Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146862.6 - phase: 0 /pseudo
         (221 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_671823.1| expressed protein [Arabidopsis thaliana]             227  2e-58
gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cult...   209  3e-53
ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cu...   209  6e-53
ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-gr...   207  1e-52
gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cult...   206  3e-52
gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|1529288...   203  3e-51
ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-gr...   202  6e-51
gb|AAP54021.1| contains similarity to ribosomal protein [Oryza s...   201  9e-51
gb|AAL79730.1| putative ribosomal protein [Oryza sativa]              201  1e-50
gi|27575890 TPA: putative transposase [Oryza sativa (japonica cu...   199  4e-50
gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY su...   196  3e-49
gi|27575887 TPA: putative transposase [Oryza sativa (japonica cu...   196  3e-49
ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cu...   196  5e-49
ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultiv...   195  9e-49
emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultiva...   194  2e-48
gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY su...   193  3e-48
gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY su...   193  3e-48
ref|XP_450358.1| ribosomal protein-like [Oryza sativa (japonica ...   188  8e-47
ref|NP_918249.1| OSJNBa0026J14.30 [Oryza sativa (japonica cultiv...   188  8e-47
gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY su...   185  9e-46

>ref|NP_671823.1| expressed protein [Arabidopsis thaliana]
          Length = 270

 Score =  227 bits (578), Expect = 2e-58
 Identities = 118/192 (61%), Positives = 133/192 (68%), Gaps = 34/192 (17%)

Query: 3   PFDIEAYKQKRDIEDTYIVNRFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQ 62
           PFDI+AYK++ +IE+ YI+NRF +RR K+ E        DY    P +            
Sbjct: 7   PFDIKAYKRQSEIEEMYIINRFRERRNKIGE--------DY----PPH------------ 42

Query: 63  KHVFLRIVGDLSITDNYFTQRVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGG 122
                     LS +DNYFTQR DAA KEGISPL K TTTMRM AYGVAADAVDEY KIGG
Sbjct: 43  ----------LSNSDNYFTQRYDAAKKEGISPLPKYTTTMRMFAYGVAADAVDEYSKIGG 92

Query: 123 TTTLECLRRFCKGIIRLYEEVYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNC 182
           TTTLECLRRFCKGII+LYE  YLRAP QDDLQRIL VSEM+GFPG+IGSI+CM WEWK C
Sbjct: 93  TTTLECLRRFCKGIIKLYETEYLRAPTQDDLQRILRVSEMRGFPGIIGSINCMQWEWKTC 152

Query: 183 PKAWEGTLNDIN 194
           P  WEG    +N
Sbjct: 153 PTVWEGNTTRVN 164


>gb|AAP55032.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|37536886|ref|NP_922745.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
           gi|12597879|gb|AAG60187.1| hypothetical protein [Oryza
           sativa]
          Length = 513

 Score =  209 bits (533), Expect = 3e-53
 Identities = 100/221 (45%), Positives = 135/221 (60%), Gaps = 33/221 (14%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E A+ +L  DYFA +P Y  A FRRR+RM++HVFL IV +L    +YFT RVD     G 
Sbjct: 62  EGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGCLGH 121

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SPL KCT  +RMLAYG AAD +DEY+K+  +T LECL  F +G++ ++   YLR P  +D
Sbjct: 122 SPLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAED 181

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           L+R+L V E +GFPGM+GSIDCMHW WKNCP AW+                         
Sbjct: 182 LERLLQVGESRGFPGMLGSIDCMHWRWKNCPTAWKGQYTRGDQKYPTIILEAVASYDLHI 241

Query: 188 --------GTLNDINVLDRSPVFDDVNQGKTPRVEFLCEST 220
                   G+ NDINVL++SP+F +  +G+ P+++F+   T
Sbjct: 242 WHAFFGIPGSNNDINVLNQSPLFIEAIKGEAPQIQFIVNGT 282


>ref|XP_470831.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|29824487|gb|AAP04202.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 626

 Score =  209 bits (531), Expect = 6e-53
 Identities = 103/226 (45%), Positives = 141/226 (61%), Gaps = 36/226 (15%)

Query: 23  RFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQ 82
           R+I R +   EA+N  L+ +YF+  P Y D MFRRR+RM+K +FLRIV  LS    YFT 
Sbjct: 242 RYIPRNR---EASNADLVANYFSESPIYTDKMFRRRFRMRKPLFLRIVSALSEWSPYFTN 298

Query: 83  RVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEE 142
           R+DA  + G SPL KCT  +RMLAYG  AD +DE +KIG  T LECL +F +G+I ++ +
Sbjct: 299 RLDATGRAGHSPLQKCTAAIRMLAYGTPADQLDEVLKIGPNTALECLGKFAEGVIEIFRK 358

Query: 143 VYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAW---------------- 186
            YLRAP  D+++R+L V++ +GFPGM+G+IDCMHW WKNCP +W                
Sbjct: 359 EYLRAPRSDEVERLLQVADSRGFPGMLGNIDCMHWAWKNCPVSWCGQFTRGDKGVPTMIL 418

Query: 187 -----------------EGTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                             G+ NDINVL++SP+F +  +G+ PRV+F
Sbjct: 419 EAVASKDLRIWHDFFATAGSNNDINVLNKSPLFIEALRGEAPRVQF 464


>ref|NP_918048.1| B1074C08.24 [Oryza sativa (japonica cultivar-group)]
          Length = 408

 Score =  207 bits (528), Expect = 1e-52
 Identities = 101/214 (47%), Positives = 137/214 (63%), Gaps = 33/214 (15%)

Query: 35  ANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGISP 94
           A+  LI DYF+ +P Y ++MFR R+RM + +FLRIV  L     YFT +VD + ++G+SP
Sbjct: 62  AHHCLIADYFSEDPLYPESMFRTRFRMGRPLFLRIVSALGRWSPYFTLKVDCSGRQGLSP 121

Query: 95  LAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDDLQ 154
           L KCTTTMRMLAYG  AD++DEY+KIG +T+L+CL  F +G+I ++   YLR P  +D++
Sbjct: 122 LQKCTTTMRMLAYGSPADSLDEYLKIGKSTSLQCLDMFARGVIEVFGSEYLRRPTYEDVE 181

Query: 155 RILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------------------ 190
           RIL V+E +GFPGM+GSIDCMHW W+ CP AW G                          
Sbjct: 182 RILQVNESRGFPGMLGSIDCMHWRWEKCPTAWRGQFTRGDYGVPTIILEAVATRDLRIWH 241

Query: 191 ---------NDINVLDRSPVFDDVNQGKTPRVEF 215
                    NDINVL++SP+F DV +G+ PRV+F
Sbjct: 242 AFFGVAGSNNDINVLNQSPLFLDVLKGEAPRVKF 275


>gb|AAV44104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|55167955|gb|AAV43824.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 444

 Score =  206 bits (525), Expect = 3e-52
 Identities = 101/214 (47%), Positives = 132/214 (61%), Gaps = 33/214 (15%)

Query: 35  ANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGISP 94
           A+ RL+ DYFA  P Y + MFR R+RM K +FLRIV  LS    YFTQR D +    +SP
Sbjct: 68  AHSRLVADYFAEHPLYPERMFRTRFRMHKPLFLRIVEALSQWSPYFTQRGDCSGHTSLSP 127

Query: 95  LAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDDLQ 154
           L KCT  +RMLAYG  ADA+DEY+KIG +T LECL  F +G+I ++   YLR P ++D++
Sbjct: 128 LQKCTAALRMLAYGTPADALDEYLKIGKSTALECLEMFSRGVIVVFGGTYLRRPTREDVE 187

Query: 155 RILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------------------ 190
            ILHV+E +GFPGM+GSIDCMHW W++CP+AW G                          
Sbjct: 188 HILHVNESRGFPGMLGSIDCMHWRWESCPRAWRGQFTRGDYKVPTIILEAVASHDLWIWH 247

Query: 191 ---------NDINVLDRSPVFDDVNQGKTPRVEF 215
                    NDINVL++SP+F D  +G+ PRV +
Sbjct: 248 AFFGVAGSNNDINVLNQSPLFLDTVRGEAPRVHY 281


>gb|AAM45005.1| unknown protein [Arabidopsis thaliana] gi|15292885|gb|AAK92813.1|
           unknown protein [Arabidopsis thaliana]
           gi|9294258|dbj|BAB02160.1| unnamed protein product
           [Arabidopsis thaliana] gi|18400709|ref|NP_566505.1|
           expressed protein [Arabidopsis thaliana]
          Length = 415

 Score =  203 bits (516), Expect = 3e-51
 Identities = 99/215 (46%), Positives = 135/215 (62%), Gaps = 32/215 (14%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E  +  L +DYF++   +    FRRR+RM+K +FLRIV  LS    +F  R DA  + G 
Sbjct: 53  EEGHVLLWNDYFSDNAIFPLQTFRRRFRMKKPLFLRIVDRLSSELMFFQHRRDATGRFGH 112

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SP+ KCT  +R+LAYG A+DAVDEY+++G TT + CL  F KGII  + + YLRAP   +
Sbjct: 113 SPIQKCTAAIRLLAYGYASDAVDEYLRMGETTAMSCLENFTKGIISFFGDEYLRAPTATN 172

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           L+R+L++ +++GFPGMIGS+DCMHWEWKNCP AW+                         
Sbjct: 173 LRRLLNIGKIRGFPGMIGSLDCMHWEWKNCPTAWKGQYTRGSGKPTIVLEAIASQDLWIW 232

Query: 188 -------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                  GTLNDIN+LDRSP+FDD+ QG+ P V++
Sbjct: 233 HVFFGPPGTLNDINILDRSPIFDDILQGRAPNVKY 267


>ref|NP_915242.1| P0703B11.15 [Oryza sativa (japonica cultivar-group)]
          Length = 401

 Score =  202 bits (514), Expect = 6e-51
 Identities = 97/203 (47%), Positives = 126/203 (61%), Gaps = 33/203 (16%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E A+ +L  DYFA +P Y  A FRRR+RM++HVFL IV +L    +YFT RVD   + G 
Sbjct: 62  EGAHDQLFADYFAEDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRVDCTGRLGH 121

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SPL KCT  +RMLAYG AADA+DEY+K+  +T LECL  F +G++ ++   YLR P  +D
Sbjct: 122 SPLQKCTAAIRMLAYGTAADALDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAED 181

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           L+R+L V E +GFPGM+GSIDCMHW WKNCP AW+                         
Sbjct: 182 LERLLQVGESRGFPGMLGSIDCMHWRWKNCPNAWKGQYTRGDQKYPTIILEAIASYDLHI 241

Query: 188 --------GTLNDINVLDRSPVF 202
                   G+ NDINVL++SP+F
Sbjct: 242 WHAFFGIPGSNNDINVLNQSPLF 264


>gb|AAP54021.1| contains similarity to ribosomal protein [Oryza sativa (japonica
           cultivar-group)] gi|37534864|ref|NP_921734.1| contains
           similarity to ribosomal protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 308

 Score =  201 bits (512), Expect = 9e-51
 Identities = 96/221 (43%), Positives = 133/221 (59%), Gaps = 33/221 (14%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E A+ +L  DYFA +P Y  A FRRR+RM++HVFL IV +L    +YFT R++   + G 
Sbjct: 62  EGAHDQLFADYFAKDPLYSAATFRRRFRMRRHVFLHIVDELGKWSSYFTHRINCTGRLGH 121

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SPL KCT  +RMLAYG AAD +DEY+K+  +T LECL  F +G++ ++   YLR P  +D
Sbjct: 122 SPLQKCTAAIRMLAYGTAADTLDEYLKVPQSTALECLENFVEGVVEVFSSRYLRRPTAED 181

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           L+R+L V E +GFP M+GSIDCMHW WKNCP AW+                         
Sbjct: 182 LERLLQVGESRGFPRMLGSIDCMHWRWKNCPTAWKGQYTRGDQKYPTIILEAVASYDLHI 241

Query: 188 --------GTLNDINVLDRSPVFDDVNQGKTPRVEFLCEST 220
                   G+ NDINVL++SP+F +  + + P+++F    T
Sbjct: 242 WHAFFGIPGSNNDINVLNQSPLFIEAIKCEAPQIQFTVNGT 282


>gb|AAL79730.1| putative ribosomal protein [Oryza sativa]
          Length = 915

 Score =  201 bits (511), Expect = 1e-50
 Identities = 103/231 (44%), Positives = 135/231 (57%), Gaps = 36/231 (15%)

Query: 23  RFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQ 82
           R+I R +   E  ++ L+ +YF+  P Y D  FRRR+RM K +FLRIV  LS  D +FTQ
Sbjct: 529 RYIPRPR---EKGHEDLVANYFSANPIYTDEQFRRRFRMNKPLFLRIVNALSNWDQFFTQ 585

Query: 83  RVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEE 142
           RVDA  ++  SPL KCT  +RML YG  ADA+DE +KI  +T+LECL +F  GII  +  
Sbjct: 586 RVDATGRDSHSPLQKCTAAIRMLGYGTPADALDEVLKIAASTSLECLGKFAVGIIECFGS 645

Query: 143 VYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAW---------------- 186
            YLR P  D+L++IL  +E +GFPGMIGSIDCMHW+WKNCPK W                
Sbjct: 646 EYLRPPTSDELEKILQENEARGFPGMIGSIDCMHWQWKNCPKGWAGMFINGFKGKPTMIL 705

Query: 187 -----------------EGTLNDINVLDRSPVFDDVNQGKTPRVEFLCEST 220
                             G+ NDI VL++SP+F    +G+ PRV +    T
Sbjct: 706 EAVASRDLRIWHAFFGNAGSQNDIQVLNKSPLFIHAIKGEAPRVSYTVNGT 756


>gi|27575890 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
           gi|22830897|dbj|BAC15771.1| B [Oryza sativa (japonica
           cultivar-group)]
          Length = 455

 Score =  199 bits (507), Expect = 4e-50
 Identities = 98/221 (44%), Positives = 134/221 (60%), Gaps = 33/221 (14%)

Query: 29  KKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAAN 88
           K+  E A+Q L++DYF+  P Y   +FRRR+RM + +FLRIV  L    +YFTQRVDAA 
Sbjct: 61  KRPREEAHQNLVNDYFSENPLYPSNIFRRRFRMYRPLFLRIVDALGQWSDYFTQRVDAAG 120

Query: 89  KEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAP 148
           ++G+SPL KCT  +R LA G  AD +DEY+KIG TT ++ ++ F KGI  ++ E YLR P
Sbjct: 121 RQGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMDAMKNFVKGIREVFGERYLRRP 180

Query: 149 NQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------------ 190
             +D +R+L + E +GFPGM GSIDCMHW+W+ CP AW+G                    
Sbjct: 181 TVEDTERLLELGERRGFPGMFGSIDCMHWQWERCPTAWKGQFTRGDQKVPTLILEAVASH 240

Query: 191 ---------------NDINVLDRSPVFDDVNQGKTPRVEFL 216
                          NDINVL RS VF +  +G+ PRV+++
Sbjct: 241 DLWIWHAFFGVAGSNNDINVLSRSTVFINELKGQAPRVQYM 281


>gb|AAX94933.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
           sativa (japonica cultivar-group)]
           gi|50252817|dbj|BAD29050.1| ribosomal protein-like
           [Oryza sativa (japonica cultivar-group)]
          Length = 447

 Score =  196 bits (499), Expect = 3e-49
 Identities = 97/221 (43%), Positives = 133/221 (59%), Gaps = 33/221 (14%)

Query: 29  KKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAAN 88
           K+  E A+Q+L++DYF+  P Y   +FRRR+RM + +FLRIV  L     YFTQRVDA N
Sbjct: 60  KRPREEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRVDAVN 119

Query: 89  KEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAP 148
           ++G+SPL KCT  +R LA G  AD +DEY+KIG TT +E ++ F KG+  ++ E YLR P
Sbjct: 120 RKGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERYLRRP 179

Query: 149 NQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------------ 190
             +D +R+L + E +GFPGM GSIDCMHW W+ CP AW+G                    
Sbjct: 180 TMEDTERLLQLGEKRGFPGMFGSIDCMHWHWERCPVAWKGQFTRGDQKVPTLILEAVASH 239

Query: 191 ---------------NDINVLDRSPVFDDVNQGKTPRVEFL 216
                          NDINVL++S VF    +G+ PRV+++
Sbjct: 240 DLWIWHAFFGAAGSNNDINVLNQSTVFIKELKGQAPRVQYM 280


>gi|27575887 TPA: putative transposase [Oryza sativa (japonica cultivar-group)]
          Length = 482

 Score =  196 bits (499), Expect = 3e-49
 Identities = 97/221 (43%), Positives = 133/221 (59%), Gaps = 33/221 (14%)

Query: 29  KKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAAN 88
           K+  E A+Q+L++DYF+  P Y   +FRRR+RM + +FLRIV  L     YFTQRVDA N
Sbjct: 95  KRPREEAHQQLVNDYFSENPLYPSKIFRRRFRMSRPLFLRIVEALGQWSVYFTQRVDAVN 154

Query: 89  KEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAP 148
           ++G+SPL KCT  +R LA G  AD +DEY+KIG TT +E ++ F KG+  ++ E YLR P
Sbjct: 155 RKGLSPLQKCTAAIRQLATGSGADELDEYLKIGETTAMEAMKNFVKGLQDVFGERYLRRP 214

Query: 149 NQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------------ 190
             +D +R+L + E +GFPGM GSIDCMHW W+ CP AW+G                    
Sbjct: 215 TMEDTERLLQLGEKRGFPGMFGSIDCMHWHWERCPVAWKGQFTRGDQKVPTLILEAVASH 274

Query: 191 ---------------NDINVLDRSPVFDDVNQGKTPRVEFL 216
                          NDINVL++S VF    +G+ PRV+++
Sbjct: 275 DLWIWHAFFGAAGSNNDINVLNQSTVFIKELKGQAPRVQYM 315


>ref|XP_475696.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|48475076|gb|AAT44145.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 443

 Score =  196 bits (497), Expect = 5e-49
 Identities = 99/231 (42%), Positives = 134/231 (57%), Gaps = 36/231 (15%)

Query: 23  RFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQ 82
           R+I R +   E  +  L+ +YF+  P Y D MFRRR+RM++ +FLRIV +LS    YFTQ
Sbjct: 60  RYIPRNR---ERGHDDLVANYFSANPIYTDEMFRRRFRMRRPLFLRIVHELSEWSPYFTQ 116

Query: 83  RVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEE 142
           RVDA  +  +SPL KC   +RML YG AAD +DE ++I  +T LECL +F +G+I  + +
Sbjct: 117 RVDATGRNSLSPLQKCIAAIRMLGYGTAADQLDEVLRIAASTCLECLGKFAEGVIEKFGD 176

Query: 143 VYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAW---------------- 186
            YLR P  D+L++IL  +E +GFPGM GSIDCMHW WKNCPK W                
Sbjct: 177 EYLRLPRADELEKILQENEARGFPGMYGSIDCMHWPWKNCPKGWAGMFTSGNKGVPTMIL 236

Query: 187 -----------------EGTLNDINVLDRSPVFDDVNQGKTPRVEFLCEST 220
                             G+ NDINVL++SP+F    +G+ P V +    T
Sbjct: 237 EAVATKDLRIWHAFFGTAGSQNDINVLNKSPLFIQAIKGEAPTVHYNVNGT 287


>ref|XP_471573.1| OSJNBb0032D24.14 [Oryza sativa (japonica cultivar-group)]
           gi|38344363|emb|CAE04084.2| OSJNBb0032D24.14 [Oryza
           sativa (japonica cultivar-group)]
          Length = 450

 Score =  195 bits (495), Expect = 9e-49
 Identities = 100/231 (43%), Positives = 130/231 (55%), Gaps = 36/231 (15%)

Query: 23  RFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQ 82
           R+I R     E  + RL   YF+  P Y D  FRRR+RM++H+FLRIV  L +   YF  
Sbjct: 66  RYISRD---HEDDHNRLFAKYFSESPLYTDDQFRRRFRMRRHLFLRIVQALGVWSPYFRL 122

Query: 83  RVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEE 142
           R DA  K G+SPL KCT  MRMLAYG  AD +DE   +  +T +EC+  F +G+  L+ E
Sbjct: 123 RRDAFGKVGLSPLQKCTAAMRMLAYGTPADLMDETFGVAESTAMECMINFVQGVRHLFGE 182

Query: 143 VYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWEGTL------------ 190
            YLR P  +D+QR+L   E  GFPGM+GSIDCMHWEW++CP AW+G              
Sbjct: 183 QYLRRPTVEDIQRLLQFGEAHGFPGMLGSIDCMHWEWQSCPVAWKGQFTRGDYGVPTIML 242

Query: 191 ---------------------NDINVLDRSPVFDDVNQGKTPRVEFLCEST 220
                                NDINVLD+SP+F ++ QG+ P V+F    T
Sbjct: 243 EAVASLDLWIWHAFFGAAGSNNDINVLDQSPLFTEMIQGRAPPVQFTINGT 293


>emb|CAE03097.2| OSJNBa0017B10.12 [Oryza sativa (japonica cultivar-group)]
           gi|50927987|ref|XP_473521.1| OSJNBa0017B10.12 [Oryza
           sativa (japonica cultivar-group)]
          Length = 454

 Score =  194 bits (493), Expect = 2e-48
 Identities = 104/226 (46%), Positives = 129/226 (57%), Gaps = 36/226 (15%)

Query: 23  RFIQRRKKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQ 82
           ++I+R +   + A  RL   YF   P Y+D  FR RYRM+KH+FL IV  LS     F Q
Sbjct: 68  KYIRRER---QDAEDRLKAYYFLENPMYNDTQFRWRYRMKKHLFLHIVQTLSHWSPVFQQ 124

Query: 83  RVDAANKEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEE 142
           R DA  K G SPL KCT  +RMLAYG +AD +DE ++I  TT +E L  FCKGII  +  
Sbjct: 125 RKDAFGKVGFSPLLKCTAALRMLAYGTSADILDENLQIAETTVIESLVNFCKGIIDCFGP 184

Query: 143 VYLRAPNQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE--------------- 187
            YLR P  +D+QR+LHV E +GFPGM+GSIDCMHWEWKNCP AW+               
Sbjct: 185 KYLRRPTAEDIQRLLHVGEARGFPGMLGSIDCMHWEWKNCPVAWKGQYTRGDHGVPTVML 244

Query: 188 ------------------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                             G+ NDINVL++S +F    QG  P V F
Sbjct: 245 EAVASHDLWIWHAFFGVAGSNNDINVLNQSSLFTAQRQGIAPDVHF 290


>gb|AAX96772.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
           sativa (japonica cultivar-group)]
          Length = 403

 Score =  193 bits (490), Expect = 3e-48
 Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 33/216 (15%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E +   L+ DYF   P Y+D  FRRR+RM+KH+FLRIV  L   D YFT R+DA N+ G+
Sbjct: 75  EESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRMDALNRPGL 134

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SPL KCT+ +  L  G  AD +DEY+ IG +TT+ECL+ F KG+I ++   YLR P   D
Sbjct: 135 SPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEYLRRPMVQD 194

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           ++R++ + E +GFPGM+GSIDCMHW W+ CP AW+                         
Sbjct: 195 VERLVQIGERRGFPGMLGSIDCMHWHWEKCPVAWKEMYTRGNQGVPTVILEAVASHDRWI 254

Query: 188 --------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                   G+ NDINVL++SP+F    +G+ P+V++
Sbjct: 255 WHAFFGVAGSNNDINVLNQSPLFVQQLRGEGPQVQY 290


>gb|AAX96665.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
           sativa (japonica cultivar-group)]
          Length = 408

 Score =  193 bits (490), Expect = 3e-48
 Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 33/216 (15%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           E +   L+ DYF   P Y+D  FRRR+RM+KH+FLRIV  L   D YFT R+DA N+ G+
Sbjct: 75  EESKHGLLKDYFVQNPVYNDTTFRRRFRMKKHLFLRIVEALGQWDKYFTLRMDALNRPGL 134

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           SPL KCT+ +  L  G  AD +DEY+ IG +TT+ECL+ F KG+I ++   YLR P   D
Sbjct: 135 SPLKKCTSAICQLGNGSPADQLDEYLNIGDSTTVECLKMFVKGVIEVFGAEYLRRPMVQD 194

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE------------------------- 187
           ++R++ + E +GFPGM+GSIDCMHW W+ CP AW+                         
Sbjct: 195 VERLVQIGERRGFPGMLGSIDCMHWHWEKCPVAWKEMYTRGNQGVPTVILEAVASHDRWI 254

Query: 188 --------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                   G+ NDINVL++SP+F    +G+ P+V++
Sbjct: 255 WHAFFGVAGSNNDINVLNQSPLFVQQLRGEGPQVQY 290


>ref|XP_450358.1| ribosomal protein-like [Oryza sativa (japonica cultivar-group)]
           gi|48717071|dbj|BAD23759.1| ribosomal protein-like
           [Oryza sativa (japonica cultivar-group)]
          Length = 916

 Score =  188 bits (478), Expect = 8e-47
 Identities = 96/215 (44%), Positives = 129/215 (59%), Gaps = 32/215 (14%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           EA + RL  DYF+N PTY   +FRRR RM + +FLRI+  +   D+YF Q+ +AA   G 
Sbjct: 547 EARHLRLYQDYFSNNPTYGPVLFRRRNRMSRPLFLRIMNAIEDHDDYFVQKRNAAGLIGF 606

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           S   K T  MR LAYG+AADA+DEY+ I  +T +E LRRF K +++++E  YLR+PN++D
Sbjct: 607 SCHQKVTAAMRQLAYGIAADALDEYLGIAESTAIESLRRFVKAVVQVFEHEYLRSPNEND 666

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPK--------------------------AW 186
             R+L + E +GFPGM+GSIDCMHW+WKNCP                            W
Sbjct: 667 TTRLLELGEDRGFPGMLGSIDCMHWKWKNCPTELHGMYQGHVHEPTIILEAVASKDLWIW 726

Query: 187 E------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                  G+ NDINVL RSP+F  + +GK P V +
Sbjct: 727 HAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNY 761


>ref|NP_918249.1| OSJNBa0026J14.30 [Oryza sativa (japonica cultivar-group)]
          Length = 626

 Score =  188 bits (478), Expect = 8e-47
 Identities = 96/215 (44%), Positives = 129/215 (59%), Gaps = 32/215 (14%)

Query: 33  EAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAANKEGI 92
           EA + RL  DYF+N PTY   +FRRR RM + +FLRI+  +   D+YF Q+ +AA   G 
Sbjct: 257 EARHLRLYQDYFSNNPTYGPVLFRRRNRMSRPLFLRIMNAIEDHDDYFVQKRNAAGLIGF 316

Query: 93  SPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAPNQDD 152
           S   K T  MR LAYG+AADA+DEY+ I  +T +E LRRF K +++++E  YLR+PN++D
Sbjct: 317 SCHQKVTAAMRQLAYGIAADALDEYLGIAESTAIESLRRFVKAVVQVFEHEYLRSPNEND 376

Query: 153 LQRILHVSEMQGFPGMIGSIDCMHWEWKNCPK--------------------------AW 186
             R+L + E +GFPGM+GSIDCMHW+WKNCP                            W
Sbjct: 377 TTRLLELGEDRGFPGMLGSIDCMHWKWKNCPTELHGMYQGHVHEPTIILEAVASKDLWIW 436

Query: 187 E------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                  G+ NDINVL RSP+F  + +GK P V +
Sbjct: 437 HAFFGMPGSHNDINVLHRSPLFAKLAEGKAPEVNY 471


>gb|AAX96400.1| transposon protein, putative, ping/pong/SNOOPY sub-class [Oryza
           sativa (japonica cultivar-group)]
          Length = 454

 Score =  185 bits (469), Expect = 9e-46
 Identities = 91/220 (41%), Positives = 128/220 (57%), Gaps = 33/220 (15%)

Query: 29  KKLEEAANQRLIDDYFANEPTYDDAMFRRRYRMQKHVFLRIVGDLSITDNYFTQRVDAAN 88
           K+  E  ++RL++DYF+ +P Y D  FR RYRM++ +FLRIV  L     YFT R DA N
Sbjct: 72  KRNREEGHRRLVEDYFSKDPIYSDKQFRARYRMRRPLFLRIVHALGEWSPYFTSRRDAIN 131

Query: 89  KEGISPLAKCTTTMRMLAYGVAADAVDEYIKIGGTTTLECLRRFCKGIIRLYEEVYLRAP 148
           ++G+SPL KCT  +R LA G   DA+DEY+  G +T LECL  F +G+I  + E YLR+P
Sbjct: 132 RQGLSPLQKCTIAIRALACGTLGDAIDEYVDTGISTALECLDWFVEGVIDNFGEEYLRSP 191

Query: 149 NQDDLQRILHVSEMQGFPGMIGSIDCMHWEWKNCPKAWE--------------------- 187
             +D+Q IL ++E +GFPGM+GSI CMHWEWKNCP  W                      
Sbjct: 192 TSEDMQHILQMNEARGFPGMLGSIGCMHWEWKNCPVIWRRHLTHTDHGATTMILEAVASN 251

Query: 188 ------------GTLNDINVLDRSPVFDDVNQGKTPRVEF 215
                       G+ N+I +L +  +F ++ +G+   V+F
Sbjct: 252 DSWIWHAFFGAIGSNNEITILGQPQLFTELLKGQAAHVQF 291


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.323    0.139    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 383,320,047
Number of Sequences: 2540612
Number of extensions: 15682036
Number of successful extensions: 30703
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 30583
Number of HSP's gapped (non-prelim): 142
length of query: 221
length of database: 863,360,394
effective HSP length: 123
effective length of query: 98
effective length of database: 550,865,118
effective search space: 53984781564
effective search space used: 53984781564
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 72 (32.3 bits)


Medicago: description of AC146862.6