BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146749.13 - phase: 0 /pseudo
         (68 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB02652.1| unnamed protein product [Arabidopsis thaliana]         37  0.13
gb|AAM13055.1| unknown protein [Arabidopsis thaliana] gi|2508351...    37  0.13
ref|NP_974315.1| NHL repeat-containing protein [Arabidopsis thal...    37  0.13

>dbj|BAB02652.1| unnamed protein product [Arabidopsis thaliana]
          Length = 511

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F +N
Sbjct: 326 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 362


>gb|AAM13055.1| unknown protein [Arabidopsis thaliana] gi|25083516|gb|AAN72090.1|
           unknown protein [Arabidopsis thaliana]
           gi|22331093|ref|NP_188104.2| NHL repeat-containing
           protein [Arabidopsis thaliana]
          Length = 492

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F +N
Sbjct: 307 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 343


>ref|NP_974315.1| NHL repeat-containing protein [Arabidopsis thaliana]
          Length = 493

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F +N
Sbjct: 308 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 344


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.310    0.126    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,636,001
Number of Sequences: 2540612
Number of extensions: 2491774
Number of successful extensions: 6686
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6686
Number of HSP's gapped (non-prelim): 3
length of query: 68
length of database: 863,360,394
effective HSP length: 44
effective length of query: 24
effective length of database: 751,573,466
effective search space: 18037763184
effective search space used: 18037763184
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)