BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.8 - phase: 0 /pseudo
(469 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 416 e-115
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 414 e-114
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 414 e-114
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 413 e-114
gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353... 410 e-113
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 398 e-109
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 386 e-106
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 378 e-103
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 375 e-102
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 364 4e-99
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 359 9e-98
gb|AAT85173.1| hypothetical protein [Oryza sativa (japonica cult... 353 6e-96
gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cult... 351 2e-95
ref|NP_175845.1| hypothetical protein [Arabidopsis thaliana] 350 5e-95
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 348 2e-94
ref|NP_189662.1| hypothetical protein [Arabidopsis thaliana] 348 3e-94
gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultiva... 336 8e-91
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 331 3e-89
gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana] gi|... 308 2e-82
dbj|BAB02227.1| unnamed protein product [Arabidopsis thaliana] 304 3e-81
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 416 bits (1070), Expect = e-115
Identities = 230/462 (49%), Positives = 302/462 (64%), Gaps = 17/462 (3%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY++I+E V + GGVFF+ G+GG GKTY+W L+ +RSR +IV NVA+SG+ AL
Sbjct: 830 EQRKIYDQIIEAVYSNSGGVFFVNGFGGTGKTYLWKTLSTYIRSRGEIVLNVASSGMAAL 889
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ ++S C I ++LA LL + KLIIWDEAPM H+ C+EAL +
Sbjct: 890 LLDGGRTAHSRFAIPLQVNETSTCSISPDSDLASLLLRAKLIIWDEAPMLHRHCYEALDR 949
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI---DLISSILQ*CLYIWNHC 190
I+ IL + +E+I L SS L WN C
Sbjct: 950 TLKDIVQADNHKPFGGKTITFGGDFRQILPVITKGSREQIIHASLTSSRL------WNSC 1003
Query: 191 QVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTD 250
+VL LTKNMRL D + +N + FS+ ILK+GDGKL E NDG I+I ++L+ +
Sbjct: 1004 KVLTLTKNMRLTADPTEK-DNIKEFSDWILKLGDGKLSEPNDGEAAIDIPEDMLLLDSLH 1062
Query: 251 PIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSI 310
PI++I Y NLL+N D F R RAIL T V ++NN++++L+PGE KEYFSSD I
Sbjct: 1063 PIDSIANCVYPNLLQNLNDQTFFRERAILCPTNDDVSEVNNHIMDLLPGEVKEYFSSDKI 1122
Query: 311 ---DRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTR 367
D S E DA ++ EFLN +K G+PNH + LK+G P+ML+RNLDQ GLCNGTR
Sbjct: 1123 CDFDTSVE--RDA--NMSTEFLNAIKCSGVPNHVLRLKLGVPVMLIRNLDQKYGLCNGTR 1178
Query: 368 LTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINK 427
L +T+L + VIE K++T N GN+VY+P + ++P+ PF+ RRQF +V F +TINK
Sbjct: 1179 LQVTQLGDRVIEAKVLTGSNAGNKVYLPRLVLTPADFRIPFRFQRRQFPVVPCFGMTINK 1238
Query: 428 SQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
SQGQSL HVG+YLP+ VFSH QLYVA+SRVKS GLKILI D
Sbjct: 1239 SQGQSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIID 1280
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 414 bits (1063), Expect = e-114
Identities = 232/466 (49%), Positives = 306/466 (64%), Gaps = 20/466 (4%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY++I V N+ GGVFF+YG+GG GKT++W LAA++RS+ I NVA+SGI +L
Sbjct: 952 EQRGIYDQITNAVFNDLGGVFFVYGFGGTGKTFIWKTLAAAVRSKGQICLNVASSGIASL 1011
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I+ ++LA+L+K+ LIIWDEAPM KFCFEAL K
Sbjct: 1012 LLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMMSKFCFEALDK 1071
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ I+ + + N K+ ++ ++ I +++ S L Y+W
Sbjct: 1072 SFSDII----KRVDNKVFGGKV----MVFGGDFRQVLPVINGAGRAEIVMSSLN-ASYLW 1122
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
+HC+VL+LTKNMRLLN+ E E FS+ +L VGDG++ E NDG I+I ELLI
Sbjct: 1123 DHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIPEELLI 1182
Query: 246 SNFTDPIEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKE 303
+PIEAI + Y + L D F + RAILA + V+ IN Y+L + EE+
Sbjct: 1183 QEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSEERI 1242
Query: 304 YFSSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLC 363
Y S+DSID S D +TP+FLN +K G+P+HS+ LKVG P+MLLRNLD GLC
Sbjct: 1243 YLSADSIDPSDSDSLKN-PVITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLC 1301
Query: 364 NGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAI 423
NGTRL IT+L +H++E K+IT IG VYIP I+++PS PFK+ RRQF + V+F +
Sbjct: 1302 NGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVM 1361
Query: 424 TINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
TINKSQGQSL+ VGLYLPK VFSH QLYVALSRV S GLKILI D
Sbjct: 1362 TINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILD 1407
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 414 bits (1063), Expect = e-114
Identities = 232/466 (49%), Positives = 306/466 (64%), Gaps = 20/466 (4%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY++I V N+ GGVFF+YG+GG GKT++W LAA++RS+ I NVA+SGI +L
Sbjct: 943 EQRGIYDQITNAVFNDLGGVFFVYGFGGTGKTFIWKTLAAAVRSKGQICLNVASSGIASL 1002
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I+ ++LA+L+K+ LIIWDEAPM KFCFEAL K
Sbjct: 1003 LLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMMSKFCFEALDK 1062
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ I+ + + N K+ ++ ++ I +++ S L Y+W
Sbjct: 1063 SFSDII----KRVDNKVFGGKV----MVFGGDFRQVLPVINGAGRAEIVMSSLN-ASYLW 1113
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
+HC+VL+LTKNMRLLN+ E E FS+ +L VGDG++ E NDG I+I ELLI
Sbjct: 1114 DHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIPEELLI 1173
Query: 246 SNFTDPIEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKE 303
+PIEAI + Y + L D F + RAILA + V+ IN Y+L + EE+
Sbjct: 1174 QEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSEERI 1233
Query: 304 YFSSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLC 363
Y S+DSID S D +TP+FLN +K G+P+HS+ LKVG P+MLLRNLD GLC
Sbjct: 1234 YLSADSIDPSDSDSLKN-PVITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLC 1292
Query: 364 NGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAI 423
NGTRL IT+L +H++E K+IT IG VYIP I+++PS PFK+ RRQF + V+F +
Sbjct: 1293 NGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVM 1352
Query: 424 TINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
TINKSQGQSL+ VGLYLPK VFSH QLYVALSRV S GLKILI D
Sbjct: 1353 TINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILD 1398
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 413 bits (1061), Expect = e-114
Identities = 235/466 (50%), Positives = 307/466 (65%), Gaps = 20/466 (4%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY+ I V N+ GGVFF+YG+GG GKT++W LAA++RSR IV NVA+SGI +L
Sbjct: 1275 EQRGIYDEITGAVFNDLGGVFFIYGFGGTGKTFIWKTLAAAVRSRGQIVLNVASSGIASL 1334
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I ++LA L+K+ LIIWDEAPM KFCFE+L K
Sbjct: 1335 LLEGGRTAHSRFAIPLNPDEFSVCKITPKSDLANLIKEASLIIWDEAPMMSKFCFESLDK 1394
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQE------EIDLISSILQ*CLYIW 187
+ IL N N K+ V+ ++ ++++ S L Y+W
Sbjct: 1395 SFYDIL----NNKDNKVFGGKV----VVFGGDFRQVLPVINGAGRVEIVMSSLN-ASYLW 1445
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
+HC+VLKLTKNMRLL+ S E E +FS+ +L VGDG++ E NDG I+I ELLI
Sbjct: 1446 DHCKVLKLTKNMRLLSGGLSSEEAKEIQQFSDWLLAVGDGRINEPNDGEALIDIPEELLI 1505
Query: 246 SNFTDPIEAIVQSTYSNL--LENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKE 303
+PIEAI + Y + L D F + RAILA T + V+ IN Y+L + EE+
Sbjct: 1506 KEAGNPIEAISKEIYGDPSELHMINDPKFFQRRAILAPTNEDVNTINQYMLEHLKSEERI 1565
Query: 304 YFSSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLC 363
Y S+DSID + D A +TP+FLN ++ G+P+H++ LKVG P+MLLRNLD GLC
Sbjct: 1566 YLSADSIDPTDSDSL-ANPVITPDFLNSIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLC 1624
Query: 364 NGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAI 423
NGTRL IT+LA V++ K+IT IG+ V IP I+++PS PFK+ RRQF + V+FA+
Sbjct: 1625 NGTRLQITQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAM 1684
Query: 424 TINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
TINKSQGQSL+ VGLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1685 TINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1730
>gb|AAD15468.1| putative helicase [Arabidopsis thaliana] gi|25353667|pir||F84517
probable helicase [imported] - Arabidopsis thaliana
Length = 1265
Score = 410 bits (1055), Expect = e-113
Identities = 224/462 (48%), Positives = 303/462 (65%), Gaps = 12/462 (2%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ +YN I E V N GGVFF+YG+GG GKT++W L+A++R R IV NVA+SGI +L
Sbjct: 805 EQRGVYNEITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSATIRYRDQIVLNVASSGIASL 864
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I+ ++LA L+K+ L+IWDEAPM +FCFEAL K
Sbjct: 865 LLEGGRTAHSRFGIPLNPDEFSVCKIKPKSDLANLVKKASLVIWDEAPMMSRFCFEALDK 924
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQE--EIDLISSILQ*CLYIWNHCQ 191
+ I+ +N N K+ + + +++ S L Y+W++C+
Sbjct: 925 SFSDII----KNTDNTVFGGKVVVFGGDFRQVFPVINGAGRAEIVMSSLN-ASYLWDNCK 979
Query: 192 VLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFT 249
VLKLTKN RLL + +E E FS+ +L VGDG++ E NDG I+I +LLI+N
Sbjct: 980 VLKLTKNTRLLANNLSETEAKEIQEFSDWLLAVGDGRINESNDGVAIIDIPEDLLITNAD 1039
Query: 250 DPIEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSS 307
PIE+I Y + +L D F + RAILAS + V+ IN Y+L+ + EE+ Y S+
Sbjct: 1040 KPIESITNEIYGDPKILHEITDPKFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSA 1099
Query: 308 DSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTR 367
DSID + D +TP+FLN +K GLPNHS+ LKVG P++LLRNLD GLCNGTR
Sbjct: 1100 DSIDPTDSDSLSN-PVITPDFLNSIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTR 1158
Query: 368 LTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINK 427
L IT+L ++E K+IT IG+ + IP ++++P+ PFK+ RRQF + V+F +TINK
Sbjct: 1159 LQITQLCTQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINK 1218
Query: 428 SQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
S+GQSL+HVGLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1219 SEGQSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1260
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 398 bits (1023), Expect = e-109
Identities = 219/458 (47%), Positives = 302/458 (65%), Gaps = 17/458 (3%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK IY+ IM+ V +++GGVFF+YG+GG GKT++W +L+A++RS+ DI NVA+SGI AL
Sbjct: 547 EQKKIYDEIMDAVLHDRGGVFFVYGFGGTGKTFLWKLLSAAIRSKGDISLNVASSGIAAL 606
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ +SS C+I +G++L EL+K+ LIIWDE PM K CFE+L +
Sbjct: 607 LLDGGRTTHSRFGIPINPNESSTCNISRGSDLGELVKEANLIIWDETPMMSKHCFESLDR 666
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWNH 189
I+ N + K +L +EEI + + L YIW H
Sbjct: 667 TLRDIM----NNPGDKPFGGKGIVFGGDFRQVLPVINGAGREEI--VFAALN-SSYIWEH 719
Query: 190 CQVLKLTKNMRLL-NDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNF 248
C+VL+LTKNMRLL N + E FS+ IL VGDGK+ + NDG I+I E LI+
Sbjct: 720 CKVLELTKNMRLLANISEHEKRDIEYFSKWILDVGDGKISQPNDGIALIDIPEEFLINGD 779
Query: 249 TDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSD 308
DP+E+I+++ Y N +D F + RAIL T + V+ IN ++++++ GEE+ Y SSD
Sbjct: 780 NDPVESIIEAVYGNTFMEEKDPKFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSD 839
Query: 309 SIDRSKEDG--NDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGT 366
SID + NDA+ + +FLN ++ GLPNH + LKVG P+MLLRN+D +GLCNGT
Sbjct: 840 SIDPADTSSANNDAY---SADFLNSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGT 896
Query: 367 RLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITIN 426
RL +T++A+ VI+ + IT +G V IP + ++PS PFK+ RRQF + V+FA+TIN
Sbjct: 897 RLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTIN 956
Query: 427 KSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLK 464
KSQGQ+L+ VGLYLP+ VFSH QLYVA+SRV S G K
Sbjct: 957 KSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 994
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 386 bits (991), Expect = e-106
Identities = 218/468 (46%), Positives = 296/468 (62%), Gaps = 18/468 (3%)
Query: 11 MLDEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGI 70
M EQK IY+ I++ V GG+FF+YG+GG KT+MW L+A++R R I NVA+SGI
Sbjct: 618 MTSEQKGIYDEIIKAVLENSGGIFFVYGFGGTSKTFMWKTLSAAVRMRGLISVNVASSGI 677
Query: 71 VALLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEA 130
+LLL GGRT HSRF IP+ + C I ++LA +LK+ LIIWDEAPM ++CFE+
Sbjct: 678 ASLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANMLKEASLIIWDEAPMMSRYCFES 737
Query: 131 LYKNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYI 186
L ++ ++ N+ K+ +L + + EI L + Y+
Sbjct: 738 LDRSLNDVI----GNIDGKPFGGKVVVFGGDFRQVLPVIHGAGRAEIVLAALNSS---YL 790
Query: 187 WNHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELL 244
W HC+VL LTKNMRL+++ E E FS +L VGDG++ E NDG I+I ELL
Sbjct: 791 WEHCKVLTLTKNMRLMSNDLDKDEAEEIKEFSNWLLAVGDGRVSEPNDGEVLIDIPEELL 850
Query: 245 ISNFTDPIEAIVQSTYSNL--LENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
I + DPIEAI ++ Y +L L+ D F + RAIL V+ IN+ +L+ + GE
Sbjct: 851 IKDANDPIEAITKAVYGDLDLLQPNNDPKFFQQRAILCPRNTDVNTINDIMLDKLNGELV 910
Query: 303 EYFSSDSIDRSKEDGNDAFEQV-TPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
Y S+DSID +D V TP+FLN +K GLPNH++ LK+GTP+MLLRN+D G
Sbjct: 911 TYLSADSID--PQDAASLNNPVLTPDFLNSIKLSGLPNHNLTLKIGTPVMLLRNIDPKGG 968
Query: 362 LCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSF 421
LCNGTRL +T++ NH++E ++IT +G++V I +SPS PF++ RRQF I V+F
Sbjct: 969 LCNGTRLQVTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVAF 1028
Query: 422 AITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
A+TINKSQGQSL VG+YLPK VFSH QLYVALSRV S +GLK+LI D
Sbjct: 1029 AMTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVD 1076
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 378 bits (970), Expect = e-103
Identities = 207/464 (44%), Positives = 293/464 (62%), Gaps = 14/464 (3%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK ++ I+E G + F+ GYGG GKTY+W + LRS IV VA+ GI AL
Sbjct: 1159 EQKVAFDSIIESTNKGLGKLMFVDGYGGTGKTYLWRAITTKLRSEGKIVLTVASCGIAAL 1218
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S CDI++G+ LAELLK+T LI+WDEAPMA++ CFEAL +
Sbjct: 1219 LLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMANRICFEALDR 1278
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ IL E+ + V+L ++ + ++++ ++ Y+W
Sbjct: 1279 SLRDILRSKGEDNSTKPFGG----MTVVLGGDFRQILPVVRKGRRTQIVNASIKRS-YLW 1333
Query: 188 NHCQVLKLTKNMRL--LNDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
H + KLT+NMRL ++ + T F++ IL +GDGK DG IEI ++L++
Sbjct: 1334 QHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSA-DGEEWIEIPDDLIL 1392
Query: 246 SNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYF 305
DP E IV+S Y NL++N++ DFL RAIL + +IN +++N+I GEE Y
Sbjct: 1393 KKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETAREINEFIMNMIEGEEITYL 1452
Query: 306 SSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNG 365
S D++ ++ + ++ EFLN L G+PNH + LKVG P+MLLRN++Q+ GLCNG
Sbjct: 1453 SCDTVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKVGLPVMLLRNINQSSGLCNG 1512
Query: 366 TRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITI 425
TR+TIT+L IE +IIT ++G +VYIP I M+P++ WPF L RRQ+ + V FA+TI
Sbjct: 1513 TRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTI 1572
Query: 426 NKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
NKSQGQSL+ VGLYLPK VF+H QLYVA SRV +GL+I++ D
Sbjct: 1573 NKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDD 1616
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 375 bits (964), Expect = e-102
Identities = 206/464 (44%), Positives = 292/464 (62%), Gaps = 14/464 (3%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK ++ I+E G + F+ GYGG GKTY+W + LRS IV VA+ GI AL
Sbjct: 1050 EQKVAFDSIIESTNKGLGKLMFVDGYGGTGKTYLWRAITTKLRSEGKIVLTVASCGIAAL 1109
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S CDI++G+ LAELLK+T LI+WDEAPMA++ CFEAL +
Sbjct: 1110 LLHGGRTAHSRFHIPLIVTEESTCDIKQGSHLAELLKKTSLILWDEAPMANRICFEALDR 1169
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ IL E+ + V+L ++ + ++++ ++ Y+W
Sbjct: 1170 SLRDILRSKGEDNSTKPFGG----MTVVLGGDFRQILPVVRKGRRTQIVNASIKRS-YLW 1224
Query: 188 NHCQVLKLTKNMRL--LNDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
H + KLT+NMRL ++ + T F++ IL +GDGK DG IEI ++L++
Sbjct: 1225 QHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWILNIGDGKTTSA-DGEEWIEIPDDLIL 1283
Query: 246 SNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYF 305
DP E IV+S Y NL++N++ DFL RAIL + IN +++N+I GEE Y
Sbjct: 1284 KKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETARKINEFIMNMIEGEEITYL 1343
Query: 306 SSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNG 365
S D++ ++ + ++ EFLN L G+PNH + LK+G P+MLLRN++Q+ GLCNG
Sbjct: 1344 SCDTVCKATTNDSETDVLYPTEFLNSLNFPGMPNHVLKLKLGLPVMLLRNINQSSGLCNG 1403
Query: 366 TRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITI 425
TR+TIT+L IE +IIT ++G +VYIP I M+P++ WPF L RRQ+ + V FA+TI
Sbjct: 1404 TRMTITQLGKRFIEAQIITGTHVGEKVYIPRIIMTPTESGWPFLLKRRQYPLSVCFAMTI 1463
Query: 426 NKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
NKSQGQSL+ VGLYLPK VF+H QLYVA SRV +GL+I++ D
Sbjct: 1464 NKSQGQSLNMVGLYLPKQVFTHGQLYVAFSRVTRRDGLRIMLDD 1507
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 364 bits (934), Expect = 4e-99
Identities = 208/460 (45%), Positives = 280/460 (60%), Gaps = 41/460 (8%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ +YN I E V N GGVFF+YG+GG GKT++W L+A++R R IV NVA+SGI +L
Sbjct: 1234 EQRGVYNAITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSAAIRCRGQIVLNVASSGIASL 1293
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+ ++K ++++K T ++ + F
Sbjct: 1294 LLEGGRTAHSRFGIPLNHDEFSV-SLDKS--FSDIIKNTNNKVFGGKVVVFGGDFR---- 1346
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQVL 193
Q L + E+++ Y+W+HC+VL
Sbjct: 1347 -------------QVLPVINGAGRAEIVMSSLN----------------ASYLWDHCKVL 1377
Query: 194 KLTKNMRLL--NDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDP 251
KLTKNMRLL N A ++ + FS+ +L V DG++ E NDG I+I +LLI+N P
Sbjct: 1378 KLTKNMRLLANNLSATEAKEIQEFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKP 1437
Query: 252 IEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDS 309
IE I Y + +L D F + RAILA + V+ IN Y+L + EE+ Y S+DS
Sbjct: 1438 IETITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADS 1497
Query: 310 IDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLT 369
ID + D + +TP+FLN +K GLPNHS+ LKVG P+MLLRNLD GLCNGTRL
Sbjct: 1498 IDPTDSDSLNN-PVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQ 1556
Query: 370 ITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQ 429
IT+L ++E K+IT IGN V IP ++++P+ PFK+ RRQF + V+FA+TINKSQ
Sbjct: 1557 ITQLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQ 1616
Query: 430 GQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
GQSL+H+GLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1617 GQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1656
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 359 bits (922), Expect = 9e-98
Identities = 214/467 (45%), Positives = 289/467 (61%), Gaps = 52/467 (11%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK +Y++IM+ V N KGG DI NVA+SGI +L
Sbjct: 1027 EQKKVYDKIMDAVLNNKGG---------------------------DICLNVASSGIASL 1059
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ ++S C++E+G++LAEL+ KLIIWDEAPM K+CFE+L K
Sbjct: 1060 LLEGGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEAPMMSKYCFESLDK 1119
Query: 134 NH*RIL*V*EENLQNLSLAEKL*Y--------LEVILDKYYQ*CQEEIDLISSILQ*CLY 185
+ IL +++ KL L VIL E+ + SS+ +
Sbjct: 1120 SLKDIL----STPEDMPFGGKLIIFGGDFRQILPVILA-----AGRELIVKSSLNS--SH 1168
Query: 186 IWNHCQVLKLTKNMRLLND-QAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELL 244
+W +C+V KLTKNMRLL D + E FS+ IL VG+GKL + NDG I+I +++L
Sbjct: 1169 LWQYCKVFKLTKNMRLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQIQIRDDIL 1228
Query: 245 ISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEY 304
I +PIE+I+++ Y + +D F ++RAIL T V+ IN+++L+ + GEEK Y
Sbjct: 1229 IPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIY 1288
Query: 305 FSSDSIDRS--KEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGL 362
SSDSID S + D N + TP+FLN +K GLPNH + LKVG P+MLLRNLD GL
Sbjct: 1289 RSSDSIDPSDTRADKNPVY---TPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGL 1345
Query: 363 CNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFA 422
NGTRL I RL + +++ +I+T +G V IP + ++PS PFK+ RRQF + V+FA
Sbjct: 1346 MNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFA 1405
Query: 423 ITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
+TINKSQGQSL +VG+YLPK VFSH QLYVA+SRVKS GLK+LI D
Sbjct: 1406 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITD 1452
>gb|AAT85173.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 807
Score = 353 bits (906), Expect = 6e-96
Identities = 212/469 (45%), Positives = 289/469 (61%), Gaps = 17/469 (3%)
Query: 13 DEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
+ QK ++N I N +G FF+YGYGG KT++W L S+RS+ I VA+SGI +
Sbjct: 318 NSQKEVFNAIYNSAINNEGRTFFVYGYGGTRKTFLWTTLLNSIRSQGKIALVVASSGIAS 377
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALY 132
LLLPGGRT HSRFKIP+ Q+S+C I+K T LAEL+++T LI+WDEAP+ HK+CFE+L
Sbjct: 378 LLLPGGRTPHSRFKIPLEISQNSMCSIKKNTNLAELIQKTSLIVWDEAPVNHKYCFESLD 437
Query: 133 KNH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISS--ILQ*CL---YIW 187
+ IL E N SL ++ + V+L ++ I + IL+ C+ Y+W
Sbjct: 438 RTLRDIL---SETNPN-SLDKQFGGITVVLGGDFRQTLPVIQNATKQQILRSCIVNSYLW 493
Query: 188 NHCQVLKLTKNMRLLNDQ--AQSSENTERFSE*ILKVGDGKLG----EENDGYNDIEISN 241
N C +++LT+NMRL + AQ E FS +LK+G+G E IE+
Sbjct: 494 NKCILIELTENMRLTSASISAQDREELRNFSNWLLKIGNGTEPFVDVPEQLTNMFIEMPQ 553
Query: 242 ELLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEE 301
LL+S ++ ++ Y+ + +L RAILA T +VV +INN ++ + E
Sbjct: 554 SLLLSPDCRNLDGLISFVYNLGCQPSNLTSYLCERAILAPTNEVVSEINNRMIAQLEASE 613
Query: 302 KEYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAE 360
Y+SSDSID S + A E + P EFLN + GLP H + LK+G PIMLLRNLD +
Sbjct: 614 MSYYSSDSIDDSSTNCT-AIEALYPTEFLNTISINGLPEHVLHLKIGVPIMLLRNLDPSI 672
Query: 361 GLCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVS 420
GLCNGTRL +T+L + VIE +I T K G + YIP I + ++ WPFKL RRQF I +S
Sbjct: 673 GLCNGTRLIVTQLTSRVIEGEINTGKAKGTKAYIPRIVTTLTQSKWPFKLRRRQFPIHLS 732
Query: 421 FAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
+A+TINKSQGQ+L VG+YLP VFSH QLYVA SRV S GLK+LI +
Sbjct: 733 YAMTINKSQGQTLSRVGVYLPSPVFSHGQLYVAFSRVTSPNGLKVLIEN 781
>gb|AAP54104.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1477
Score = 351 bits (901), Expect = 2e-95
Identities = 198/449 (44%), Positives = 284/449 (63%), Gaps = 18/449 (4%)
Query: 31 GGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVALLLPGGRTVHSRFKIPVP 90
G + F+ GYGG GKTY+W + LRS IV VA+SG+ ALLL GGRT HS F IP+
Sbjct: 1018 GKLIFVDGYGGTGKTYLWKAITTRLRSEGKIVLAVASSGVAALLLQGGRTAHSAFNIPIN 1077
Query: 91 TLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYKNH*RIL*V*EENLQNLS 150
C I++G+ +A+LL +T LI+WDEAPMA++ CFEAL K+ + EN S
Sbjct: 1078 LTDEYTCFIKQGSHIADLLMKTSLILWDEAPMANRNCFEALDKSLRDVQRCRNEN----S 1133
Query: 151 LAEKL*YLEVILDKYYQ*CQEEID------LISSILQ*CLYIWNHCQVLKLTKNMRL--- 201
+ + V+L ++ + +++ ++ C Y+W H +V LTKNMRL
Sbjct: 1134 CQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNATIK-CSYLWQHFEVFNLTKNMRLNYV 1192
Query: 202 LNDQAQSSENTERFSE*ILKVGDGK-LGEENDGYNDIEISNELLISNFTDPIEAIVQSTY 260
DQ + ++ E F+E IL++G+G + + G+ + + ++LL+ DP I++STY
Sbjct: 1193 SKDQTEHQKSAE-FAEWILQIGNGDTISLDEKGW--VRMPSDLLLQKGDDPKAQIIESTY 1249
Query: 261 SNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDA 320
+L +N ++L RAIL + V+++N Y+++ I G++ Y S DS+ +S ++
Sbjct: 1250 PDLQDNCCKQNYLEERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEM 1309
Query: 321 FEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEV 380
EFLN L G+PNH + LKVG P+MLLRN++Q+ GLCNGTR+TITRL N VIE
Sbjct: 1310 EMLYPTEFLNSLNHSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEA 1369
Query: 381 KIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYL 440
+IIT + G+ V IP I MSP++ WPF L R+QF + V FA+TINKSQGQ+L+ VGLYL
Sbjct: 1370 QIITGTHSGDMVCIPQIIMSPTEPKWPFMLNRKQFPLSVCFAMTINKSQGQTLNKVGLYL 1429
Query: 441 PKDVFSHEQLYVALSRVKSNEGLKILIHD 469
P+ VF+H QLYVA+SRV S +GLKILI D
Sbjct: 1430 PRQVFTHGQLYVAVSRVTSRDGLKILIAD 1458
>ref|NP_175845.1| hypothetical protein [Arabidopsis thaliana]
Length = 1639
Score = 350 bits (898), Expect = 5e-95
Identities = 205/466 (43%), Positives = 291/466 (61%), Gaps = 22/466 (4%)
Query: 13 DEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
++Q+ IY+ +++ V N++G +FFLYG GG GKT+++ + ++LRS V VA+S I A
Sbjct: 1153 EQQRIIYDDVLKSVINKEGKLFFLYGAGGTGKTFLYKTIISALRSNGKNVMPVASSAIAA 1212
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALY 132
LLLPGGRT HSRFKIP+ + SICDI+ G+ LA +L + LIIWDEAPMAH+ FEA+
Sbjct: 1213 LLLPGGRTAHSRFKIPINVHEDSICDIKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVD 1272
Query: 133 KNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWN 188
+ IL V +E + K L IL Q ++E +S+ + Y+W
Sbjct: 1273 RTLRDILSVGDEKALTKTFGGKTVLLGGDFRQILPVIPQGTRQE--TVSAAIN-RSYLWE 1329
Query: 189 HCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND------IEISNE 242
C L++NMR+ ++ +F+E IL+VGDG+ + G +D I I
Sbjct: 1330 SCHKYLLSQNMRVQPEEI-------KFAEWILQVGDGEAPRKTHGIDDDQEEDNIIIDKN 1382
Query: 243 LLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
LL+ +P+E + +S + + FQD + L+ A+L + VD+IN+Y+L+ +PG K
Sbjct: 1383 LLLPETENPLEVLCRSVFPDFTNTFQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAK 1442
Query: 303 EYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
EYFS+DSIDR + + FE P E+LN L+ GLP H + LKVG PIMLLRNL+Q EG
Sbjct: 1443 EYFSADSIDRDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEG 1502
Query: 362 LCNGTRLTITRLANHVIEVKIITE-KNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVS 420
LCNGTRL +T L + V++ +I+++ +V IP I +SP PF L RRQF + +
Sbjct: 1503 LCNGTRLIVTHLGDKVLKAEILSDTTKERKKVLIPRIILSPQDSKHPFTLRRRQFPVRMC 1562
Query: 421 FAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
+A+TINKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 1563 YAMTINKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 1608
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 348 bits (893), Expect = 2e-94
Identities = 200/443 (45%), Positives = 270/443 (60%), Gaps = 41/443 (9%)
Query: 31 GGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVALLLPGGRTVHSRFKIPVP 90
GGVFF+YG+GG GKT++W L+A++R R IV NVA+SGI +LLL GGRT HSRF IP+
Sbjct: 302 GGVFFVYGFGGTGKTFIWKTLSAAIRCRGQIVLNVASSGIASLLLEGGRTAHSRFGIPLN 361
Query: 91 TLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYKNH*RIL*V*EENLQNLS 150
+ S+ ++K ++++K T ++ + F Q L
Sbjct: 362 HDEFSV-SLDKS--FSDIIKNTNNKVFGGKVVVFGGDFR-----------------QVLP 401
Query: 151 LAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQVLKLTKNMRLL--NDQAQS 208
+ E+++ Y+W+HC+VLKLTKNMRLL N A
Sbjct: 402 VINGAGRAEIVMSSLN----------------ASYLWDHCKVLKLTKNMRLLANNLSATE 445
Query: 209 SENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIEAIVQSTYSN--LLEN 266
++ + FS+ +L V DG++ E NDG I+I +LLI+N PIE I Y + +L
Sbjct: 446 AKEIQEFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKPIETITNEIYGDPKILHE 505
Query: 267 FQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTP 326
D F + RAILA + V+ IN Y+L + EE+ Y S+DSID + D + +TP
Sbjct: 506 ITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADSIDPTDSDSLNN-PVITP 564
Query: 327 EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEK 386
+FLN +K GLPNHS+ LKVG P+MLLRNLD GLCNGTRL IT+L ++E K+IT
Sbjct: 565 DFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQITQLCTQIVEAKVITGD 624
Query: 387 NIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFS 446
IGN V IP ++++P+ PFK+ RRQF + V+FA+TINKSQGQSL+H+GLYLPK VFS
Sbjct: 625 RIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHIGLYLPKPVFS 684
Query: 447 HEQLYVALSRVKSNEGLKILIHD 469
H QLYVALSRV S +GLKILI D
Sbjct: 685 HGQLYVALSRVTSKKGLKILILD 707
>ref|NP_189662.1| hypothetical protein [Arabidopsis thaliana]
Length = 837
Score = 348 bits (892), Expect = 3e-94
Identities = 204/466 (43%), Positives = 291/466 (61%), Gaps = 22/466 (4%)
Query: 13 DEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
++Q+ IY+ +++ VTN++G +FFLYG GG GKT+++ + ++LRS V VA+S I A
Sbjct: 351 EQQRIIYDDVLKSVTNKEGKLFFLYGDGGTGKTFLYKTIISALRSNGKNVMPVASSAIAA 410
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALY 132
LLLPGGRT HS FKIP+ + ICDI+ G+ LA +L + LIIWDEAPMAH+ FEA+
Sbjct: 411 LLLPGGRTAHSWFKIPINVHEDFICDIKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVD 470
Query: 133 KNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWN 188
+ IL V +E +L K L IL Q ++E +S+ + Y+W
Sbjct: 471 RTLRDILSVGDEKALTKTLGGKTVLLGGDFRQILPVIPQRTRQE--TVSAAIN-RSYLWE 527
Query: 189 HCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND------IEISNE 242
C L++NMR+ ++ +F+E IL++GDG+ + G +D I I
Sbjct: 528 SCHKYLLSQNMRVQPEEI-------KFAEWILQIGDGEAPRKTHGIDDDQEEDNIIIDKN 580
Query: 243 LLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
LL+ +P+E + QS + FQD + L+ A+L + VD+IN+Y+L+ +PG K
Sbjct: 581 LLLPETENPLEVLCQSVSPDFTNTFQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAK 640
Query: 303 EYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
EYFS+DSID+ + + FE P E+LN L+ GLP H + LKVG PIMLLRNL+Q EG
Sbjct: 641 EYFSADSIDQDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEG 700
Query: 362 LCNGTRLTITRLANHVIEVKIITE-KNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVS 420
LCNGTRLT+T L + V++ +I+++ +V IP I +SP PF L RRQF + +
Sbjct: 701 LCNGTRLTVTHLGDKVLKAEILSDTTKKRKKVLIPRIILSPQDSKHPFTLRRRQFPVRMC 760
Query: 421 FAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
+A+T+NKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 761 YAMTVNKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 806
>gb|AAK54292.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1501
Score = 336 bits (862), Expect = 8e-91
Identities = 191/436 (43%), Positives = 275/436 (62%), Gaps = 18/436 (4%)
Query: 44 KTYMWNILAASLRSRKDIVFNVATSGIVALLLPGGRTVHSRFKIPVPTLQSSICDIEKGT 103
KTY+W + LRS IV VA+SG+ ALLL GGRT HS F IP+ C I++G+
Sbjct: 1055 KTYLWKAITTRLRSEGKIVLAVASSGVAALLLQGGRTAHSAFNIPINLTDEYTCFIKQGS 1114
Query: 104 ELAELLKQTKLIIWDEAPMAHKFCFEALYKNH*RIL*V*EENLQNLSLAEKL*YLEVILD 163
+A+LL +T LI+WDEAPMA++ CFEAL K+ + EN S + + V+L
Sbjct: 1115 HIADLLMKTSLILWDEAPMANRNCFEALDKSLRDVQRCRNEN----SCQKPFGGMTVVLG 1170
Query: 164 KYYQ*CQEEID------LISSILQ*CLYIWNHCQVLKLTKNMRL---LNDQAQSSENTER 214
++ + +++ ++ C Y+W H +V LTKNMRL DQ + ++ E
Sbjct: 1171 GDFRQILPIVPKGRREHTVNATIK-CSYLWQHFEVFNLTKNMRLNYVSKDQTEHQKSAE- 1228
Query: 215 FSE*ILKVGDGK-LGEENDGYNDIEISNELLISNFTDPIEAIVQSTYSNLLENFQDGDFL 273
F+E IL++G+G + + G+ + + ++LL+ DP I++STY +L +N ++L
Sbjct: 1229 FAEWILQIGNGDTISLDEKGW--VRMPSDLLLQKGDDPKAQIIESTYPDLQDNCCKQNYL 1286
Query: 274 RNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTPEFLNCLK 333
RAIL + V+++N Y+++ I G++ Y S DS+ +S ++ EFLN L
Sbjct: 1287 EERAILCPVNENVNELNEYIMDQIQGDKVTYLSRDSVSKSVSYSHEMEMLYPTEFLNSLN 1346
Query: 334 TYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQVY 393
G+PNH + LKVG P+MLLRN++Q+ GLCNGTR+TITRL N VIE +IIT + G+ V
Sbjct: 1347 HSGIPNHQLKLKVGLPVMLLRNINQSAGLCNGTRMTITRLGNKVIEAQIITGTHSGDMVC 1406
Query: 394 IPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVA 453
IP I MSP++ WPF L R+QF + V FA+TINKSQGQ+L+ VGLYLP+ VF+H QLYVA
Sbjct: 1407 IPQIIMSPTEPKWPFMLNRKQFPLSVCFAMTINKSQGQTLNKVGLYLPRQVFTHGQLYVA 1466
Query: 454 LSRVKSNEGLKILIHD 469
+SRV S +GLKILI D
Sbjct: 1467 VSRVTSRDGLKILIAD 1482
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 331 bits (848), Expect = 3e-89
Identities = 202/467 (43%), Positives = 275/467 (58%), Gaps = 70/467 (14%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK +Y++IM+ V N KGG
Sbjct: 1241 EQKKVYDKIMDAVLNNKGG----------------------------------------- 1259
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
GRT HSRF IP+ ++S C++E+G++LAEL+ KLIIWDEAPM K+CFE+L K
Sbjct: 1260 ----GRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEAPMMSKYCFESLDK 1315
Query: 134 NH*RIL*V*EENLQNLSLAEKL*Y--------LEVILDKYYQ*CQEEIDLISSILQ*CLY 185
+ IL +++ KL L VIL E+ + SS+ +
Sbjct: 1316 SLKDIL----STPEDMPFGGKLIIFGGDFRQILPVILA-----AGRELIVKSSLNS--SH 1364
Query: 186 IWNHCQVLKLTKNMRLLND-QAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELL 244
+W +C+V KLTKNMRLL D + E FS+ IL VG+GKL + NDG I+I +++L
Sbjct: 1365 LWQYCKVFKLTKNMRLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQIQIRDDIL 1424
Query: 245 ISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEY 304
I +PIE+I+++ Y + +D F ++RAIL T V+ IN+++L+ + GEEK Y
Sbjct: 1425 IPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIY 1484
Query: 305 FSSDSIDRS--KEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGL 362
SSDSID S + D N + TP+FLN +K GLPNH + LKVG P+MLLRNLD GL
Sbjct: 1485 RSSDSIDPSDTRADKNPVY---TPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGL 1541
Query: 363 CNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFA 422
NGTRL I RL + +++ +I+T +G V IP + ++PS PFK+ RRQF + V+FA
Sbjct: 1542 MNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFA 1601
Query: 423 ITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
+TINKSQGQSL +VG+YLPK VFSH QLYVA+SRVKS GLK+LI D
Sbjct: 1602 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITD 1648
>gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana] gi|25353659|pir||A96586
hypothetical protein F20D21.24 [imported] - Arabidopsis
thaliana
Length = 1250
Score = 308 bits (790), Expect = 2e-82
Identities = 186/417 (44%), Positives = 256/417 (60%), Gaps = 22/417 (5%)
Query: 62 VFNVATSGIVALLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAP 121
V VA+S I ALLLPGGRT HSRFKIP+ + SICDI+ G+ LA +L + LIIWDEAP
Sbjct: 813 VMPVASSAIAALLLPGGRTAHSRFKIPINVHEDSICDIKIGSMLANVLSKVDLIIWDEAP 872
Query: 122 MAHKFCFEALYKNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLIS 177
MAH+ FEA+ + IL V +E + K L IL Q ++E +S
Sbjct: 873 MAHRHTFEAVDRTLRDILSVGDEKALTKTFGGKTVLLGGDFRQILPVIPQGTRQE--TVS 930
Query: 178 SILQ*CLYIWNHCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND- 236
+ + Y+W C L++NMR+ ++ +F+E IL+VGDG+ + G +D
Sbjct: 931 AAIN-RSYLWESCHKYLLSQNMRVQPEEI-------KFAEWILQVGDGEAPRKTHGIDDD 982
Query: 237 -----IEISNELLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINN 291
I I LL+ +P+E + +S + + FQD + L+ A+L + VD+IN+
Sbjct: 983 QEEDNIIIDKNLLLPETENPLEVLCRSVFPDFTNTFQDLENLKGTAVLTPRNETVDEIND 1042
Query: 292 YVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPI 350
Y+L+ +PG KEYFS+DSIDR + + FE P E+LN L+ GLP H + LKVG PI
Sbjct: 1043 YLLSKVPGLAKEYFSADSIDRDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPI 1102
Query: 351 MLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITE-KNIGNQVYIPGISMSPSKLPWPFK 409
MLLRNL+Q EGLCNGTRL +T L + V++ +I+++ +V IP I +SP PF
Sbjct: 1103 MLLRNLNQKEGLCNGTRLIVTHLGDKVLKAEILSDTTKERKKVLIPRIILSPQDSKHPFT 1162
Query: 410 LVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
L RRQF + + +A+TINKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 1163 LRRRQFPVRMCYAMTINKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 1219
>dbj|BAB02227.1| unnamed protein product [Arabidopsis thaliana]
Length = 619
Score = 304 bits (779), Expect = 3e-81
Identities = 184/417 (44%), Positives = 255/417 (61%), Gaps = 22/417 (5%)
Query: 62 VFNVATSGIVALLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAP 121
V VA+S I ALLLPGGRT HS FKIP+ + ICDI+ G+ LA +L + LIIWDEAP
Sbjct: 182 VMPVASSAIAALLLPGGRTAHSWFKIPINVHEDFICDIKIGSMLANVLSKVDLIIWDEAP 241
Query: 122 MAHKFCFEALYKNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLIS 177
MAH+ FEA+ + IL V +E +L K L IL Q ++E +S
Sbjct: 242 MAHRHTFEAVDRTLRDILSVGDEKALTKTLGGKTVLLGGDFRQILPVIPQRTRQET--VS 299
Query: 178 SILQ*CLYIWNHCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND- 236
+ + Y+W C L++NMR+ ++ +F+E IL++GDG+ + G +D
Sbjct: 300 AAINRS-YLWESCHKYLLSQNMRVQPEEI-------KFAEWILQIGDGEAPRKTHGIDDD 351
Query: 237 -----IEISNELLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINN 291
I I LL+ +P+E + QS + FQD + L+ A+L + VD+IN+
Sbjct: 352 QEEDNIIIDKNLLLPETENPLEVLCQSVSPDFTNTFQDLENLKGTAVLTPRNETVDEIND 411
Query: 292 YVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPI 350
Y+L+ +PG KEYFS+DSID+ + + FE P E+LN L+ GLP H + LKVG PI
Sbjct: 412 YLLSKVPGLAKEYFSADSIDQDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPI 471
Query: 351 MLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQ-VYIPGISMSPSKLPWPFK 409
MLLRNL+Q EGLCNGTRLT+T L + V++ +I+++ + V IP I +SP PF
Sbjct: 472 MLLRNLNQKEGLCNGTRLTVTHLGDKVLKAEILSDTTKKRKKVLIPRIILSPQDSKHPFT 531
Query: 410 LVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
L RRQF + + +A+T+NKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 532 LRRRQFPVRMCYAMTVNKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 588
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.328 0.144 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 719,432,748
Number of Sequences: 2540612
Number of extensions: 29469016
Number of successful extensions: 94348
Number of sequences better than 10.0: 335
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 93633
Number of HSP's gapped (non-prelim): 533
length of query: 469
length of database: 863,360,394
effective HSP length: 132
effective length of query: 337
effective length of database: 527,999,610
effective search space: 177935868570
effective search space used: 177935868570
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 77 (34.3 bits)
Medicago: description of AC146756.8