ +S + ++
Sbjct: 562 SRSSSRSSSPKRKRRRSRSASRGTRRRSRSRSSRRRQSERDKGRDRRRSSRTRSTERSSR 621
Query: 88 LKKKPTTESRVSEKTNRDYSS----------RDSDRRKRRSRSRSRERY---RDRD---S 131
+K+ + R S +++R S R DRR+ RS SR+R + RDRD
Sbjct: 622 HRKRSHSRQRRSSRSHRSRSKGSRSRSRERRRSRDRRRSRSTSRNRRKQKDSRDRDRKKE 681
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDV----DRGRDRRKRERGREKGRRRSR 187
R RS +E+ + + D+ +D+ G+ + S V D G+ RRK+E EK +
Sbjct: 682 RSRSHEKEKKKKEKELDKKKDKQKGKEKEIEGSSVRDEEDYGKSRRKKE--SEKTDSHND 739
Query: 188 SVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAK 225
S + + S+ S+ ++ SE + ++ + +K
Sbjct: 740 KYSRQDSKSSKKGSTKASKKYSDSESSRSRSPSPEVSK 777
Score = 47.4 bits (111), Expect = 7e-04
Identities = 42/160 (26%), Positives = 69/160 (42%), Gaps = 22/160 (13%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTE-------SRVSEKTNRDYSSR 109
+ S S++ D DRK + K KKK E + EK S R
Sbjct: 658 RRSRSTSRNRRKQKDSRDRDRKKERSRSHEKEKKKKEKELDKKKDKQKGKEKEIEGSSVR 717
Query: 110 DSD---RRKRRSRSRSRERYRDRDSRRRSRSRERNS-----RYSDRDRDRDRDSGRSRSR 161
D + + +R+ S + + D+ SR+ S+S ++ S +YSD + S RSRS
Sbjct: 718 DEEDYGKSRRKKESEKTDSHNDKYSRQDSKSSKKGSTKASKKYSDSE------SSRSRSP 771
Query: 162 SDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKS 201
S +V + + +K +R R + RS + R+ + KS
Sbjct: 772 S-PEVSKEKKSKKSKRSRSRSTERSHKSGKKASRKHKSKS 810
Score = 44.7 bits (104), Expect = 0.005
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 14/150 (9%)
Query: 80 QLQSIQNKLKKKPTTESRVS---EKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSR 136
++Q++++ L + R E+T+ + +R + R R R S +
Sbjct: 460 EMQTVKDDLASDRVSRERTGYEDEQTDSKHKQEVREREAEPTVERRRSRSEPEVSEVKRT 519
Query: 137 SRERNSRYSD---------RDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
S+E R R R S SRS S S R ++ RRRSR
Sbjct: 520 SKEHTGRNGGSASPSPSERRSRTSSSSSSSSRSSSSSSSSASSRSSSRSSSPKRKRRRSR 579
Query: 188 SVSPRKQRRSEVKSSDVK--ERGKGSEMRK 215
S S +RRS +SS + ER KG + R+
Sbjct: 580 SASRGTRRRSRSRSSRRRQSERDKGRDRRR 609
Score = 42.4 bits (98), Expect = 0.023
Identities = 26/88 (29%), Positives = 45/88 (50%)
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRR 134
S RK + + + K +S+ S+K + S + SD RSRS S E +++ S++
Sbjct: 725 SRRKKESEKTDSHNDKYSRQDSKSSKKGSTKASKKYSDSESSRSRSPSPEVSKEKKSKKS 784
Query: 135 SRSRERNSRYSDRDRDRDRDSGRSRSRS 162
RSR R++ S + + +S+SRS
Sbjct: 785 KRSRSRSTERSHKSGKKASRKHKSKSRS 812
Score = 41.6 bits (96), Expect = 0.039
Identities = 37/143 (25%), Positives = 62/143 (42%), Gaps = 19/143 (13%)
Query: 85 QNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERY------------RDRDSR 132
+ +K ++++ E +R +D+ RRK R + + +ER DR SR
Sbjct: 416 ERSVKGSDSSDTDDEELLHRIRQKQDAFRRKEREQQQLQERLALEMQTVKDDLASDRVSR 475
Query: 133 RRS--RSRERNSRYSDRDRDRDRDS--GRSRSRSDSDVDRGRDRRKRERGREKGRRRSRS 188
R+ + +S++ R+R+ + R RSRS+ +V + K GR G S S
Sbjct: 476 ERTGYEDEQTDSKHKQEVREREAEPTVERRRSRSEPEVSEVKRTSKEHTGRNGG---SAS 532
Query: 189 VSPRKQRRSEVKSSDVKERGKGS 211
SP ++R SS R S
Sbjct: 533 PSPSERRSRTSSSSSSSSRSSSS 555
Score = 37.7 bits (86), Expect = 0.56
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 77 RKSQLQSIQNKLKKKPTT--ESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD-SRR 133
++ + Q +Q +L + T + S++ +R+ + + ++ + + RER + RR
Sbjct: 446 KEREQQQLQERLALEMQTVKDDLASDRVSRERTGYEDEQTDSKHKQEVREREAEPTVERR 505
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRS--------RSRSDSDVDRGRDRRKRERGREKGRRR 185
RSRS S ++ +G S RSR+ S R
Sbjct: 506 RSRSEPEVSEVKRTSKEHTGRNGGSASPSPSERRSRTSSSSSSSSRSSSSSSSSASSRSS 565
Query: 186 SRSVSPRKQRR---SEVKSSDVKERGKGSEMRKGK 217
SRS SP+++RR S + + + R + S R+ +
Sbjct: 566 SRSSSPKRKRRRSRSASRGTRRRSRSRSSRRRQSE 600
Score = 35.0 bits (79), Expect = 3.6
Identities = 29/125 (23%), Positives = 50/125 (39%), Gaps = 10/125 (8%)
Query: 105 DYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDS 164
+Y S +SD +R + D + R R ++ R +R++ + ++ ++
Sbjct: 406 EYGSDESDDEERSVKGSDSSDTDDEELLHRIRQKQDAFRRKEREQQQLQERLALEMQTVK 465
Query: 165 DVDRGRDRRKRER---------GREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRK 215
D D DR RER + K R R P +RR +V E + S+
Sbjct: 466 D-DLASDRVSRERTGYEDEQTDSKHKQEVREREAEPTVERRRSRSEPEVSEVKRTSKEHT 524
Query: 216 GKNVG 220
G+N G
Sbjct: 525 GRNGG 529
>gb|AAH45992.1| Similar to RIKEN cDNA 2610015J01 gene [Danio rerio]
gi|41054239|ref|NP_956084.1| hypothetical protein
LOC327336 [Danio rerio]
Length = 731
Score = 87.8 bits (216), Expect = 5e-16
Identities = 79/275 (28%), Positives = 128/275 (45%), Gaps = 17/275 (6%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSR 136
R+ + Q ++ + K++ R E+ +R+ R+ +R + R R R RER RDRD R R++
Sbjct: 282 REKERQELERERKERDKERERERERRDRE---REKERERERERERERERERDRD-RERTK 337
Query: 137 SRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQR 195
R+R+ + +RDR RDR GRSRSR S DR RD+ +KR+R ++ R RK R
Sbjct: 338 ERDRDRDW-ERDRSRDRSEGRSRSREQSR-DRERDKDKKRDREEDEEEAYERRKLERKLR 395
Query: 196 RSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDS 255
K + +ER K E+R+ K DY+K I + + K + E D
Sbjct: 396 E---KEAAYQERLKNWELRERKKAR-DYSKEIEREEERRREMAKEGKRLKEFLEDYDDDR 451
Query: 256 DRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRED---QIQAAHD 312
D + K ++E+E E D K + R + D +++ +
Sbjct: 452 DDPKYYRGSALQKRLRDREKEIELDERDRKREKEELEEIRQRLLAEGHPDPDAELRRMEE 511
Query: 313 EA--MFGAPAPPPPTSSTDSEPERENEKEVDNKKD 345
EA + P P P + +P RE E++ + +D
Sbjct: 512 EAERLRQPPVKPEPEEEREHKPSRE-ERDRERGRD 545
Score = 68.6 bits (166), Expect = 3e-10
Identities = 83/329 (25%), Positives = 132/329 (39%), Gaps = 38/329 (11%)
Query: 3 EEKAAAYYDELTRK--GEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASS 60
E+K D T+ E AK K ++DA + L + Q VK +
Sbjct: 154 EKKLLVKVDAKTKAQLDEWKAKKKSTSANGNGKADDAGEEEEEVLDEETKKRDQIVKGAI 213
Query: 61 SSTTTTAST--TAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRD-------- 110
S+ A S D S+ + + K K + + E RD SR+
Sbjct: 214 DGLIREYSSELNAQSQDDESSRRKKKREK-KDEDDINAMEMEDDKRDLISREINKFRDTH 272
Query: 111 ----SDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRS-DSD 165
++ KR + ER R + R R RER R +++R+R+R+ R R R D D
Sbjct: 273 KKLEEEKGKREKERQELERERKERDKERERERERRDREREKERERERERERERERERDRD 332
Query: 166 VDRGRDR-------RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRK-GK 217
+R ++R R R R R +GR RSR S ++R + K ++ + E RK +
Sbjct: 333 RERTKERDRDRDWERDRSRDRSEGRSRSREQSRDRERDKDKKRDREEDEEEAYERRKLER 392
Query: 218 NVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEV 277
+ A N ER KA+ S+ R+ +R R E K+ E +
Sbjct: 393 KLREKEAAYQERLKNWELRERKKAR---DYSKEIEREEER-----RREMAKEGKRLKEFL 444
Query: 278 EGAEDDASLVKHIGQSFRFSAVESKREDQ 306
E +DD K+ +R SA++ + D+
Sbjct: 445 EDYDDDRDDPKY----YRGSALQKRLRDR 469
>ref|NP_067062.1| RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 87.4 bits (215), Expect = 6e-16
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRDSRRRS 135
++ + Q I+ + +++ R E+ R+ R+ +R K + R R RER RDRD R +
Sbjct: 298 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD-RTKE 356
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQ 194
R R+R+ R DRDRDR+R S R++ RS S ++ RDR R+RER RE+ R R R ++
Sbjct: 357 RDRDRD-RERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERERERE 414
Query: 195 RRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPA--ERVK------AKMKLQ 246
R E + +E+ K + + + + KL A ER+K K +
Sbjct: 415 REREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE 474
Query: 247 LSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQ 306
+ A R+ +R R E K+A E +E +DD K+ +R SA++ + D+
Sbjct: 475 YEKEAEREEER-----RREMAKEAKRLKEFLEDYDDDRDDPKY----YRGSALQKRLRDR 525
Score = 84.7 bits (208), Expect = 4e-15
Identities = 80/287 (27%), Positives = 116/287 (39%), Gaps = 27/287 (9%)
Query: 84 IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERN-- 141
I ++ K T ++ E+ + R ++RR R R RER R+R R R R RER
Sbjct: 277 ISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERERERE 336
Query: 142 -----SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-------RERGREKGRRRSRSV 189
R +RDRDRDR R R R D + DR RDR + R R REK R R R
Sbjct: 337 KEKERERERERDRDRDRTKERDRDR-DRERDRDRDRERSSDRNKDRSRSREKSRDRERER 395
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSE 249
++R E + +ER + E + + D K D ER K + KL+ E
Sbjct: 396 EREREREREREREREREREREREREREREREKD-KKRDREEDEEDAYERRKLERKLREKE 454
Query: 250 TAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQA 309
A + +R WE E K + E E + K + F ED
Sbjct: 455 AAYQ--ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEF------LEDYDDD 506
Query: 310 AHDEAMFGAPAPPPPTSSTDSE---PERENEKEVDNKKDLVSSLLSE 353
D + A + E ER+ ++E + +++ LL+E
Sbjct: 507 RDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAE 553
Score = 79.0 bits (193), Expect = 2e-13
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
+R+ + + + + K+K R ++ RD DR + R R R RER DR ++ RS
Sbjct: 324 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDR-NKDRS 382
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSP--- 191
RSRE+ SR +R+R+R+R+ R R R + + +R R+R R+RER REK ++R R
Sbjct: 383 RSREK-SRDRERERERERERERERER-EREREREREREREREREREKDKKRDREEDEEDA 440
Query: 192 ----RKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQL 247
+ +R+ K + +ER K E+R+ K +Y K + +AK +
Sbjct: 441 YERRKLERKLREKEAAYQERLKNWEIRERKKTR-EYEKEAEREEERRREMAKEAKRLKEF 499
Query: 248 SETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRED-- 305
E D D + K ++E+E E D K + R + D
Sbjct: 500 LEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPD 559
Query: 306 -QIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKD 345
++Q EA P +SE E E ++E + K++
Sbjct: 560 AELQRMEQEA--ERRRQPQIKQEPESEEEEEEKQEKEEKRE 598
Score = 37.0 bits (84), Expect = 0.96
Identities = 33/177 (18%), Positives = 70/177 (38%), Gaps = 30/177 (16%)
Query: 60 SSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSR 119
SS S + DR+ + + + + +++ R E+ R+ ++ K+R R
Sbjct: 374 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 433
Query: 120 SRS---------------------RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS 158
+ER ++ + R R ++RE + ++R+ +R R+ +
Sbjct: 434 EEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE-YEKEAEREEERRREMAKE 492
Query: 159 RSRSD---SDVDRGRDRRKRERG-----REKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R D D RD K RG R + R + R ++R + + ++++R
Sbjct: 493 AKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQR 549
>gb|AAF19255.1|AC004858_3 U1 small ribonucleoprotein 1SNRP homolog; match to PID:g4050087
[Homo sapiens]
Length = 784
Score = 87.4 bits (215), Expect = 6e-16
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRDSRRRS 135
++ + Q I+ + +++ R E+ R+ R+ +R K + R R RER RDRD R +
Sbjct: 239 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD-RTKE 297
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQ 194
R R+R+ R DRDRDR+R S R++ RS S ++ RDR R+RER RE+ R R R ++
Sbjct: 298 RDRDRD-RERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERERERE 355
Query: 195 RRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPA--ERVK------AKMKLQ 246
R E + +E+ K + + + + KL A ER+K K +
Sbjct: 356 REREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE 415
Query: 247 LSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQ 306
+ A R+ +R R E K+A E +E +DD K+ +R SA++ + D+
Sbjct: 416 YEKEAEREEER-----RREMAKEAKRLKEFLEDYDDDRDDPKY----YRGSALQKRLRDR 466
Score = 84.7 bits (208), Expect = 4e-15
Identities = 80/287 (27%), Positives = 116/287 (39%), Gaps = 27/287 (9%)
Query: 84 IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERN-- 141
I ++ K T ++ E+ + R ++RR R R RER R+R R R R RER
Sbjct: 218 ISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERERERE 277
Query: 142 -----SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-------RERGREKGRRRSRSV 189
R +RDRDRDR R R R D + DR RDR + R R REK R R R
Sbjct: 278 KEKERERERERDRDRDRTKERDRDR-DRERDRDRDRERSSDRNKDRSRSREKSRDRERER 336
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSE 249
++R E + +ER + E + + D K D ER K + KL+ E
Sbjct: 337 EREREREREREREREREREREREREREREREKD-KKRDREEDEEDAYERRKLERKLREKE 395
Query: 250 TAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQA 309
A + +R WE E K + E E + K + F ED
Sbjct: 396 AAYQ--ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEF------LEDYDDD 447
Query: 310 AHDEAMFGAPAPPPPTSSTDSE---PERENEKEVDNKKDLVSSLLSE 353
D + A + E ER+ ++E + +++ LL+E
Sbjct: 448 RDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAE 494
Score = 79.0 bits (193), Expect = 2e-13
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
+R+ + + + + K+K R ++ RD DR + R R R RER DR ++ RS
Sbjct: 265 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDR-NKDRS 323
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSP--- 191
RSRE+ SR +R+R+R+R+ R R R + + +R R+R R+RER REK ++R R
Sbjct: 324 RSREK-SRDRERERERERERERERER-EREREREREREREREREREKDKKRDREEDEEDA 381
Query: 192 ----RKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQL 247
+ +R+ K + +ER K E+R+ K +Y K + +AK +
Sbjct: 382 YERRKLERKLREKEAAYQERLKNWEIRERKKTR-EYEKEAEREEERRREMAKEAKRLKEF 440
Query: 248 SETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRED-- 305
E D D + K ++E+E E D K + R + D
Sbjct: 441 LEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPD 500
Query: 306 -QIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKD 345
++Q EA P +SE E E ++E + K++
Sbjct: 501 AELQRMEQEA--ERRRQPQIKQEPESEEEEEEKQEKEEKRE 539
Score = 37.0 bits (84), Expect = 0.96
Identities = 33/177 (18%), Positives = 70/177 (38%), Gaps = 30/177 (16%)
Query: 60 SSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSR 119
SS S + DR+ + + + + +++ R E+ R+ ++ K+R R
Sbjct: 315 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 374
Query: 120 SRS---------------------RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS 158
+ER ++ + R R ++RE + ++R+ +R R+ +
Sbjct: 375 EEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE-YEKEAEREEERRREMAKE 433
Query: 159 RSRSD---SDVDRGRDRRKRERG-----REKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R D D RD K RG R + R + R ++R + + ++++R
Sbjct: 434 AKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQR 490
>ref|XP_641608.1| putative CMGC family protein kinase [Dictyostelium discoideum]
gi|60469637|gb|EAL67626.1| putative protein
serine/threonine kinase [Dictyostelium discoideum]
Length = 811
Score = 87.4 bits (215), Expect = 6e-16
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 36/357 (10%)
Query: 24 KQGLGFSTSTSNDA----VPKPGSSLVSSSSFLSQFVKASSSSTTTTASTTAPSDSDRKS 79
K+GL S+ T ND V P S + + + +S T+++ +PS + S
Sbjct: 11 KRGLESSSPTINDPKKVKVESPSSG--KEDGEVDEVTSSPASRETSSSKLMSPSKNQSSS 68
Query: 80 QLQSIQN-----KLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRDSRR 133
+S + + K + + SR ++ RD SRD DR + R R R R+R RDRD R
Sbjct: 69 SSRSYHDSNNGYRRKDERYSSSRSYDRNYRDRDISRDGDRERDRDRERDRDRDRDRD-RD 127
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRK 193
R R R+R +RDRDRDRD R R R D D DR R+ R+R+R R R SR+ R
Sbjct: 128 RDRDRDR-----ERDRDRDRDRDRDRDR-DRDRDRERE-RERDRDRNSQERGSRNSHERD 180
Query: 194 QRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAP-AERVKAKMKLQLSETAA 252
R + S D ++ + + G ++ L Y+ A + V+ K + +++
Sbjct: 181 YRDNRDYSRDSRDNMDSRDNKNGSRQSINNNTL--SYEKQADRKDEVRVKDNISVNDDKT 238
Query: 253 RDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAAHD 312
+ + + P + ED+ + K I E+++Q
Sbjct: 239 NHGENLTNESITATSTNEPTKPAVII-EEDEETKTKRI-----------LEENRLQRQLI 286
Query: 313 EAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLSETVLARPKGSWRDRVRQ 369
+ P P TSS S E+E N + + ++LA+ + +++ +
Sbjct: 287 MEKYNKEQPQPITSSL-STTEKEQSNTNTNSNSTPVATTTTSILAKSPSNLENQIEE 342
>gb|AAC97961.1| S164 [Homo sapiens]
Length = 735
Score = 87.4 bits (215), Expect = 6e-16
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRDSRRRS 135
++ + Q I+ + +++ R E+ R+ R+ +R K + R R RER RDRD R +
Sbjct: 190 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRD-RTKE 248
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQ 194
R R+R+ R DRDRDR+R S R++ RS S ++ RDR R+RER RE+ R R R ++
Sbjct: 249 RDRDRD-RERDRDRDRERSSDRNKDRSRSR-EKSRDRERERERERERERERERERERERE 306
Query: 195 RRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPA--ERVK------AKMKLQ 246
R E + +E+ K + + + + KL A ER+K K +
Sbjct: 307 REREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE 366
Query: 247 LSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQ 306
+ A R+ +R R E K+A E +E +DD K+ +R SA++ + D+
Sbjct: 367 YEKEAEREEER-----RREMAKEAKRLKEFLEDYDDDRDDPKY----YRGSALQKRLRDR 417
Score = 84.7 bits (208), Expect = 4e-15
Identities = 80/287 (27%), Positives = 116/287 (39%), Gaps = 27/287 (9%)
Query: 84 IQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERN-- 141
I ++ K T ++ E+ + R ++RR R R RER R+R R R R RER
Sbjct: 169 ISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERERERERE 228
Query: 142 -----SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRK-------RERGREKGRRRSRSV 189
R +RDRDRDR R R R D + DR RDR + R R REK R R R
Sbjct: 229 KEKERERERERDRDRDRTKERDRDR-DRERDRDRDRERSSDRNKDRSRSREKSRDRERER 287
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSE 249
++R E + +ER + E + + D K D ER K + KL+ E
Sbjct: 288 EREREREREREREREREREREREREREREREKD-KKRDREEDEEDAYERRKLERKLREKE 346
Query: 250 TAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQA 309
A + +R WE E K + E E + K + F ED
Sbjct: 347 AAYQ--ERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEF------LEDYDDD 398
Query: 310 AHDEAMFGAPAPPPPTSSTDSE---PERENEKEVDNKKDLVSSLLSE 353
D + A + E ER+ ++E + +++ LL+E
Sbjct: 399 RDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAE 445
Score = 79.0 bits (193), Expect = 2e-13
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS 135
+R+ + + + + K+K R ++ RD DR + R R R RER DR ++ RS
Sbjct: 216 EREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDR-NKDRS 274
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSP--- 191
RSRE+ SR +R+R+R+R+ R R R + + +R R+R R+RER REK ++R R
Sbjct: 275 RSREK-SRDRERERERERERERERER-EREREREREREREREREREKDKKRDREEDEEDA 332
Query: 192 ----RKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQL 247
+ +R+ K + +ER K E+R+ K +Y K + +AK +
Sbjct: 333 YERRKLERKLREKEAAYQERLKNWEIRERKKTR-EYEKEAEREEERRREMAKEAKRLKEF 391
Query: 248 SETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKRED-- 305
E D D + K ++E+E E D K + R + D
Sbjct: 392 LEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPD 451
Query: 306 -QIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKD 345
++Q EA P +SE E E ++E + K++
Sbjct: 452 AELQRMEQEA--ERRRQPQIKQEPESEEEEEEKQEKEEKRE 490
Score = 37.0 bits (84), Expect = 0.96
Identities = 33/177 (18%), Positives = 70/177 (38%), Gaps = 30/177 (16%)
Query: 60 SSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSR 119
SS S + DR+ + + + + +++ R E+ R+ ++ K+R R
Sbjct: 266 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 325
Query: 120 SRS---------------------RERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRS 158
+ER ++ + R R ++RE + ++R+ +R R+ +
Sbjct: 326 EEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTRE-YEKEAEREEERRREMAKE 384
Query: 159 RSRSD---SDVDRGRDRRKRERG-----REKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R D D RD K RG R + R + R ++R + + ++++R
Sbjct: 385 AKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQR 441
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.307 0.123 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 591,583,220
Number of Sequences: 2540612
Number of extensions: 25923719
Number of successful extensions: 446183
Number of sequences better than 10.0: 10741
Number of HSP's better than 10.0 without gapping: 4546
Number of HSP's successfully gapped in prelim test: 6654
Number of HSP's that attempted gapping in prelim test: 231982
Number of HSP's gapped (non-prelim): 66908
length of query: 369
length of database: 863,360,394
effective HSP length: 129
effective length of query: 240
effective length of database: 535,621,446
effective search space: 128549147040
effective search space used: 128549147040
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 76 (33.9 bits)
Medicago: description of AC146914.1