BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.12 + phase: 0 /pseudo
(1226 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum] 226 5e-57
dbj|BAB92011.1| pleiotropic drug resistance like protein [Nicoti... 226 5e-57
emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 214 2e-53
gi|28144321 TPA: PDR12 ABC transporter [Arabidopsis thaliana] gi... 211 2e-52
gb|AAQ01165.1| putative ATPase [Oryza sativa (japonica cultivar-... 207 2e-51
ref|NP_917619.1| putative ABC transporter protein [Oryza sativa ... 207 2e-51
emb|CAD59569.1| PDR-like ABC transporter [Oryza sativa (japonica... 207 2e-51
emb|CAA94437.1| PDR5-like ABC transporter [Spirodela polyrhiza] 205 7e-51
ref|XP_464576.1| PDR-like ABC transporter [Oryza sativa (japonic... 200 2e-49
ref|NP_917613.1| putative ABC transporter protein [Oryza sativa ... 194 2e-47
emb|CAD59567.1| PDR-like ABC transporter [Oryza sativa (japonica... 194 2e-47
gi|28144341 TPA: PDR1 ABC transporter [Oryza sativa (japonica cu... 194 2e-47
dbj|BAD29206.1| PDR-type ABC transporter-like [Oryza sativa (jap... 194 2e-47
gb|AAQ02685.1| PDR-type ABC transporter 9 [Oryza sativa (indica ... 193 3e-47
ref|NP_917616.1| putative ABC transporter protein [Oryza sativa ... 193 3e-47
ref|NP_917615.1| putative ABC transporter protein [Oryza sativa ... 193 3e-47
emb|CAD59568.1| PDR-like ABC transporter [Oryza sativa (japonica... 193 3e-47
emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa (japonica... 193 3e-47
ref|XP_550325.1| putative PDR-like ABC transporter [Oryza sativa... 181 1e-43
emb|CAD59571.1| PDR-like ABC transporter [Oryza sativa (japonica... 181 1e-43
>dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum]
Length = 1434
Score = 226 bits (575), Expect = 5e-57
Identities = 117/219 (53%), Positives = 160/219 (72%), Gaps = 20/219 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
+ D+ +KW ++++LPT RLR+GLL +G + E+D++ +G QER LL+RL++ V
Sbjct: 44 DEDDEEALKWAALEKLPTFDRLRKGLLFGSQGAAAEVDINDLGFQERKNLLERLVK---V 100
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVE- 120
+++ FLLKL ++RIDR G+D+PTIEVR+EHLN+ A +VG R+L T N+M + VE
Sbjct: 101 ADEDNEKFLLKL-KNRIDRVGIDLPTIEVRYEHLNIDADAYVGSRSLPTFMNFMTNFVET 159
Query: 121 -----YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+IL RK+QL IL+D+SGI+K R+TLLLGPP+SGKT LLLALAGKLDP LK+
Sbjct: 160 LLNSLHILSSRKRQLTILKDISGIIKPCRMTLLLGPPSSGKTTLLLALAGKLDPALKV-- 217
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
GKVSYNGHE++EFVPQRTAAY+SQ+D H+G
Sbjct: 218 --------TGKVSYNGHELHEFVPQRTAAYISQHDLHIG 248
Score = 38.1 bits (87), Expect = 1.8
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K + G+
Sbjct: 859 EDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYID------GE 907
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+ +G+ + R + Y QND H
Sbjct: 908 IKISGYPKKQETFARISGYCEQNDIH 933
>dbj|BAB92011.1| pleiotropic drug resistance like protein [Nicotiana tabacum]
Length = 1434
Score = 226 bits (575), Expect = 5e-57
Identities = 117/219 (53%), Positives = 160/219 (72%), Gaps = 20/219 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
+ D+ +KW ++++LPT RLR+GLL +G + E+D++ +G QER LL+RL++ V
Sbjct: 44 DEDDEEALKWAALEKLPTFDRLRKGLLFGSQGAAAEVDINDLGFQERKNLLERLVK---V 100
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVE- 120
+++ FLLKL ++RIDR G+D+PTIEVR+EHLN+ A +VG R+L T N+M + VE
Sbjct: 101 ADEDNEKFLLKL-KNRIDRVGIDLPTIEVRYEHLNIDADAYVGSRSLPTFMNFMTNFVET 159
Query: 121 -----YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+IL RK+QL IL+D+SGI+K R+TLLLGPP+SGKT LLLALAGKLDP LK+
Sbjct: 160 LLNSLHILSSRKRQLTILKDISGIIKPCRMTLLLGPPSSGKTTLLLALAGKLDPALKV-- 217
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
GKVSYNGHE++EFVPQRTAAY+SQ+D H+G
Sbjct: 218 --------TGKVSYNGHELHEFVPQRTAAYISQHDLHIG 248
Score = 38.1 bits (87), Expect = 1.8
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K + G+
Sbjct: 859 EDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYID------GE 907
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+ +G+ + R + Y QND H
Sbjct: 908 IKISGYPKKQETFARISGYCEQNDIH 933
>emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia]
Length = 1436
Score = 214 bits (544), Expect = 2e-53
Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 20/219 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
+ D+ +KW ++++LPT RLR+G+L +G + E+DV G+ ER LL+RL++ V
Sbjct: 48 DEDDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVDVDDSGVLERKNLLERLVK---V 104
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVE- 120
+++ FLLKL ++RIDR G+D P+IEVRFEHLN+ A +VG RAL T TN++ + VE
Sbjct: 105 ADEDNEKFLLKL-KNRIDRVGIDFPSIEVRFEHLNIDADAYVGSRALPTFTNFISNFVEG 163
Query: 121 -----YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+IL +K+Q+ IL+DVSGI+K R+TLLLGPP SGKT LLLALAGKLD LK+
Sbjct: 164 LLDSIHILPSKKRQVTILKDVSGIVKPCRMTLLLGPPGSGKTTLLLALAGKLDSALKV-- 221
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
GKV+YNGHE++EFVPQRTAAY+SQ+D H+G
Sbjct: 222 --------TGKVTYNGHELHEFVPQRTAAYISQHDLHIG 252
Score = 37.7 bits (86), Expect = 2.4
Identities = 25/84 (29%), Positives = 39/84 (45%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+ VSG + LT L+G +GKT L+ LAG+ K + G +
Sbjct: 862 RLVLLKSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYID------GSIK 910
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G+ + R + Y QND H
Sbjct: 911 ISGYPKKQDTFARISGYCEQNDIH 934
>gi|28144321 TPA: PDR12 ABC transporter [Arabidopsis thaliana]
gi|8072390|gb|AAF71978.1| Putative ABC transporter
[Arabidopsis thaliana] gi|15218218|ref|NP_173005.1| ABC
transporter family protein [Arabidopsis thaliana]
gi|25384578|pir||A86289 probable ABC transporter
[imported] - Arabidopsis thaliana
Length = 1423
Score = 211 bits (536), Expect = 2e-52
Identities = 111/236 (47%), Positives = 155/236 (65%), Gaps = 22/236 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPE--GDSNEIDVHKIGLQERTYLLQRLLRNN 59
E D+ ++W ++++LPT RLR+G+LT G NEID+ K+G Q+ LL+RL++
Sbjct: 35 EEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPINEIDIQKLGFQDTKKLLERLIKVG 94
Query: 60 TVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLV 119
D++H LL ++ RIDR G+D+PTIEVRF+HL V+A+VHVG RAL T N++ +
Sbjct: 95 ----DDEHEKLLWKLKKRIDRVGIDLPTIEVRFDHLKVEAEVHVGGRALPTFVNFISNFA 150
Query: 120 E------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKI 173
+ +++ RK++ IL DVSGI+K R+ LLLGPP+SGKT LLLALAGKLD LK
Sbjct: 151 DKFLNTLHLVPNRKKKFTILNDVSGIVKPGRMALLLGPPSSGKTTLLLALAGKLDQELK- 209
Query: 174 ANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLGN*LSEKPWPFQQEFK 229
G+V+YNGH MNEFVPQRTAAY+ QND H+G + + + F+
Sbjct: 210 ---------QTGRVTYNGHGMNEFVPQRTAAYIGQNDVHIGEMTVRETFAYAARFQ 256
Score = 39.7 bits (91), Expect = 0.63
Identities = 27/101 (26%), Positives = 50/101 (48%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKRRKQQ--LNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ + ++++ Q+ L +L+ V+G + LT L+G +GKT L+ LAG+
Sbjct: 832 YSVDMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGR----- 886
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K + G ++ +G+ N+ R + Y Q D H
Sbjct: 887 KTGGYID------GNITISGYPKNQQTFARISGYCEQTDIH 921
>gb|AAQ01165.1| putative ATPase [Oryza sativa (japonica cultivar-group)]
gi|34895032|ref|NP_908841.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
gi|21104703|dbj|BAB93292.1| putative ABC1 protein [Oryza
sativa (japonica cultivar-group)]
Length = 1451
Score = 207 bits (527), Expect = 2e-51
Identities = 110/222 (49%), Positives = 151/222 (67%), Gaps = 23/222 (10%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTP---EGDSNEIDVHKIGLQERTYLLQRLLRN 58
E D+ ++W +++RLPT R+RRG+L G+ E+DV ++G +E L+ RL+R
Sbjct: 42 EEDDEEALRWAALERLPTRDRVRRGILLQAAEGNGEKVEVDVGRMGARESRALIARLIR- 100
Query: 59 NTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDL 118
D+DH+ L ++DR+DR G+D PTIEVRFE L V+A+VHVG R L T+ N +++
Sbjct: 101 ---AADDDHALFLLKLKDRMDRVGIDYPTIEVRFEKLEVEAEVHVGNRGLPTLLNSIINT 157
Query: 119 VE------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLK 172
V+ +I RKQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAGKL+ NLK
Sbjct: 158 VQAIGNALHISPTRKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLEDNLK 217
Query: 173 IANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+ +GKV+YNGH M+EFVPQRTAAY+SQ+D H+G
Sbjct: 218 V----------SGKVTYNGHGMDEFVPQRTAAYISQHDLHIG 249
Score = 39.7 bits (91), Expect = 0.63
Identities = 28/101 (27%), Positives = 50/101 (48%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKR--RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ E + + +++L +L+ VSG + LT L+G +GKT L+ LAG+
Sbjct: 860 YSVDMPEAMTAQGVTEERLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR----- 914
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G ++ +G+ + R + Y QND H
Sbjct: 915 KTGGYIE------GDITISGYPKKQETFARISGYCEQNDIH 949
>ref|NP_917619.1| putative ABC transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 1417
Score = 207 bits (526), Expect = 2e-51
Identities = 110/225 (48%), Positives = 151/225 (66%), Gaps = 26/225 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPE------GDSNEIDVHKIGLQERTYLLQRL 55
E D+ ++W +++RLPT R+RRG+L G+ E+DV ++G +E L++RL
Sbjct: 28 EDDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERL 87
Query: 56 LRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYM 115
+R D+DH L +R+R+DR G+D PTIEVRFE+L V+A VHVG R L T+ N +
Sbjct: 88 VR----AADDDHERFLLKLRERMDRVGIDYPTIEVRFENLEVEADVHVGNRGLPTLLNSV 143
Query: 116 LDLVE------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDP 169
+ VE +IL +KQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAGKLD
Sbjct: 144 TNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDK 203
Query: 170 NLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+LK+ +GKV+YNGH M+EFVP+RTAAY+SQ+D H+G
Sbjct: 204 DLKV----------SGKVTYNGHGMHEFVPERTAAYISQHDLHIG 238
Score = 37.7 bits (86), Expect = 2.4
Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKR--RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ E + + + +L +L+ VSG + LT L+G +GKT L+ LAG+
Sbjct: 826 YSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR----- 880
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G + +G+ + R + Y QND H
Sbjct: 881 KTGGYIE------GDIRISGYPKKQETFARISGYCEQNDIH 915
>emb|CAD59569.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|28144319|tpg|DAA00887.1| TPA: PDR4 ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 1450
Score = 207 bits (526), Expect = 2e-51
Identities = 110/225 (48%), Positives = 151/225 (66%), Gaps = 26/225 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPE------GDSNEIDVHKIGLQERTYLLQRL 55
E D+ ++W +++RLPT R+RRG+L G+ E+DV ++G +E L++RL
Sbjct: 35 EDDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERL 94
Query: 56 LRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYM 115
+R D+DH L +R+R+DR G+D PTIEVRFE+L V+A VHVG R L T+ N +
Sbjct: 95 VR----AADDDHERFLLKLRERMDRVGIDYPTIEVRFENLEVEADVHVGNRGLPTLLNSV 150
Query: 116 LDLVE------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDP 169
+ VE +IL +KQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAGKLD
Sbjct: 151 TNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDK 210
Query: 170 NLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+LK+ +GKV+YNGH M+EFVP+RTAAY+SQ+D H+G
Sbjct: 211 DLKV----------SGKVTYNGHGMHEFVPERTAAYISQHDLHIG 245
Score = 37.7 bits (86), Expect = 2.4
Identities = 28/101 (27%), Positives = 48/101 (46%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKR--RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ E + + + +L +L+ VSG + LT L+G +GKT L+ LAG+
Sbjct: 859 YSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR----- 913
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G + +G+ + R + Y QND H
Sbjct: 914 KTGGYIE------GDIRISGYPKKQETFARISGYCEQNDIH 948
>emb|CAA94437.1| PDR5-like ABC transporter [Spirodela polyrhiza]
Length = 1441
Score = 205 bits (522), Expect = 7e-51
Identities = 109/219 (49%), Positives = 151/219 (68%), Gaps = 20/219 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
E D+ +KW ++++LPT RLR+G++T G+ E+D+ +G QER LL++L+RN
Sbjct: 41 EEDDEEALKWAALEKLPTYDRLRKGIMTGDGGEIQEVDIQGLGFQERKNLLEKLVRN--A 98
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVEY 121
E DN+ FLLKL R+R++R G+D PTIEVRFEHLN+ A+ VG R + T+ N+ ++ +
Sbjct: 99 EEDNER-FLLKL-RNRMERVGIDNPTIEVRFEHLNINAEAFVGNRGVPTLVNFFVNKAIW 156
Query: 122 ILKRR------KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
IL K+ ++IL DVSGI+K R+TLLLGPP +GKT LLLALAGKLD LK+
Sbjct: 157 ILSALHLMPSGKRPISILHDVSGIIKPCRMTLLLGPPGAGKTTLLLALAGKLDNTLKV-- 214
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
G V+YNGH M+EFVPQRT+AY+SQ+D H+G
Sbjct: 215 --------TGNVTYNGHGMHEFVPQRTSAYISQHDVHIG 245
Score = 40.0 bits (92), Expect = 0.49
Identities = 29/101 (28%), Positives = 48/101 (46%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKR--RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ + + R + +L +L+ VSG + LT L+G GKT L+ LAG+
Sbjct: 850 YSVDMPQEMKDRGVTEDKLLLLKGVSGAFRPGVLTALMGVSGRGKTTLMDVLAGR----- 904
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G + +G+ N+ R + Y QND H
Sbjct: 905 KTGGYIE------GDIRISGYPKNQETFARISGYCEQNDIH 939
>ref|XP_464576.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|27368825|emb|CAD59570.1| PDR-like ABC transporter
[Oryza sativa (japonica cultivar-group)]
gi|49387907|dbj|BAD25007.1| PDR-like ABC transporter
[Oryza sativa (japonica cultivar-group)]
gi|49387895|dbj|BAD24998.1| PDR-like ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 1444
Score = 200 bits (509), Expect = 2e-49
Identities = 107/219 (48%), Positives = 153/219 (69%), Gaps = 22/219 (10%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
E D+ +KW +I++LPT R+R+G+LT G E+D+ +GLQER L++RL+R T
Sbjct: 39 EEDDEEALKWAAIEKLPTYDRMRKGILTA--GGVEEVDIGGLGLQERRNLIERLVR--TA 94
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVEY 121
E DN+ FLLKL RDR++R G+D PTIEVRFE+L++ A+ +VG R + T TN+ + +
Sbjct: 95 EEDNER-FLLKL-RDRMERVGIDNPTIEVRFENLSIDAEAYVGNRGIPTFTNFFSNKIMD 152
Query: 122 ILKRR------KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+L K+ ++IL D+SGI++ R++LLLGPP SGKT LLLALAGKLD LK+
Sbjct: 153 VLSAMRIVSSGKRPISILHDISGIIRPGRMSLLLGPPGSGKTSLLLALAGKLDSTLKV-- 210
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+G+V+YNGH+M+EFVPQRT+AY+ Q+D H+G
Sbjct: 211 --------SGRVTYNGHDMDEFVPQRTSAYIGQHDLHIG 241
Score = 40.8 bits (94), Expect = 0.28
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 868 EDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GD 916
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+S +G+ + R A Y QND H
Sbjct: 917 ISISGYPKKQETFARIAGYCEQNDIH 942
>ref|NP_917613.1| putative ABC transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 1450
Score = 194 bits (493), Expect = 2e-47
Identities = 110/230 (47%), Positives = 149/230 (63%), Gaps = 32/230 (13%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNE-----------IDVHKIGLQERTY 50
E D+ ++W ++Q+LPT R+R +L EG+ E +DVH +G ER
Sbjct: 42 EEDDEEALRWAALQKLPTYDRVRAAILPMVEGEGGEAGGGGGGRRVVVDVHSLGPHERRA 101
Query: 51 LLQRLLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHT 110
LL+RL+R V D++ FLLKL ++RI R G+D+PTIEVRFEHL V+A+V VG + T
Sbjct: 102 LLERLVR---VADDDNERFLLKL-KERISRVGIDMPTIEVRFEHLEVEAEVRVGNSGIPT 157
Query: 111 ITNYMLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALA 164
+ N + + +E IL RKQ L IL D+SGI+K R+TLLLGPP SGKT LLALA
Sbjct: 158 VLNSITNKIEEAANALGILPTRKQTLRILHDISGIIKPKRMTLLLGPPGSGKTTFLLALA 217
Query: 165 GKLDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
G+L +LK F+G+V+YNGH+M +FVPQRTAAY+SQ+D H+G
Sbjct: 218 GRL-KDLK----------FSGQVTYNGHQMEDFVPQRTAAYISQHDLHIG 256
Score = 41.6 bits (96), Expect = 0.17
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 875 EDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GN 923
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+S +G+ + R + Y QND H
Sbjct: 924 ISISGYPKKQETFARVSGYCEQNDIH 949
>emb|CAD59567.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1479
Score = 194 bits (493), Expect = 2e-47
Identities = 110/230 (47%), Positives = 149/230 (63%), Gaps = 32/230 (13%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNE-----------IDVHKIGLQERTY 50
E D+ ++W ++Q+LPT R+R +L EG+ E +DVH +G ER
Sbjct: 50 EEDDEEALRWAALQKLPTYDRVRAAILPMVEGEGGEAGGGGGGRRVVVDVHSLGPHERRA 109
Query: 51 LLQRLLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHT 110
LL+RL+R V D++ FLLKL ++RI R G+D+PTIEVRFEHL V+A+V VG + T
Sbjct: 110 LLERLVR---VADDDNERFLLKL-KERISRVGIDMPTIEVRFEHLEVEAEVRVGNSGIPT 165
Query: 111 ITNYMLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALA 164
+ N + + +E IL RKQ L IL D+SGI+K R+TLLLGPP SGKT LLALA
Sbjct: 166 VLNSITNKIEEAANALGILPTRKQTLRILHDISGIIKPKRMTLLLGPPGSGKTTFLLALA 225
Query: 165 GKLDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
G+L +LK F+G+V+YNGH+M +FVPQRTAAY+SQ+D H+G
Sbjct: 226 GRL-KDLK----------FSGQVTYNGHQMEDFVPQRTAAYISQHDLHIG 264
Score = 41.6 bits (96), Expect = 0.17
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 893 EDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GN 941
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+S +G+ + R + Y QND H
Sbjct: 942 ISISGYPKKQETFARVSGYCEQNDIH 967
>gi|28144341 TPA: PDR1 ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1468
Score = 194 bits (493), Expect = 2e-47
Identities = 110/230 (47%), Positives = 149/230 (63%), Gaps = 32/230 (13%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNE-----------IDVHKIGLQERTY 50
E D+ ++W ++Q+LPT R+R +L EG+ E +DVH +G ER
Sbjct: 50 EEDDEEALRWAALQKLPTYDRVRAAILPMVEGEGGEAGGGGGGRRVVVDVHSLGPHERRA 109
Query: 51 LLQRLLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHT 110
LL+RL+R V D++ FLLKL ++RI R G+D+PTIEVRFEHL V+A+V VG + T
Sbjct: 110 LLERLVR---VADDDNERFLLKL-KERISRVGIDMPTIEVRFEHLEVEAEVRVGNSGIPT 165
Query: 111 ITNYMLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALA 164
+ N + + +E IL RKQ L IL D+SGI+K R+TLLLGPP SGKT LLALA
Sbjct: 166 VLNSITNKIEEAANALGILPTRKQTLRILHDISGIIKPKRMTLLLGPPGSGKTTFLLALA 225
Query: 165 GKLDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
G+L +LK F+G+V+YNGH+M +FVPQRTAAY+SQ+D H+G
Sbjct: 226 GRL-KDLK----------FSGQVTYNGHQMEDFVPQRTAAYISQHDLHIG 264
Score = 41.6 bits (96), Expect = 0.17
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 893 EDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GN 941
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
+S +G+ + R + Y QND H
Sbjct: 942 ISISGYPKKQETFARVSGYCEQNDIH 967
>dbj|BAD29206.1| PDR-type ABC transporter-like [Oryza sativa (japonica
cultivar-group)] gi|50252908|dbj|BAD29138.1| PDR-type
ABC transporter-like [Oryza sativa (japonica
cultivar-group)]
Length = 635
Score = 194 bits (493), Expect = 2e-47
Identities = 100/219 (45%), Positives = 148/219 (66%), Gaps = 21/219 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
+ D+ ++W ++++LPT R R +L PEG+ E++V ++G QER LLQRL
Sbjct: 37 DEDDEEALRWAALEKLPTYDRARTAVLAMPEGELREVNVQRLGPQERHALLQRL-----A 91
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVE- 120
V +DH+ L +DR+DR G+++PTIEVR+E+LNV+A+ +VG R L TI N +++E
Sbjct: 92 WVGDDHARFLSKFKDRVDRVGIELPTIEVRYENLNVEAEAYVGSRGLPTILNTYANVLEG 151
Query: 121 -----YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+I RKQ+++IL +VSGI+K R+TLLLGPP +GKT LLLALAG + LK+
Sbjct: 152 LANTLHITPNRKQKISILHNVSGIIKPHRMTLLLGPPGAGKTTLLLALAGNVPSGLKV-- 209
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+G+++YNGH M+EF P+R+AAYVSQ+D H+G
Sbjct: 210 --------SGQITYNGHTMDEFEPRRSAAYVSQHDLHMG 240
>gb|AAQ02685.1| PDR-type ABC transporter 9 [Oryza sativa (indica cultivar-group)]
Length = 1457
Score = 193 bits (490), Expect = 3e-47
Identities = 108/226 (47%), Positives = 147/226 (64%), Gaps = 27/226 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTT-------PEGDSNEIDVHKIGLQERTYLLQR 54
E D+ ++W ++++LPT R+RR +L G +DVH +G +ER LL+R
Sbjct: 40 EEDDEEALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLER 99
Query: 55 LLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNY 114
L+R V +++ FLLKL +DR+DR G+D+PTIEVRFEHL +A+V VG L T+ N
Sbjct: 100 LVR---VADEDNEKFLLKL-KDRVDRVGIDMPTIEVRFEHLEAEAEVRVGNSGLPTVLNS 155
Query: 115 MLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLD 168
+ + +E IL RKQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAG+L
Sbjct: 156 ITNTLEEAGNALGILPNRKQTMPVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLG 215
Query: 169 PNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+LK +GKV+YNGH M EFVP+RTAAY+SQ+D H+G
Sbjct: 216 KDLKA----------SGKVTYNGHGMEEFVPERTAAYISQHDLHIG 251
Score = 39.7 bits (91), Expect = 0.63
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G ++
Sbjct: 884 RLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GSIN 932
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G+ + R + Y QND H
Sbjct: 933 ISGYPKKQETFARVSGYCEQNDIH 956
>ref|NP_917616.1| putative ABC transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 1432
Score = 193 bits (490), Expect = 3e-47
Identities = 108/226 (47%), Positives = 147/226 (64%), Gaps = 27/226 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTT-------PEGDSNEIDVHKIGLQERTYLLQR 54
E D+ ++W ++++LPT R+RR +L G +DVH +G +ER LL+R
Sbjct: 40 EEDDEEALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLER 99
Query: 55 LLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNY 114
L+R V +++ FLLKL +DR+DR G+D+PTIEVRFEHL +A+V VG L T+ N
Sbjct: 100 LVR---VADEDNEKFLLKL-KDRVDRVGIDMPTIEVRFEHLEAEAEVRVGNSGLPTVLNS 155
Query: 115 MLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLD 168
+ + +E IL RKQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAG+L
Sbjct: 156 ITNTLEEAGNALGILPNRKQTMPVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLG 215
Query: 169 PNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+LK +GKV+YNGH M EFVP+RTAAY+SQ+D H+G
Sbjct: 216 KDLKA----------SGKVTYNGHGMEEFVPERTAAYISQHDLHIG 251
Score = 39.7 bits (91), Expect = 0.63
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G ++
Sbjct: 859 RLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GSIN 907
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G+ + R + Y QND H
Sbjct: 908 ISGYPKKQETFARVSGYCEQNDIH 931
>ref|NP_917615.1| putative ABC transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 1447
Score = 193 bits (490), Expect = 3e-47
Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 27/224 (12%)
Query: 4 DEISLMKWDSIQRLPTVARLRRGLLTTPE-----GDSNE--IDVHKIGLQERTYLLQRLL 56
D+ ++W ++++LPT R+RR +L E G++ + +DV +G QER LL+RL+
Sbjct: 45 DDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGGGEAGKKVVDVLSLGPQERRALLERLV 104
Query: 57 RNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYML 116
R V D++ FLLKL ++RIDR G+DIPTIEVRFEHL +A+V VG L T+ N M
Sbjct: 105 R---VAEDDNERFLLKL-KERIDRVGIDIPTIEVRFEHLEAEAEVRVGNSGLPTVLNSMT 160
Query: 117 DLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
+ +E IL +KQ + IL DVSGI+K R+TLLLGPP SGKT LLLALAG+L +
Sbjct: 161 NKLEGAANALGILPNKKQTMPILHDVSGIVKPRRMTLLLGPPGSGKTTLLLALAGRLGKD 220
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+K F+G+V+YNGH+M +FVPQRTAAY+SQ+D H+G
Sbjct: 221 IK----------FSGQVTYNGHQMEDFVPQRTAAYISQHDLHIG 254
Score = 40.0 bits (92), Expect = 0.49
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 872 EDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GN 920
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
++ +G+ + R + Y QND H
Sbjct: 921 ITISGYPKKQETFARVSGYCEQNDIH 946
>emb|CAD59568.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|28144343|tpg|DAA00886.1| TPA: PDR3 ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 1457
Score = 193 bits (490), Expect = 3e-47
Identities = 108/226 (47%), Positives = 147/226 (64%), Gaps = 27/226 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTT-------PEGDSNEIDVHKIGLQERTYLLQR 54
E D+ ++W ++++LPT R+RR +L G +DVH +G +ER LL+R
Sbjct: 40 EEDDEEALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLER 99
Query: 55 LLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNY 114
L+R V +++ FLLKL +DR+DR G+D+PTIEVRFEHL +A+V VG L T+ N
Sbjct: 100 LVR---VADEDNEKFLLKL-KDRVDRVGIDMPTIEVRFEHLEAEAEVRVGNSGLPTVLNS 155
Query: 115 MLDLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLD 168
+ + +E IL RKQ + +L DVSGI+K R+TLLLGPP SGKT LLLALAG+L
Sbjct: 156 ITNTLEEAGNALGILPNRKQTMPVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLG 215
Query: 169 PNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+LK +GKV+YNGH M EFVP+RTAAY+SQ+D H+G
Sbjct: 216 KDLKA----------SGKVTYNGHGMEEFVPERTAAYISQHDLHIG 251
Score = 39.7 bits (91), Expect = 0.63
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G ++
Sbjct: 884 RLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GSIN 932
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G+ + R + Y QND H
Sbjct: 933 ISGYPKKQETFARVSGYCEQNDIH 956
>emb|CAD59566.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|28144345|tpg|DAA00885.1| TPA: PDR2 ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 1464
Score = 193 bits (490), Expect = 3e-47
Identities = 110/224 (49%), Positives = 151/224 (67%), Gaps = 27/224 (12%)
Query: 4 DEISLMKWDSIQRLPTVARLRRGLLTTPE-----GDSNE--IDVHKIGLQERTYLLQRLL 56
D+ ++W ++++LPT R+RR +L E G++ + +DV +G QER LL+RL+
Sbjct: 51 DDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGGGEAGKKVVDVLSLGPQERRALLERLV 110
Query: 57 RNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYML 116
R V D++ FLLKL ++RIDR G+DIPTIEVRFEHL +A+V VG L T+ N M
Sbjct: 111 R---VAEDDNERFLLKL-KERIDRVGIDIPTIEVRFEHLEAEAEVRVGNSGLPTVLNSMT 166
Query: 117 DLVEY------ILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
+ +E IL +KQ + IL DVSGI+K R+TLLLGPP SGKT LLLALAG+L +
Sbjct: 167 NKLEGAANALGILPNKKQTMPILHDVSGIVKPRRMTLLLGPPGSGKTTLLLALAGRLGKD 226
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+K F+G+V+YNGH+M +FVPQRTAAY+SQ+D H+G
Sbjct: 227 IK----------FSGQVTYNGHQMEDFVPQRTAAYISQHDLHIG 260
Score = 40.0 bits (92), Expect = 0.49
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGK 186
+ +L +L+ VSG + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 889 EDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GN 937
Query: 187 VSYNGHEMNEFVPQRTAAYVSQNDTH 212
++ +G+ + R + Y QND H
Sbjct: 938 ITISGYPKKQETFARVSGYCEQNDIH 963
>ref|XP_550325.1| putative PDR-like ABC transporter [Oryza sativa (japonica
cultivar-group)]
Length = 1399
Score = 181 bits (459), Expect = 1e-43
Identities = 105/226 (46%), Positives = 141/226 (61%), Gaps = 30/226 (13%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTP-------EGDSN--EIDVHKIGLQERTYLL 52
E DE ++W ++QRLPTVAR RRGLL +P +GD E+DV + +RT L+
Sbjct: 17 EEDEQEALRWAALQRLPTVARARRGLLRSPAPGEDRVQGDDALCEVDVAGLSPGDRTALV 76
Query: 53 QRLLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTIT 112
RLL ++ D + +R R D ++ P IEVR+E L V A VHVG RAL TI
Sbjct: 77 DRLLADS-----GDVEDFFRRIRSRFDAVQIEFPKIEVRYEDLTVDAYVHVGSRALPTIP 131
Query: 113 NYMLDLVEYILKRRK------QQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGK 166
N++ ++ E L+ + +L IL +VSGI++ SR+TLLLGPP+SGKT LLLALAG+
Sbjct: 132 NFICNMTEAFLRHLRIYRGGRVKLPILDNVSGIIRPSRMTLLLGPPSSGKTTLLLALAGR 191
Query: 167 LDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
L P LK+ +G ++YNGH +NEFVPQRT+AYVSQ D H
Sbjct: 192 LGPGLKV----------SGNITYNGHHLNEFVPQRTSAYVSQQDWH 227
Score = 43.5 bits (101), Expect = 0.044
Identities = 29/102 (28%), Positives = 48/102 (46%), Gaps = 13/102 (12%)
Query: 113 NYMLDLVEYILKRR--KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
NY +D+ + + + +L +L DV+G + LT L+G +GKT L+ LAG+
Sbjct: 857 NYYVDVPAELKSQGIVEDRLQLLIDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGG 916
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
L G ++ +G+ N+ R + Y QND H
Sbjct: 917 L-----------IEGSITISGYPKNQETFTRISGYCEQNDVH 947
>emb|CAD59571.1| PDR-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1336
Score = 181 bits (459), Expect = 1e-43
Identities = 105/226 (46%), Positives = 141/226 (61%), Gaps = 30/226 (13%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTP-------EGDSN--EIDVHKIGLQERTYLL 52
E DE ++W ++QRLPTVAR RRGLL +P +GD E+DV + +RT L+
Sbjct: 17 EEDEQEALRWAALQRLPTVARARRGLLRSPAPGEDRVQGDDALCEVDVAGLSPGDRTALV 76
Query: 53 QRLLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTIT 112
RLL ++ D + +R R D ++ P IEVR+E L V A VHVG RAL TI
Sbjct: 77 DRLLADS-----GDVEDFFRRIRSRFDAVQIEFPKIEVRYEDLTVDAYVHVGSRALPTIP 131
Query: 113 NYMLDLVEYILKRRK------QQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGK 166
N++ ++ E L+ + +L IL +VSGI++ SR+TLLLGPP+SGKT LLLALAG+
Sbjct: 132 NFICNMTEAFLRHLRIYRGGRVKLPILDNVSGIIRPSRMTLLLGPPSSGKTTLLLALAGR 191
Query: 167 LDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
L P LK+ +G ++YNGH +NEFVPQRT+AYVSQ D H
Sbjct: 192 LGPGLKV----------SGNITYNGHHLNEFVPQRTSAYVSQQDWH 227
Score = 43.5 bits (101), Expect = 0.044
Identities = 29/102 (28%), Positives = 48/102 (46%), Gaps = 13/102 (12%)
Query: 113 NYMLDLVEYILKRR--KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
NY +D+ + + + +L +L DV+G + LT L+G +GKT L+ LAG+
Sbjct: 830 NYYVDVPAELKSQGIVEDRLQLLIDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGG 889
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
L G ++ +G+ N+ R + Y QND H
Sbjct: 890 L-----------IEGSITISGYPKNQETFTRISGYCEQNDVH 920
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.352 0.155 0.576
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,810,968,888
Number of Sequences: 2540612
Number of extensions: 67650593
Number of successful extensions: 323895
Number of sequences better than 10.0: 533
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 322874
Number of HSP's gapped (non-prelim): 903
length of query: 1226
length of database: 863,360,394
effective HSP length: 140
effective length of query: 1086
effective length of database: 507,674,714
effective search space: 551334739404
effective search space used: 551334739404
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 81 (35.8 bits)
Medicago: description of AC146819.12