BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146853.5 - phase: 0 /pseudo
(235 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA87790.1| LRP1 141 2e-32
ref|NP_974772.1| lateral root primordium 1 (LRP1) [Arabidopsis t... 140 2e-32
emb|CAC42894.1| lateral root primordia (LRP1) [Arabidopsis thali... 138 1e-31
ref|NP_914676.1| putative LRP(lateral root primordia) 1 [Oryza s... 124 2e-27
gb|AAV31329.1| hypothetical protein [Oryza sativa (japonica cult... 116 6e-25
emb|CAB80297.1| putative protein [Arabidopsis thaliana] gi|29613... 103 5e-21
gb|AAX53173.1| putative zinc finger protein [Physcomitrella patens] 99 1e-19
gb|AAV68824.1| hypothetical protein AT1G19790 [Arabidopsis thali... 93 5e-18
dbj|BAB10714.1| zinc finger protein SHI-like [Arabidopsis thalia... 93 5e-18
gb|AAV68856.1| hypothetical protein AT1G75520 [Arabidopsis thali... 92 1e-17
gb|AAV68825.1| hypothetical protein AT1G19790 [Arabidopsis thali... 92 1e-17
emb|CAB62628.1| putative protein [Arabidopsis thaliana] gi|15230... 92 1e-17
gb|AAX23751.1| hypothetical protein At1g19790 [Arabidopsis thali... 92 1e-17
ref|NP_198306.1| zinc finger protein-related [Arabidopsis thaliana] 91 3e-17
ref|XP_483648.1| putative lateral root primordia (LRP1) [Oryza s... 89 1e-16
dbj|BAD46263.1| putative LRP1 [Oryza sativa (japonica cultivar-g... 89 1e-16
emb|CAB81808.1| putative protein [Arabidopsis thaliana] gi|17386... 88 2e-16
dbj|BAD54563.1| putative LRP1 [Oryza sativa (japonica cultivar-g... 86 9e-16
gb|AAD23685.1| hypothetical protein [Arabidopsis thaliana] gi|25... 80 5e-14
emb|CAE45586.1| hypothetical protein [Lotus corniculatus var. ja... 79 1e-13
>gb|AAA87790.1| LRP1
Length = 320
Score = 141 bits (355), Expect = 2e-32
Identities = 101/241 (41%), Positives = 134/241 (54%), Gaps = 36/241 (14%)
Query: 1 MSMLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDH-NSNHSLPSSASLSVGFGI 59
M M+GLRD+ L+AP+ +HHQ N DH NSN ++A+ ++G G+
Sbjct: 1 MGMVGLRDVFLVAPA-----YHHQ-------NAGVISGSDHMNSN----AAAAAALGVGV 44
Query: 60 FPLLTATPCMPQQQSQNNEVQENPSNNNNFW-NLRMCPEVVNLPKKGVITEEENHGKIAM 118
PLLTA P PQQ +++++ N NN W N E L K T + G +
Sbjct: 45 IPLLTAGP--PQQNVEDSDI--NFLGNNRRWQNNNNNHETQYLHFKS--TNQTTVGTSSN 98
Query: 119 MESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRRER 178
+G G+ CQDCGN+AKK+C RRCRTCCK RG+DCSTH+KSTW+ + RRRER
Sbjct: 99 NSGSGSGASGTA--TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRER 156
Query: 179 EVEMFAGGGDGEG-----CSGVKRQKGLLGS--SQNAAATSHSSNSNGTTPKSFATSSCH 231
+V M G G SG K+ + ++GS Q ATSH+S SN T P+SF TSS
Sbjct: 157 QV-MPTGANPTAGSSLSTSSGTKKPR-IVGSQQQQQQQATSHTSTSN-TPPQSFETSSSR 213
Query: 232 Q 232
Q
Sbjct: 214 Q 214
>ref|NP_974772.1| lateral root primordium 1 (LRP1) [Arabidopsis thaliana]
Length = 226
Score = 140 bits (354), Expect = 2e-32
Identities = 101/243 (41%), Positives = 135/243 (54%), Gaps = 36/243 (14%)
Query: 1 MSMLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDH-NSNHSLPSSASLSVGFGI 59
M M+GLRD+ L+AP+ +HHQ N DH NSN ++A+ ++G G+
Sbjct: 1 MGMVGLRDVFLVAPA-----YHHQ-------NAGVISGSDHMNSN----AAAAAALGVGV 44
Query: 60 FPLLTATPCMPQQQSQNNEVQENPSNNNNFW-NLRMCPEVVNLPKKGVITEEENHGKIAM 118
PLLTA PQQ +++++ N NN W N E L K T + G +
Sbjct: 45 IPLLTAGT--PQQNVEDSDI--NFLGNNRRWQNNNNNHETQYLHFKS--TNQTTVGTSSN 98
Query: 119 MESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRRER 178
+G G+ CQDCGN+AKK+C RRCRTCCK RG+DCSTH+KSTW+ + RRRER
Sbjct: 99 NSGSGSGASGTA--TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRER 156
Query: 179 EVEMFAGGGDGEG-----CSGVKRQKGLLGS--SQNAAATSHSSNSNGTTPKSFATSSCH 231
+V M G G SG K+ + ++GS Q ATSH+S SN T P+SF TSS
Sbjct: 157 QV-MPTGANPTAGSSLSTSSGTKKPR-IVGSQQQQQQQATSHTSTSN-TPPQSFETSSSR 213
Query: 232 QGA 234
QG+
Sbjct: 214 QGS 216
>emb|CAC42894.1| lateral root primordia (LRP1) [Arabidopsis thaliana]
gi|18416839|ref|NP_568266.1| lateral root primordium 1
(LRP1) [Arabidopsis thaliana]
gi|42573349|ref|NP_974771.1| lateral root primordium 1
(LRP1) [Arabidopsis thaliana] gi|58743288|gb|AAW81722.1|
At5g12330 [Arabidopsis thaliana]
Length = 320
Score = 138 bits (347), Expect = 1e-31
Identities = 100/241 (41%), Positives = 133/241 (54%), Gaps = 36/241 (14%)
Query: 1 MSMLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDH-NSNHSLPSSASLSVGFGI 59
M M+GLRD+ L+AP+ +HHQ N DH NSN ++A+ ++G G+
Sbjct: 1 MGMVGLRDVFLVAPA-----YHHQ-------NAGVISGSDHMNSN----AAAAAALGVGV 44
Query: 60 FPLLTATPCMPQQQSQNNEVQENPSNNNNFW-NLRMCPEVVNLPKKGVITEEENHGKIAM 118
PLLTA PQQ +++++ N NN W N E L K T + G +
Sbjct: 45 IPLLTAGT--PQQNVEDSDI--NFLGNNRRWQNNNNNHETQYLHFKS--TNQTTVGTSSN 98
Query: 119 MESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRRER 178
+G G+ CQDCGN+AKK+C RRCRTCCK RG+DCSTH+KSTW+ + RRRER
Sbjct: 99 NSGSGSGASGTA--TCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRER 156
Query: 179 EVEMFAGGGDGEG-----CSGVKRQKGLLGS--SQNAAATSHSSNSNGTTPKSFATSSCH 231
+V M G G SG K+ + ++GS Q ATSH+S SN T P+SF TSS
Sbjct: 157 QV-MPTGANPTAGSSLSTSSGTKKPR-IVGSQQQQQQQATSHTSTSN-TPPQSFETSSSR 213
Query: 232 Q 232
Q
Sbjct: 214 Q 214
>ref|NP_914676.1| putative LRP(lateral root primordia) 1 [Oryza sativa (japonica
cultivar-group)] gi|20161862|dbj|BAB90775.1| putative
LRP1 [Oryza sativa (japonica cultivar-group)]
gi|15528818|dbj|BAB64713.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 340
Score = 124 bits (311), Expect = 2e-27
Identities = 78/234 (33%), Positives = 117/234 (49%), Gaps = 33/234 (14%)
Query: 9 LVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPC 68
+V++ P+ S HH H H+ + ++A+ + IFPLL+A PC
Sbjct: 6 MVVVTPAASFHHTHHH--------------HHHHEAAAAAAAAAAAAADPIFPLLSAGPC 51
Query: 69 M--PQQQSQNNEVQENPSNNNNFWNLRMCPEVVNLPKKGVITEEEN-----HGKIAMMES 121
+ P + + + + FW + P++ + G + + M+++
Sbjct: 52 VLDPDKSAASGSAIQ-------FW--QPPPQLPSSAAGGNPNPSSSAFPYLKKPLPMLDT 102
Query: 122 EENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRRER-EV 180
CQDCGN+AKKDC +RCRTCCK RG+DCSTH+KSTW+P+ RRRER ++
Sbjct: 103 GGGSSGSGGAATCQDCGNQAKKDCGHQRCRTCCKSRGFDCSTHVKSTWVPAARRRERQQL 162
Query: 181 EMFAGGGDGEGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCHQGA 234
A + +K L +SQ TSH+S SN TTP+SF T+S HQ A
Sbjct: 163 TGSASSSPATASAAAASKKPRLLTSQ--TTTSHTSTSNATTPRSFDTTSSHQDA 214
>gb|AAV31329.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50511399|gb|AAT77322.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 453
Score = 116 bits (290), Expect = 6e-25
Identities = 59/117 (50%), Positives = 69/117 (58%), Gaps = 9/117 (7%)
Query: 125 GVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFA 184
G GS C DCGN+AKKDCV RCRTCCK RG+DC TH++STW+P+ RRRER + A
Sbjct: 223 GPGGSGAATCHDCGNQAKKDCVHHRCRTCCKSRGFDCPTHVRSTWVPAARRRER--QQLA 280
Query: 185 GGGDGEGCSG-------VKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCHQGA 234
G S +K L SQ TS +S SN TTP+SF TSS HQ A
Sbjct: 281 GAASSPPTSSAFPAATTASAKKPRLLGSQTTTTTSRTSTSNATTPRSFDTSSSHQVA 337
>emb|CAB80297.1| putative protein [Arabidopsis thaliana] gi|2961385|emb|CAA18132.1|
putative protein [Arabidopsis thaliana]
gi|15234365|ref|NP_195349.1| zinc finger protein-related
[Arabidopsis thaliana] gi|7486031|pir||T04595
hypothetical protein F23E13.150 - Arabidopsis thaliana
Length = 322
Score = 103 bits (256), Expect = 5e-21
Identities = 59/167 (35%), Positives = 87/167 (51%), Gaps = 22/167 (13%)
Query: 71 QQQSQNNEVQENPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMES------EEN 124
QQQ + N V + N N N +V +P + ++ +H + ++ + +
Sbjct: 22 QQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMHHHSHPQQQSLDLYPGHQIDVS 81
Query: 125 GVYGSEYRV---CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVE 181
+ S + C+DCGN+AKKDC RCRTCCK RG+DCSTH++STWIP RRRER+ +
Sbjct: 82 DLATSSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQ 141
Query: 182 MF---AGGGDGEGCSGV----------KRQKGLLGSSQNAAATSHSS 215
+ +GGG G G G R L G+S ++ SHS+
Sbjct: 142 LHMSTSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSA 188
>gb|AAX53173.1| putative zinc finger protein [Physcomitrella patens]
Length = 289
Score = 99.0 bits (245), Expect = 1e-19
Identities = 46/106 (43%), Positives = 66/106 (61%), Gaps = 1/106 (0%)
Query: 126 VYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFAG 185
V G CQ+CGN+AKKDC F+RCRTCCK R +DC+TH+KSTW+P+++RRER+ A
Sbjct: 67 VMGHGSTACQECGNQAKKDCSFQRCRTCCKSRDFDCATHVKSTWVPASKRRERQAAEAAA 126
Query: 186 GGDGEGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTPKSFATSSCH 231
G+ KR + L S A AT+ + ++ +P+ +S H
Sbjct: 127 AAAGQPRPKSKRAR-TLALSVPAGATTSMTTTSANSPRGSDINSGH 171
>gb|AAV68824.1| hypothetical protein AT1G19790 [Arabidopsis thaliana]
Length = 234
Score = 93.2 bits (230), Expect = 5e-18
Identities = 64/221 (28%), Positives = 97/221 (42%), Gaps = 27/221 (12%)
Query: 22 HHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQE 81
H++Q+ +Q ++ N+ S+++ + + + GF IFP P QQQ Q N
Sbjct: 12 HNKQDHHQEKDHNEDKSNNYLYLYK-DEIYNNNKGFEIFP-----PQYFQQQQQQNHA-- 63
Query: 82 NPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESEENGVYGSEYRV-----CQD 136
+ N ++ M P N+ ++ E + G CQD
Sbjct: 64 --AAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNCQD 121
Query: 137 CGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFA------------ 184
CGN+AKKDC RCRTCCK RG+DC TH+KSTW+ + +RRER+ ++
Sbjct: 122 CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPAKRIRDANSR 181
Query: 185 GGGDGEGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTPKSF 225
GGGD + + G A T + S+ SF
Sbjct: 182 GGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGMTMSF 222
>dbj|BAB10714.1| zinc finger protein SHI-like [Arabidopsis thaliana]
gi|15239350|ref|NP_201436.1| zinc finger protein,
putative (SHI) [Arabidopsis thaliana]
gi|4929803|gb|AAD34162.1| putative zinc finger protein
SHI [Arabidopsis thaliana]
Length = 331
Score = 93.2 bits (230), Expect = 5e-18
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 7/119 (5%)
Query: 110 EENHGKIAMMESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTW 169
E + G + MM S GS CQDCGN++KKDC RCRTCCK RG DC TH+KSTW
Sbjct: 100 ETSGGALMMMRSGS----GSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTW 155
Query: 170 IPSTRRREREVEMFAGGGDGE-GCSGVKRQKGLLGSSQNAAATSH--SSNSNGTTPKSF 225
+P+ +RRER+ ++ G + G S KRQ+ + + + A + S+N++G +F
Sbjct: 156 VPAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNF 214
>gb|AAV68856.1| hypothetical protein AT1G75520 [Arabidopsis thaliana]
gi|60547683|gb|AAX23805.1| hypothetical protein
At1g75520 [Arabidopsis thaliana]
gi|15222285|ref|NP_177684.1| lateral root primordium
(LRP) protein-related [Arabidopsis thaliana]
gi|25404980|pir||F96785 protein F10A5.26 [imported] -
Arabidopsis thaliana gi|9369370|gb|AAF87119.1| F10A5.26
[Arabidopsis thaliana]
Length = 346
Score = 92.0 bits (227), Expect = 1e-17
Identities = 58/175 (33%), Positives = 84/175 (47%), Gaps = 32/175 (18%)
Query: 26 NQNQNQNQNQPISHDHN----SNHSLPSSASL---SVGFGIFPLLTATPCMPQQQS--QN 76
N N N+ + + DH+ SN+ + + GF I+P P QQQ Q
Sbjct: 13 NSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWP-----PQYFQQQEHQQQ 67
Query: 77 NEVQENPSNNNNFWNLRMCPEVVNLPKKG---------VITEEENHGKIAMMESEENGVY 127
+ Q++ S NF++ M P + V+++ E G + N
Sbjct: 68 QQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTRQGGMN--- 124
Query: 128 GSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEM 182
CQDCGN+AKKDC RCRTCCK RG+ C TH+KSTW+P+ +RRER ++
Sbjct: 125 ------CQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQL 173
>gb|AAV68825.1| hypothetical protein AT1G19790 [Arabidopsis thaliana]
Length = 345
Score = 92.0 bits (227), Expect = 1e-17
Identities = 54/166 (32%), Positives = 83/166 (49%), Gaps = 15/166 (9%)
Query: 22 HHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQE 81
H++Q+ +Q ++ N+ S+++ + + + GF IFP P QQQ Q N
Sbjct: 12 HNKQDHHQEKDHNEDKSNNYLYLYK-DEIYNNNKGFEIFP-----PQYFQQQQQQNHA-- 63
Query: 82 NPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESEENGVYGSEYRV-----CQD 136
+ N ++ M P N+ ++ E + G CQD
Sbjct: 64 --AAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNCQD 121
Query: 137 CGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEM 182
CGN+AKKDC RCRTCCK RG+DC TH+KSTW+ + +RRER+ ++
Sbjct: 122 CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQL 167
>emb|CAB62628.1| putative protein [Arabidopsis thaliana]
gi|15230389|ref|NP_190675.1| zinc finger protein,
putative / lateral root primordium (LRP) protein-related
[Arabidopsis thaliana] gi|11357622|pir||T45737
hypothetical protein F24M12.100 - Arabidopsis thaliana
Length = 252
Score = 92.0 bits (227), Expect = 1e-17
Identities = 74/234 (31%), Positives = 104/234 (43%), Gaps = 36/234 (15%)
Query: 14 PSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVG-FGIFPLLTATPCMPQQ 72
P P S +N N N N N N N + PSS++ ++G ++ M Q
Sbjct: 31 PPPVSEAWLWYRNPNVNANANT------NVNANAPSSSNAALGTLELWQNHNQQEIMFQH 84
Query: 73 QSQNNEVQ---------ENPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESEE 123
Q + PSN+N F G + AMM
Sbjct: 85 QQHQQRLDLYSSAAGLGVGPSNHNQF------------DISGETSTAGAGRAAAMMMIRS 132
Query: 124 NGVYGSEYRV-CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEM 182
G G V CQDCGN+AKKDC RCRTCCK RG++CSTH++STW+P+ +RRER+ ++
Sbjct: 133 GGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQL 192
Query: 183 FAGGGDGE---GCSGVKR-QKGLLGSSQNAAAT---SHSSNSNGTTPKSFATSS 229
+ G S KR ++ L +S + T SHS G P ++S+
Sbjct: 193 ATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSA 246
>gb|AAX23751.1| hypothetical protein At1g19790 [Arabidopsis thaliana]
gi|15223669|ref|NP_173409.1| lateral root primordium
(LRP) protein-related [Arabidopsis thaliana]
gi|25518083|pir||A86331 F6F9.16 protein - Arabidopsis
thaliana gi|10086492|gb|AAG12552.1| Hypothetical Protein
[Arabidopsis thaliana]
Length = 345
Score = 92.0 bits (227), Expect = 1e-17
Identities = 54/166 (32%), Positives = 83/166 (49%), Gaps = 15/166 (9%)
Query: 22 HHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPLLTATPCMPQQQSQNNEVQE 81
H++Q+ +Q ++ N+ S+++ + + + GF IFP P QQQ Q N
Sbjct: 12 HNKQDHHQEKDHNEDKSNNYLYLYK-DEIYNNNKGFEIFP-----PQYFQQQQQQNHA-- 63
Query: 82 NPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESEENGVYGSEYRV-----CQD 136
+ N ++ M P N+ ++ E + G CQD
Sbjct: 64 --AAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMNCQD 121
Query: 137 CGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEM 182
CGN+AKKDC RCRTCCK RG+DC TH+KSTW+ + +RRER+ ++
Sbjct: 122 CGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQL 167
>ref|NP_198306.1| zinc finger protein-related [Arabidopsis thaliana]
Length = 173
Score = 90.5 bits (223), Expect = 3e-17
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 103 KKGVITEEENHG-KIAMMESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDC 161
K+G T + + AMM G GS CQD GN+AKKDC RCRTCCK RG++C
Sbjct: 20 KRGCATHPRSIAERAAMMMIRSGGSGGSGGVSCQDFGNQAKKDCSHMRCRTCCKSRGFEC 79
Query: 162 STHLKSTWIPSTRRREREVEM 182
STH++STW+P+T+RRER+ ++
Sbjct: 80 STHVRSTWVPATKRRERQQQL 100
>ref|XP_483648.1| putative lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)] gi|42408721|dbj|BAD09939.1| putative
lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)] gi|42407540|dbj|BAD10745.1| putative
lateral root primordia (LRP1) [Oryza sativa (japonica
cultivar-group)]
Length = 324
Score = 89.0 bits (219), Expect = 1e-16
Identities = 33/46 (71%), Positives = 41/46 (88%)
Query: 134 CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRRERE 179
CQDCGN+AKKDC RCRTCCK RG+DC+TH+KSTW+P+ +RRER+
Sbjct: 116 CQDCGNQAKKDCTHLRCRTCCKSRGFDCATHVKSTWVPAAKRRERQ 161
>dbj|BAD46263.1| putative LRP1 [Oryza sativa (japonica cultivar-group)]
gi|52075936|dbj|BAD46016.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 315
Score = 88.6 bits (218), Expect = 1e-16
Identities = 38/74 (51%), Positives = 49/74 (65%), Gaps = 8/74 (10%)
Query: 134 CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFA--------G 185
CQDCGN+AKKDC RCRTCCK RG+ C+TH+KSTW+P+ +RRER+ ++ A
Sbjct: 97 CQDCGNQAKKDCTHMRCRTCCKSRGFACATHVKSTWVPAAKRRERQQQLAALAASAAATA 156
Query: 186 GGDGEGCSGVKRQK 199
GG G KR +
Sbjct: 157 GGAGPSRDPTKRPR 170
>emb|CAB81808.1| putative protein [Arabidopsis thaliana] gi|17386152|gb|AAL38622.1|
AT3g54430/T12E18_120 [Arabidopsis thaliana]
gi|15450615|gb|AAK96579.1| AT3g54430/T12E18_120
[Arabidopsis thaliana] gi|15232522|ref|NP_191011.1|
lateral root primordium (LRP) protein-related
[Arabidopsis thaliana] gi|11357989|pir||T47602
hypothetical protein T12E18.120 - Arabidopsis thaliana
Length = 183
Score = 87.8 bits (216), Expect = 2e-16
Identities = 36/55 (65%), Positives = 44/55 (79%), Gaps = 2/55 (3%)
Query: 122 EENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRR 176
E+N G +VC+DCGNRAKK+C+F RCRTCCK RGY+C TH+KSTWIPS+ R
Sbjct: 31 EDNNTVGE--KVCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR 83
>dbj|BAD54563.1| putative LRP1 [Oryza sativa (japonica cultivar-group)]
gi|53792887|dbj|BAD54064.1| putative LRP1 [Oryza sativa
(japonica cultivar-group)]
Length = 384
Score = 85.9 bits (211), Expect = 9e-16
Identities = 32/51 (62%), Positives = 42/51 (81%)
Query: 134 CQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFA 184
CQDCGN AKKDC RCRTCC+ RG+ C+TH+KSTW+P+ +RRER+ ++ A
Sbjct: 133 CQDCGNNAKKDCSHLRCRTCCRSRGFSCATHVKSTWVPAAKRRERQQQLAA 183
>gb|AAD23685.1| hypothetical protein [Arabidopsis thaliana] gi|25412036|pir||G84600
hypothetical protein At2g21400 [imported] - Arabidopsis
thaliana gi|15226540|ref|NP_179735.1| lateral root
primordium (LRP) protein-related [Arabidopsis thaliana]
Length = 174
Score = 80.1 bits (196), Expect = 5e-14
Identities = 29/44 (65%), Positives = 37/44 (83%)
Query: 132 RVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRR 175
R C+DCGN+AKKDCV+ RCRTCCK + + C TH+KSTW+P+ RR
Sbjct: 7 RKCEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRR 50
>emb|CAE45586.1| hypothetical protein [Lotus corniculatus var. japonicus]
Length = 246
Score = 78.6 bits (192), Expect = 1e-13
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 5/66 (7%)
Query: 116 IAMMESEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRR 175
++MM +E V GS CQ+CGN+AKK C + RCRTCC +G+ C TH++STWIP RR
Sbjct: 1 MSMMLGQE--VKGSR---CQECGNQAKKGCAYSRCRTCCNNKGFQCQTHVRSTWIPVDRR 55
Query: 176 REREVE 181
R R +E
Sbjct: 56 RHRLME 61
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.128 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 439,450,315
Number of Sequences: 2540612
Number of extensions: 19880917
Number of successful extensions: 186193
Number of sequences better than 10.0: 767
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 604
Number of HSP's that attempted gapping in prelim test: 159816
Number of HSP's gapped (non-prelim): 10113
length of query: 235
length of database: 863,360,394
effective HSP length: 124
effective length of query: 111
effective length of database: 548,324,506
effective search space: 60864020166
effective search space used: 60864020166
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)
Medicago: description of AC146853.5