BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146789.8 + phase: 0 /pseudo
(2263 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum] 181 3e-43
gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum] 179 1e-42
gb|AAU90285.1| putative gag/pol polyprotein, 3'-partial [Solanum... 112 2e-22
ref|XP_462905.1| putative gag-pol precursor [Oryza sativa (japon... 94 7e-17
gb|AAL75991.1| putative GAG-POL precursor -orf2 protein [Sorghum... 93 1e-16
gb|AAL75988.1| putative GAG-POL precursor -orf2 protein [Sorghum... 93 1e-16
emb|CAE02216.2| OSJNBb0002N06.6 [Oryza sativa (japonica cultivar... 91 6e-16
emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa (japonica cultiva... 88 3e-15
emb|CAE02527.2| OSJNBb0003A12.14 [Oryza sativa (japonica cultiva... 88 4e-15
ref|XP_474973.1| OSJNBb0015G09.7 [Oryza sativa (japonica cultiva... 88 4e-15
gb|AAD27548.1| polyprotein [Oryza sativa subsp. indica] 88 4e-15
gb|AAP54912.1| gag-pol precursor [Oryza sativa (japonica cultiva... 87 5e-15
ref|XP_475589.1| putative polyprotein [Oryza sativa (japonica cu... 87 5e-15
ref|XP_475120.1| putative polyprotein [Oryza sativa (japonica cu... 87 5e-15
ref|XP_475035.1| OSJNBa0042F21.5 [Oryza sativa (japonica cultiva... 87 5e-15
ref|XP_474845.1| OSJNBa0035O13.3 [Oryza sativa (japonica cultiva... 87 5e-15
ref|XP_473950.1| OSJNBa0053K19.16 [Oryza sativa (japonica cultiv... 87 5e-15
ref|XP_462713.1| OSJNBa0079F16.18 [Oryza sativa (japonica cultiv... 87 5e-15
ref|NP_918192.1| GAG-POL precursor [Oryza sativa (japonica culti... 87 5e-15
ref|NP_918169.1| putative gag-pol polyprotein [Oryza sativa (jap... 87 5e-15
>gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 181 bits (459), Expect = 3e-43
Identities = 85/115 (73%), Positives = 98/115 (84%)
Query: 1699 LSMYTNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGD 1758
++M NG+GAVL+ PKGAHIPF+ARL FD TNN AEYEACIMGIEEAIDLRIK ++IYGD
Sbjct: 1696 VNMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGD 1755
Query: 1759 SALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATV 1813
SALV+NQ+ G W T LIPYRDY RR+LTFF KV L+H+PRDENQMADALAT+
Sbjct: 1756 SALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATL 1810
>gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 179 bits (453), Expect = 1e-42
Identities = 83/115 (72%), Positives = 99/115 (85%)
Query: 1699 LSMYTNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGD 1758
++M NG+GAVL+ PKGAH+PF+ARL FD TNN AEYEACIMGIEEAIDLRIK ++I+GD
Sbjct: 1694 VNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIFGD 1753
Query: 1759 SALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATV 1813
SALV+NQ+ G W T LIPYRDY RR+LTFF KV+L+H+PRDENQMADALAT+
Sbjct: 1754 SALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMADALATL 1808
>gb|AAU90285.1| putative gag/pol polyprotein, 3'-partial [Solanum demissum]
Length = 1784
Score = 112 bits (279), Expect = 2e-22
Identities = 53/109 (48%), Positives = 77/109 (70%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
GIGAVL++ G + P TA+LRF CTNN++EYEACI+G+ A D+ I+ + + GDS L+++
Sbjct: 298 GIGAVLMSESGEYFPITAQLRFYCTNNMSEYEACILGLRLAADMGIQELLVLGDSDLLVH 357
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATV 1813
QI+G+WET LIPY+ + L F ++ HI R N++ADALAT+
Sbjct: 358 QIQGEWETRDPKLIPYQHCLQDLCRRFVSIKFRHISRVHNEIADALATL 406
>ref|XP_462905.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)]
gi|15217332|gb|AAK92670.1| putative gag-pol precursor
[Oryza sativa (japonica cultivar-group)]
Length = 1262
Score = 93.6 bits (231), Expect = 7e-17
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 1705 GIGAVLLTPKGAHIPFT-ARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVI 1763
G G V TP+G I + + L+ +C+NN AEYEA I G+ A+ + +++I +YGDS L++
Sbjct: 759 GAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIV 818
Query: 1764 NQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
QI +E L L+PY ARRL+ F +E+ H+PR N ADALA
Sbjct: 819 QQINDIYEVLKQELVPYYSAARRLMEMFGHIEVMHVPRSRNAPADALA 866
>gb|AAL75991.1| putative GAG-POL precursor -orf2 protein [Sorghum bicolor]
Length = 678
Score = 92.8 bits (229), Expect = 1e-16
Identities = 47/114 (41%), Positives = 72/114 (62%), Gaps = 2/114 (1%)
Query: 1700 SMYTNGIGAVLL--TPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYG 1757
S+ NG GA +L +P + + R+ F +NN+AEYEAC+ GI A++L +K + ++G
Sbjct: 558 SLNINGAGAGILFVSPNKDKLRYVLRILFPASNNVAEYEACLHGIRLAVELGVKRLYVHG 617
Query: 1758 DSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
DSALVINQ+ +W+T H + Y R+ + F +E H+ RD+NQ ADAL+
Sbjct: 618 DSALVINQLNKEWDTTHEKMDLYCKEIRKWKSNFYGIEYIHVVRDKNQAADALS 671
>gb|AAL75988.1| putative GAG-POL precursor -orf2 protein [Sorghum bicolor]
Length = 756
Score = 92.8 bits (229), Expect = 1e-16
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Query: 1700 SMYTNGIGAVLL--TPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYG 1757
S+ NG GA +L +P + + R+ F +NN+AEYEAC+ GI A++L IK + +YG
Sbjct: 288 SLNINGAGAGILFVSPNKDKLRYILRILFPASNNVAEYEACLHGIRLAVELGIKRLYVYG 347
Query: 1758 DSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALATVFNDQ 1817
D ALVINQ+ +W+ H + Y + R+ T F +E H+ RD+NQ ADAL+ + + +
Sbjct: 348 DFALVINQLNKEWDATHEKMDLYCNEIRKWETNFYGIEYIHVVRDKNQAADALSKLGSSR 407
Query: 1818 GE 1819
+
Sbjct: 408 AQ 409
>emb|CAE02216.2| OSJNBb0002N06.6 [Oryza sativa (japonica cultivar-group)]
gi|50923345|ref|XP_472033.1| OSJNBb0002N06.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1607
Score = 90.5 bits (223), Expect = 6e-16
Identities = 47/116 (40%), Positives = 68/116 (58%)
Query: 1696 LMGLSMYTNGIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEI 1755
L G GI AVL +PKG I +TARL+FD TNN AEYEA ++G+ +A L ++ + I
Sbjct: 1244 LQGAKTRGAGIAAVLFSPKGVPIRYTARLQFDTTNNAAEYEAVLLGLRKAKALGVRRLLI 1303
Query: 1756 YGDSALVINQIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
DS LV + +E G+ Y + R + F + + H+P+D+N+ ADALA
Sbjct: 1304 RTDSKLVAGHVDKSFEAKEEGMKRYLEAVRSMEKCFTGITVEHLPKDQNEEADALA 1359
>emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa (japonica cultivar-group)]
gi|50922071|ref|XP_471396.1| OSJNBa0013A04.10 [Oryza
sativa (japonica cultivar-group)]
Length = 1230
Score = 88.2 bits (217), Expect = 3e-15
Identities = 42/107 (39%), Positives = 65/107 (60%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G+G VL++P G + + + F ++N+AEYEA + G+ AI L I+ + + GDS LV+N
Sbjct: 1095 GVGVVLISPTGERLSYILWIHFSASHNVAEYEALLHGLRIAISLGIRRLIVRGDSQLVVN 1154
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L +I YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1155 QVMKEWSCLDDNMIAYRQEVRKLEDKFDGLELTHVLRHNNEAADRLA 1201
>emb|CAE02527.2| OSJNBb0003A12.14 [Oryza sativa (japonica cultivar-group)]
gi|50930357|ref|XP_474706.1| OSJNBb0003A12.14 [Oryza
sativa (japonica cultivar-group)]
Length = 1863
Score = 87.8 bits (216), Expect = 4e-15
Identities = 43/107 (40%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++NIAEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1303 GAGVVLISPTGERLSYVLWIHFSASHNIAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1362
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1363 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1409
>ref|XP_474973.1| OSJNBb0015G09.7 [Oryza sativa (japonica cultivar-group)]
gi|38346888|emb|CAE03913.2| OSJNBb0015G09.7 [Oryza sativa
(japonica cultivar-group)]
Length = 1991
Score = 87.8 bits (216), Expect = 4e-15
Identities = 42/107 (39%), Positives = 65/107 (60%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK++ + GDS LV+N
Sbjct: 1431 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVN 1490
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1491 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1537
>gb|AAD27548.1| polyprotein [Oryza sativa subsp. indica]
Length = 829
Score = 87.8 bits (216), Expect = 4e-15
Identities = 43/107 (40%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++NIAEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 269 GAGVVLISPTGERLSYVLWIHFSASHNIAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 328
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 329 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 375
>gb|AAP54912.1| gag-pol precursor [Oryza sativa (japonica cultivar-group)]
gi|37536646|ref|NP_922625.1| gag-pol precursor [Oryza
sativa (japonica cultivar-group)]
gi|13876521|gb|AAK43497.1| gag-pol precursor [Oryza
sativa (japonica cultivar-group)]
Length = 2017
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1457 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1516
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1517 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1563
>ref|XP_475589.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46485807|gb|AAS98432.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
gi|46391121|gb|AAS90648.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 2000
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1440 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1499
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1500 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1546
>ref|XP_475120.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
gi|46063437|gb|AAS79740.1| putative polyprotein [Oryza
sativa (japonica cultivar-group)]
Length = 1756
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1196 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1255
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1256 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1302
>ref|XP_475035.1| OSJNBa0042F21.5 [Oryza sativa (japonica cultivar-group)]
gi|38347303|emb|CAE02298.2| OSJNBa0042F21.5 [Oryza sativa
(japonica cultivar-group)]
Length = 1950
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1390 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1449
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1450 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1496
>ref|XP_474845.1| OSJNBa0035O13.3 [Oryza sativa (japonica cultivar-group)]
gi|21741410|emb|CAD40114.1| OSJNBa0035O13.3 [Oryza sativa
(japonica cultivar-group)]
Length = 2008
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1448 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1507
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1508 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1554
>ref|XP_473950.1| OSJNBa0053K19.16 [Oryza sativa (japonica cultivar-group)]
gi|38344177|emb|CAE03508.2| OSJNBa0053K19.16 [Oryza
sativa (japonica cultivar-group)]
Length = 2010
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1450 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1509
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1510 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1556
>ref|XP_462713.1| OSJNBa0079F16.18 [Oryza sativa (japonica cultivar-group)]
gi|39546270|emb|CAD39817.3| OSJNBa0079F16.18 [Oryza
sativa (japonica cultivar-group)]
gi|32487832|emb|CAE05063.1| OSJNBa0094P09.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1802
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1457 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1516
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1517 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1563
>ref|NP_918192.1| GAG-POL precursor [Oryza sativa (japonica cultivar-group)]
Length = 1032
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 472 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 531
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 532 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 578
>ref|NP_918169.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 2012
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/107 (39%), Positives = 64/107 (59%)
Query: 1705 GIGAVLLTPKGAHIPFTARLRFDCTNNIAEYEACIMGIEEAIDLRIKNIEIYGDSALVIN 1764
G G VL++P G + + + F ++N+AEYEA + G+ AI L IK + + GDS LV+N
Sbjct: 1452 GAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVN 1511
Query: 1765 QIKGKWETLHAGLIPYRDYARRLLTFFNKVELHHIPRDENQMADALA 1811
Q+ +W L ++ YR R+L F+ +EL H+ R N+ AD LA
Sbjct: 1512 QVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLA 1558
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.357 0.157 0.557
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,117,834,948
Number of Sequences: 2540612
Number of extensions: 112734953
Number of successful extensions: 1091503
Number of sequences better than 10.0: 4228
Number of HSP's better than 10.0 without gapping: 3486
Number of HSP's successfully gapped in prelim test: 843
Number of HSP's that attempted gapping in prelim test: 697506
Number of HSP's gapped (non-prelim): 101515
length of query: 2263
length of database: 863,360,394
effective HSP length: 144
effective length of query: 2119
effective length of database: 497,512,266
effective search space: 1054228491654
effective search space used: 1054228491654
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 84 (37.0 bits)
Medicago: description of AC146789.8