
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146864.1 + phase: 0
(194 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42600.1| unknown protein [Arabidopsis thaliana] gi|289509... 87 2e-16
gb|AAC69944.1| hypothetical protein [Arabidopsis thaliana] gi|25... 61 1e-08
ref|NP_180793.2| TraB family protein [Arabidopsis thaliana] 61 1e-08
gb|AAT93860.1| unknown protein [Oryza sativa (japonica cultivar-... 58 1e-07
pir||C86187 YUP8H12.12 [imported] - Arabidopsis thaliana gi|2388... 51 2e-05
gb|AAO51377.1| similar to Plasmodium falciparum (isolate 3D7). H... 46 7e-04
emb|CAE61510.1| Hypothetical protein CBG05409 [Caenorhabditis br... 44 0.002
gb|AAN14341.1| CG12360-PB, isoform B [Drosophila melanogaster] g... 44 0.003
ref|NP_501005.1| TraB determinant (4H346Co) [Caenorhabditis eleg... 44 0.003
ref|NP_501004.1| TraB determinant (4H346Co) [Caenorhabditis eleg... 44 0.003
gb|AAP40537.1| Hypothetical protein F38A5.2b [Caenorhabditis ele... 44 0.003
gb|AAP40536.1| Hypothetical protein F38A5.2a [Caenorhabditis ele... 44 0.003
pir||T29896 hypothetical protein F38A5.2 - Caenorhabditis elegans 44 0.003
emb|CAI42754.1| OTTHUMP00000028551 [Homo sapiens] gi|11125142|em... 43 0.006
gb|AAH93029.1| PP2447 protein [Homo sapiens] gi|37782444|gb|AAP3... 43 0.006
ref|XP_515215.1| PREDICTED: similar to LP6054 [Pan troglodytes] 43 0.006
gb|AAH55655.1| Unknown (protein for MGC:66436) [Danio rerio] gi|... 43 0.006
ref|NP_248368.1| pheromone shutdown protein (traB) [Methanocaldo... 42 0.009
gb|EAL27644.1| GA11581-PA [Drosophila pseudoobscura] 42 0.009
ref|XP_538316.1| PREDICTED: similar to pannexin 2 [Canis familia... 42 0.012
>dbj|BAC42600.1| unknown protein [Arabidopsis thaliana] gi|28950927|gb|AAO63387.1|
At1g05270 [Arabidopsis thaliana]
gi|30679206|ref|NP_172019.3| TraB family protein
[Arabidopsis thaliana] gi|51969614|dbj|BAD43499.1|
unknown protein [Arabidopsis thaliana]
Length = 371
Score = 87.4 bits (215), Expect = 2e-16
Identities = 40/78 (51%), Positives = 57/78 (72%)
Query: 48 RLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEIVFLEL 107
++ELP+EL K+V+ L+C+S GG CDVYLVGT H +K+S +VE I+ LKPE+VF+EL
Sbjct: 84 KVELPEELAKSVVILTCESTADGGSCDVYLVGTAHVSKQSCLEVEAIISILKPEVVFVEL 143
Query: 108 CSDRQEVLLHDNMEVSTI 125
CS R VL +++ T+
Sbjct: 144 CSSRLSVLKPQTLKIPTM 161
>gb|AAC69944.1| hypothetical protein [Arabidopsis thaliana] gi|25370765|pir||H84731
hypothetical protein At2g32340 [imported] - Arabidopsis
thaliana
Length = 302
Score = 61.2 bits (147), Expect = 1e-08
Identities = 29/61 (47%), Positives = 43/61 (69%), Gaps = 3/61 (4%)
Query: 44 ERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNK---ESSKQVEEIVKFLKP 100
E +LELP+E K+V+ L+C+S +GG CDVYLVGT H ++ ES ++VE ++ LKP
Sbjct: 66 ETTEKLELPEEFAKSVMVLTCESTAEGGSCDVYLVGTAHVSQVILESCREVEAVISALKP 125
Query: 101 E 101
+
Sbjct: 126 Q 126
>ref|NP_180793.2| TraB family protein [Arabidopsis thaliana]
Length = 272
Score = 61.2 bits (147), Expect = 1e-08
Identities = 29/61 (47%), Positives = 43/61 (69%), Gaps = 3/61 (4%)
Query: 44 ERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNK---ESSKQVEEIVKFLKP 100
E +LELP+E K+V+ L+C+S +GG CDVYLVGT H ++ ES ++VE ++ LKP
Sbjct: 66 ETTEKLELPEEFAKSVMVLTCESTAEGGSCDVYLVGTAHVSQVILESCREVEAVISALKP 125
Query: 101 E 101
+
Sbjct: 126 Q 126
>gb|AAT93860.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 335
Score = 58.2 bits (139), Expect = 1e-07
Identities = 29/67 (43%), Positives = 45/67 (66%), Gaps = 7/67 (10%)
Query: 42 EKERQRRLELPKELTKNVIQLSCDSMEK------GGVCDVYLVGTFHGNKESSKQVEEIV 95
E ER+R+ ELP+EL K V+ L C++ + GG C VY+VGT H ++ES QV+ ++
Sbjct: 95 EGERERK-ELPEELAKGVVCLECETSPEAEAAGAGGTCRVYVVGTAHVSQESCDQVKAVI 153
Query: 96 KFLKPEI 102
+LKP++
Sbjct: 154 DYLKPQV 160
>pir||C86187 YUP8H12.12 [imported] - Arabidopsis thaliana
gi|2388570|gb|AAB71451.1| YUP8H12.12 [Arabidopsis
thaliana]
Length = 146
Score = 50.8 bits (120), Expect = 2e-05
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 48 RLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNK 85
++ELP+EL K+V+ L+C+S GG CDVYLVGT H +K
Sbjct: 84 KVELPEELAKSVVILTCESTADGGSCDVYLVGTAHVSK 121
>gb|AAO51377.1| similar to Plasmodium falciparum (isolate 3D7). Hypothetical
protein [Dictyostelium discoideum]
gi|66822687|ref|XP_644698.1| hypothetical protein
DDB0168039 [Dictyostelium discoideum]
gi|66822397|ref|XP_644553.1| hypothetical protein
DDB0217350 [Dictyostelium discoideum]
gi|60472844|gb|EAL70793.1| hypothetical protein
DDB0168039 [Dictyostelium discoideum]
gi|60472676|gb|EAL70627.1| hypothetical protein
DDB0217350 [Dictyostelium discoideum]
Length = 705
Score = 45.8 bits (107), Expect = 7e-04
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 75 VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDN 132
+ L+G+ H +K SS +V EI++ KP+ VF+ELCS R ++ + N + S + ++N
Sbjct: 107 IILIGSVHIHKGSSDEVSEIIRKWKPDTVFVELCSSRAGIIFNTNNDDSDYYYNNNNN 164
>emb|CAE61510.1| Hypothetical protein CBG05409 [Caenorhabditis briggsae]
Length = 453
Score = 43.9 bits (102), Expect = 0.002
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 75 VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDNAI 134
VYLVGT H +KES + V ++ ++P+ V LELC R ++ D + + ++ I
Sbjct: 158 VYLVGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISIISMDEARLLSEAKDLNTQKI 217
Query: 135 M 135
M
Sbjct: 218 M 218
>gb|AAN14341.1| CG12360-PB, isoform B [Drosophila melanogaster]
gi|7299711|gb|AAF54893.1| CG12360-PA, isoform A
[Drosophila melanogaster] gi|17944306|gb|AAL48046.1|
RE12073p [Drosophila melanogaster]
gi|24646455|ref|NP_731765.1| CG12360-PB, isoform B
[Drosophila melanogaster] gi|21357445|ref|NP_650253.1|
CG12360-PA, isoform A [Drosophila melanogaster]
Length = 532
Score = 43.5 bits (101), Expect = 0.003
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 75 VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDNAI 134
VYLVGT H ++ES V +++ ++P++V +ELC R +L ++ T+L I
Sbjct: 253 VYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHIL---KLDEKTLLEEAKSINI 309
Query: 135 MTIRCSFSCIDNQHYHSIINFFNFSQALTM 164
IR H H IN F L M
Sbjct: 310 PKIRGIL------HTHGYINGIFFILLLQM 333
>ref|NP_501005.1| TraB determinant (4H346Co) [Caenorhabditis elegans]
Length = 451
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 57 KNVIQLSCDSMEKGGVCD--VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEV 114
+N + D K + D +YL+GT H +KES + V ++ ++P+ V LELC R +
Sbjct: 136 RNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISI 195
Query: 115 LLHD 118
+ D
Sbjct: 196 ISMD 199
>ref|NP_501004.1| TraB determinant (4H346Co) [Caenorhabditis elegans]
Length = 453
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 57 KNVIQLSCDSMEKGGVCD--VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEV 114
+N + D K + D +YL+GT H +KES + V ++ ++P+ V LELC R +
Sbjct: 138 RNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISI 197
Query: 115 LLHD 118
+ D
Sbjct: 198 ISMD 201
>gb|AAP40537.1| Hypothetical protein F38A5.2b [Caenorhabditis elegans]
Length = 450
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 57 KNVIQLSCDSMEKGGVCD--VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEV 114
+N + D K + D +YL+GT H +KES + V ++ ++P+ V LELC R +
Sbjct: 136 RNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISI 195
Query: 115 LLHD 118
+ D
Sbjct: 196 ISMD 199
>gb|AAP40536.1| Hypothetical protein F38A5.2a [Caenorhabditis elegans]
Length = 452
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 57 KNVIQLSCDSMEKGGVCD--VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEV 114
+N + D K + D +YL+GT H +KES + V ++ ++P+ V LELC R +
Sbjct: 138 RNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISI 197
Query: 115 LLHD 118
+ D
Sbjct: 198 ISMD 201
>pir||T29896 hypothetical protein F38A5.2 - Caenorhabditis elegans
Length = 465
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/64 (32%), Positives = 35/64 (53%), Gaps = 2/64 (3%)
Query: 57 KNVIQLSCDSMEKGGVCD--VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEV 114
+N + D K + D +YL+GT H +KES + V ++ ++P+ V LELC R +
Sbjct: 150 RNPVLSDSDEEWKKAILDSTIYLIGTAHFSKESQEDVSNTIRAVQPDFVMLELCPSRISI 209
Query: 115 LLHD 118
+ D
Sbjct: 210 ISMD 213
>emb|CAI42754.1| OTTHUMP00000028551 [Homo sapiens] gi|11125142|emb|CAC15001.1|
hypothetical protein [Homo sapiens]
gi|20141036|sp|Q9H4I3|YV03_HUMAN Hypothetical protein
PP2447 gi|33342278|ref|NP_079480.2| hypothetical protein
LOC80305 [Homo sapiens]
Length = 376
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/84 (33%), Positives = 48/84 (56%), Gaps = 12/84 (14%)
Query: 43 KERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEI 102
K R++R LP+ +T+ V E G VY+VGT H + +S + V + ++ ++P++
Sbjct: 52 KRRRQRPNLPRTVTQLVA-------EDGS--RVYVVGTAHFSDDSKRDVVKTIREVQPDV 102
Query: 103 VFLELCSDRQEVLLHDNMEVSTIL 126
V +ELC R +L M+ ST+L
Sbjct: 103 VVVELCQYRVSML---KMDESTLL 123
>gb|AAH93029.1| PP2447 protein [Homo sapiens] gi|37782444|gb|AAP34468.1| LP6054
[Homo sapiens]
Length = 292
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/84 (33%), Positives = 48/84 (56%), Gaps = 12/84 (14%)
Query: 43 KERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEI 102
K R++R LP+ +T+ V E G VY+VGT H + +S + V + ++ ++P++
Sbjct: 52 KRRRQRPNLPRTVTQLVA-------EDGS--RVYVVGTAHFSDDSKRDVVKTIREVQPDV 102
Query: 103 VFLELCSDRQEVLLHDNMEVSTIL 126
V +ELC R +L M+ ST+L
Sbjct: 103 VVVELCQYRVSML---KMDESTLL 123
>ref|XP_515215.1| PREDICTED: similar to LP6054 [Pan troglodytes]
Length = 884
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/84 (33%), Positives = 48/84 (56%), Gaps = 12/84 (14%)
Query: 43 KERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEI 102
K R++R LP+ +T+ V E G VY+VGT H + +S + V + ++ ++P++
Sbjct: 167 KRRRQRPNLPRTVTQLVA-------EDGS--RVYVVGTAHFSDDSKRDVVKTIREVQPDV 217
Query: 103 VFLELCSDRQEVLLHDNMEVSTIL 126
V +ELC R +L M+ ST+L
Sbjct: 218 VVVELCQYRVSML---KMDESTLL 238
>gb|AAH55655.1| Unknown (protein for MGC:66436) [Danio rerio]
gi|47086787|ref|NP_997788.1| hypothetical protein
LOC322581 [Danio rerio]
Length = 360
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 43 KERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEI 102
+ RQ+ +LP+ +T+ + +G V VYLVGT H + S K V ++ ++P++
Sbjct: 42 QRRQKEPDLPETVTRL-------TTPEGSV--VYLVGTAHFSDSSKKDVATTIRAVQPDV 92
Query: 103 VFLELCSDRQEVLLHDNMEVSTILVHISD 131
V +ELC R +L M+ T+L D
Sbjct: 93 VVVELCQYRVSML---KMDEKTLLKEAKD 118
>ref|NP_248368.1| pheromone shutdown protein (traB) [Methanocaldococcus jannaschii
DSM 2661] gi|1592009|gb|AAB99373.1| pheromone shutdown
protein (traB) [Methanocaldococcus jannaschii DSM 2661]
gi|2129184|pir||D64470 probable pheromone shutdown
protein - Methanococcus jannaschii
gi|41018430|sp|Q58760|YD65_METJA Hypothetical protein
MJ1365
Length = 397
Score = 42.0 bits (97), Expect = 0.009
Identities = 21/49 (42%), Positives = 33/49 (66%), Gaps = 1/49 (2%)
Query: 73 CDVYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNME 121
CD+YL+GT H +K+S ++VE+I+ + PE + +EL DR+ L N E
Sbjct: 17 CDIYLIGTAHVSKDSIEEVEKIISSVSPEGIAVEL-DDRRFFSLITNEE 64
>gb|EAL27644.1| GA11581-PA [Drosophila pseudoobscura]
Length = 545
Score = 42.0 bits (97), Expect = 0.009
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 75 VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDNAI 134
VYLVGT H ++ES V +++ ++P++V +ELC R +L ++ T+L + I
Sbjct: 266 VYLVGTAHFSEESQDDVSFVIRNVRPDVVMVELCPSRIHIL---KLDEKTLLEEAKNINI 322
Query: 135 MTIR 138
IR
Sbjct: 323 PKIR 326
>ref|XP_538316.1| PREDICTED: similar to pannexin 2 [Canis familiaris]
Length = 1363
Score = 41.6 bits (96), Expect = 0.012
Identities = 27/85 (31%), Positives = 48/85 (55%), Gaps = 9/85 (10%)
Query: 42 EKERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPE 101
E + +RR E P L + V +L + + VY+VGT H + +S + V + ++ ++P+
Sbjct: 766 EMKLRRRRERPS-LPRTVTELVAEDGSR-----VYVVGTAHFSDDSKRDVVKTIREVQPD 819
Query: 102 IVFLELCSDRQEVLLHDNMEVSTIL 126
+V +ELC R +L M+ ST+L
Sbjct: 820 VVVVELCQYRVSML---KMDESTLL 841
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 293,087,549
Number of Sequences: 2540612
Number of extensions: 10706370
Number of successful extensions: 36745
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 36682
Number of HSP's gapped (non-prelim): 76
length of query: 194
length of database: 863,360,394
effective HSP length: 121
effective length of query: 73
effective length of database: 555,946,342
effective search space: 40584082966
effective search space used: 40584082966
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)
Medicago: description of AC146864.1