BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146755.12 + phase: 0
(57 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS38575.1| short-chain dehydrogenase Tic32 [Pisum sativum] 70 1e-11
emb|CAB81242.1| putative protein [Arabidopsis thaliana] gi|73210... 63 2e-09
emb|CAB79298.1| putative protein [Arabidopsis thaliana] gi|34510... 61 9e-09
emb|CAB79297.1| putative protein [Arabidopsis thaliana] gi|34510... 61 9e-09
gb|AAN13078.1| unknown protein [Arabidopsis thaliana] gi|4256706... 61 9e-09
gb|AAM65772.1| putativepod-specific dehydrogenase SAC25 [Arabido... 61 9e-09
ref|NP_849428.1| short-chain dehydrogenase/reductase (SDR) famil... 61 9e-09
gb|AAN64176.1| unknown protein [Arabidopsis thaliana] 61 9e-09
gb|AAP54898.1| hypothetical protein [Oryza sativa (japonica cult... 53 2e-06
gb|AAP54899.1| putative WW-domain oxidoreductase [Oryza sativa (... 52 3e-06
gb|AAP54900.1| putative WW-domain oxidoreductase [Oryza sativa (... 51 7e-06
dbj|BAD46231.1| putative oxidoreductase [Oryza sativa (japonica ... 49 3e-05
ref|NP_909282.1| putative pod-specific dehydrogenase SAC25 [Oryz... 46 3e-04
ref|XP_471616.1| OSJNBa0029L02.2 [Oryza sativa (japonica cultiva... 45 4e-04
emb|CAB85991.1| putative protein [Arabidopsis thaliana] gi|11250... 44 0.001
gb|AAM20410.1| putative oxidoreductase [Arabidopsis thaliana] gi... 44 0.001
ref|NP_568102.1| short-chain dehydrogenase/reductase (SDR) famil... 44 0.001
gb|AAM63701.1| putativepod-specific dehydrogenase SAC25 [Arabido... 43 0.003
gb|AAX96188.1| short-chain dehydrogenase Tic32 [Oryza sativa (ja... 42 0.003
emb|CAB58175.1| putative pod-specific dehydrogenase SAC25 [Brass... 42 0.004
>gb|AAS38575.1| short-chain dehydrogenase Tic32 [Pisum sativum]
Length = 316
Score = 70.1 bits (170), Expect = 1e-11
Identities = 35/40 (87%), Positives = 38/40 (94%), Gaps = 1/40 (2%)
Query: 1 MWPFS-KKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MWPFS KKGVSGFSG+STAE+VTHGIDA+GLTAIVTG SS
Sbjct: 1 MWPFSSKKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASS 40
>emb|CAB81242.1| putative protein [Arabidopsis thaliana]
gi|7321038|emb|CAB82146.1| putative protein
[Arabidopsis thaliana] gi|15233359|ref|NP_192880.1|
short-chain dehydrogenase/reductase (SDR) family
protein [Arabidopsis thaliana] gi|7486117|pir||T10561
hypothetical protein F25E4.30 - Arabidopsis thaliana
Length = 317
Score = 63.2 bits (152), Expect = 2e-09
Identities = 30/39 (76%), Positives = 32/39 (81%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MWPF KG SGFS STAE+VTHGID +GLTAIVTG SS
Sbjct: 1 MWPFWWKGASGFSARSTAEEVTHGIDGTGLTAIVTGASS 39
>emb|CAB79298.1| putative protein [Arabidopsis thaliana]
gi|3451068|emb|CAA20464.1| putative protein
[Arabidopsis thaliana] gi|7485551|pir||T05381
hypothetical protein F16G20.130 - Arabidopsis thaliana
Length = 294
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>emb|CAB79297.1| putative protein [Arabidopsis thaliana]
gi|3451067|emb|CAA20463.1| putative protein
[Arabidopsis thaliana] gi|7485550|pir||T05380
hypothetical protein F16G20.120 - Arabidopsis thaliana
Length = 175
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>gb|AAN13078.1| unknown protein [Arabidopsis thaliana]
gi|42567066|ref|NP_194073.2| short-chain
dehydrogenase/reductase (SDR) family protein
[Arabidopsis thaliana] gi|42572999|ref|NP_974596.1|
short-chain dehydrogenase/reductase (SDR) family
protein [Arabidopsis thaliana]
gi|51970714|dbj|BAD44049.1| unknown protein
[Arabidopsis thaliana]
Length = 316
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>gb|AAM65772.1| putativepod-specific dehydrogenase SAC25 [Arabidopsis thaliana]
gi|18416145|ref|NP_567681.1| short-chain
dehydrogenase/reductase (SDR) family protein
[Arabidopsis thaliana]
Length = 320
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>ref|NP_849428.1| short-chain dehydrogenase/reductase (SDR) family protein
[Arabidopsis thaliana]
Length = 322
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>gb|AAN64176.1| unknown protein [Arabidopsis thaliana]
Length = 220
Score = 60.8 bits (146), Expect = 9e-09
Identities = 28/39 (71%), Positives = 31/39 (78%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F KG SGFS STAE+VTHG+D +GLTAIVTG SS
Sbjct: 1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASS 39
>gb|AAP54898.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536618|ref|NP_922611.1| hypothetical protein
[Oryza sativa (japonica cultivar-group)]
gi|13876538|gb|AAK43514.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 73
Score = 53.1 bits (126), Expect = 2e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 1 MWPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVT 35
MW F++KG SGFSG STAE+VT GIDA GL A++T
Sbjct: 1 MWRFNRKGPSGFSGASTAEEVTAGIDARGLVAVIT 35
>gb|AAP54899.1| putative WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|37536620|ref|NP_922612.1| putative
WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|13876535|gb|AAK43511.1| putative
WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)]
Length = 320
Score = 52.4 bits (124), Expect = 3e-06
Identities = 24/36 (66%), Positives = 30/36 (82%)
Query: 4 FSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
F++KG SGFSG STAE+VT G+DA GL A++TG SS
Sbjct: 4 FNRKGPSGFSGASTAEEVTAGVDARGLVAVITGASS 39
>gb|AAP54900.1| putative WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|37536622|ref|NP_922613.1| putative
WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|13876532|gb|AAK43508.1| putative
WW-domain oxidoreductase [Oryza sativa (japonica
cultivar-group)]
Length = 319
Score = 51.2 bits (121), Expect = 7e-06
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 1 MW--PFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW F++ G SGFSG STAE+VT G+DA GL A+VTG SS
Sbjct: 1 MWFFNFNRNGPSGFSGASTAEEVTAGVDARGLAAVVTGASS 41
>dbj|BAD46231.1| putative oxidoreductase [Oryza sativa (japonica cultivar-group)]
Length = 315
Score = 49.3 bits (116), Expect = 3e-05
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 2 WPFSKKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
W F + G SGFS STA++VT G+ A+GLTAIVTG SS
Sbjct: 4 WLFRRSGPSGFSWASTADQVTAGLSAAGLTAIVTGASS 41
>ref|NP_909282.1| putative pod-specific dehydrogenase SAC25 [Oryza sativa (japonica
cultivar-group)] gi|13872934|dbj|BAB44039.1| putative
pod-specific dehydrogenase SAC25 [Oryza sativa
(japonica cultivar-group)] gi|9663977|dbj|BAB03618.1|
putative pod-specific dehydrogenase SAC25 [Oryza sativa
(japonica cultivar-group)]
Length = 321
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/34 (64%), Positives = 26/34 (75%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
K G SGF STAE+VT G+DA+GLT IVTG +S
Sbjct: 10 KAGASGFGSGSTAEQVTAGVDATGLTVIVTGGAS 43
>ref|XP_471616.1| OSJNBa0029L02.2 [Oryza sativa (japonica cultivar-group)]
gi|32487575|emb|CAE04461.1| OSJNBa0029L02.2 [Oryza
sativa (japonica cultivar-group)]
Length = 314
Score = 45.4 bits (106), Expect = 4e-04
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 1 MWPFSKKGVS-GFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
MW ++ S GFS +STAE+VT GID SGL A++TG SS
Sbjct: 1 MWGLLRRSSSSGFSSSSTAEEVTAGIDGSGLVALITGASS 40
>emb|CAB85991.1| putative protein [Arabidopsis thaliana] gi|11250521|pir||T48275
hypothetical protein T22P11.130 - Arabidopsis thaliana
Length = 350
Score = 43.9 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTG 36
++G SGF STAE+VT GIDA+ LTAI+TG
Sbjct: 10 RRGPSGFGSASTAEEVTQGIDATNLTAIITG 40
>gb|AAM20410.1| putative oxidoreductase [Arabidopsis thaliana]
gi|3236237|gb|AAC23625.1| putative oxidoreductase
[Arabidopsis thaliana] gi|15224306|ref|NP_181290.1|
short-chain dehydrogenase/reductase (SDR) family
protein [Arabidopsis thaliana] gi|7485438|pir||T02520
probable oxidoreductase [imported] - Arabidopsis
thaliana gi|24899833|gb|AAN65131.1| putative
oxidoreductase [Arabidopsis thaliana]
Length = 321
Score = 43.9 bits (102), Expect = 0.001
Identities = 23/34 (67%), Positives = 25/34 (72%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
KKG SGF STAE VT IDAS LTAI+TG +S
Sbjct: 10 KKGKSGFGSASTAEDVTQAIDASHLTAIITGGTS 43
>ref|NP_568102.1| short-chain dehydrogenase/reductase (SDR) family protein
[Arabidopsis thaliana]
Length = 331
Score = 43.9 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTG 36
++G SGF STAE+VT GIDA+ LTAI+TG
Sbjct: 10 RRGPSGFGSASTAEEVTQGIDATNLTAIITG 40
>gb|AAM63701.1| putativepod-specific dehydrogenase SAC25 [Arabidopsis thaliana]
Length = 331
Score = 42.7 bits (99), Expect = 0.003
Identities = 20/30 (66%), Positives = 24/30 (79%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVT 35
+KG SGF STAE+VT GIDA+ LTAI+T
Sbjct: 10 RKGPSGFGSASTAEEVTQGIDATNLTAIIT 39
>gb|AAX96188.1| short-chain dehydrogenase Tic32 [Oryza sativa (japonica
cultivar-group)]
Length = 329
Score = 42.4 bits (98), Expect = 0.003
Identities = 19/34 (55%), Positives = 26/34 (75%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
+ G SGF G STA++VT G+DAS LT +VTG ++
Sbjct: 12 RNGPSGFGGASTADEVTAGVDASRLTVVVTGATN 45
>emb|CAB58175.1| putative pod-specific dehydrogenase SAC25 [Brassica napus]
gi|629592|pir||S42651 hypothetical protein - rape
Length = 320
Score = 42.0 bits (97), Expect = 0.004
Identities = 21/34 (61%), Positives = 24/34 (69%)
Query: 6 KKGVSGFSGNSTAEKVTHGIDASGLTAIVTGLSS 39
K G SG+ STAE VTH IDA LTAI+TG +S
Sbjct: 10 KAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTS 43
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,565,942
Number of Sequences: 2540612
Number of extensions: 2348254
Number of successful extensions: 7361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7331
Number of HSP's gapped (non-prelim): 30
length of query: 57
length of database: 863,360,394
effective HSP length: 33
effective length of query: 24
effective length of database: 779,520,198
effective search space: 18708484752
effective search space used: 18708484752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146755.12