BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146792.8 - phase: 0
(266 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64857.1| putative membrane associated protein [Arabidopsis... 363 3e-99
gb|AAN28781.1| At4g05060/T32N4_12 [Arabidopsis thaliana] gi|2045... 340 2e-92
gb|AAM65052.1| membrane associated protein-like protein [Arabido... 338 9e-92
emb|CAB81252.1| putative membrane associated protein [Arabidopsi... 335 6e-91
ref|XP_478696.1| putative 27k vesicle-associated membrane protei... 325 8e-88
ref|NP_568804.1| vesicle-associated membrane family protein / VA... 321 1e-86
ref|XP_507128.1| PREDICTED OJ1368_G08.30 gene product [Oryza sat... 316 4e-85
dbj|BAA97133.1| membrane associated protein [Arabidopsis thaliana] 306 5e-82
gb|AAB41326.1| membrane associated protein [Arabidopsis thaliana] 292 7e-78
dbj|BAD94385.1| membrane associated protein [Arabidopsis thaliana] 270 4e-71
ref|NP_974584.1| vesicle-associated membrane family protein / VA... 233 4e-60
emb|CAB81048.1| AT4g05060 [Arabidopsis thaliana] gi|5732080|gb|A... 228 1e-58
dbj|BAD93970.1| hypothetical protein [Arabidopsis thaliana] 134 3e-30
emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pi... 62 1e-08
emb|CAH65115.1| hypothetical protein [Gallus gallus] 62 2e-08
gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP... 60 8e-08
gb|AAH65663.1| Unknown (protein for MGC:65776) [Danio rerio] gi|... 59 2e-07
gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis tha... 59 2e-07
ref|NP_001011333.1| hypothetical protein LOC496796 [Xenopus trop... 58 2e-07
gb|AAH76262.1| VAMP (vesicle-associated membrane protein)-associ... 58 3e-07
>gb|AAM64857.1| putative membrane associated protein [Arabidopsis thaliana]
gi|20465773|gb|AAM20375.1| putative membrane associated
protein [Arabidopsis thaliana]
gi|17979373|gb|AAL49912.1| putative membrane associated
protein [Arabidopsis thaliana]
gi|18415696|ref|NP_567627.1| vesicle-associated membrane
family protein / VAMP family protein [Arabidopsis
thaliana]
Length = 295
Score = 363 bits (931), Expect = 3e-99
Identities = 196/290 (67%), Positives = 223/290 (76%), Gaps = 30/290 (10%)
Query: 1 MAVAEPKLHSEPKV-WNFFKLPFRNSN-----------------TSSTNTTSSSVNNNLH 42
M + E K S+ K W FFK+PFRNS+ SS++T+S N++ H
Sbjct: 1 MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60
Query: 43 HH-----HHHNPNSNTPL---EGSTSHT--SNSVSSVARSLLPTRRRLKLDPSNKLYFPY 92
HH HHH N P G H S SVSSVA+S LPT+RRLKLDPS KLYFPY
Sbjct: 61 HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120
Query: 93 EPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPEN 152
EPGKQVRSAI+IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIATVFKFVE PEN
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180
Query: 153 NEKP--EKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEK 210
NEKP ++S +KFKIMSLKVKG +DYVPELFDEQKD V+ EQILRV+FLDPER +P LEK
Sbjct: 181 NEKPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALEK 240
Query: 211 LKRQLADADAALEERKKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQGD 260
LKRQLA+ADAA+E RKKP E+ GPK+IGEGLVIDEWKERRERYLA+QQG+
Sbjct: 241 LKRQLAEADAAVEARKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGE 290
>gb|AAN28781.1| At4g05060/T32N4_12 [Arabidopsis thaliana]
gi|20453193|gb|AAM19836.1| AT4g05060/T32N4_12
[Arabidopsis thaliana] gi|18412787|ref|NP_567287.1|
vesicle-associated membrane family protein / VAMP family
protein [Arabidopsis thaliana]
Length = 287
Score = 340 bits (873), Expect = 2e-92
Identities = 187/284 (65%), Positives = 213/284 (74%), Gaps = 23/284 (8%)
Query: 1 MAVAEPKLHSEPKVWNFFKLPFRNSN-------------TSSTNTTSSSVNNNLHHHHHH 47
MA+ E K S+ + W FKLPFRNSN TSS++ TSS +N N H H
Sbjct: 1 MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60
Query: 48 NPNSNTPLE---GSTSHTSN----SVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRS 100
P+ G H S S+SSVARSLLPT+RRLKLDPS KLYFPYEPGKQVRS
Sbjct: 61 FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120
Query: 101 AIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP--EK 158
AI+IKNTSKS+VAFKFQTT PKSCFMRP GAILAPGE IIATVFKFVE PENNEKP +K
Sbjct: 121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180
Query: 159 SGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADA 218
SG+KFKIMSLK+K DY+PELF+EQKD V+ EQ++RVVFLDPE P+ ++EKLK QLA+A
Sbjct: 181 SGVKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEA 240
Query: 219 DAALEERKKPAED-AGPKIIGEGLVIDEWKERRERYLAKQQGDV 261
DAA E RKK +E GPK IGEGLVIDEWK+RRERYLA+QQG V
Sbjct: 241 DAADEARKKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQGGV 284
>gb|AAM65052.1| membrane associated protein-like protein [Arabidopsis thaliana]
Length = 287
Score = 338 bits (867), Expect = 9e-92
Identities = 186/284 (65%), Positives = 212/284 (74%), Gaps = 23/284 (8%)
Query: 1 MAVAEPKLHSEPKVWNFFKLPFRNSN-------------TSSTNTTSSSVNNNLHHHHHH 47
MA+ E K S+ + W FKLPFRNSN TSS++ TSS +N N H H
Sbjct: 1 MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60
Query: 48 NPNSNTPLE---GSTSHTSN----SVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRS 100
P+ G H S S+SSVARSLLPT+RRLKLDPS KLYFPYEPGKQVRS
Sbjct: 61 FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRS 120
Query: 101 AIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP--EK 158
AI+IKNTSKS+VAFKFQTT PKSCFMRP GAILAPGE IIATVFKFVE PENNEKP +K
Sbjct: 121 AIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEIIATVFKFVEPPENNEKPMEQK 180
Query: 159 SGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADA 218
SG+KFKIMSLK+K DY+PELF+EQKD V+ EQ++RVVFLDPE P+ ++EKL QLA+A
Sbjct: 181 SGVKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLXSQLAEA 240
Query: 219 DAALEERKKPAED-AGPKIIGEGLVIDEWKERRERYLAKQQGDV 261
DAA E RKK +E GPK IGEGLVIDEWK+RRERYLA+QQG V
Sbjct: 241 DAADEARKKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQGGV 284
>emb|CAB81252.1| putative membrane associated protein [Arabidopsis thaliana]
gi|3080389|emb|CAA18709.1| putative membrane associated
protein [Arabidopsis thaliana] gi|7485721|pir||T05153
hypothetical protein F18E5.70 - Arabidopsis thaliana
Length = 293
Score = 335 bits (860), Expect = 6e-91
Identities = 184/288 (63%), Positives = 212/288 (72%), Gaps = 28/288 (9%)
Query: 1 MAVAEPKLHSEPKV-WNFFKLPFRNSN-----------------TSSTNTTSSSVNNNLH 42
M + E K S+ K W FFK+PFRNS+ SS++T+S N++ H
Sbjct: 1 MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60
Query: 43 HH-----HHHNPNSNTPL---EGSTSHT--SNSVSSVARSLLPTRRRLKLDPSNKLYFPY 92
HH HHH N P G H S SVSSVA+S LPT+RRLKLDPS KLYFPY
Sbjct: 61 HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120
Query: 93 EPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPEN 152
EPGKQVRSAI+IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIAT F +
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATGICFFCFLAS 180
Query: 153 NEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLK 212
++S +KFKIMSLKVKG +DYVPELFDEQKD V+ EQILRV+FLDPER +P LEKLK
Sbjct: 181 KPMDQRSRVKFKIMSLKVKGPMDYVPELFDEQKDDVSKEQILRVIFLDPERSNPALEKLK 240
Query: 213 RQLADADAALEERKKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQGD 260
RQLA+ADAA+E RKKP E+ GPK+IGEGLVIDEWKERRERYLA+QQG+
Sbjct: 241 RQLAEADAAVEARKKPPEETGPKMIGEGLVIDEWKERRERYLAQQQGE 288
>ref|XP_478696.1| putative 27k vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|34394013|dbj|BAC84037.1| putative 27k
vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
Length = 284
Score = 325 bits (833), Expect = 8e-88
Identities = 172/265 (64%), Positives = 204/265 (76%), Gaps = 13/265 (4%)
Query: 13 KVWNFFKLPFRNSNTSSTNTT------SSSVNNNLHHH----HHHNPNSNTPLEGSTSHT 62
K+WN ++PF + + SSS + +HHH + H + G +
Sbjct: 22 KLWNLCRMPFWQPGGAPATASAPPPPSSSSSSAGIHHHSAGRYGHEGGGGGAVAGDGA-P 80
Query: 63 SNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPK 122
+ S+SSVA+SLLP RRRL+LDP NKLYFPY+PG+QVRSAIRIKNTSKS+VAFKFQTTAPK
Sbjct: 81 AGSISSVAKSLLPARRRLRLDPPNKLYFPYQPGQQVRSAIRIKNTSKSHVAFKFQTTAPK 140
Query: 123 SCFMRPPGAILAPGESIIATVFKFVEQPENNEKP-EKSGLKFKIMSLKVKGSIDYVPELF 181
SCFMRPPGAILAPGE+IIATVFKFVE PENNE +K +KFKI+SLKVKG +DY PE+F
Sbjct: 141 SCFMRPPGAILAPGETIIATVFKFVEHPENNENVLQKCKVKFKILSLKVKGPMDYAPEMF 200
Query: 182 DEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAGPKIIGEGL 241
DEQ+DQ VE+ILRVVFL+ E P P LEKL QLA+A+AALE RKKP E+ GPKI+GEGL
Sbjct: 201 DEQRDQAVVEKILRVVFLNVENPGPQLEKLNNQLAEAEAALEARKKPPEENGPKIVGEGL 260
Query: 242 VIDEWKERRERYLAKQQGDVVVDSV 266
VIDEWKERRERYLA+QQ + VVDSV
Sbjct: 261 VIDEWKERRERYLAQQQVE-VVDSV 284
>ref|NP_568804.1| vesicle-associated membrane family protein / VAMP family protein
[Arabidopsis thaliana]
Length = 266
Score = 321 bits (823), Expect = 1e-86
Identities = 169/266 (63%), Positives = 208/266 (77%), Gaps = 8/266 (3%)
Query: 1 MAVAEPKLHSEPKVWNFFKL-PFRNSNTSSTNTTSSSVNNNLHHHHHHNPNSNTPLEGST 59
M + + + S K N F+L PF ST ++SS+ N N ++ H N NT + +
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRR--STTSSSSTQNPNQNYRSRHG-NRNTDIS-AV 56
Query: 60 SHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTT 119
S ++SSVARSLLP RRRL+LDPS+ LYFPYEPGKQVRSAI++KNTSKS+ AFKFQTT
Sbjct: 57 SKPPLTMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTT 116
Query: 120 APKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP---EKSGLKFKIMSLKVKGSIDY 176
APKSC+MRPPG +LAPGES+ ATVFKFVE PENNEK +KS +KFKIMSLKVK ++Y
Sbjct: 117 APKSCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEY 176
Query: 177 VPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAGPKI 236
VPELFDEQKDQVAVEQ+LRV+F+D +RPS LEKLKRQL +A+AA+E RKKP + GP++
Sbjct: 177 VPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRV 236
Query: 237 IGEGLVIDEWKERRERYLAKQQGDVV 262
+GEGLVIDEWKERRE+YLA+QQ + V
Sbjct: 237 VGEGLVIDEWKERREKYLARQQVESV 262
>ref|XP_507128.1| PREDICTED OJ1368_G08.30 gene product [Oryza sativa (japonica
cultivar-group)] gi|50941005|ref|XP_480030.1| 27k
vesicle-associated membrane protein-associated
protein-like [Oryza sativa (japonica cultivar-group)]
gi|45736132|dbj|BAD13178.1| 27k vesicle-associated
membrane protein-associated protein-like [Oryza sativa
(japonica cultivar-group)] gi|42761338|dbj|BAD11591.1|
27k vesicle-associated membrane protein-associated
protein-like [Oryza sativa (japonica cultivar-group)]
Length = 233
Score = 316 bits (810), Expect = 4e-85
Identities = 157/201 (78%), Positives = 182/201 (90%), Gaps = 2/201 (0%)
Query: 60 SHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTT 119
+ +S+ ++V RSLLPTRRRL+LDP +KL+FPYEPGKQVRSA++IKN SKS+VAFKFQTT
Sbjct: 26 ARSSSGGAAVIRSLLPTRRRLRLDPPSKLFFPYEPGKQVRSAVKIKNISKSHVAFKFQTT 85
Query: 120 APKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP--EKSGLKFKIMSLKVKGSIDYV 177
APKSCFMRPPG ILAPGESIIATVFKFVE PENNEKP +K +KFKI+SLKVKG ++YV
Sbjct: 86 APKSCFMRPPGGILAPGESIIATVFKFVEHPENNEKPLDQKCKVKFKIVSLKVKGPMEYV 145
Query: 178 PELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAGPKII 237
PELFDEQK+QVAVEQILRVVFLD ER +P ++KLKRQLA+A+AALE RKKP ED GP+I+
Sbjct: 146 PELFDEQKNQVAVEQILRVVFLDAERQTPQMDKLKRQLAEAEAALEARKKPPEDTGPRIV 205
Query: 238 GEGLVIDEWKERRERYLAKQQ 258
GEGLVIDEWKERRERYLA+QQ
Sbjct: 206 GEGLVIDEWKERRERYLARQQ 226
>dbj|BAA97133.1| membrane associated protein [Arabidopsis thaliana]
Length = 295
Score = 306 bits (783), Expect = 5e-82
Identities = 169/295 (57%), Positives = 208/295 (70%), Gaps = 37/295 (12%)
Query: 1 MAVAEPKLHSEPKVWNFFKL-PFRNSNTSSTNTTSSSVNNNLHHHHHHNPNSNTPLEGST 59
M + + + S K N F+L PF ST ++SS+ N N ++ H N NT + +
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRR--STTSSSSTQNPNQNYRSRHG-NRNTDIS-AV 56
Query: 60 SHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTT 119
S ++SSVARSLLP RRRL+LDPS+ LYFPYEPGKQVRSAI++KNTSKS+ AFKFQTT
Sbjct: 57 SKPPLTMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTT 116
Query: 120 APKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP---EKSGLKFKIMSLKVKGSIDY 176
APKSC+MRPPG +LAPGES+ ATVFKFVE PENNEK +KS +KFKIMSLKVK ++Y
Sbjct: 117 APKSCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEY 176
Query: 177 VPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAGPKI 236
VPELFDEQKDQVAVEQ+LRV+F+D +RPS LEKLKRQL +A+AA+E RKKP + GP++
Sbjct: 177 VPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRV 236
Query: 237 IGEGLVIDEW-----------------------------KERRERYLAKQQGDVV 262
+GEGLVIDEW KERRE+YLA+QQ + V
Sbjct: 237 VGEGLVIDEWVTYNYKIFGPFIVVPSFSHIFTKVCVIYQKERREKYLARQQVESV 291
>gb|AAB41326.1| membrane associated protein [Arabidopsis thaliana]
Length = 265
Score = 292 bits (747), Expect = 7e-78
Identities = 158/266 (59%), Positives = 198/266 (74%), Gaps = 9/266 (3%)
Query: 1 MAVAEPKLHSEPKVWNFFKL-PFRNSNTSSTNTTSSSVNNNLHHHHHHNPNSNTPLEGST 59
M + + + S K N F+L PF ST ++SS+ N N ++ H N NT + +
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRR--STTSSSSTQNPNQNYRSRHG-NRNTDIS-AV 56
Query: 60 SHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTT 119
S ++SSVARSLLP RRRL+LDPS+ LYFPYEPGKQVRSAI++KNTSKS+ AFKFQTT
Sbjct: 57 SKPPLTMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTT 116
Query: 120 APKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP---EKSGLKFKIMSLKVKGSIDY 176
APKSC+MRPPG + E + + VE PENNEK +KS +KFKIMSLKVK ++Y
Sbjct: 117 APKSCYMRPPGGVWLQ-ERVFCYCVQVVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEY 175
Query: 177 VPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAGPKI 236
VPELFDEQKDQVAVEQ+LRV+F+D +RPS LEKLKRQL +A+AA+E RKKP + GP++
Sbjct: 176 VPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRV 235
Query: 237 IGEGLVIDEWKERRERYLAKQQGDVV 262
+GEGLVIDEWKERRE+YLA+QQ + V
Sbjct: 236 VGEGLVIDEWKERREKYLARQQVESV 261
>dbj|BAD94385.1| membrane associated protein [Arabidopsis thaliana]
Length = 233
Score = 270 bits (689), Expect = 4e-71
Identities = 146/237 (61%), Positives = 179/237 (74%), Gaps = 8/237 (3%)
Query: 1 MAVAEPKLHSEPKVWNFFKL-PFRNSNTSSTNTTSSSVNNNLHHHHHHNPNSNTPLEGST 59
M + + + S K N F+L PF ST ++SS+ N N ++ H N NT + +
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRR--STTSSSSTQNPNQNYRSRHG-NRNTDIS-AV 56
Query: 60 SHTSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTT 119
S ++SSVARSLLP RRRL+L PS+ LYFPYEPGKQVRSAI++KNTSKS+ AFKFQTT
Sbjct: 57 SKPPLTMSSVARSLLPARRRLRLGPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTT 116
Query: 120 APKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP---EKSGLKFKIMSLKVKGSIDY 176
APKSC+MRPPG +LAPGES+ ATV KFVE PENNEK +KS +KFKIMSLKVK ++Y
Sbjct: 117 APKSCYMRPPGGVLAPGESVFATVLKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEY 176
Query: 177 VPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEERKKPAEDAG 233
VPELFDEQKDQVAVEQ+LRV+F+D +RPS LEKLKRQL +A+AA+E RKKP + G
Sbjct: 177 VPELFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETG 233
>ref|NP_974584.1| vesicle-associated membrane family protein / VAMP family protein
[Arabidopsis thaliana]
Length = 212
Score = 233 bits (594), Expect = 4e-60
Identities = 132/210 (62%), Positives = 150/210 (70%), Gaps = 30/210 (14%)
Query: 1 MAVAEPKLHSEPKV-WNFFKLPFRNSN-----------------TSSTNTTSSSVNNNLH 42
M + E K S+ K W FFK+PFRNS+ SS++T+S N++ H
Sbjct: 1 MTMTEEKPTSDGKGGWGFFKIPFRNSSGHRNAASSAATSPFPSGASSSSTSSHLHNHHQH 60
Query: 43 HH-----HHHNPNSNTPL---EGSTSHT--SNSVSSVARSLLPTRRRLKLDPSNKLYFPY 92
HH HHH N P G H S SVSSVA+S LPT+RRLKLDPS KLYFPY
Sbjct: 61 HHQHHHQHHHQLGYNGPHGDGSGQNQHPTPSPSVSSVAKSFLPTKRRLKLDPSEKLYFPY 120
Query: 93 EPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPEN 152
EPGKQVRSAI+IKNTSKS+VAFKFQTTAPKSCFMRPPGAILAPGE+IIATVFKFVE PEN
Sbjct: 121 EPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPEN 180
Query: 153 NEKP--EKSGLKFKIMSLKVKGSIDYVPEL 180
NEKP ++S +KFKIMSLKVKG +DYVPEL
Sbjct: 181 NEKPMDQRSRVKFKIMSLKVKGPMDYVPEL 210
>emb|CAB81048.1| AT4g05060 [Arabidopsis thaliana] gi|5732080|gb|AAD48979.1| contains
similarity to Arabidopsis thaliana membrane associated
protein (GB:U83655) gi|25365874|pir||F85063 hypothetical
protein AT4g05060 [imported] - Arabidopsis thaliana
Length = 269
Score = 228 bits (581), Expect = 1e-58
Identities = 144/284 (50%), Positives = 173/284 (60%), Gaps = 41/284 (14%)
Query: 1 MAVAEPKLHSEPKVWNFFKLPFRNSN-------------TSSTNTTSSSVNNNLHHHHHH 47
MA+ E K S+ + W FKLPFRNSN TSS++ TSS +N N H H
Sbjct: 1 MALTEDKSDSDGRRWGKFKLPFRNSNSQAPSASSSSSMATSSSSVTSSHLNQNYIHQSRH 60
Query: 48 NPNSNTPLE---GSTSHTSN----SVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRS 100
P+ G H S S+SSVARSLLPT+RRLKLDPS KLYFP+
Sbjct: 61 FQYHGPPVVEGLGQNHHQSAATIPSMSSVARSLLPTKRRLKLDPSAKLYFPF-------- 112
Query: 101 AIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKP--EK 158
SN + K AP C+ G I + +V PENNEKP +K
Sbjct: 113 ---------SNNSTKELLHAPGWCYSCSRGRNYRNWVLFIIGLDDYVP-PENNEKPMEQK 162
Query: 159 SGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADA 218
SG+KFKIMSLK+K DY+PELF+EQKD V+ EQ++RVVFLDPE P+ ++EKLK QLA+A
Sbjct: 163 SGVKFKIMSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEA 222
Query: 219 DAALEERKKPAED-AGPKIIGEGLVIDEWKERRERYLAKQQGDV 261
DAA E RKK +E GPK IGEGLVIDEWK+RRERYLA+QQG V
Sbjct: 223 DAADEARKKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQGGV 266
>dbj|BAD93970.1| hypothetical protein [Arabidopsis thaliana]
Length = 100
Score = 134 bits (337), Expect = 3e-30
Identities = 68/97 (70%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
Query: 166 MSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEER 225
MSLK+K DY+PELF+EQKD V+ EQ++RVVFLDPE P+ ++EKLK QLA+ADAA E R
Sbjct: 1 MSLKMKVPTDYMPELFEEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEADAADEAR 60
Query: 226 KKPAED-AGPKIIGEGLVIDEWKERRERYLAKQQGDV 261
KK +E GPK IGEGLVIDEWK+RRERYLA+QQG V
Sbjct: 61 KKASEGIVGPKPIGEGLVIDEWKQRRERYLAQQQGGV 97
>emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pir||JC7234 27k
vesicle-associated membrane protein-associated protein -
curled-leaved tobacco
Length = 240
Score = 62.4 bits (150), Expect = 1e-08
Identities = 41/133 (30%), Positives = 74/133 (54%), Gaps = 5/133 (3%)
Query: 80 LKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAP--GE 137
L+++P +L FP+E KQ+ +I++ N S + VAFK +TT PK +RP ++ P
Sbjct: 9 LQIEPL-ELQFPFELKKQISCSIQLTNKSDNYVAFKVKTTNPKKYCVRPNTGVVMPHSAS 67
Query: 138 SIIATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVV 197
+I T+ E P + + +K L+ + S D PE+F++++ + LRV+
Sbjct: 68 DVIVTMQAQKEAPADMQCKDKFLLQSVVASPGATAK-DITPEMFNKEEGNHVEDCKLRVI 126
Query: 198 FLDPER-PSPILE 209
++ P++ PSP+ E
Sbjct: 127 YVPPQQPPSPVQE 139
>emb|CAH65115.1| hypothetical protein [Gallus gallus]
Length = 151
Score = 62.0 bits (149), Expect = 2e-08
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 68 SVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMR 127
+ A +L + L LDP L F V + ++++N S V FK +TTAP+ +R
Sbjct: 2 AAAGALAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVR 61
Query: 128 PPGAILAPGESIIATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQ 187
P I+ PG S+I +V + QP + + EKS KF + ++ +I + ++ E K
Sbjct: 62 PNSGIIDPGSSVIVSV---MLQPFDYDPNEKSKHKFMVQTIYAPPNISDMEAVWKEAKPD 118
Query: 188 VAVEQILRVVFLDPERPSPILEK 210
++ LR VF P ++ K
Sbjct: 119 ELMDSKLRCVFEMPNENDKLVSK 141
>gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP13405.1| At3g60600
[Arabidopsis thaliana] gi|17473763|gb|AAL38320.1|
putative protein [Arabidopsis thaliana]
gi|18411661|ref|NP_567101.1| vesicle-associated membrane
protein, putative / VAMP, putative [Arabidopsis
thaliana]
Length = 256
Score = 59.7 bits (143), Expect = 8e-08
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 88 LYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGES--IIATVFK 145
L FP+E KQ+ ++ + N + +NVAFK +TT PK +RP ++ P + ++ T+
Sbjct: 30 LQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQA 89
Query: 146 FVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPER-P 204
E P + + +K L+ I S V + PE+F ++ E LRV ++ P R P
Sbjct: 90 QKEAPSDMQCKDKFLLQGVIASPGVTAK-EVTPEMFSKEAGHRVEETKLRVTYVAPPRPP 148
Query: 205 SPILE 209
SP+ E
Sbjct: 149 SPVHE 153
>gb|AAH65663.1| Unknown (protein for MGC:65776) [Danio rerio]
gi|42734418|ref|NP_956212.2| VAMP (vesicle-associated
membrane protein)-associated protein A [Danio rerio]
Length = 246
Score = 58.5 bits (140), Expect = 2e-07
Identities = 41/148 (27%), Positives = 72/148 (47%), Gaps = 14/148 (9%)
Query: 80 LKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESI 139
L L+PSN L F V + ++++N S V FK +TTAP+ +RP I+ PG ++
Sbjct: 8 LILEPSNDLRFRGPFTDVVTTNLKLRNPSDRRVCFKVKTTAPRRYCVRPNSGIIDPGATV 67
Query: 140 IATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVF- 198
+V + QP + + EKS KF + ++ S+ + ++ + K ++ LR VF
Sbjct: 68 TISV---MLQPFDYDPNEKSKHKFMVQTIFAPSSVSDLEAMWKDAKPDDLMDSKLRCVFD 124
Query: 199 ----------LDPERPSPILEKLKRQLA 216
L+ +P+ +L K + A
Sbjct: 125 MPSDNDKMSELESSKPACVLNSSKAEAA 152
>gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis thaliana]
Length = 240
Score = 58.5 bits (140), Expect = 2e-07
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 88 LYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGES--IIATVFK 145
L FP+E KQ+ ++ + N + +NVAFK +TT PK +RP ++ P + ++ T+
Sbjct: 14 LQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQA 73
Query: 146 FVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFL-DPERP 204
E P + + +K L+ I S V + PE+F ++ E LRV ++ P+ P
Sbjct: 74 QKEAPSDMQCKDKFLLQGVIASPGVTAK-EVTPEMFSKEAGHRVEETKLRVTYVAPPQPP 132
Query: 205 SPILE 209
SP+ E
Sbjct: 133 SPVHE 137
>ref|NP_001011333.1| hypothetical protein LOC496796 [Xenopus tropicalis]
gi|56789354|gb|AAH88480.1| Hypothetical LOC496796
[Xenopus tropicalis]
Length = 227
Score = 58.2 bits (139), Expect = 2e-07
Identities = 41/134 (30%), Positives = 67/134 (49%), Gaps = 4/134 (2%)
Query: 80 LKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESI 139
L LDP N+L F V + ++++N S V FK +TTAP+ +RP + PG ++
Sbjct: 8 LILDPPNELKFKGPFTDVVTTNLKLRNPSDKKVCFKVKTTAPRRYCVRPNSGTIDPGSTV 67
Query: 140 IATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFL 199
+V + QP + + EKS KF + ++ +I + ++ E K ++ LR VF
Sbjct: 68 TVSV---MLQPFDYDPNEKSKHKFMVQTIFAPPTISDMEAVWKEAKPDDLMDSKLRCVFD 124
Query: 200 DP-ERPSPILEKLK 212
P E+ P E K
Sbjct: 125 MPHEQEKPTHESTK 138
>gb|AAH76262.1| VAMP (vesicle-associated membrane protein)-associated protein A,
like [Danio rerio] gi|50540158|ref|NP_001002546.1| VAMP
(vesicle-associated membrane protein)-associated protein
A, like [Danio rerio]
Length = 246
Score = 57.8 bits (138), Expect = 3e-07
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 80 LKLDPSNKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESI 139
L LDP N L F V + +++KN S+ V FK +TTAP+ +RP I+ PG ++
Sbjct: 8 LVLDPPNDLKFKGPFTDVVTANLKLKNPSERKVCFKVKTTAPRRYCVRPNSGIIDPGATL 67
Query: 140 IATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFL 199
+V + QP + + EKS KF + ++ ++ ++ + K ++ LR VF
Sbjct: 68 TISV---MLQPFDYDPNEKSKHKFMVQTIFAPPAVSDTEAMWKDAKPDELMDSKLRCVFE 124
Query: 200 DPERPSPILE 209
P + E
Sbjct: 125 LPSENDKVNE 134
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,962,540
Number of Sequences: 2540612
Number of extensions: 19958374
Number of successful extensions: 267532
Number of sequences better than 10.0: 1683
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 539
Number of HSP's that attempted gapping in prelim test: 191956
Number of HSP's gapped (non-prelim): 31616
length of query: 266
length of database: 863,360,394
effective HSP length: 126
effective length of query: 140
effective length of database: 543,243,282
effective search space: 76054059480
effective search space used: 76054059480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)
Medicago: description of AC146792.8