Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146790.4 - phase: 0 
         (147 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD14510.1| putative CENP-B/ARS binding protein-like protein ...   138  3e-32
gb|AAB01537.1| ARS binding protein 1                                   64  8e-10
emb|CAB50967.1| abp1 [Schizosaccharomyces pombe] gi|19113252|ref...    63  1e-09
gb|EAL92463.1| DNA binding protein [Aspergillus fumigatus Af293]       63  2e-09
gb|EAL92342.1| DNA binding protein [Aspergillus fumigatus Af293]       62  4e-09
gb|EAL85944.1| DNA binding protein [Aspergillus fumigatus Af293]...    57  9e-08
gb|EAA57942.1| hypothetical protein AN6156.2 [Aspergillus nidula...    54  6e-07
emb|CAA19330.1| SPBC14F5.12c [Schizosaccharomyces pombe] gi|1911...    54  8e-07
gb|EAA66763.1| hypothetical protein AN9495.2 [Aspergillus nidula...    52  4e-06
gb|EAA60266.1| hypothetical protein AN8717.2 [Aspergillus nidula...    52  4e-06
gb|AAT38752.1| hypothetical protein PGEC568H16.8 [Solanum demissum]    51  5e-06
gb|AAT38686.1| hypothetical protein PGEC568D21.5 [Solanum demissum]    49  2e-05
gb|AAU89737.1| hypothetical protein [Solanum tuberosum]                49  3e-05
pir||S20478 hypothetical protein - fruit fly (Drosophila melanog...    47  1e-04
gb|EAL18738.1| hypothetical protein CNBI3240 [Cryptococcus neofo...    44  8e-04
emb|CAG27692.1| tigger transposable element derived 14 [Equus ca...    39  0.020
emb|CAB16408.1| cbh [Schizosaccharomyces pombe] gi|19115495|ref|...    39  0.020
gb|AAH94458.1| Tigd2 protein [Mus musculus]                            39  0.020
gb|AAB80698.1| Cbhp [Schizosaccharomyces pombe]                        39  0.020
ref|XP_144820.3| PREDICTED: tigger transposable element derived ...    39  0.020

>gb|AAD14510.1| putative CENP-B/ARS binding protein-like protein [Arabidopsis
           thaliana] gi|25411247|pir||B84479 hypothetical protein
           At2g06660 [imported] - Arabidopsis thaliana
          Length = 283

 Score =  138 bits (347), Expect = 3e-32
 Identities = 63/75 (84%), Positives = 69/75 (92%)

Query: 1   MTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVR 60
           MTSKIQPCDAGIIRAFKMHYRRRFYR+ILEGYE+GQSDPG INVLDAI+ A+  WTI+VR
Sbjct: 208 MTSKIQPCDAGIIRAFKMHYRRRFYREILEGYELGQSDPGTINVLDAISFAVSAWTINVR 267

Query: 61  KETIANCFRHCKIRS 75
           +ETI NCFRHCKI S
Sbjct: 268 RETILNCFRHCKIHS 282


>gb|AAB01537.1| ARS binding protein 1
          Length = 522

 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 45/143 (31%), Positives = 69/143 (47%), Gaps = 15/143 (10%)

Query: 6   QPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRKETIA 65
           QPC  G+I A K  YR+ + + ILE  E+G++     NVL AI   +  WT D+  E I 
Sbjct: 323 QPCSEGVIYALKASYRKHWVQYILEQNELGRNPYNTTNVLRAILWLVKAWTTDISPEIIE 382

Query: 66  NCFRHCKIRSASDVVGNLDES-----TFDEETQDLQTMINQCGYRNKMDIDNLMNYPGEN 120
           N F      + S V+G  +ES       DE    L+ ++++   +  M I++ ++   EN
Sbjct: 383 NAF------NLSGVLGLFNESAVTSRALDEMIHPLRELVSEFSVQAAMRIEDFISPSEEN 436

Query: 121 EACSEVQSLEDIVCTIIENNAED 143
                V S EDI+  I     +D
Sbjct: 437 ----IVDSSEDIINQIASQYMDD 455


>emb|CAB50967.1| abp1 [Schizosaccharomyces pombe] gi|19113252|ref|NP_596460.1|
           hypothetical protein SPBC1105.04c [Schizosaccharomyces
           pombe 972h-] gi|7490121|pir||T39281 ars binding protein
           1 - fission yeast (Schizosaccharomyces pombe)
           gi|19860259|sp|P49777|ABP1_SCHPO ARS-binding protein 1
          Length = 522

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 45/143 (31%), Positives = 69/143 (47%), Gaps = 15/143 (10%)

Query: 6   QPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRKETIA 65
           QPC  G+I A K  YR+ + + ILE  E+G++     NVL AI   +  WT D+  E I 
Sbjct: 323 QPCSEGVIYALKACYRKHWVQYILEQNELGRNPYNTTNVLRAILWLVKAWTTDISPEIIE 382

Query: 66  NCFRHCKIRSASDVVGNLDES-----TFDEETQDLQTMINQCGYRNKMDIDNLMNYPGEN 120
           N F      + S V+G  +ES       DE    L+ ++++   +  M I++ ++   EN
Sbjct: 383 NAF------NLSGVLGLFNESAVTSRALDEMIHPLRELVSEFSVQAAMRIEDFISPSEEN 436

Query: 121 EACSEVQSLEDIVCTIIENNAED 143
                V S EDI+  I     +D
Sbjct: 437 ----IVDSSEDIINQIASQYMDD 455


>gb|EAL92463.1| DNA binding protein [Aspergillus fumigatus Af293]
          Length = 518

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 37/143 (25%), Positives = 67/143 (45%), Gaps = 2/143 (1%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII  +K +++R + R IL+ +E+ +     +N+L A+   I +W  D+  
Sbjct: 311 TSRYQPLDQGIIHCWKSYWKRYWIRFILQEFELNRDPIASMNILRAVRWGIQSWEFDLSG 370

Query: 62  ETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGENE 121
           + I NCF+   + S       +D +  D+       +      ++ MDID  +N P E  
Sbjct: 371 QVIQNCFQKA-LDSQPSYREPVDPAVLDDIQNAFSLLKLSTPIQDLMDIDTFLN-PAEEA 428

Query: 122 ACSEVQSLEDIVCTIIENNAEDD 144
               ++ +E  +        +DD
Sbjct: 429 VQDTLEDIESQILAQYGPELDDD 451


>gb|EAL92342.1| DNA binding protein [Aspergillus fumigatus Af293]
          Length = 518

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 37/143 (25%), Positives = 66/143 (45%), Gaps = 2/143 (1%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII  +K +++R + R IL+ +E+ +     +N+L A+   I +W  D+  
Sbjct: 311 TSRYQPLDQGIIHCWKSYWKRYWIRFILQEFELNRDPIASMNILRAVRWGIQSWEFDLSG 370

Query: 62  ETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGENE 121
           + I NCF+   + S       +D +  D+       +      ++ MDID  +N P E  
Sbjct: 371 QVIQNCFQKA-LDSQPSYREPVDPAVLDDIQNAFSLLKLSTPIQDLMDIDTFLN-PAEEA 428

Query: 122 ACSEVQSLEDIVCTIIENNAEDD 144
                + +E  +        +DD
Sbjct: 429 VQDTPEDIESQILAQYGPELDDD 451


>gb|EAL85944.1| DNA binding protein [Aspergillus fumigatus Af293]
           gi|66844340|gb|EAL84678.1| DNA binding protein
           [Aspergillus fumigatus Af293]
          Length = 515

 Score = 57.0 bits (136), Expect = 9e-08
 Identities = 33/114 (28%), Positives = 56/114 (48%), Gaps = 1/114 (0%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII  +K +++R +   IL+ +E+       +NVL AI   I +W  D+  
Sbjct: 311 TSRYQPLDQGIIFCWKSYWKRYWIHFILQEFELNHDPIASMNVLRAIRWGIQSWEFDLSG 370

Query: 62  ETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMN 115
           + I NCFR   + S       +D +  D+  +    +      ++ MDI+  +N
Sbjct: 371 QVIQNCFRKA-LYSQPSYQEPVDPAVLDDIEKAFSLLKVSTPIQDLMDINTFLN 423


>gb|EAA57942.1| hypothetical protein AN6156.2 [Aspergillus nidulans FGSC A4]
           gi|67539972|ref|XP_663760.1| hypothetical protein
           AN6156_2 [Aspergillus nidulans FGSC A4]
           gi|49097666|ref|XP_410293.1| hypothetical protein
           AN6156.2 [Aspergillus nidulans FGSC A4]
          Length = 467

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 26/67 (38%), Positives = 37/67 (54%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII+  K++YRR++ R +L  YE        + +LD I   +  W  DV+ 
Sbjct: 259 TSRFQPLDQGIIQNLKIYYRRQWLRYMLSHYERNLDPLQSVTILDCIRWLVRAWHHDVQS 318

Query: 62  ETIANCF 68
            TI  CF
Sbjct: 319 STILACF 325


>emb|CAA19330.1| SPBC14F5.12c [Schizosaccharomyces pombe]
           gi|19113530|ref|NP_596738.1| hypothetical protein
           SPBC14F5.12c [Schizosaccharomyces pombe 972h-]
           gi|7490450|pir||T39458 DNA binding protein - fission
           yeast (Schizosaccharomyces pombe)
           gi|26391975|sp|O60108|CBH2_SCHPO CENP-B homolog protein
           2 (CBHP-2)
          Length = 514

 Score = 53.9 bits (128), Expect = 8e-07
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 5/147 (3%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           T    PC   I+ AFK +YR+ +   +LE   +G++    +NVL A+   I +W +D   
Sbjct: 318 TEIYHPCGQEIVYAFKSYYRKYWLNYMLEEIRLGKNPSKTMNVLKAVRWMIRSWNVDFEP 377

Query: 62  ETIANCF-RHCKIRSASDVVGNLDESTFDEETQDLQTMINQ-CGYRNKMDIDNLMNYPGE 119
             I NCF R    ++   + G   E+       +LQ +I +  G ++   I+N +N   E
Sbjct: 378 SIIYNCFLRSGLFQNQQPLTGPSPETI--RIAVNLQELIGKYLGDKDIFQIENFINPIEE 435

Query: 120 NEACSEVQSLEDIVCTII-ENNAEDDE 145
           N A +    +  +    + E   E DE
Sbjct: 436 NSADTNDDIVNQVAAQFLDEREFETDE 462


>gb|EAA66763.1| hypothetical protein AN9495.2 [Aspergillus nidulans FGSC A4]
           gi|49140522|ref|XP_413632.1| hypothetical protein
           AN9495.2 [Aspergillus nidulans FGSC A4]
          Length = 513

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 37/67 (54%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII+  K++YR+++ R +L  YE        + +LD I   + +W  DV  
Sbjct: 308 TSRYQPLDQGIIQNLKIYYRKQWLRYMLSHYERDLDPLESVTILDCIRWLVRSWHHDVLS 367

Query: 62  ETIANCF 68
            TI  CF
Sbjct: 368 STILACF 374


>gb|EAA60266.1| hypothetical protein AN8717.2 [Aspergillus nidulans FGSC A4]
           gi|67903460|ref|XP_681986.1| hypothetical protein
           AN8717_2 [Aspergillus nidulans FGSC A4]
           gi|49128522|ref|XP_412854.1| hypothetical protein
           AN8717.2 [Aspergillus nidulans FGSC A4]
          Length = 524

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 25/67 (37%), Positives = 37/67 (54%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           TS+ QP D GII+  K++YR+++ R +L  YE        + +LD I   + +W  DV  
Sbjct: 308 TSRYQPLDQGIIQNLKIYYRKQWLRYMLSHYERDLDPLESVTILDCIRWLVRSWHHDVLS 367

Query: 62  ETIANCF 68
            TI  CF
Sbjct: 368 STILACF 374


>gb|AAT38752.1| hypothetical protein PGEC568H16.8 [Solanum demissum]
          Length = 106

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 22/37 (59%), Positives = 32/37 (86%)

Query: 108 MDIDNLMNYPGENEACSEVQSLEDIVCTIIENNAEDD 144
           MD++NL++YPGE++ACSEVQ LE+IV TI + N +D+
Sbjct: 1   MDVNNLLDYPGESDACSEVQRLEEIVDTIGKCNVDDE 37


>gb|AAT38686.1| hypothetical protein PGEC568D21.5 [Solanum demissum]
          Length = 104

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 21/37 (56%), Positives = 31/37 (83%)

Query: 108 MDIDNLMNYPGENEACSEVQSLEDIVCTIIENNAEDD 144
           MD++NL++YPGE++ C EVQSLE+IV TI + N +D+
Sbjct: 1   MDVNNLLDYPGESDTCLEVQSLEEIVDTIGKCNVDDE 37


>gb|AAU89737.1| hypothetical protein [Solanum tuberosum]
          Length = 106

 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 21/36 (58%), Positives = 30/36 (83%)

Query: 108 MDIDNLMNYPGENEACSEVQSLEDIVCTIIENNAED 143
           MD++NL++YPGE++ CSEVQ LE+IV TI + N +D
Sbjct: 1   MDVNNLLDYPGESDTCSEVQRLEEIVDTIGKCNVDD 36


>pir||S20478 hypothetical protein - fruit fly (Drosophila melanogaster)
           transposon pogoR11
          Length = 499

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 14/146 (9%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDP---GKINVLDAINLAIPTWTID 58
           T+ +QP D GII +FK+ YRR   ++ L     G+S       +++LDA+      W  +
Sbjct: 296 TALLQPLDQGIIHSFKLEYRRILVKQQLIAVNCGKSTVEFLKSLSLLDALYFVNQGWK-N 354

Query: 59  VRKETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPG 118
           V+  TI NCF+    + + +    + E        D+ + IN   Y N +D D       
Sbjct: 355 VKMLTIQNCFKKAGFKFSFENEDTIAEKDKQCVEVDIVSNINWNEYAN-VDAD------- 406

Query: 119 ENEACSEVQSLEDIVCTIIENNAEDD 144
             EAC      ++IV +++++    D
Sbjct: 407 --EACHGQLDDDEIVRSLVQDAKTSD 430


>gb|EAL18738.1| hypothetical protein CNBI3240 [Cryptococcus neoformans var.
           neoformans B-3501A] gi|57228776|gb|AAW45211.1|
           hypothetical protein CNH03540 [Cryptococcus neoformans
           var. neoformans JEC21] gi|58270724|ref|XP_572518.1|
           hypothetical protein CNH03540 [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 329

 Score = 43.9 bits (102), Expect = 8e-04
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 1   MTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDP--GKINVLDAINLAIPTWTID 58
           + + +QP DAGII AFK  YR +     L  YE G       K+++  A+ +A  +W  +
Sbjct: 151 LPAHVQPMDAGIISAFKSRYRAKVIPFALANYEDGVPPHLCYKVDIKSAMEMADDSWN-E 209

Query: 59  VRKETIANCFR 69
           +  ET+ NC++
Sbjct: 210 ITGETVENCWK 220


>emb|CAG27692.1| tigger transposable element derived 14 [Equus caballus]
          Length = 524

 Score = 39.3 bits (90), Expect = 0.020
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 2   TSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRK 61
           T+ +QP + GII   K+ YR    ++IL        D GK+++  AI++    W   V++
Sbjct: 308 TAVLQPLNLGIIHTMKVLYRSHLLKQILLKLN-SNEDQGKVDIKQAIDMIAAAWW-SVKQ 365

Query: 62  ETIANCFRHCKI 73
            T+  C++   I
Sbjct: 366 STVVKCWQKAGI 377


>emb|CAB16408.1| cbh [Schizosaccharomyces pombe] gi|19115495|ref|NP_594583.1|
           hypothetical protein SPAC9E9.10c [Schizosaccharomyces
           pombe 972h-] gi|7490220|pir||T39217 centromere k-type
           repeat binding protein Cbhp - fission yeast
           (Schizosaccharomyces pombe)
           gi|12643496|sp|O14423|CBH1_SCHPO CENP-B homolog protein
           1 (CBHP-1)
          Length = 514

 Score = 39.3 bits (90), Expect = 0.020
 Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 1/140 (0%)

Query: 7   PCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRKETIAN 66
           P + GI+  FK +YRR + +  L    + +     +NVL AI   + +W   V ++TI  
Sbjct: 323 PFEQGIVDTFKANYRRYWLQYSLNQINILRDPLKAVNVLKAIRWMLWSWNFGVSEKTIQA 382

Query: 67  CFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGENEACSEV 126
            F    +             ++ +   ++  +I+  G      I+  +    E+E     
Sbjct: 383 SFLRSGLLGPHSEAEGQGMESYQKAIMEIGNLISSKGSEAVKQINEYIRPSEEDETKLHQ 442

Query: 127 QSLEDIVCTIIENNA-EDDE 145
            +++ +    +E    E DE
Sbjct: 443 DAVDTVAAEFLEERRFESDE 462


>gb|AAH94458.1| Tigd2 protein [Mus musculus]
          Length = 504

 Score = 39.3 bits (90), Expect = 0.020
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 1   MTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVR 60
           +TS IQP   G++   K +YR    +K ++     ++    + VLDAI  A   W   +R
Sbjct: 298 VTSLIQPMSQGVLTTVKRYYRAGLIQKYMDEGNDPKTFWKNLTVLDAIYEASRAWN-QIR 356

Query: 61  KETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGEN 120
             TI   ++     +  +   ++DE        +L T++        ++I+N+  +    
Sbjct: 357 SNTITRAWKKLFPGNEENPSVSIDEGAI--LAANLATVLQNTEDCEHVNIENIEQWFDSR 414

Query: 121 EACSEVQSLEDIV 133
            + S  Q L DIV
Sbjct: 415 SSGSNCQVLADIV 427


>gb|AAB80698.1| Cbhp [Schizosaccharomyces pombe]
          Length = 514

 Score = 39.3 bits (90), Expect = 0.020
 Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 1/140 (0%)

Query: 7   PCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVRKETIAN 66
           P + GI+  FK +YRR + +  L    + +     +NVL AI   + +W   V ++TI  
Sbjct: 323 PFEQGIVDTFKANYRRYWLQYSLNQINILRDPLKAVNVLKAIRWMLWSWNFGVSEKTIQA 382

Query: 67  CFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGENEACSEV 126
            F    +             ++ +   ++  +I+  G      I+  +    E+E     
Sbjct: 383 SFLRSGLLGPHSEAEGQGMESYQKAIMEIGNLISSKGSEAVKQINEYIRPSEEDETKLHQ 442

Query: 127 QSLEDIVCTIIENNA-EDDE 145
            +++ +    +E    E DE
Sbjct: 443 DAVDTVAAEFLEERRFESDE 462


>ref|XP_144820.3| PREDICTED: tigger transposable element derived 2 homolog [Mus
           musculus]
          Length = 525

 Score = 39.3 bits (90), Expect = 0.020
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 1   MTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVR 60
           +TS IQP   G++   K +YR    +K ++     ++    + VLDAI  A   W   +R
Sbjct: 319 VTSLIQPMSQGVLTTVKRYYRAGLIQKYMDEGNDPKTFWKNLTVLDAIYEASRAWN-QIR 377

Query: 61  KETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGEN 120
             TI   ++     +  +   ++DE        +L T++        ++I+N+  +    
Sbjct: 378 SNTITRAWKKLFPGNEENPSVSIDEGAI--LAANLATVLQNTEDCEHVNIENIEQWFDSR 435

Query: 121 EACSEVQSLEDIV 133
            + S  Q L DIV
Sbjct: 436 SSGSNCQVLADIV 448


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.319    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,768,972
Number of Sequences: 2540612
Number of extensions: 8903799
Number of successful extensions: 19269
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 19234
Number of HSP's gapped (non-prelim): 97
length of query: 147
length of database: 863,360,394
effective HSP length: 123
effective length of query: 24
effective length of database: 550,865,118
effective search space: 13220762832
effective search space used: 13220762832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)


Medicago: description of AC146790.4