BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146790.7 + phase: 0
(546 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM51838.1| Unknown protein [Oryza sativa (japonica cultivar-... 178 3e-43
gb|AAM91803.1| unknown protein [Arabidopsis thaliana] gi|1387788... 172 2e-41
gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gi|2014... 172 2e-41
dbj|BAD81188.1| la related protein -like [Oryza sativa (japonica... 154 7e-36
dbj|BAB10415.1| unnamed protein product [Arabidopsis thaliana] 145 2e-33
emb|CAB81498.1| putative protein [Arabidopsis thaliana] gi|38058... 133 1e-29
gb|AAM98107.1| At5g21160/T10F18_190 [Arabidopsis thaliana] gi|29... 129 2e-28
gb|AAP44746.1| putative extensin [Oryza sativa (japonica cultiva... 115 5e-24
dbj|BAC79183.1| unknown protein [Oryza sativa (japonica cultivar... 110 1e-22
ref|NP_001014058.1| hypothetical protein LOC310348 [Rattus norve... 84 2e-14
gb|EAL90306.1| La domain family [Aspergillus fumigatus Af293] 82 4e-14
gb|AAK93859.2| Hypothetical protein R144.7 [Caenorhabditis elega... 82 4e-14
pir||T16754 hypothetical protein R144.7 - Caenorhabditis elegans 82 4e-14
ref|NP_835144.1| La ribonucleoprotein domain family member 2 iso... 81 7e-14
ref|NP_060548.2| La ribonucleoprotein domain family member 2 iso... 81 7e-14
ref|NP_115615.2| La ribonucleoprotein domain family member 2 iso... 81 7e-14
emb|CAH56210.1| hypothetical protein [Homo sapiens] 81 7e-14
emb|CAH56379.1| hypothetical protein [Homo sapiens] 81 7e-14
gb|AAH25528.1| 1700108L22Rik protein [Mus musculus] 81 1e-13
ref|XP_619893.1| PREDICTED: hypothetical protein LOC214048 [Mus ... 81 1e-13
>gb|AAM51838.1| Unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 481
Score = 178 bits (452), Expect = 3e-43
Identities = 136/441 (30%), Positives = 197/441 (43%), Gaps = 64/441 (14%)
Query: 117 ASDGGDGGNAGGSKKP----------AWNKQPLNGVAVEI-----GPVMGAESWPALSES 161
A++GG G + P AW K+P NG AV + P+M A+SWPAL
Sbjct: 10 AANGGGGTTPAATGSPPAGKKAAAAAAW-KRPGNGAAVPVVVAPGSPIMDADSWPALPGL 68
Query: 162 AKIPGK-LPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPN 220
A P L P K +P A P+ + P IS +S A + P+
Sbjct: 69 ASPPPTTLTPTPMPPKASPKVAPLPPPAEAVIPPIS------------LGNSGAPDANPD 116
Query: 221 RPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDH 280
P+R P L P P PVY P+ + DH
Sbjct: 117 HEAPVRNPPARRALVMPVGDGLDK--RAPGSEPSPVYT-----------PNARSNGGGDH 163
Query: 281 HRNNNWDARP------FVGGSSRRGHFGSHPRGD-GSYHQNSYSSRRE----HDRGNYAN 329
H+N + + P + GG +RRG+ G G G H + +R D +
Sbjct: 164 HQNGRYGSHPHSRGSGYGGGGNRRGNGGGGGGGRRGQEHHGGFDGQRRGGGRRDGHGPGH 223
Query: 330 TRDAHAPQPRMPPRGILRPPPPSTAAFLGPQT--IGPFPAPVAYPDF----YYFPTVPLD 383
+ H P P ++ PP F+ P T P+ AP+ +P+ YYF T PL+
Sbjct: 224 QQRGHHPSYIRAPLAVVTAAPPPPPPFVNPATPQTPPYGAPIGFPEIAPHVYYF-TSPLE 282
Query: 384 PFRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPI 443
+ +P PH SP L ++ QI+YYFSD NL D FL+ +MD++GWVP+
Sbjct: 283 GVQALPFVPHPASPPAMLIPQFDPLRAELLKQIEYYFSDDNLCKDIFLRRHMDDQGWVPL 342
Query: 444 TLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRN----WIDRLTSAQVQADAGS 499
LIA F +VK LT+N+Q IL+++ S VV+VQGDKLR+R W+ +GS
Sbjct: 343 PLIAGFNQVKKLTNNVQFILETVLQSTVVEVQGDKLRKRERWEIWLLPKQGYSAGNSSGS 402
Query: 500 VSPIESRDNSFTADFQTITLD 520
+SP+ S +S + FQ++ L+
Sbjct: 403 LSPVTSNIDSLASQFQSVGLE 423
>gb|AAM91803.1| unknown protein [Arabidopsis thaliana] gi|13877889|gb|AAK44022.1|
unknown protein [Arabidopsis thaliana]
gi|18419738|ref|NP_567991.1| La domain-containing
protein [Arabidopsis thaliana]
Length = 523
Score = 172 bits (437), Expect = 2e-41
Identities = 166/563 (29%), Positives = 253/563 (44%), Gaps = 98/563 (17%)
Query: 1 MVTTQNNHSPTSVPSP--------APPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQ 52
M + +N+ +S SP +P ++ +P + + SPW Q+VRG
Sbjct: 1 MASATSNNPASSSMSPRRISGNHGSPTASVAQSPRRPSRQVSSPWTQIVRG--------- 51
Query: 53 SQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKN 112
+S P +++++ + ++ P + P A+V ++P A V++ A EK+
Sbjct: 52 --------ESEPIAAAAAVAGPSSPQSRAPIE--PIASVSVAAPTAAVLTVEAAAGDEKS 101
Query: 113 SNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPES 172
AS G D NAG KKP W K+P NG A E+GPVMGA SWPALSE+ K P +S
Sbjct: 102 E---ASGGQD--NAG--KKPVW-KRPSNG-ASEVGPVMGASSWPALSETTKAPSN---KS 149
Query: 173 SSSKIAPPAAVDGSPSTSQGPIISHSPQRQG----STSNTKSSSMAN-NNLPNRPRPMRR 227
SS + V S S S S P QG S K + AN N PN R R
Sbjct: 150 SSDSLKSLGDVPSSSSAS-----SSVPVTQGIANASVPAPKQAGRANPNPTPNHSR-QRS 203
Query: 228 ISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWD 287
N A ++S P P + + SPR ++ N +
Sbjct: 204 FKQRNGASGSANGTVSQPSAQGSFTELPSH----------------NPSPRGQNQKNGFA 247
Query: 288 ARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNY-------ANTRDAHAPQPRM 340
++ GG+ S+ +G++HQ S+ RR + GN N R+ +A R
Sbjct: 248 SQNH-GGTENPSQRDSYRNQNGNHHQ-SHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRG 305
Query: 341 PPRGILRPPPPSTAAFLGPQTIGPFPAPVAYP----DFYYFPTVPLDPFRGMPVFPHMPS 396
P +R P P+ PFP+ + +P Y+P +P M PH
Sbjct: 306 TP-AFVRHPSPTVQPIPQFMAAQPFPSHIPFPTELAQSSYYPRMPY-----MTPIPH--G 357
Query: 397 PATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLT 456
P F+ + L + QI YYFSD NL D +L+ M+ EG+VP+ ++A F +V LT
Sbjct: 358 PQFFYHYQDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELT 417
Query: 457 SNIQLILDSMRNSNVVDVQGDKLRRR----NWIDRLTSAQVQADAGSVSPIESRDNSFTA 512
NIQ I+++++NS V+VQGD +R+R NW+ R + GS R ++
Sbjct: 418 DNIQQIVEALQNSPHVEVQGDFIRKRDNWQNWVLR------RNPTGSGPQSVDRADAVAK 471
Query: 513 DFQTITLDKTTKDE-GESSRQSQ 534
+++D+++ D G SS Q Q
Sbjct: 472 RLGNLSVDQSSADPIGGSSSQLQ 494
>gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana]
gi|20147195|gb|AAM10313.1| AT5g66100/K2A18_18
[Arabidopsis thaliana] gi|22328148|ref|NP_201411.2| La
domain-containing protein [Arabidopsis thaliana]
Length = 453
Score = 172 bits (436), Expect = 2e-41
Identities = 146/501 (29%), Positives = 230/501 (45%), Gaps = 85/501 (16%)
Query: 51 SQSQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPME 110
+ S S I S+ S SS P S D P ++ P S+P +P
Sbjct: 10 ANSASRFSIDSSISRSRHGDSSPWLL---PSDSHDHPTLSLSQDDP----FSAPSVSPPT 62
Query: 111 KNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGA-ESWPALSESAKIPGKLP 169
N+++ D NA P WN P + + ++GPVMGA ESWPALS SA+
Sbjct: 63 GNNSS------DYDNADKKPPPVWN-MPSSNSSSDVGPVMGAAESWPALSLSARSSSIKS 115
Query: 170 PESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRIS 229
P +SK P + P S + S S T S + A NN ++ +P RR +
Sbjct: 116 PSLDASKPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNN--SQRKPFRRNN 173
Query: 230 GSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDAR 289
++ + S+ SN PL + R+ N R
Sbjct: 174 NTS-----SSSTSSNVSNAAPL----------------------------NTRDQNHSQR 200
Query: 290 PFVGGSSRRGHF---------GSHPRGDGSYHQNSYSSRREHDRGNYA-------NTRDA 333
GGS G+F S+PRG+G +H N RR ++ GN + + RD
Sbjct: 201 G--GGSFGSGNFRNSQRNRNSSSYPRGEGLHHGN----RRNYEHGNQSGFSHRNYSGRDM 254
Query: 334 HAPQPR----MPPRGILRPP--PPSTAAFLGPQTIGPFPAPVAYPDF---YYFPTVPLDP 384
H R + P+ ++ PP P S+A ++ +G + P+ YPD+ + P DP
Sbjct: 255 HLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDP 314
Query: 385 FRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPIT 444
+ FP P +F ++ L N I+ Q++YYFS NL+ DE L+ M++EGWVP+
Sbjct: 315 MGLVGPFPLQPM---YFRNFDAILYNKILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVR 371
Query: 445 LIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRNWIDRLTSAQVQADAGSVSPIE 504
+IA F R+ LT+NIQ IL+++R+S VV++QG+ LRRR D+ + + +G +
Sbjct: 372 VIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAG-A 430
Query: 505 SRDNSFTADFQTITLDKTTKD 525
S + S + +++TL + +++
Sbjct: 431 SNNASLVSQIESMTLSERSRE 451
>dbj|BAD81188.1| la related protein -like [Oryza sativa (japonica cultivar-group)]
Length = 924
Score = 154 bits (389), Expect = 7e-36
Identities = 133/405 (32%), Positives = 186/405 (45%), Gaps = 52/405 (12%)
Query: 116 IASDGGD--GGNAGGSKKPA--WNKQ---PLNGVAVEIGPVMGAESWPALSES-----AK 163
+A +G D GG GG PA W K P+ G AV VMGA+SWPAL E+ A
Sbjct: 14 VAPEGADPAGGGGGGPGAPASPWRKTTPPPVAGEAV----VMGAKSWPALEEARQKVAAA 69
Query: 164 IPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPR 223
P ++ PA + S P S +P R + + NN +R
Sbjct: 70 EAAARPGAGNAGGGGEPAKGAQAQQPSPPPPQSQAPNRTHKFDGHGNPNK-NNQAYHRNG 128
Query: 224 PMRRISGSNIGPC-PAQSSLSNPPTPP---PLPPYPV----YQLPPAVSYPNMLPSIPDS 275
P RR +N P PA P P P+ P PV Y PP + +PS
Sbjct: 129 PKRRSPAANGTPSYPAAMPYHQHPGQPFYYPVIPSPVILHEYPYPP---FAVPVPSHDPH 185
Query: 276 SPRDHHRNNNWDARPF--VGGSSRRGHFGSHPRGDGSYHQNSYSSR-------REHDRGN 326
+ + + N+ P GG+ PRGD + +R R H N
Sbjct: 186 AGKSGYENSMPAYVPVDQAGGNEGNRPVPPQPRGDLHAWRPPVGARPQPGLEGRGHFNHN 245
Query: 327 YAN-----TRDAHAPQPRMPPRGILRPPP--PSTAAFL-GPQTIGPFPAPVAYPDFYYFP 378
+ N TR+ + PR +RP P T ++ GP GP P P +YY P
Sbjct: 246 WQNPQMFGTRENTSVPQGAGPRAFMRPMAHLPHTLGYINGPPYPGPMP-----PMYYYMP 300
Query: 379 TVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEE 438
VP++P RG P F P P L I+ Q++YYFSD NL +D FLKS MDE
Sbjct: 301 AVPMEPMRGPPRFVQNQPPP--HPVLSPELRAKILTQVEYYFSDSNLDHDNFLKSLMDEH 358
Query: 439 GWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRN 483
GWVPI+ +A+F R+K +T++IQLI++++ NS++++VQ +RRR+
Sbjct: 359 GWVPISKVADFNRLKKMTTDIQLIVEALANSSLLEVQDGNMRRRS 403
>dbj|BAB10415.1| unnamed protein product [Arabidopsis thaliana]
Length = 431
Score = 145 bits (367), Expect = 2e-33
Identities = 138/501 (27%), Positives = 217/501 (42%), Gaps = 107/501 (21%)
Query: 51 SQSQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPME 110
+ S S I S+ S SS P S D P ++ P S+P +P
Sbjct: 10 ANSASRFSIDSSISRSRHGDSSPWLL---PSDSHDHPTLSLSQDDP----FSAPSVSPPT 62
Query: 111 KNSNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGA-ESWPALSESAKIPGKLP 169
N+++ D NA P WN P + + ++GPVMGA ESWPALS SA+
Sbjct: 63 GNNSS------DYDNADKKPPPVWN-MPSSNSSSDVGPVMGAAESWPALSLSARSSSIKS 115
Query: 170 PESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRIS 229
P +SK P + P S + S S T S + A NN ++ +P RR +
Sbjct: 116 PSLDASKPFPDGSSSSIPPPQATSNTSTNANAGSSVSATSSENSAVNN--SQRKPFRRNN 173
Query: 230 GSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWDAR 289
++ + S+ SN PL + R+ N R
Sbjct: 174 NTS-----SSSTSSNVSNAAPL----------------------------NTRDQNHSQR 200
Query: 290 PFVGGSSRRGHF---------GSHPRGDGSYHQNSYSSRREHDRGNYA-------NTRDA 333
GGS G+F S+PRG+G +H N RR ++ GN + + RD
Sbjct: 201 G--GGSFGSGNFRNSQRNRNSSSYPRGEGLHHGN----RRNYEHGNQSGFSHRNYSGRDM 254
Query: 334 HAPQPR----MPPRGILRPP--PPSTAAFLGPQTIGPFPAPVAYPDF---YYFPTVPLDP 384
H R + P+ ++ PP P S+A ++ +G + P+ YPD+ + P DP
Sbjct: 255 HLQPQRGVGMIRPQMLMGPPSFPASSAQYMAAPQLGSYGGPIIYPDYAQHVFMPHPSPDP 314
Query: 385 FRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPIT 444
+ FP P +D NL+ DE L+ M++EGWVP+
Sbjct: 315 MGLVGPFPLQP------------------------IAD-NLSRDEHLRDQMNDEGWVPVR 349
Query: 445 LIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRNWIDRLTSAQVQADAGSVSPIE 504
+IA F R+ LT+NIQ IL+++R+S VV++QG+ LRRR D+ + + +G +
Sbjct: 350 VIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRRGDWDKYLLPREPSRSGPAAG-A 408
Query: 505 SRDNSFTADFQTITLDKTTKD 525
S + S + +++TL + +++
Sbjct: 409 SNNASLVSQIESMTLSERSRE 429
>emb|CAB81498.1| putative protein [Arabidopsis thaliana] gi|3805855|emb|CAA21475.1|
putative protein [Arabidopsis thaliana]
gi|3036793|emb|CAA18483.1| putative protein [Arabidopsis
thaliana] gi|7486390|pir||T04699 hypothetical protein
F4B14.160 - Arabidopsis thaliana
Length = 472
Score = 133 bits (335), Expect = 1e-29
Identities = 151/559 (27%), Positives = 232/559 (41%), Gaps = 141/559 (25%)
Query: 1 MVTTQNNHSPTSVPSP--------APPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQ 52
M + +N+ +S SP +P ++ +P + + SPW Q+VRG
Sbjct: 1 MASATSNNPASSSMSPRRISGNHGSPTASVAQSPRRPSRQVSSPWTQIVRG--------- 51
Query: 53 SQSPTGIHQSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSPLPAPMEKN 112
+S P +++++ + ++ P + P A+V ++P A V++ A EK+
Sbjct: 52 --------ESEPIAAAAAVAGPSSPQSRAPIE--PIASVSVAAPTAAVLTVEAAAGDEKS 101
Query: 113 SNTIASDGGDGGNAGGSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPES 172
AS G D NAG KKP W K+P NG A E+GPVMGA SWPALSE+ K P +S
Sbjct: 102 E---ASGGQD--NAG--KKPVW-KRPSNG-ASEVGPVMGASSWPALSETTKAPSN---KS 149
Query: 173 SSSKIAPPAAVDGSPSTSQGPIISHSPQRQG----STSNTKSSSMAN-NNLPNRPRPMRR 227
SS + V S S S S P QG S K + AN N PN R R
Sbjct: 150 SSDSLKSLGDVPSSSSAS-----SSVPVTQGIANASVPAPKQAGRANPNPTPNHSR-QRS 203
Query: 228 ISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSSPRDHHRNNNWD 287
N A ++S P P + + SPR ++ N +
Sbjct: 204 FKQRNGASGSANGTVSQPSAQGSFTELPSH----------------NPSPRGQNQKNGFA 247
Query: 288 ARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNY-------ANTRDAHAPQPRM 340
++ GG+ S+ +G++HQ S+ RR + GN N R+ +A R
Sbjct: 248 SQNH-GGTENPSQRDSYRNQNGNHHQ-SHGGRRNQEHGNQNWTFQRSFNGREGNAQSQRG 305
Query: 341 PPRGILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATF 400
P + P P T+ P P +A P H+P P
Sbjct: 306 TPAFVRHPSP----------TVQPIPQFMA----------------AQPFPSHIPFP--- 336
Query: 401 FPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQ 460
D +L+ M+ EG+VP+ ++A F +V LT NIQ
Sbjct: 337 --------------------------TDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQ 370
Query: 461 LILDSMRNSNVVDVQGDKLRRR----NWIDRLTSAQVQADAGSVSPIESRDNSFTADFQT 516
I+++++NS V+VQGD +R+R NW+ R + GS R ++
Sbjct: 371 QIVEALQNSPHVEVQGDFIRKRDNWQNWVLR------RNPTGSGPQSVDRADAVAKRLGN 424
Query: 517 ITLDKTTKDE-GESSRQSQ 534
+++D+++ D G SS Q Q
Sbjct: 425 LSVDQSSADPIGGSSSQLQ 443
>gb|AAM98107.1| At5g21160/T10F18_190 [Arabidopsis thaliana]
gi|29294066|gb|AAO73903.1| proline-rich protein family
[Arabidopsis thaliana] gi|18420415|ref|NP_568409.1| La
domain-containing protein / proline-rich family protein
[Arabidopsis thaliana] gi|15450527|gb|AAK96556.1|
AT5g21160/T10F18_190 [Arabidopsis thaliana]
Length = 826
Score = 129 bits (324), Expect = 2e-28
Identities = 129/436 (29%), Positives = 191/436 (43%), Gaps = 62/436 (14%)
Query: 128 GSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPPAA-VDGS 186
G+K P W K + V PVMGA SWPAL+++A+ P P + + APP+ + S
Sbjct: 23 GTKSP-W-KTTTSPVETIDAPVMGAHSWPALADAAQQPRPKNPPAPAP--APPSKNIPTS 78
Query: 187 PSTSQGPIISHSPQRQGSTSNTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPP 246
+ + + G +N + + + ++P P +G P + +PP
Sbjct: 79 IPIPTPAVTGQAKSKGGGKANPGHKNPSGRH--SKPGPRSNQNGPPPPPYLVHAVPYHPP 136
Query: 247 TPPPLPPYPVYQLP--PAVSYPNMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSH 304
PP+ P P P P YP +P + + + P V +
Sbjct: 137 PFPPMVPLPHAAGPDFPYAPYPPYPVPVPPVTESGNEKQVQASPLPPVLPA--------- 187
Query: 305 PRGDGSY---HQNSYSSRREHDRGNYANTRDAHAPQPRMPPRGILRPP--PPSTAAFLGP 359
P+GD HQ + R + PQ PR RPP P+ +GP
Sbjct: 188 PQGDPGKPWPHQRGFDPR--------------NMPQGA-GPRNFGRPPFMGPAPGFLVGP 232
Query: 360 QTIGP-FPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAES----SLSNVIVN 414
GP FP PV YY P P RG P P P S L + ++
Sbjct: 233 ---GPGFPGPV-----YYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLK 284
Query: 415 QIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDV 474
Q++YYFSD NL ND +L S MDEEGWVP +IA F RVK +T ++ I+ ++ SN V+V
Sbjct: 285 QVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEV 344
Query: 475 QGDKLRRRN-WID------RLTSAQVQADAGSVSP--IESRDN--SFTADFQTITLDKTT 523
QGD++R+R+ W D + TSA+ D SP I S DN + + T+ +
Sbjct: 345 QGDQIRKRDKWSDWIPASKKSTSAETIGDGDKDSPKSITSGDNFGNPSKGSSKPTVSDFS 404
Query: 524 KDEGESSRQSQLSNGS 539
+ +SSR + +G+
Sbjct: 405 SEGAQSSRTNNYKSGN 420
Score = 36.6 bits (83), Expect = 2.1
Identities = 62/244 (25%), Positives = 81/244 (32%), Gaps = 49/244 (20%)
Query: 69 SSSSSLTTVDQPPPSDDS-PKAAVVSSSPKAVVVSSPLPAPMEKNSNT-----IASDGGD 122
+++S + T+D P S P A + P+ +P PAP KN T + G
Sbjct: 30 TTTSPVETIDAPVMGAHSWPALADAAQQPRPKNPPAPAPAPPSKNIPTSIPIPTPAVTGQ 89
Query: 123 GGNAGGSKKPAWNKQPLNGVAVEIGP---VMGAESWPALSESAKI-PGKLPPESSSSKIA 178
+ GG K +K P +G + GP G P L + P PP A
Sbjct: 90 AKSKGGGKANPGHKNP-SGRHSKPGPRSNQNGPPPPPYLVHAVPYHPPPFPPMVPLPHAA 148
Query: 179 ---------PPAAVDGSPSTSQG----------PIISHSPQRQGSTSNTKSSSMANNNLP 219
PP V P T G P + +PQ N+P
Sbjct: 149 GPDFPYAPYPPYPVPVPPVTESGNEKQVQASPLPPVLPAPQGDPGKPWPHQRGFDPRNMP 208
Query: 220 --------NRPRPMRRISGSNIGPCPAQSS----LSNPPT-------PPPLPPYPVYQLP 260
RP M G +GP P L PP PP PYPV Q P
Sbjct: 209 QGAGPRNFGRPPFMGPAPGFLVGPGPGFPGPVYYLPGPPPGAIRGPYPPRFAPYPVNQGP 268
Query: 261 PAVS 264
P +S
Sbjct: 269 PILS 272
>gb|AAP44746.1| putative extensin [Oryza sativa (japonica cultivar-group)]
gi|50920281|ref|XP_470501.1| putative extensin [Oryza
sativa (japonica cultivar-group)]
Length = 383
Score = 115 bits (287), Expect = 5e-24
Identities = 107/363 (29%), Positives = 146/363 (39%), Gaps = 113/363 (31%)
Query: 149 VMGAESWPALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIIS-HSPQRQGSTSN 207
V+ SWPALSE+A+ P K PP +D SPS QG S H P R+G
Sbjct: 33 VIDTTSWPALSEAARNPPK-----------PPPCID-SPSEGQGKQSSRHKPARRGGAGA 80
Query: 208 TKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPN 267
S S PR R S +
Sbjct: 81 DHSPS---------PRDDRATSWDH----------------------------------- 96
Query: 268 MLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGNY 327
R HH +N+ GG RRG FG RG G + + G Y
Sbjct: 97 ---------GRHHHHHNS-------GG--RRGSFGGRRRGGGG---GGFDALYRAPIGPY 135
Query: 328 ANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPVAY------------PDFY 375
R A AP P PP + PPP FL P + PF AP+ + P +Y
Sbjct: 136 V--RGATAPPPPPPPPMAVAPPP-----FL-PPPLRPFAAPLLFHHDMASPVSPVSPIYY 187
Query: 376 YFPTVPLDPFRGMPVFPH---------------MPSPATFFPAAESSLSNVIVNQIDYYF 420
P P + R +P FP P P A ++ QI++YF
Sbjct: 188 VGPPPPPEALRPLPPFPPTMLAPPAYPYYHPQPQPDPEPEPDADPQQHRANLLKQIEFYF 247
Query: 421 SDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLR 480
S NL D FL+ NMD++GWV I LIA F +V+ T ++Q I D++++S+++++Q DK+R
Sbjct: 248 SKDNLCTDVFLRRNMDDQGWVNIALIAGFNKVQESTDDLQYIKDTIQSSSILEMQDDKIR 307
Query: 481 RRN 483
R+N
Sbjct: 308 RQN 310
>dbj|BAC79183.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 595
Score = 110 bits (275), Expect = 1e-22
Identities = 130/469 (27%), Positives = 188/469 (39%), Gaps = 91/469 (19%)
Query: 67 SSSSSSSLTTVDQPPPSDDSPKAAVVSSSPKAVVVSSP----LPAPMEKNSNTIAS-DGG 121
S ++ + T PPP SP ++++ A ++ P P P + S +G
Sbjct: 2 SPAAGGAAPTQLPPPPVAASPSPPPLAAAAAAAAIAGPEGDRAPPPQGNRRDPAGSAEGA 61
Query: 122 DGGNAGGSKKPAWN--KQPLN-------GVAVEIGPVMGAE--SWPALSESAKIPGKLPP 170
D GNA ++K AWN PL GV V G +MG SWPAL+ESA G P
Sbjct: 62 DPGNAA-ARKTAWNVPAPPLAAAAAAGAGVGVPGGGIMGGGPGSWPALAESAAARGSWPK 120
Query: 171 ESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQ-------GSTSNTKSSSMAN-------- 215
+SS + + DGS ++ +I S Q G ++ T S N
Sbjct: 121 SASSDSLK--SLSDGSAPSASEDLIVPSVQPHPVANPISGGSNPTSSPPPPNATVVVTSE 178
Query: 216 -NNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPP----------------PLPPYPVYQ 258
N ++ P+R SG G C +S + T Y
Sbjct: 179 QNGNTDQSNPVRHSSG---GHCAGSNSSRDGNTSDGGDGSWNDGGLGSGSGSNSSYGHGN 235
Query: 259 LPPAVSYPNMLPSI----PDSSPRDHHR----NNNWDARPFVGGS----------SRRGH 300
NM I SS D R NNNW+ GS S R
Sbjct: 236 STNGAGGANMNNIIHSSGTSSSANDSSRRISGNNNWNNNGRSAGSNHNAAGSGDGSNRNL 295
Query: 301 FGSHPR-GDGSYH----QNSYSSRREHDRGNYANTRD--AHAPQPRMPPR-GILRP---- 348
+ ++ R G GS + + + +RR+H+RG + R+ H P P + GI +P
Sbjct: 296 WNNNGRNGGGSSNGFVGRGGHRNRRDHERGGSFSPRNYPRHTPMPPQQQQPGIYQPGPFP 355
Query: 349 ---PPPSTAAFLGPQTIGPFPAPVAYP---DFYYFPTVPLDPFRGMPVFPHMPSPATFFP 402
PPP F+ PQ P+ AYP Y F P++ F+ M + P + P
Sbjct: 356 RPPPPPPPGHFMVPQPFVPYVPHFAYPADVQGYPFYLPPMEQFQNMHLVRPQMQPL-WVP 414
Query: 403 AAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPR 451
+ +L I QI++YFS NL +D FL+ MD++GWV I +I F R
Sbjct: 415 QDQQNLQEDIRTQIEFYFSTNNLCHDTFLRRQMDDQGWVHIDVITKFNR 463
>ref|NP_001014058.1| hypothetical protein LOC310348 [Rattus norvegicus]
gi|51858655|gb|AAH81895.1| Hypothetical LOC310348
[Rattus norvegicus]
Length = 335
Score = 83.6 bits (205), Expect = 2e-14
Identities = 47/125 (37%), Positives = 73/125 (57%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PFP + YY+ D G+ V+P E+ L I QI+
Sbjct: 180 GERTEQPFPTELNTSMMYYY-----DDGTGVQVYP----------VEETLLKEYIKRQIE 224
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 225 YYFSIENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNLNLILEALKDSTEVEIVDE 284
Query: 478 KLRRR 482
K+R++
Sbjct: 285 KMRKK 289
>gb|EAL90306.1| La domain family [Aspergillus fumigatus Af293]
Length = 786
Score = 82.0 bits (201), Expect = 4e-14
Identities = 132/577 (22%), Positives = 226/577 (38%), Gaps = 84/577 (14%)
Query: 3 TTQNNHS--PTSVPSPAPPSAETNNPNFIRKNLPSPWAQVVRGGSGWDTESQSQSPTGIH 60
T+ +NH P + P A ++ P ++ GG G D E+ S P G
Sbjct: 206 TSGDNHQELPKTAPKKKGADATSDGPKDRKR---------ADGGKGRD-ENVSIPPVGDA 255
Query: 61 QSLPSSSSSSSSSLTTVDQPPPSDDSPKAAVVSSSPK----------AVVVSSPLPAPME 110
S P+ + + ++ + K+ V+ K V ++PLP+
Sbjct: 256 SSWPTPQVAQGEEKRKAQEK--TEKTEKSPVIRPHGKEKWMPVPYVPTAVFNTPLPSSAR 313
Query: 111 KNSNT--IASDGGDGGNAG--GSKKPAWNKQPLNGVAVEIGPVMGAESWPALSESAKIPG 166
+ + DG G G+ K A + A + G + P+ + + +P
Sbjct: 314 RGGRAGRVGRDGARNATHGAPGADKAATGQAAQGSTAKQNGVGDRGRNEPSSARANSLPA 373
Query: 167 KLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGSTSNTKSSSMA--NNNLPNRPR- 223
P S+ + A + S +Q + +P+ + + + A N NLP R R
Sbjct: 374 ---PSKRSNSV--DAGLADSRKGTQVADRNRAPKGAENVNGLPAGRQAGGNENLPPRHRG 428
Query: 224 ---PMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMLPSIPDSS---- 276
P R + + S S+P L + ++ + P S+
Sbjct: 429 DAKPFVRNHDAAHKGGDSTSKSSHPLADANTG------LRSSSTHDRRFENGPKSADLAG 482
Query: 277 -PRDHHRNN-NWDARPFVGGSSRRGHFGSHPRGDGSYHQ---NSYSSRRE--HDRGNYAN 329
P D + + ++R G S RG G H GS + N++ H + N
Sbjct: 483 FPGDRKEKDFSRESRADRGRGSHRGR-GGHSGFTGSQNSQFPNNHMGHHSFVHPKSFGFN 541
Query: 330 TRD-AHAPQPRMPPRG----ILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDP 384
R +H P +G + P P++A+ G + PFPA + Y + +P P
Sbjct: 542 ERQRSHHGLPNGSQQGHRMSLRSPSLPNSASMYG---VYPFPADIN--TMYGYQPIPAGP 596
Query: 385 FRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPIT 444
+P P+M SL ++I Q++YYFS NL D FL+ MD +G+VP++
Sbjct: 597 MTAVPYQPYMEP---------FSLMSMISMQLEYYFSVDNLCKDLFLRKQMDSQGFVPLS 647
Query: 445 LIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRNWIDRLTSAQVQADAGSVSPIE 504
+IA F RVK LT + +++ + R ++ L + IDRL V P+E
Sbjct: 648 VIAGFKRVKTLTEDFEMLRHACRQVRNIEY----LTGEDGIDRLRPRDKWEQ--WVLPVE 701
Query: 505 SRDNSFTADFQTITLDKTTKDEGESSRQSQ--LSNGS 539
RD S + +++ D DE ++++ L NGS
Sbjct: 702 QRDPSAQNEGPSLSADAGKFDEQNQAKETTNGLPNGS 738
>gb|AAK93859.2| Hypothetical protein R144.7 [Caenorhabditis elegans]
gi|25152493|ref|NP_498064.2| la related protein (3G102)
[Caenorhabditis elegans]
Length = 1065
Score = 82.0 bits (201), Expect = 4e-14
Identities = 91/397 (22%), Positives = 151/397 (37%), Gaps = 62/397 (15%)
Query: 112 NSNTIASDGGDGGNAGGSKKPAW-----NKQPLN-------------GVAVEIGPVMGAE 153
N + G+ +A G ++ W NK P+N G+ + G G
Sbjct: 234 NDEAVRRRSGEEDSASGDEQQYWSRSKDNKSPINEMSSDRVVDSGSNGIYYQQG---GTH 290
Query: 154 SWP------ALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGS-TS 206
W A S+ P P S S D +P + + + R G+ TS
Sbjct: 291 GWKKKVNNKAGSDMPTPPNSTSPHQSESNSPEHLPKDKAPIMNGNAKNAPAANRNGNNTS 350
Query: 207 NTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYP 266
K+ + N R + Q+ +NP PP L + P
Sbjct: 351 TAKTGDYWHKNGGERKEDKSQPKAYYQRNDRFQAR-ANPHAPPKLTAAQRKERGP----- 404
Query: 267 NMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGN 326
LP D D +N+D + + ++G+ + + + S + + +
Sbjct: 405 --LPRWEDIEAGD----DNFDYMTLMEAQYSQ-YYGAPQQFEHQLDPHQASILIQQAQQH 457
Query: 327 YANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIG-PFPAPVAYPDFYYFPTVPLDPF 385
A+ P P + P ++ PP P + G P + + Y PT P
Sbjct: 458 MASFAPFRPPMPMLSPH-LMSPPLDRDGGVTSPVSNGEPINTAIPFAPIYNPPTAPR--- 513
Query: 386 RGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITL 445
P + +L + QI+YYFS+ NL D FL+ M EG++P+ L
Sbjct: 514 ----------------PVTDDTLKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVAL 557
Query: 446 IANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRR 482
IA+FPRV++LT + LIL+++++S VD+ D L+ R
Sbjct: 558 IASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQIR 594
>pir||T16754 hypothetical protein R144.7 - Caenorhabditis elegans
Length = 1356
Score = 82.0 bits (201), Expect = 4e-14
Identities = 91/397 (22%), Positives = 151/397 (37%), Gaps = 62/397 (15%)
Query: 112 NSNTIASDGGDGGNAGGSKKPAW-----NKQPLN-------------GVAVEIGPVMGAE 153
N + G+ +A G ++ W NK P+N G+ + G G
Sbjct: 234 NDEAVRRRSGEEDSASGDEQQYWSRSKDNKSPINEMSSDRVVDSGSNGIYYQQG---GTH 290
Query: 154 SWP------ALSESAKIPGKLPPESSSSKIAPPAAVDGSPSTSQGPIISHSPQRQGS-TS 206
W A S+ P P S S D +P + + + R G+ TS
Sbjct: 291 GWKKKVNNKAGSDMPTPPNSTSPHQSESNSPEHLPKDKAPIMNGNAKNAPAANRNGNNTS 350
Query: 207 NTKSSSMANNNLPNRPRPMRRISGSNIGPCPAQSSLSNPPTPPPLPPYPVYQLPPAVSYP 266
K+ + N R + Q+ +NP PP L + P
Sbjct: 351 TAKTGDYWHKNGGERKEDKSQPKAYYQRNDRFQAR-ANPHAPPKLTAAQRKERGP----- 404
Query: 267 NMLPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYSSRREHDRGN 326
LP D D +N+D + + ++G+ + + + S + + +
Sbjct: 405 --LPRWEDIEAGD----DNFDYMTLMEAQYSQ-YYGAPQQFEHQLDPHQASILIQQAQQH 457
Query: 327 YANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIG-PFPAPVAYPDFYYFPTVPLDPF 385
A+ P P + P ++ PP P + G P + + Y PT P
Sbjct: 458 MASFAPFRPPMPMLSPH-LMSPPLDRDGGVTSPVSNGEPINTAIPFAPIYNPPTAPR--- 513
Query: 386 RGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITL 445
P + +L + QI+YYFS+ NL D FL+ M EG++P+ L
Sbjct: 514 ----------------PVTDDTLKEYVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVAL 557
Query: 446 IANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRR 482
IA+FPRV++LT + LIL+++++S VD+ D L+ R
Sbjct: 558 IASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQIR 594
>ref|NP_835144.1| La ribonucleoprotein domain family member 2 isoform 2 [Homo
sapiens]
Length = 522
Score = 81.3 bits (199), Expect = 7e-14
Identities = 46/125 (36%), Positives = 72/125 (56%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PF + YY+ D G+ V+P E+ L I QI+
Sbjct: 180 GERTDQPFQTELNTSMMYYY-----DDGTGVQVYP----------VEEALLKEYIKRQIE 224
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 225 YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
Query: 478 KLRRR 482
K+R++
Sbjct: 285 KMRKK 289
>ref|NP_060548.2| La ribonucleoprotein domain family member 2 isoform 1 [Homo
sapiens]
Length = 914
Score = 81.3 bits (199), Expect = 7e-14
Identities = 46/125 (36%), Positives = 72/125 (56%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PF + YY+ D G+ V+P E+ L I QI+
Sbjct: 180 GERTDQPFQTELNTSMMYYY-----DDGTGVQVYP----------VEEALLKEYIKRQIE 224
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 225 YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
Query: 478 KLRRR 482
K+R++
Sbjct: 285 KMRKK 289
>ref|NP_115615.2| La ribonucleoprotein domain family member 2 isoform 3 [Homo
sapiens]
Length = 358
Score = 81.3 bits (199), Expect = 7e-14
Identities = 46/125 (36%), Positives = 72/125 (56%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PF + YY+ D G+ V+P E+ L I QI+
Sbjct: 180 GERTDQPFQTELNTSMMYYY-----DDGTGVQVYP----------VEEALLKEYIKRQIE 224
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 225 YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
Query: 478 KLRRR 482
K+R++
Sbjct: 285 KMRKK 289
>emb|CAH56210.1| hypothetical protein [Homo sapiens]
Length = 329
Score = 81.3 bits (199), Expect = 7e-14
Identities = 46/125 (36%), Positives = 72/125 (56%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PF + YY+ D G+ V+P E+ L I QI+
Sbjct: 180 GERTDQPFQTELNTSMMYYY-----DDGTGVQVYP----------VEEALLKEYIKRQIE 224
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 225 YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
Query: 478 KLRRR 482
K+R++
Sbjct: 285 KMRKK 289
>emb|CAH56379.1| hypothetical protein [Homo sapiens]
Length = 897
Score = 81.3 bits (199), Expect = 7e-14
Identities = 46/125 (36%), Positives = 72/125 (56%), Gaps = 15/125 (12%)
Query: 358 GPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQID 417
G +T PF + YY+ D G+ V+P E+ L I QI+
Sbjct: 163 GERTDQPFQTELNTSMMYYY-----DDGTGVQVYP----------VEEALLKEYIKRQIE 207
Query: 418 YYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGD 477
YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+ LIL+++++S V++ +
Sbjct: 208 YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 267
Query: 478 KLRRR 482
K+R++
Sbjct: 268 KMRKK 272
>gb|AAH25528.1| 1700108L22Rik protein [Mus musculus]
Length = 335
Score = 80.9 bits (198), Expect = 1e-13
Identities = 37/82 (45%), Positives = 59/82 (71%)
Query: 401 FPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQ 460
+P E+ L I QI+YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+
Sbjct: 208 YPVEETLLKEYIKRQIEYYFSTENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNLN 267
Query: 461 LILDSMRNSNVVDVQGDKLRRR 482
LIL+++++S V++ +K+R++
Sbjct: 268 LILEALKDSTEVEIVDEKMRKK 289
>ref|XP_619893.1| PREDICTED: hypothetical protein LOC214048 [Mus musculus]
Length = 632
Score = 80.9 bits (198), Expect = 1e-13
Identities = 37/82 (45%), Positives = 59/82 (71%)
Query: 401 FPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQ 460
+P E+ L I QI+YYFS NL D FL+ MDE+G++PI+LIA F RV+ LT+N+
Sbjct: 505 YPVEETLLKEYIKRQIEYYFSTENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNLN 564
Query: 461 LILDSMRNSNVVDVQGDKLRRR 482
LIL+++++S V++ +K+R++
Sbjct: 565 LILEALKDSTEVEIVDEKMRKK 586
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.309 0.128 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,098,702,470
Number of Sequences: 2540612
Number of extensions: 58002392
Number of successful extensions: 428421
Number of sequences better than 10.0: 7848
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 7819
Number of HSP's that attempted gapping in prelim test: 343630
Number of HSP's gapped (non-prelim): 41953
length of query: 546
length of database: 863,360,394
effective HSP length: 133
effective length of query: 413
effective length of database: 525,458,998
effective search space: 217014566174
effective search space used: 217014566174
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 78 (34.7 bits)
Medicago: description of AC146790.7