
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146751.7 + phase: 0
(71 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61713.1| unknown [Arabidopsis thaliana] gi|20334908|gb|AAM... 37 0.13
gb|AAV63848.1| hypothetical protein At1g30475 [Arabidopsis thali... 34 0.86
gb|AAF19750.1| F26G16.9 [Arabidopsis thaliana] gi|25372889|pir||... 34 0.86
>gb|AAM61713.1| unknown [Arabidopsis thaliana] gi|20334908|gb|AAM16210.1|
At1g56200/F14G9_26 [Arabidopsis thaliana]
gi|17979541|gb|AAL50105.1| At1g56200/F14G9_26
[Arabidopsis thaliana] gi|18405726|ref|NP_564712.1|
expressed protein [Arabidopsis thaliana]
gi|12321755|gb|AAG50915.1| unknown protein [Arabidopsis
thaliana] gi|25372888|pir||E96603 unknown protein
F14G9.26 [imported] - Arabidopsis thaliana
Length = 154
Score = 37.0 bits (84), Expect = 0.13
Identities = 17/28 (60%), Positives = 21/28 (74%)
Query: 3 NARCSAEQTQTVLREAPTITHLPGITEE 30
NA+CS QTQTV RE+PTIT P ++E
Sbjct: 66 NAKCSEGQTQTVTRESPTITQAPVHSKE 93
>gb|AAV63848.1| hypothetical protein At1g30475 [Arabidopsis thaliana]
gi|49823476|gb|AAT68721.1| hypothetical protein
At1g30475 [Arabidopsis thaliana]
gi|42571701|ref|NP_973941.1| expressed protein
[Arabidopsis thaliana] gi|45752718|gb|AAS76257.1|
At1g30475 [Arabidopsis thaliana]
Length = 162
Score = 34.3 bits (77), Expect = 0.86
Identities = 14/23 (60%), Positives = 18/23 (77%)
Query: 3 NARCSAEQTQTVLREAPTITHLP 25
N++CS QTQTV R++PTIT P
Sbjct: 78 NSKCSQGQTQTVTRQSPTITQAP 100
>gb|AAF19750.1| F26G16.9 [Arabidopsis thaliana] gi|25372889|pir||F86429 protein
F26G16.9 [imported] - Arabidopsis thaliana
Length = 159
Score = 34.3 bits (77), Expect = 0.86
Identities = 14/23 (60%), Positives = 18/23 (77%)
Query: 3 NARCSAEQTQTVLREAPTITHLP 25
N++CS QTQTV R++PTIT P
Sbjct: 75 NSKCSQGQTQTVTRQSPTITQAP 97
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,543,723
Number of Sequences: 2540612
Number of extensions: 3899284
Number of successful extensions: 10787
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10784
Number of HSP's gapped (non-prelim): 3
length of query: 71
length of database: 863,360,394
effective HSP length: 47
effective length of query: 24
effective length of database: 743,951,630
effective search space: 17854839120
effective search space used: 17854839120
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146751.7