BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146853.8 + phase: 0 /partial
         (71 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP04090.1| unknown protein [Arabidopsis thaliana] gi|2897369...    60  1e-08
dbj|BAB11202.1| unnamed protein product [Arabidopsis thaliana]         60  1e-08
gb|AAS45434.1| At5g24500 [Arabidopsis thaliana]                        60  1e-08
dbj|BAD62275.1| unknown protein [Oryza sativa (japonica cultivar...    34  1.1
emb|CAH00834.1| unnamed protein product [Kluyveromyces lactis NR...    32  5.6
gb|AAQ89225.1| KRTR9337 [Homo sapiens] gi|13129096|ref|NP_076999...    31  9.5
ref|NP_702575.1| hypothetical protein PF14_0686 [Plasmodium falc...    31  9.5
ref|NP_703331.1| hypothetical protein [Plasmodium falciparum 3D7...    31  9.5
ref|XP_519925.1| PREDICTED: similar to hypothetical protein MGC5...    31  9.5
dbj|BAB70767.1| unnamed protein product [Homo sapiens] gi|163067...    31  9.5
emb|CAE70245.1| Hypothetical protein CBG16734 [Caenorhabditis br...    31  9.5

>gb|AAP04090.1| unknown protein [Arabidopsis thaliana] gi|28973694|gb|AAO64164.1|
           unknown protein [Arabidopsis thaliana]
           gi|30689478|ref|NP_197838.2| expressed protein
           [Arabidopsis thaliana]
          Length = 334

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 7/60 (11%)

Query: 1   GFTKSEVTVIDTSCRVWKVDKFVF-RKNDWKIRERKQKNKFVA------KKKSKLTRELD 53
           GF++SEVTVIDTS ++WK +K VF R+N WK+RE+K K++ V+      KKK K  R+ D
Sbjct: 197 GFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKKGKSRVVSKLKKLMKKKKKKKRKCD 256


>dbj|BAB11202.1| unnamed protein product [Arabidopsis thaliana]
          Length = 306

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 7/60 (11%)

Query: 1   GFTKSEVTVIDTSCRVWKVDKFVF-RKNDWKIRERKQKNKFVA------KKKSKLTRELD 53
           GF++SEVTVIDTS ++WK +K VF R+N WK+RE+K K++ V+      KKK K  R+ D
Sbjct: 197 GFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKKGKSRVVSKLKKLMKKKKKKKRKCD 256


>gb|AAS45434.1| At5g24500 [Arabidopsis thaliana]
          Length = 276

 Score = 60.5 bits (145), Expect = 1e-08
 Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 7/60 (11%)

Query: 1   GFTKSEVTVIDTSCRVWKVDKFVF-RKNDWKIRERKQKNKFVA------KKKSKLTRELD 53
           GF++SEVTVIDTS ++WK +K VF R+N WK+RE+K K++ V+      KKK K  R+ D
Sbjct: 171 GFSRSEVTVIDTSFKIWKSEKLVFRRRNVWKVREKKGKSRVVSKLKKLMKKKKKKKRKCD 230


>dbj|BAD62275.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 304

 Score = 33.9 bits (76), Expect = 1.1
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKND-WKIRER 34
           +++EVTVIDTS   WK  K + R+   WK+R++
Sbjct: 194 SRTEVTVIDTSTDGWKAAKLLLRRGAVWKVRDK 226


>emb|CAH00834.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
           gi|50307517|ref|XP_453738.1| unnamed protein product
           [Kluyveromyces lactis]
          Length = 605

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 15  RVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTR 50
           +++K  K+   K D KI + KQK K +AK K+KL +
Sbjct: 566 KLYKKMKYSNEKKDEKIEQLKQKKKQIAKTKAKLAK 601


>gb|AAQ89225.1| KRTR9337 [Homo sapiens] gi|13129096|ref|NP_076999.1| defective in
           sister chromatid cohesion homolog 1 [Homo sapiens]
           gi|12654937|gb|AAH01316.1| Hypothetical protein MGC5528
           [Homo sapiens]
          Length = 393

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 155

Query: 63  SFFNS 67
              NS
Sbjct: 156 KDSNS 160


>ref|NP_702575.1| hypothetical protein PF14_0686 [Plasmodium falciparum 3D7]
           gi|23497761|gb|AAN37299.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 1313

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 14  CRVWKVDKFVF---RKNDWKIRERKQKNKFVAKKKSKLTRE 51
           C+   ++K+ F    KN  +IR++K+KNK   KKK K  ++
Sbjct: 65  CKYRNIEKYKFANEEKNSEQIRKKKKKNKKKIKKKKKKKKD 105


>ref|NP_703331.1| hypothetical protein [Plasmodium falciparum 3D7]
           gi|23477011|emb|CAD49077.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 851

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 17/41 (41%), Positives = 23/41 (55%), Gaps = 2/41 (4%)

Query: 13  SCRVWKVDK-FVFRKNDWKIRERKQKNKFVAKKKSKLTREL 52
           SC+ WK +K F   KNDWK+ E K+ N    K    + +EL
Sbjct: 299 SCK-WKKEKWFEELKNDWKVEENKRLNCDSLKNNKDIYKEL 338


>ref|XP_519925.1| PREDICTED: similar to hypothetical protein MGC5528 [Pan
           troglodytes]
          Length = 371

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 232 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 287

Query: 63  SFFNS 67
              NS
Sbjct: 288 KDSNS 292


>dbj|BAB70767.1| unnamed protein product [Homo sapiens] gi|16306709|gb|AAH01531.1|
           Hypothetical protein MGC5528 [Homo sapiens]
          Length = 393

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 20/65 (30%), Positives = 28/65 (42%), Gaps = 4/65 (6%)

Query: 3   TKSEVTVIDTSCRVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSKLTRELDIHGIGSSKY 62
           T  ++   D+ C +   + F F  N W++R R+ K     KK  KL  E    G  S K 
Sbjct: 100 TPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPK----LKKLKKLLMENPYEGPDSQKE 155

Query: 63  SFFNS 67
              NS
Sbjct: 156 KDSNS 160


>emb|CAE70245.1| Hypothetical protein CBG16734 [Caenorhabditis briggsae]
          Length = 164

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 15 RVWKVDKFVFRKNDWKIRERKQKNKFVAKKKSK 47
          R W+      ++N+WK++++K+K K   KKK K
Sbjct: 32 RCWRRKSGREKENEWKLKKKKKKKKKKKKKKKK 64


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.323    0.135    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,337,051
Number of Sequences: 2540612
Number of extensions: 3595500
Number of successful extensions: 16275
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 16260
Number of HSP's gapped (non-prelim): 17
length of query: 71
length of database: 863,360,394
effective HSP length: 47
effective length of query: 24
effective length of database: 743,951,630
effective search space: 17854839120
effective search space used: 17854839120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)