BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146790.10 - phase: 0
(406 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB11667.1| unnamed protein product [Arabidopsis thaliana] 58 5e-07
ref|NP_197653.2| F-box family protein [Arabidopsis thaliana] 58 5e-07
gb|AAM62702.1| unknown [Arabidopsis thaliana] 57 1e-06
dbj|BAB09740.1| heat shock transcription factor HSF30-like prote... 56 2e-06
ref|NP_200175.1| F-box family protein [Arabidopsis thaliana] 56 2e-06
emb|CAE03134.3| OJ000114_01.15 [Oryza sativa (japonica cultivar-... 55 3e-06
ref|NP_198127.1| F-box family protein [Arabidopsis thaliana] 55 4e-06
gb|AAX96380.1| F-box domain, putative [Oryza sativa (japonica cu... 55 4e-06
gb|AAX96379.1| F-box domain, putative [Oryza sativa (japonica cu... 55 4e-06
ref|NP_177121.1| F-box family protein [Arabidopsis thaliana] gi|... 54 9e-06
dbj|BAB11679.1| unnamed protein product [Arabidopsis thaliana] 54 9e-06
ref|NP_197665.2| F-box family protein [Arabidopsis thaliana] 54 9e-06
gb|AAF34429.1| hypothetical protein [Oryza sativa] 53 1e-05
dbj|BAD94200.1| putative protein [Arabidopsis thaliana] 53 2e-05
ref|NP_197379.1| F-box family protein [Arabidopsis thaliana] 53 2e-05
gb|AAX95905.1| F-box domain, putative [Oryza sativa (japonica cu... 53 2e-05
gb|AAT70437.1| At1g51370 [Arabidopsis thaliana] gi|53828607|gb|A... 52 3e-05
ref|NP_974001.1| F-box family protein [Arabidopsis thaliana] 52 3e-05
ref|NP_172001.1| F-box family protein [Arabidopsis thaliana] 52 4e-05
gb|AAC97992.1| T7A14.5 [Arabidopsis thaliana] gi|25406828|pir||H... 52 4e-05
>dbj|BAB11667.1| unnamed protein product [Arabidopsis thaliana]
Length = 502
Score = 58.2 bits (139), Expect = 5e-07
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I SKLPE L++++LS+LPTKD+VRT VLSKRW + W I LDLD + + Y+
Sbjct: 17 EDLI-SKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWL-LIPGLDLDSSEFPH-YDTF 73
Query: 80 CSYCEE 85
+ E
Sbjct: 74 VDFMNE 79
>ref|NP_197653.2| F-box family protein [Arabidopsis thaliana]
Length = 472
Score = 58.2 bits (139), Expect = 5e-07
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I SKLPE L++++LS+LPTKD+VRT VLSKRW + W I LDLD + + Y+
Sbjct: 17 EDLI-SKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWL-LIPGLDLDSSEFPH-YDTF 73
Query: 80 CSYCEE 85
+ E
Sbjct: 74 VDFMNE 79
>gb|AAM62702.1| unknown [Arabidopsis thaliana]
Length = 459
Score = 57.0 bits (136), Expect = 1e-06
Identities = 79/298 (26%), Positives = 129/298 (42%), Gaps = 47/298 (15%)
Query: 25 SKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPLCSYCE 84
S+LPESLI ++L LPTKD V+T VLS RW N W L++ +DL+
Sbjct: 8 SELPESLITQILLCLPTKDSVKTSVLSTRWKNLW------LNVPGLDLT----------- 50
Query: 85 EICTDYCYDYDKYK---LTVCPRCHVCGNHKANLRDAEV-YERRVEIDFES--GMKIESG 138
C+D+ ++ ++Y+ + R + N ++ L+ EV Y+RR F+ G I G
Sbjct: 51 --CSDFPFEDEEYEQVFINFIDR-FLEFNPESRLQTFEVDYKRREIRGFKDRIGTAINRG 107
Query: 139 KKEQQFVN----FVGRALLLTSISSMELERF---SLLINNKRDISLQNTWISSILNRRVK 191
+ V+ + ++ + M L F +L+ RD +L + + S+ +
Sbjct: 108 IRLLDAVSSTMYWEEECIMYPYLEFMPLNLFTSKTLVTLKLRDSALNDPGLVSMPCLKFM 167
Query: 192 ILRIHSSFYQLPFSALTSHYLFNCTSLEELELVLHVSSTIKFPSISVHFGHLKLLK---- 247
ILR + L S C LEEL LV + I ++V + LK
Sbjct: 168 ILREVRWSGTMSLEKLVS----GCPVLEELTLVRTLICDIDDDELAVTRVRSRSLKTFYV 223
Query: 248 --LYGIFFKIDTSSDCLTLNLPLLRKFDIKNCNWSGGKDLIVEAPLLEIVSIEQDIEF 303
YG+ + L ++ P L +K ++ G IV L + IE +I+F
Sbjct: 224 PLAYGVGCRSRVPDKVLEIDAPGLENMTLKEDHFDG----IVVKNLTSLFMIELNIKF 277
>dbj|BAB09740.1| heat shock transcription factor HSF30-like protein [Arabidopsis
thaliana]
Length = 454
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 18 IEEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYN 77
++ED I S+ ESL+ ++L++LPTKDVV+T VLS RW + W + L+LD D S ++N
Sbjct: 19 LKEDRI-SQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWL-LVPSLELDSRDFS-DFN 75
Query: 78 PLCSYCEE-ICTDYCYDYDKYKLTV 101
S+C+ ++ +K KLT+
Sbjct: 76 TFVSFCDRYFDSNRVLCINKLKLTI 100
>ref|NP_200175.1| F-box family protein [Arabidopsis thaliana]
Length = 917
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 18 IEEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYN 77
++ED I S+ ESL+ ++L++LPTKDVV+T VLS RW + W + L+LD D S ++N
Sbjct: 19 LKEDRI-SQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWL-LVPSLELDSRDFS-DFN 75
Query: 78 PLCSYCEE-ICTDYCYDYDKYKLTV 101
S+C+ ++ +K KLT+
Sbjct: 76 TFVSFCDRYFDSNRVLCINKLKLTI 100
>emb|CAE03134.3| OJ000114_01.15 [Oryza sativa (japonica cultivar-group)]
gi|50924504|ref|XP_472612.1| OJ000114_01.15 [Oryza
sativa (japonica cultivar-group)]
Length = 543
Score = 55.5 bits (132), Expect = 3e-06
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 1 MEAGSSKVHKSTQMASVIEEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTS 60
ME S+ K T A+ ED + S+LP+ L++ +LS L + VV+TCVLS+RW + W
Sbjct: 1 MEIEGSRKRKRTPAAAAAAEDRL-SELPDCLLHDILSHLKARQVVQTCVLSRRWRHLW-R 58
Query: 61 SITKLDLD 68
S+ +LD+D
Sbjct: 59 SVPRLDVD 66
>ref|NP_198127.1| F-box family protein [Arabidopsis thaliana]
Length = 459
Score = 55.1 bits (131), Expect = 4e-06
Identities = 79/299 (26%), Positives = 129/299 (42%), Gaps = 49/299 (16%)
Query: 25 SKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPLCSYCE 84
S+LPESLI ++L LPTKD V+T VLS RW N W L++ +DL+
Sbjct: 8 SELPESLITQILLCLPTKDSVKTSVLSTRWKNLW------LNVPGLDLT----------- 50
Query: 85 EICTDYCYDYDKYK---LTVCPRCHVCGNHKANLRDAEV-YERRVEIDFES--GMKIESG 138
C+D+ ++ ++Y+ + R + N ++ L+ EV Y+RR F+ G I G
Sbjct: 51 --CSDFPFEDEEYEQVFINFIDR-FLEFNPESRLQTFEVDYKRREIRGFKDRIGTAINRG 107
Query: 139 KKEQQFVN----FVGRALLLTSISSMELERF---SLLINNKRDISLQNTWISSILNRRVK 191
+ V+ + ++ + M L F +L+ RD +L + + S+ +
Sbjct: 108 IRLLDAVSSTMYWEEECIMYPYLEFMPLNLFTSKTLVTLKLRDSALNDPGLLSMPCLKFM 167
Query: 192 ILRIHSSFYQLPFSALTSHYLFNCTSLEELELV----LHVSSTIKFPSISVHFGHLKLLK 247
ILR + L S C LE+L LV H+ + P V LK
Sbjct: 168 ILREVRWSGTMSLEKLVS----GCPVLEDLTLVRTLICHIDDD-ELPVTRVRSRSLKTFY 222
Query: 248 L---YGIFFKIDTSSDCLTLNLPLLRKFDIKNCNWSGGKDLIVEAPLLEIVSIEQDIEF 303
+ YG+ + L ++ P L +K ++ G IV L + IE +I+F
Sbjct: 223 VPLAYGVGCRSRVPDKVLEIDAPGLENMTLKEDHFDG----IVVKNLTSLFMIELNIKF 277
>gb|AAX96380.1| F-box domain, putative [Oryza sativa (japonica cultivar-group)]
Length = 326
Score = 55.1 bits (131), Expect = 4e-06
Identities = 24/45 (53%), Positives = 36/45 (79%), Gaps = 1/45 (2%)
Query: 27 LPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDID 71
LP+++++ VLSFLP++D VRTCVL+KRW++ W S+T L + D D
Sbjct: 22 LPDTVLHHVLSFLPSQDAVRTCVLAKRWLDLW-KSVTALRIGDRD 65
>gb|AAX96379.1| F-box domain, putative [Oryza sativa (japonica cultivar-group)]
Length = 453
Score = 55.1 bits (131), Expect = 4e-06
Identities = 24/45 (53%), Positives = 36/45 (79%), Gaps = 1/45 (2%)
Query: 27 LPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDID 71
LP+++++ VLSFLP++D VRTCVL+KRW++ W S+T L + D D
Sbjct: 22 LPDTVLHHVLSFLPSQDAVRTCVLAKRWLDLW-KSVTALRIGDRD 65
>ref|NP_177121.1| F-box family protein [Arabidopsis thaliana]
gi|12325183|gb|AAG52534.1| hypothetical protein;
77728-79262 [Arabidopsis thaliana]
gi|25404821|pir||A96718 hypothetical protein T6C23.17
[imported] - Arabidopsis thaliana
gi|10092292|gb|AAG12704.1| hypothetical protein;
7662-9196 [Arabidopsis thaliana]
Length = 451
Score = 53.9 bits (128), Expect = 9e-06
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 25 SKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPLCSYCE 84
SKLP+ L+ VL LPTKDVV+T VLS+RW N W + LDLD+ D +N S+ +
Sbjct: 21 SKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLW-KHVPGLDLDNTDFQ-EFNTFLSFVD 78
>dbj|BAB11679.1| unnamed protein product [Arabidopsis thaliana]
Length = 457
Score = 53.9 bits (128), Expect = 9e-06
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I SKLP+SLI ++L +LP KD+VRT LS RW + W I +LDLD + +YN
Sbjct: 18 EDLI-SKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWL-LIPRLDLDSEEFQ-DYNAF 74
Query: 80 CSYC---------EEICTD 89
+ E+IC D
Sbjct: 75 VGFMNKFIDFSGEEKICLD 93
>ref|NP_197665.2| F-box family protein [Arabidopsis thaliana]
Length = 466
Score = 53.9 bits (128), Expect = 9e-06
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I SKLP+SLI ++L +LP KD+VRT LS RW + W I +LDLD + +YN
Sbjct: 27 EDLI-SKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWL-LIPRLDLDSEEFQ-DYNAF 83
Query: 80 CSYC---------EEICTD 89
+ E+IC D
Sbjct: 84 VGFMNKFIDFSGEEKICLD 102
>gb|AAF34429.1| hypothetical protein [Oryza sativa]
Length = 431
Score = 53.1 bits (126), Expect = 1e-05
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 14 MASVIEEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRW 58
MA EED I+ LP++L+ +LSFLP +D V+TCVLS+RW + W
Sbjct: 1 MAEASEEDGIDV-LPDALLQHILSFLPAEDAVKTCVLSRRWRHLW 44
>dbj|BAD94200.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 52.8 bits (125), Expect = 2e-05
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I S LPE L+ +LSFL TKD VRT VLS RW + W + +LDLD D S + NP
Sbjct: 10 EDRI-SILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWL-WVPRLDLDKSDFS-DDNPS 66
Query: 80 CSYCEE 85
S+ ++
Sbjct: 67 ASFVDK 72
>ref|NP_197379.1| F-box family protein [Arabidopsis thaliana]
Length = 441
Score = 52.8 bits (125), Expect = 2e-05
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPL 79
ED I S LPE L+ +LSFL TKD VRT VLS RW + W + +LDLD D S + NP
Sbjct: 10 EDRI-SILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWL-WVPRLDLDKSDFS-DDNPS 66
Query: 80 CSYCEE 85
S+ ++
Sbjct: 67 ASFVDK 72
>gb|AAX95905.1| F-box domain, putative [Oryza sativa (japonica cultivar-group)]
Length = 419
Score = 52.8 bits (125), Expect = 2e-05
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 25 SKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNPLCSY-- 82
S LP+ L+ +LSF+P+++ V+TCVLS+RW ++W + L ++D+D Y+ L +
Sbjct: 23 SALPDELLQYLLSFIPSREAVQTCVLSQRWRHQW-KYVPALRINDVDSFYSVQQLNKFVH 81
Query: 83 -------------CE-------EICTDYCYDYD----------KYKLTVC--PRCHVCGN 110
CE E+ Y Y + C P + N
Sbjct: 82 HLLLHRKRTPLYVCELDSFRNGEVAEWYQYAVSCEVEMLQVDTAHSADYCRLPEMAITSN 141
Query: 111 HKANLRDAEVYERRVEIDFESGMKIESGKKEQQFVNFVGRALLLTSISSMELERFSLLIN 170
H L + V + +DF +K+E + + + +L S+ S+ + + + +N
Sbjct: 142 HLTTLEFSGVQLGHISLDFSGCLKLE--VLVMRGCKILVQKILSQSVRSLSITQCNFELN 199
Query: 171 NKRDIS 176
+ IS
Sbjct: 200 TRTHIS 205
>gb|AAT70437.1| At1g51370 [Arabidopsis thaliana] gi|53828607|gb|AAU94413.1|
At1g51370 [Arabidopsis thaliana]
gi|42562673|ref|NP_175548.4| F-box family protein
[Arabidopsis thaliana]
Length = 435
Score = 52.0 bits (123), Expect = 3e-05
Identities = 38/93 (40%), Positives = 48/93 (50%), Gaps = 15/93 (16%)
Query: 19 EEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNP 78
EED I S+LPE LI+ +L L TKD VRT LS +W W S+ LDLD S N N
Sbjct: 17 EEDRI-SQLPEPLISEILFHLSTKDSVRTSALSTKWRYLW-QSVPGLDLDPY-ASSNTNT 73
Query: 79 LCSYCE------------EICTDYCYDYDKYKL 99
+ S+ E ++ D Y +DKY L
Sbjct: 74 IVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDL 106
>ref|NP_974001.1| F-box family protein [Arabidopsis thaliana]
Length = 346
Score = 52.0 bits (123), Expect = 3e-05
Identities = 38/93 (40%), Positives = 48/93 (50%), Gaps = 15/93 (16%)
Query: 19 EEDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDIDLSYNYNP 78
EED I S+LPE LI+ +L L TKD VRT LS +W W S+ LDLD S N N
Sbjct: 17 EEDRI-SQLPEPLISEILFHLSTKDSVRTSALSTKWRYLW-QSVPGLDLDPY-ASSNTNT 73
Query: 79 LCSYCE------------EICTDYCYDYDKYKL 99
+ S+ E ++ D Y +DKY L
Sbjct: 74 IVSFVESFFDSHRDSWIRKLRLDLGYHHDKYDL 106
>ref|NP_172001.1| F-box family protein [Arabidopsis thaliana]
Length = 439
Score = 51.6 bits (122), Expect = 4e-05
Identities = 28/52 (53%), Positives = 34/52 (64%), Gaps = 1/52 (1%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDID 71
ED I S LPE L+ +L LPTKDVV T +LSKRW++ WT T DD+D
Sbjct: 12 EDRI-SVLPEDLLVVILDLLPTKDVVATMILSKRWLSIWTMVRTLEYTDDMD 62
>gb|AAC97992.1| T7A14.5 [Arabidopsis thaliana] gi|25406828|pir||H86184 protein
T7A14.5 [imported] - Arabidopsis thaliana
Length = 467
Score = 51.6 bits (122), Expect = 4e-05
Identities = 28/52 (53%), Positives = 34/52 (64%), Gaps = 1/52 (1%)
Query: 20 EDTINSKLPESLINRVLSFLPTKDVVRTCVLSKRWMNRWTSSITKLDLDDID 71
ED I S LPE L+ +L LPTKDVV T +LSKRW++ WT T DD+D
Sbjct: 12 EDRI-SVLPEDLLVVILDLLPTKDVVATMILSKRWLSIWTMVRTLEYTDDMD 62
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 656,312,644
Number of Sequences: 2540612
Number of extensions: 26799623
Number of successful extensions: 78424
Number of sequences better than 10.0: 407
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 77908
Number of HSP's gapped (non-prelim): 548
length of query: 406
length of database: 863,360,394
effective HSP length: 130
effective length of query: 276
effective length of database: 533,080,834
effective search space: 147130310184
effective search space used: 147130310184
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.9 bits)
Medicago: description of AC146790.10