BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146777.12 + phase: 0
(238 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43126.1| putative ATP-dependent protease proteolytic subu... 377 e-103
emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa (japonica cultivar... 309 4e-83
ref|XP_466917.1| unknown protein [Oryza sativa (japonica cultiva... 295 9e-79
ref|YP_033421.1| ATP-dependent clp protease proteolytic subunit ... 278 9e-74
emb|CAF26003.1| ATP-dependent clp protease proteolytic subunit [... 276 3e-73
ref|YP_221817.1| ClpP, ATP-dependent Clp protease, proteolytic s... 274 1e-72
gb|AAN30029.1| ATP-dependent Clp protease, proteolytic subunit C... 274 2e-72
gb|AAL52055.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [B... 270 2e-71
sp|Q8YHC8|CLPP_BRUME ATP-dependent Clp protease proteolytic subu... 270 2e-71
ref|ZP_00269203.1| COG0740: Protease subunit of ATP-dependent Cl... 270 3e-71
ref|ZP_00054776.1| COG0740: Protease subunit of ATP-dependent Cl... 266 5e-70
ref|ZP_00194400.2| COG0740: Protease subunit of ATP-dependent Cl... 265 8e-70
ref|ZP_00210362.1| COG0740: Protease subunit of ATP-dependent Cl... 263 4e-69
emb|CAA09090.1| endopeptidase clp [Caulobacter vibrioides] gi|13... 261 1e-68
sp|O87706|CLPP_CAUCR ATP-dependent Clp protease proteolytic subu... 261 1e-68
ref|YP_180069.1| ATP-dependent Clp protease proteolytic subunit ... 260 2e-68
ref|NP_771584.1| ATP-dependent Clp protease proteolytic subunit ... 260 2e-68
ref|NP_948302.1| ATP-dependent Clp protease proteolytic subunit ... 259 4e-68
ref|NP_531951.1| ATP-dependent Clp protease, proteolytic subunit... 259 4e-68
emb|CAI27649.1| ATP-dependent CLP protease proteolytic subunit [... 259 4e-68
>dbj|BAC43126.1| putative ATP-dependent protease proteolytic subunit ClpP
[Arabidopsis thaliana] gi|9759372|dbj|BAB09831.1|
ATP-dependent protease proteolytic subunit ClpP-like
protein [Arabidopsis thaliana]
gi|28950803|gb|AAO63325.1| At5g23140 [Arabidopsis
thaliana] gi|18420643|ref|NP_568427.1| ATP-dependent Clp
protease proteolytic subunit, putative [Arabidopsis
thaliana]
Length = 241
Score = 377 bits (969), Expect = e-103
Identities = 193/241 (80%), Positives = 211/241 (87%), Gaps = 4/241 (1%)
Query: 1 MRGLFGITKTLFNGTKSSFSPC---RNRAYSLIPMVIETSSRGERAYDIFSRLLKERIVC 57
MRGL K L + T SS + R+YSLIPMVIE SSRGERAYDIFSRLLKERI+C
Sbjct: 2 MRGLVSGAKML-SSTPSSMATSIATGRRSYSLIPMVIEHSSRGERAYDIFSRLLKERIIC 60
Query: 58 INGPISDDTAHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTI 117
INGPI+DDT+HVVVAQLL+LESENPSKPI+MYLNSPGG VTAGLAIYDTMQYIRSPI+TI
Sbjct: 61 INGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTI 120
Query: 118 CLGQAASMGSLLLCAGAKGQRRALPNATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALN 177
CLGQAASM SLLL AGAKGQRR+LPNAT+MIHQPSGGYSGQAKDI IHTKQIVR+WDALN
Sbjct: 121 CLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALN 180
Query: 178 ELYVKHTGQPLDVIQKNMDRDYFMTAEEAKEFGIIDEVIDQRPMTLVSDAVADEGKDKGS 237
ELYVKHTGQPLDV+ NMDRD+FMT EEAK FGIIDEVID+RP+ LV DAV +E KDK S
Sbjct: 181 ELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDAVGNESKDKSS 240
Query: 238 N 238
+
Sbjct: 241 S 241
>emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa (japonica cultivar-group)]
gi|50926576|ref|XP_473235.1| OSJNBa0038O10.7 [Oryza
sativa (japonica cultivar-group)]
Length = 259
Score = 309 bits (792), Expect = 4e-83
Identities = 148/209 (70%), Positives = 182/209 (86%)
Query: 23 RNRAYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENP 82
+ R Y L+PMVIE +SRGERAYDIFSRLLKERIVCI+GPI+DDTA +VVAQLLFLESENP
Sbjct: 30 QRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENP 89
Query: 83 SKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALP 142
+KP+++Y+NSPGG VTAGLAIYDTMQYIRSP+ T+C+GQAASM SLLL AGA+G+RRALP
Sbjct: 90 AKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALP 149
Query: 143 NATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMT 202
NA +MIHQPSGG SGQA DIAIH K+I+++ D LN++Y KHT Q +D I++ M+RD FM
Sbjct: 150 NARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMD 209
Query: 203 AEEAKEFGIIDEVIDQRPMTLVSDAVADE 231
EEA ++G+IDEVI+ RP++LVSDAV +
Sbjct: 210 PEEAHDWGLIDEVIEHRPVSLVSDAVGSD 238
>ref|XP_466917.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|49388184|dbj|BAD25310.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 298
Score = 295 bits (754), Expect = 9e-79
Identities = 140/203 (68%), Positives = 177/203 (86%)
Query: 24 NRAYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPS 83
++A+ L+PMVIET+SRGERAYDIFSRLLKERIV I+GPI+D+TA +VVAQLLFLESENP
Sbjct: 68 HQAFGLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPL 127
Query: 84 KPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPN 143
KP+++Y+NSPGG VTAGLAIYDTMQYIR P+ T+C+GQAASMGSLLL AGA+G+RRALPN
Sbjct: 128 KPVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPN 187
Query: 144 ATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTA 203
A +MIHQPSGG GQA DIAI K+I+++ D LN++Y KHTGQ +D I++ M+RD FM
Sbjct: 188 ARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDP 247
Query: 204 EEAKEFGIIDEVIDQRPMTLVSD 226
EEA+++G+IDEVI+ RP +L+ +
Sbjct: 248 EEARDWGLIDEVIENRPASLIPE 270
>ref|YP_033421.1| ATP-dependent clp protease proteolytic subunit [Bartonella henselae
str. Houston-1] gi|49238186|emb|CAF27396.1|
ATP-dependent clp protease proteolytic subunit
[Bartonella henselae str. Houston-1]
gi|67460276|sp|Q6G3Z3|CLPP_BARHE ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 210
Score = 278 bits (711), Expect = 9e-74
Identities = 132/197 (67%), Positives = 164/197 (83%)
Query: 26 AYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKP 85
A SL+PMVIE ++RGERAYDIFSRLLKERI+ INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKE 67
Query: 86 INMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNAT 145
I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGAKG R LPNA
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 146 IMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEE 205
IM+HQPSGG+ GQA DI H + I++M LNE+YV+HTGQ DVI++ +DRD+FMTAEE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRDHFMTAEE 187
Query: 206 AKEFGIIDEVIDQRPMT 222
AK+FG++D+VI R T
Sbjct: 188 AKQFGLVDDVIQYRAET 204
>emb|CAF26003.1| ATP-dependent clp protease proteolytic subunit [Bartonella quintana
str. Toulouse] gi|67460275|sp|Q6G178|CLPP_BARQU
ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) gi|49474139|ref|YP_032181.1|
ATP-dependent clp protease proteolytic subunit
[Bartonella quintana str. Toulouse]
Length = 210
Score = 276 bits (707), Expect = 3e-73
Identities = 131/197 (66%), Positives = 164/197 (82%)
Query: 26 AYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKP 85
A SL+PMVIE ++RGERAYDIFSRLLKERI+ INGP+ D A +V AQLLFLE+ENP K
Sbjct: 8 ALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLEAENPKKE 67
Query: 86 INMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNAT 145
I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGAKG R LPNA
Sbjct: 68 ISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNAR 127
Query: 146 IMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEE 205
IM+HQPSGG+ GQA DI H + I++M LNE+YV+HTGQ +VI++ +DRD+FMTAEE
Sbjct: 128 IMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRDHFMTAEE 187
Query: 206 AKEFGIIDEVIDQRPMT 222
AK+FG++D+VI R T
Sbjct: 188 AKQFGLVDDVIQYRAET 204
>ref|YP_221817.1| ClpP, ATP-dependent Clp protease, proteolytic subunit ClpP
[Brucella abortus biovar 1 str. 9-941]
gi|62196156|gb|AAX74456.1| ClpP, ATP-dependent Clp
protease, proteolytic subunit ClpP [Brucella abortus
biovar 1 str. 9-941] gi|6942106|gb|AAF32318.1| ClpP
[Brucella melitensis biovar Abortus]
gi|18203228|sp|Q9L7X6|CLPP_BRUAB ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 209
Score = 274 bits (701), Expect = 1e-72
Identities = 131/206 (63%), Positives = 166/206 (79%), Gaps = 6/206 (2%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ +NGP+ D + +V AQLLFLE+ENP K IN
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGA G R ALPNA IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI H + I++M LNE+YVKHTG+ D I++ +DRD+FMTA+EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 208 EFGIIDEVIDQRPMTLVSDAVADEGK 233
EFG+ID+V++ R D ADE K
Sbjct: 190 EFGLIDKVVEAR------DVSADESK 209
>gb|AAN30029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
1330] gi|23501987|ref|NP_698114.1| ATP-dependent Clp
protease, proteolytic subunit ClpP [Brucella suis 1330]
gi|38257636|sp|Q8G0I4|CLPP_BRUSU ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 209
Score = 274 bits (700), Expect = 2e-72
Identities = 131/206 (63%), Positives = 166/206 (79%), Gaps = 6/206 (2%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ +NGP+ D + +V AQLLFLE+ENP K IN
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGA G R ALPNA IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIM 129
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI H + I++M LNE+YVKHTG+ D I++ +DRD+FMTA+EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 208 EFGIIDEVIDQRPMTLVSDAVADEGK 233
EFG+ID+V++ V D ADE K
Sbjct: 190 EFGLIDKVVE------VRDVSADESK 209
>gb|AAL52055.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [Brucella melitensis
16M] gi|17987157|ref|NP_539791.1| ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC SUBUNIT [Brucella melitensis 16M]
gi|25289873|pir||AD3361 endopeptidase Clp (EC 3.4.21.92)
[imported] - Brucella melitensis (strain 16M)
Length = 247
Score = 270 bits (691), Expect = 2e-71
Identities = 130/206 (63%), Positives = 165/206 (79%), Gaps = 6/206 (2%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ +NGP+ D + +V AQLLFLE+ENP K IN
Sbjct: 48 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 107
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGA G R AL NA IM
Sbjct: 108 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIM 167
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI H + I++M LNE+YVKHTG+ D I++ +DRD+FMTA+EA
Sbjct: 168 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 227
Query: 208 EFGIIDEVIDQRPMTLVSDAVADEGK 233
EFG+ID+V++ R D ADE K
Sbjct: 228 EFGLIDKVVEAR------DVSADESK 247
>sp|Q8YHC8|CLPP_BRUME ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
Length = 209
Score = 270 bits (691), Expect = 2e-71
Identities = 130/206 (63%), Positives = 165/206 (79%), Gaps = 6/206 (2%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ +NGP+ D + +V AQLLFLE+ENP K IN
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKEIN 69
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAASMGSLLL AGA G R AL NA IM
Sbjct: 70 MYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIM 129
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI H + I++M LNE+YVKHTG+ D I++ +DRD+FMTA+EA
Sbjct: 130 VHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEAL 189
Query: 208 EFGIIDEVIDQRPMTLVSDAVADEGK 233
EFG+ID+V++ R D ADE K
Sbjct: 190 EFGLIDKVVEAR------DVSADESK 209
>ref|ZP_00269203.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Rhodospirillum rubrum]
Length = 216
Score = 270 bits (689), Expect = 3e-71
Identities = 128/211 (60%), Positives = 169/211 (79%), Gaps = 7/211 (3%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGER+YDI+SRLLKERI+ + G + D A ++ AQLLFLESENPSK I+
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVHDGVASLICAQLLFLESENPSKDIS 72
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
Y+NSPGG VT+G+AIYDTMQYIRSP++T+C+GQAASMGSLLLCAG G+R A PNA IM
Sbjct: 73 FYINSPGGVVTSGMAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEAGKRYATPNARIM 132
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
IHQPSGG+ GQA DI I ++I+ + + LN +YVKHTGQPL+ I++ MDRD +MTAEE++
Sbjct: 133 IHQPSGGFQGQAADIEIQAREILALRERLNRIYVKHTGQPLETIERAMDRDNYMTAEESR 192
Query: 208 EFGIIDEVIDQRPMTLVSDAVADEGKDKGSN 238
FG+ D VI++R A++D+G K S+
Sbjct: 193 AFGLTDSVIERR-------ALSDDGDTKSSS 216
>ref|ZP_00054776.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Magnetospirillum magnetotacticum MS-1]
Length = 213
Score = 266 bits (679), Expect = 5e-70
Identities = 126/194 (64%), Positives = 163/194 (83%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGER+YDI+SRLLKERIV + G + D+ A ++ AQLLFLESENPSK I+
Sbjct: 13 TLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVYDEVASLICAQLLFLESENPSKDIS 72
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
Y+NSPGG VT+GLAIYDTMQYIR ++T+C+GQAASMGSLL+ AG KG+R +LPN+ IM
Sbjct: 73 FYINSPGGVVTSGLAIYDTMQYIRPAVSTLCIGQAASMGSLLMTAGEKGKRFSLPNSRIM 132
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG GQA DI I ++I+ + LN +YV HTGQPL+VI+K M+RD FMTAEEAK
Sbjct: 133 VHQPSGGAQGQATDIEIQAREILALRARLNNIYVDHTGQPLEVIEKVMERDKFMTAEEAK 192
Query: 208 EFGIIDEVIDQRPM 221
EFG+IDEV+++RP+
Sbjct: 193 EFGLIDEVVNKRPV 206
>ref|ZP_00194400.2| COG0740: Protease subunit of ATP-dependent Clp proteases
[Mesorhizobium sp. BNC1]
Length = 219
Score = 265 bits (677), Expect = 8e-70
Identities = 128/213 (60%), Positives = 165/213 (77%), Gaps = 8/213 (3%)
Query: 10 TLFNGTKSSFSPCRN---RAYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDT 66
T F GT P +N A +L+PMV+E ++RGERAYDIFSRLLKERI+ I GP+ D
Sbjct: 3 TSFEGT-----PMKNPVETAMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGM 57
Query: 67 AHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMG 126
A +V AQLLFLE+ENP K I +Y+NSPGG VT+G+AIYDTMQ+I+ P++T+C+GQAASMG
Sbjct: 58 ATLVCAQLLFLEAENPKKEIALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMG 117
Query: 127 SLLLCAGAKGQRRALPNATIMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQ 186
SLLLCAG K R A PNA +M+HQPSGG+ GQA DI H + I+++ LNE+YVKHTGQ
Sbjct: 118 SLLLCAGHKDMRFATPNARVMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQ 177
Query: 187 PLDVIQKNMDRDYFMTAEEAKEFGIIDEVIDQR 219
D I++ +DRD+FMTA+EA+ FG++D VI +R
Sbjct: 178 DYDTIERTLDRDHFMTADEAQAFGLVDRVISER 210
>ref|ZP_00210362.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Ehrlichia
canis str. Jake]
Length = 200
Score = 263 bits (671), Expect = 4e-69
Identities = 128/192 (66%), Positives = 158/192 (81%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E +SRGERAYDI+SRLLKERI+ I GPI D A +VVAQL+FLE+ENP K I
Sbjct: 2 TLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEIC 61
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VTAGL+IYDTMQYI+ ++T+CLGQAASMGSLLL AG G R ALPN+ IM
Sbjct: 62 MYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIM 121
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
IHQPSGG+ GQA DI IH K+I+ + LN++YVKHTG+ L + NM+RD FM AE+AK
Sbjct: 122 IHQPSGGFQGQATDIEIHAKEILDIKSRLNDIYVKHTGRDLPEVVANMERDNFMRAEKAK 181
Query: 208 EFGIIDEVIDQR 219
+FGIID+VI++R
Sbjct: 182 DFGIIDKVIEKR 193
>emb|CAA09090.1| endopeptidase clp [Caulobacter vibrioides]
gi|13423424|gb|AAK23938.1| ATP-dependent Clp protease,
proteolytic subunit [Caulobacter crescentus CB15]
gi|16126206|ref|NP_420770.1| ATP-dependent Clp protease,
proteolytic subunit [Caulobacter crescentus CB15]
gi|25289843|pir||F87492 ATP-dependent Clp proteinase,
proteolytic subunit [imported] - Caulobacter crescentus
Length = 210
Score = 261 bits (667), Expect = 1e-68
Identities = 122/194 (62%), Positives = 157/194 (80%)
Query: 26 AYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKP 85
A +L+PMV+E +SRGERA+DIFSRLLKERI+ + GP+ D A ++ AQLLFLESENP K
Sbjct: 9 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 68
Query: 86 INMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNAT 145
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLL AGA GQR +LPNA
Sbjct: 69 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 128
Query: 146 IMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEE 205
IM+HQPSGG+ GQA DI H + I++ LNE+YVKH G+ + +++ +DRD+FM+A+E
Sbjct: 129 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 188
Query: 206 AKEFGIIDEVIDQR 219
AK +G++D V D R
Sbjct: 189 AKAWGLVDHVYDSR 202
>sp|O87706|CLPP_CAUCR ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
Length = 209
Score = 261 bits (667), Expect = 1e-68
Identities = 122/194 (62%), Positives = 157/194 (80%)
Query: 26 AYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKP 85
A +L+PMV+E +SRGERA+DIFSRLLKERI+ + GP+ D A ++ AQLLFLESENP K
Sbjct: 8 AMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESENPKKE 67
Query: 86 INMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNAT 145
I MY+NSPGG VTAGLAIYDTMQYI+SP++T+C+G AASMGSLLL AGA GQR +LPNA
Sbjct: 68 IAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRISLPNAR 127
Query: 146 IMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEE 205
IM+HQPSGG+ GQA DI H + I++ LNE+YVKH G+ + +++ +DRD+FM+A+E
Sbjct: 128 IMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHFMSADE 187
Query: 206 AKEFGIIDEVIDQR 219
AK +G++D V D R
Sbjct: 188 AKAWGLVDHVYDSR 201
>ref|YP_180069.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417492|emb|CAI26696.1| ATP-dependent CLP protease
proteolytic subunit [Ehrlichia ruminantium str.
Welgevonden] gi|57161012|emb|CAH57918.1| ATP-dependent
Clp protease proteolytic subunit [Ehrlichia ruminantium
str. Welgevonden] gi|58578866|ref|YP_197078.1|
ATP-dependent CLP protease proteolytic subunit
[Ehrlichia ruminantium str. Welgevonden]
gi|67460160|sp|Q5HBX5|CLPP_EHRRW ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 198
Score = 260 bits (665), Expect = 2e-68
Identities = 126/192 (65%), Positives = 158/192 (81%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E +SRGERAYDI+SRLLKERI+ I GPI D A +VVAQL+FLE+ENP K I+
Sbjct: 2 TLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDIS 61
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VTAGL+IYDTMQY++ I T+CLGQAASMGSLLL AG KG R ALPN+ IM
Sbjct: 62 MYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRIM 121
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
IHQPSGG+ GQA DI IH K+I+ + LN +YVKHTG+ L + +M+RD FM+A+ A+
Sbjct: 122 IHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSAQ 181
Query: 208 EFGIIDEVIDQR 219
+FGIID+VI++R
Sbjct: 182 DFGIIDKVIEKR 193
>ref|NP_771584.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110] gi|67460543|sp|Q89KG1|CLPP2_BRAJA
ATP-dependent Clp protease proteolytic subunit 2
(Endopeptidase Clp 2) gi|27353209|dbj|BAC50209.1|
ATP-dependent Clp protease proteolytic subunit
[Bradyrhizobium japonicum USDA 110]
Length = 211
Score = 260 bits (665), Expect = 2e-68
Identities = 122/192 (63%), Positives = 157/192 (81%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ + GP+ D + +VVAQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLEAENPKKEIS 69
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL AG K R +LPNA IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMRFSLPNARIM 129
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI +H ++I+ + LNE+YVKHTGQ I+ ++RD F+TA +AK
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERDKFLTANDAK 189
Query: 208 EFGIIDEVIDQR 219
EFG++D VID+R
Sbjct: 190 EFGLVDRVIDKR 201
>ref|NP_948302.1| ATP-dependent Clp protease proteolytic subunit [Rhodopseudomonas
palustris CGA009] gi|39649880|emb|CAE28402.1|
ATP-dependent Clp protease proteolytic subunit
[Rhodopseudomonas palustris CGA009]
gi|67460293|sp|Q6N5L3|CLPP_RHOPA ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 212
Score = 259 bits (662), Expect = 4e-68
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E ++RGERAYDIFSRLLKERI+ + GP+ D + ++VAQLLFLE+ENP K I+
Sbjct: 10 NLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLEAENPKKEIS 69
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VT+GLAIYDTMQ+IR P++T+C GQAASMGSLLL AG K R +LPNA IM
Sbjct: 70 MYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMRFSLPNARIM 129
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
+HQPSGG+ GQA DI +H ++I+ + LNE+YV HTGQ I+ ++RD F+TAE A+
Sbjct: 130 VHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERDKFLTAEMAR 189
Query: 208 EFGIIDEVIDQRP 220
EFGI+D+VI++RP
Sbjct: 190 EFGIVDKVIEKRP 202
>ref|NP_531951.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
tumefaciens str. C58] gi|17739665|gb|AAL42267.1|
ATP-dependent Clp protease, proteolytic subunit
[Agrobacterium tumefaciens str. C58]
gi|15156306|gb|AAK87054.1| AGR_C_2324p [Agrobacterium
tumefaciens str. C58] gi|15888588|ref|NP_354269.1|
hypothetical protein AGR_C_2324 [Agrobacterium
tumefaciens str. C58] gi|25289867|pir||AE2731
ATP-dependent Clp proteinase, proteolytic subunit clpP
[imported] - Agrobacterium tumefaciens (strain C58,
Dupont) gi|25289865|pir||E97512 clpp (AF218420)
[imported] - Agrobacterium tumefaciens (strain C58,
Cereon) gi|21759066|sp|Q8UFY6|CLPP2_AGRT5 ATP-dependent
Clp protease proteolytic subunit 2 (Endopeptidase Clp 2)
Length = 210
Score = 259 bits (662), Expect = 4e-68
Identities = 120/194 (61%), Positives = 158/194 (80%)
Query: 26 AYSLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKP 85
A +L+PMV+E ++RGER+YDIFSRLLKERI+ + GP+ D A +V AQLLFLE+ENP K
Sbjct: 8 AMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLEAENPKKE 67
Query: 86 INMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNAT 145
I +Y+NSPGG VTAG+AIYDTMQ+IR ++T+C+GQAASMGSLLL AG KG R A PNA
Sbjct: 68 IALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMRFATPNAR 127
Query: 146 IMIHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEE 205
IM+HQPSGG+ GQA DI H + I++M LNE+YVKHTG+ L+ ++K +DRD+FM A+E
Sbjct: 128 IMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRDHFMDADE 187
Query: 206 AKEFGIIDEVIDQR 219
AK++G+ID+++ R
Sbjct: 188 AKDWGVIDKILTSR 201
>emb|CAI27649.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Gardel] gi|58616924|ref|YP_196123.1|
ATP-dependent CLP protease proteolytic subunit
[Ehrlichia ruminantium str. Gardel]
gi|67460150|sp|Q5FFG7|CLPP_EHRRG ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 198
Score = 259 bits (662), Expect = 4e-68
Identities = 125/192 (65%), Positives = 158/192 (82%)
Query: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
+L+PMV+E +SRGERAYDI++RLLKERI+ I GPI D A +VVAQL+FLE+ENP K I+
Sbjct: 2 TLVPMVVEPTSRGERAYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDIS 61
Query: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
MY+NSPGG VTAGL+IYDTMQY++ I T+CLGQAASMGSLLL AG KG R ALPN+ IM
Sbjct: 62 MYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRIM 121
Query: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
IHQPSGG+ GQA DI IH K+I+ + LN +YVKHTG+ L + +M+RD FM+A+ A+
Sbjct: 122 IHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSAQ 181
Query: 208 EFGIIDEVIDQR 219
+FGIID+VI++R
Sbjct: 182 DFGIIDKVIEKR 193
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 394,378,972
Number of Sequences: 2540612
Number of extensions: 16008623
Number of successful extensions: 35626
Number of sequences better than 10.0: 621
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 34779
Number of HSP's gapped (non-prelim): 630
length of query: 238
length of database: 863,360,394
effective HSP length: 124
effective length of query: 114
effective length of database: 548,324,506
effective search space: 62508993684
effective search space used: 62508993684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)
Medicago: description of AC146777.12