Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146751.7 + phase: 0 
         (71 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM61713.1| unknown [Arabidopsis thaliana] gi|20334908|gb|AAM...    37  0.13
gb|AAV63848.1| hypothetical protein At1g30475 [Arabidopsis thali...    34  0.86
gb|AAF19750.1| F26G16.9 [Arabidopsis thaliana] gi|25372889|pir||...    34  0.86

>gb|AAM61713.1| unknown [Arabidopsis thaliana] gi|20334908|gb|AAM16210.1|
          At1g56200/F14G9_26 [Arabidopsis thaliana]
          gi|17979541|gb|AAL50105.1| At1g56200/F14G9_26
          [Arabidopsis thaliana] gi|18405726|ref|NP_564712.1|
          expressed protein [Arabidopsis thaliana]
          gi|12321755|gb|AAG50915.1| unknown protein [Arabidopsis
          thaliana] gi|25372888|pir||E96603 unknown protein
          F14G9.26 [imported] - Arabidopsis thaliana
          Length = 154

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 17/28 (60%), Positives = 21/28 (74%)

Query: 3  NARCSAEQTQTVLREAPTITHLPGITEE 30
          NA+CS  QTQTV RE+PTIT  P  ++E
Sbjct: 66 NAKCSEGQTQTVTRESPTITQAPVHSKE 93


>gb|AAV63848.1| hypothetical protein At1g30475 [Arabidopsis thaliana]
           gi|49823476|gb|AAT68721.1| hypothetical protein
           At1g30475 [Arabidopsis thaliana]
           gi|42571701|ref|NP_973941.1| expressed protein
           [Arabidopsis thaliana] gi|45752718|gb|AAS76257.1|
           At1g30475 [Arabidopsis thaliana]
          Length = 162

 Score = 34.3 bits (77), Expect = 0.86
 Identities = 14/23 (60%), Positives = 18/23 (77%)

Query: 3   NARCSAEQTQTVLREAPTITHLP 25
           N++CS  QTQTV R++PTIT  P
Sbjct: 78  NSKCSQGQTQTVTRQSPTITQAP 100


>gb|AAF19750.1| F26G16.9 [Arabidopsis thaliana] gi|25372889|pir||F86429 protein
          F26G16.9 [imported] - Arabidopsis thaliana
          Length = 159

 Score = 34.3 bits (77), Expect = 0.86
 Identities = 14/23 (60%), Positives = 18/23 (77%)

Query: 3  NARCSAEQTQTVLREAPTITHLP 25
          N++CS  QTQTV R++PTIT  P
Sbjct: 75 NSKCSQGQTQTVTRQSPTITQAP 97


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.325    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,543,723
Number of Sequences: 2540612
Number of extensions: 3899284
Number of successful extensions: 10787
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10784
Number of HSP's gapped (non-prelim): 3
length of query: 71
length of database: 863,360,394
effective HSP length: 47
effective length of query: 24
effective length of database: 743,951,630
effective search space: 17854839120
effective search space used: 17854839120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)


Medicago: description of AC146751.7