BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146791.7 + phase: 0 /pseudo
         (694 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_618799.1| PREDICTED: similar to RSRC1 protein [Mus musculus]    36  4.8

>ref|XP_618799.1| PREDICTED: similar to RSRC1 protein [Mus musculus]
          Length = 560

 Score = 35.8 bits (81), Expect = 4.8
 Identities = 29/76 (38%), Positives = 36/76 (47%), Gaps = 13/76 (17%)

Query: 447 GYLLIEEGCGIGCWLVDMVLGMGGWRMGAGVVLFG------GRRLVGLEEGR-----VGA 495
           GY L   G G G W + M  G G W MG G+ + G      G RL  +  G      V A
Sbjct: 4   GYGLWVMGMGYGLWAMGM--GYGLWAMGYGLWVMGYRLWVMGYRLWAMGMGYGLWVWVWA 61

Query: 496 VLDGLRVVWLGVWVMG 511
           +  GL V+  G+WVMG
Sbjct: 62  MGYGLWVMGYGLWVMG 77


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.370    0.171    0.670 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 963,488,581
Number of Sequences: 2540612
Number of extensions: 36846745
Number of successful extensions: 209823
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 209810
Number of HSP's gapped (non-prelim): 8
length of query: 694
length of database: 863,360,394
effective HSP length: 135
effective length of query: 559
effective length of database: 520,377,774
effective search space: 290891175666
effective search space used: 290891175666
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 79 (35.0 bits)