BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146743.13 + phase: 0
(492 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_477474.1| RRM-containing RNA-binding protein-like [Oryza ... 690 0.0
ref|XP_493940.1| ESTs AU082563(S20379),D15187(C0226), AU082476(C... 687 0.0
ref|NP_563788.1| zinc finger (CCCH-type) family protein / RNA re... 679 0.0
gb|AAM47951.1| unknown protein [Arabidopsis thaliana] gi|1545087... 678 0.0
gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana] gi|39803... 673 0.0
dbj|BAB11164.1| RNA-binding protein-like [Arabidopsis thaliana] ... 463 e-129
gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio] gi|496... 383 e-105
ref|NP_989108.1| hypothetical protein LOC394713 [Xenopus tropica... 377 e-103
gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct... 377 e-103
ref|XP_546302.1| PREDICTED: similar to RNA binding motif protein... 377 e-103
gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct] 377 e-103
dbj|BAB31220.1| unnamed protein product [Mus musculus] 377 e-103
gb|AAH97991.1| Unknown (protein for MGC:116134) [Rattus norvegicus] 376 e-103
gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis] 375 e-102
emb|CAH91075.1| hypothetical protein [Pongo pygmaeus] 375 e-102
ref|NP_001006151.1| similar to RNA binding motif protein 22 [Gal... 374 e-102
ref|XP_395009.2| PREDICTED: similar to Hypothetical protein MGC7... 372 e-101
ref|XP_545027.1| PREDICTED: similar to RNA binding motif protein... 369 e-100
ref|XP_313808.2| ENSANGP00000012203 [Anopheles gambiae str. PEST... 358 2e-97
gb|AAF52166.2| CG14641-PA [Drosophila melanogaster] gi|28573264|... 357 4e-97
>ref|XP_477474.1| RRM-containing RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)] gi|34394813|dbj|BAC84225.1|
RRM-containing RNA-binding protein-like [Oryza sativa
(japonica cultivar-group)]
Length = 486
Score = 690 bits (1781), Expect = 0.0
Identities = 355/489 (72%), Positives = 387/489 (78%), Gaps = 30/489 (6%)
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHRLLRD +ADGWERSDFPIICESCLGD+PYVRM +AEYDKECKIC RPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTALS +SNDAIP+SDVNREYFAE
Sbjct: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDR+ARAGIDY+SS GKAR NDTILKLQRT PYYKRNRAH+CSFY RGECTRGAECPYR
Sbjct: 121 EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMP TGELSQQNIKDRYYGVNDPVA+KLL KAGEM SL P+DESI+TLY+GGLD+RVT
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT 240
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQDLRD FYAHGEIE+++MVLQRACAFVTYTTREGAEKAAEEL+NKLVIKG+RLKLMWG+
Sbjct: 241 EQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGK 300
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQ--GM----------LYYNN 348
PQ+ KPE D+A +Q VAH G+ PRAVISQQQ+ DQ Q GM Y+N
Sbjct: 301 PQAPKPEE---DEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQPASASYYFNI 357
Query: 349 PPPPQQERNYYPSMDPQRMGALLPSQ--DGPPGGPSGSGENKPSSEKQQMQHYGRPMMPP 406
P PP ER YPSMDPQRMGAL+ SQ DG P GP +G+ + SS Q P PP
Sbjct: 358 PAPPAAERTLYPSMDPQRMGALVESQEGDGKP-GPQQAGQGQASSSSGQ----SYPEPPP 412
Query: 407 PQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANH--PYQHPMQ 464
P YH YPPY YPP PP PYQQ PPQY A P PPA + Q P
Sbjct: 413 P--YYHGGQYPPY--YPPYGGYMPPPRMPYQQ-PPQYPAYQPMLAPPAQSQASSLQQP-A 466
Query: 465 PGSSQTGSG 473
P + Q G G
Sbjct: 467 PATQQLGQG 475
>ref|XP_493940.1| ESTs AU082563(S20379),D15187(C0226),
AU082476(C0226),AU082563(S20379) correspond to a region
of the predicted gene.~Similar to Arabidopsis thaliana
chromosome 2 BAC F16P2; putative RNA-binding protein.
(AC004561) [Oryza sativa (japonica cultivar-group)]
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding
protein-like [Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 687 bits (1774), Expect = 0.0
Identities = 359/496 (72%), Positives = 390/496 (78%), Gaps = 46/496 (9%)
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHRLLRD +ADGWERSDFPIICESCLGD+PYVRM +AEYDKECKIC RPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+I+SNDAIP+SDVNREYFAE
Sbjct: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAE 120
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDRKARAGIDY+SS GKARPNDTILKLQRT PYYKRNRAH+CSFY RGECTRGAECPYR
Sbjct: 121 EHDRKARAGIDYDSSHGKARPNDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMP TGELSQQNIKDRYYGVNDPVA+KLLGKAGEM SL P+DESI+TLY+GGL+ R+T
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMPSLTPPDDESIRTLYIGGLNNRIT 240
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQDLRD FYAHGEIES++MVLQRACAFVTYTTREGAEKAAEEL+NKLVIKG+RLKLMWG+
Sbjct: 241 EQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGIRLKLMWGK 300
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQ------------GMLYYNN 348
PQ+ KPE D+A +Q VAH G+ PRAVISQQQ+ DQ Q G Y+N
Sbjct: 301 PQAPKPED---DEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQQAPSGSYYFNI 357
Query: 349 PPPPQQERNYYPSMDPQRMGALLPSQ--DGPPGGPSGSGENKPSSEKQQMQHYGRPMMPP 406
P PP ER YPSMDPQRMGAL+ SQ DG P GP + + + SS Q PM P
Sbjct: 358 PAPPGAERTLYPSMDPQRMGALVKSQEGDGKP-GPQQAAQAQASSSSGQ----SYPMPP- 411
Query: 407 PQGQYHHQYYPPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPM--Q 464
QY+H YPPY YPP Y MP PP YP PPPQ P PYQ PM
Sbjct: 412 ---QYYHGQYPPY--YPP-YGGYMP--PPRMPYP-------PPPQYP----PYQ-PMLAT 451
Query: 465 PGSSQTGSGQAGSAPA 480
P SQ S Q APA
Sbjct: 452 PAQSQASSSQQ-PAPA 466
>ref|NP_563788.1| zinc finger (CCCH-type) family protein / RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
gi|25406972|pir||F86208 protein F22G5.30 [imported] -
Arabidopsis thaliana gi|8778549|gb|AAF79557.1| F22G5.30
[Arabidopsis thaliana]
Length = 481
Score = 679 bits (1751), Expect = 0.0
Identities = 341/491 (69%), Positives = 380/491 (76%), Gaps = 17/491 (3%)
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHR+LRDHEADGWERSDFPIICESCLGD+PYVRMTKA YDKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+IS++D+IPKSDVNREYFAE
Sbjct: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE 120
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDRKARAG+DYESSFGK RPNDTILKLQRTTPYYKRNRAH+CSF+ RGECTRGAECPYR
Sbjct: 121 EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR 180
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMP TGELSQQNIKDRYYGVNDPVAMKLLGKAGEM +LE P+DESIKTLYVGGL++R+
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL 240
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQD+RD FYAHGEIES++++ +ACAFVTYT+REGAEKAA+ELSN+LVI G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR 300
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYP 360
P KP+ DG A QQ VAHSGL PRAVISQQ NQ YY +PPP Q++ YYP
Sbjct: 301 P---KPDQDG---ANQQGGVAHSGLLPRAVISQQHNQPPPMQQ-YYMHPPPANQDKPYYP 353
Query: 361 SMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQY---HHQYYP 417
SMDPQRMGA++ +Q+ GG S SS H P PPP G + Q YP
Sbjct: 354 SMDPQRMGAVISTQEA--GGSSTENNGASSSSYMMPPHQSYP--PPPYGYMPSPYQQQYP 409
Query: 418 P---YQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQ 474
P +Q P Q+ A P PY Q P + P P +A P P G+ S Q
Sbjct: 410 PNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTAVSAISPDSAPAGSGAPSGSSQQ 469
Query: 475 AGSAPAETGTS 485
A TG+S
Sbjct: 470 APDVSTATGSS 480
>gb|AAM47951.1| unknown protein [Arabidopsis thaliana] gi|15450878|gb|AAK96710.1|
Unknown protein [Arabidopsis thaliana]
Length = 481
Score = 678 bits (1750), Expect = 0.0
Identities = 341/491 (69%), Positives = 380/491 (76%), Gaps = 17/491 (3%)
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHR+LRDHEADGWERSDFPIICESCLGD+PYVRMTKA YDKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+EICQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+IS++D+IPKSDVNREYFAE
Sbjct: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE 120
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDRKARAG+DYESSFGK RPNDTILKLQRTTPYYKRNRAH+CSF+ RGECTRGAECPYR
Sbjct: 121 EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR 180
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMP TGELSQQNIKDRYYGVNDPVAMKLLGKAGEM +LE P+DESIKTLYVGGL++R+
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL 240
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQD+RD FYAHGEIES++++ +ACAFVTYT+REGAEKAA+ELSN+LVI G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR 300
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYP 360
P KP+ DG A QQ VAHSGL PRAVISQQ NQ YY +PPP Q++ YYP
Sbjct: 301 P---KPDRDG---ANQQGGVAHSGLLPRAVISQQHNQPPPMQQ-YYMHPPPANQDKPYYP 353
Query: 361 SMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQY---HHQYYP 417
SMDPQRMGA++ +Q+ GG S SS H P PPP G + Q YP
Sbjct: 354 SMDPQRMGAVISTQEA--GGSSTENNGASSSSYMMPPHQSYP--PPPYGYMPSPYQQQYP 409
Query: 418 P---YQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSGQ 474
P +Q P Q+ A P PY Q P + P P +A P P G+ S Q
Sbjct: 410 PNHHHQPSPMQHYAPPPAAYPYPQQPGPGSRPAPSPTAVSAISPDSAPAGSGAPSGSSQQ 469
Query: 475 AGSAPAETGTS 485
A TG+S
Sbjct: 470 APDVSTATGSS 480
>gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana] gi|3980378|gb|AAC95181.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|16226863|gb|AAL16284.1| At2g29580/F16P2.4
[Arabidopsis thaliana] gi|25408035|pir||A84698 probable
RNA-binding protein [imported] - Arabidopsis thaliana
gi|15227567|ref|NP_180518.1| zinc finger (CCCH-type)
family protein / RNA recognition motif (RRM)-containing
protein [Arabidopsis thaliana]
Length = 483
Score = 673 bits (1737), Expect = 0.0
Identities = 342/499 (68%), Positives = 383/499 (76%), Gaps = 35/499 (7%)
Query: 1 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGR 60
MAHR+LRDHEADGWERSDFPIICESCLGD+PYVRMTKA YDKECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60
Query: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAE 120
DARYKK+E+CQTC KLKNVCQVCLLDLEYGLPVQVRDTAL+IS++D+IPKSDVNRE+FAE
Sbjct: 61 DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAE 120
Query: 121 EHDRKARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYR 180
EHDRK RAG+DYESSFGK RPNDTI LQRTTPYYKRNRAHICSF+ RGECTRG ECPYR
Sbjct: 121 EHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYR 180
Query: 181 HEMPVTGELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVT 240
HEMP TGELSQQNIKDRYYGVNDPVA+KLLGKAGEM +LE PED+SI+TLYVGGL++RV
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVL 240
Query: 241 EQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR 300
EQD+RD FYAHGEIES++++ ++ACAFVTYTTREGAEKAAEELSN+LV+ G RLKL WGR
Sbjct: 241 EQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGR 300
Query: 301 PQSAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQ---QERN 357
PQ KP+ DG + QQ SVAHSGL PRAVISQQQNQ + YY +PPPPQ Q+R
Sbjct: 301 PQVPKPDQDG---SNQQGSVAHSGLLPRAVISQQQNQPPPM-LQYYMHPPPPQPPHQDRP 356
Query: 358 YYPSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQY-HHQYY 416
+YPSMDPQRMGA+ S++ G S S SS M PP G Y HQ Y
Sbjct: 357 FYPSMDPQRMGAVSSSKE---SGSSTSDNRGASSSSYTM---------PPHGHYPQHQPY 404
Query: 417 PPYQQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQT---GSG 473
P PP Y M PPYQQYPP ++ A+H Y PGS S
Sbjct: 405 P-----PPSYGGYMQ--PPYQQYPPYHHG-----HSQQADHDYPQQPGPGSRPNPPHPSS 452
Query: 474 QAGSAPAETGTSTSGSQEQ 492
+ P + SGS +Q
Sbjct: 453 VSAPPPDSVSAAPSGSSQQ 471
>dbj|BAB11164.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|15240684|ref|NP_196323.1| zinc finger (CCCH-type)
family protein [Arabidopsis thaliana]
Length = 363
Score = 463 bits (1191), Expect = e-129
Identities = 243/420 (57%), Positives = 291/420 (68%), Gaps = 67/420 (15%)
Query: 7 RDHEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKK 66
RDH ADGWE +DFPI CESC GD+PY+RMT+A+YDKECKIC+RPFT FRWRPGR+AR+KK
Sbjct: 4 RDHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGRNARFKK 63
Query: 67 SEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA 126
+EICQTCSKLKNVCQVCLLDL +GLPVQVRD+AL+I+S+ ++P S VNREYFA+EHD K
Sbjct: 64 TEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFADEHDPKT 123
Query: 127 RAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPVT 186
RAG+DYESSFGK +PNDTILKLQR TP Y++NR ICSFYT G+C RGAEC +RHEMP T
Sbjct: 124 RAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFRHEMPET 183
Query: 187 GELSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQDLRD 246
GELS QNI+DRYY VNDPVAMKLL KAGEM +LE PEDESIKTLYVGGL++R+ EQD+ D
Sbjct: 184 GELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIFEQDIHD 243
Query: 247 NFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQSAKP 306
+FYA+GE+ES++++ + K
Sbjct: 244 HFYAYGEMESIRVM----------------------------------------AEDGKY 263
Query: 307 ESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYPSMDPQR 366
+ G +Q +QQ S+AH+GL ISQQQNQ +Q YY PPPP E ++YPSMD QR
Sbjct: 264 DQSGSNQ-QQQGSIAHTGL-----ISQQQNQ-HSQMQQYYMQPPPP-NEYSHYPSMDTQR 315
Query: 367 MGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPYQQYPPQY 426
MGA +Q+ G S S N+ S Y PM P HQ YP PP Y
Sbjct: 316 MGAAFSTQES--DGSSTSENNRAYSS------YSYPMPP-------HQPYPT----PPPY 356
>gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio]
gi|49619055|gb|AAT68112.1| FLJ10290-like [Danio rerio]
gi|47086019|ref|NP_998379.1| RNA binding motif protein
22 [Danio rerio]
Length = 425
Score = 383 bits (984), Expect = e-105
Identities = 215/474 (45%), Positives = 280/474 (58%), Gaps = 69/474 (14%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE SDFPI+C++CLG++PY+RMTK ++ KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSK+KNVCQ CLLDLEYGLP+QVRDT LS+ D +P+SDVN+EY+ + +R+
Sbjct: 70 VCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSV--KDEVPRSDVNKEYYTQNMEREIAN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+VP+D+SI TLY+GGL VT+ +
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLGENVTDSE 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL+I G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNVKWGRSQA 307
Query: 304 A--KPESDGLDQA--RQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYY 359
A K E DG+ ++ R + G P +S D+ Y+N P P
Sbjct: 308 ARGKGEKDGVTESGIRLEPVPGLPGALPPPPVS-----DEDASTNYFNLAPTP------- 355
Query: 360 PSMDPQRMGALLPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPPQGQYHHQYYPPY 419
P M LP PP G + MPPP G
Sbjct: 356 ---SPAVMNLGLP----PPPGVT---------------------MPPPPG---------- 377
Query: 420 QQYPPQYNAAMPPVPPYQQYPPQYNAAMPPPQPPAANHPYQHPMQPGSSQTGSG 473
PP ++ P PP PP A PP Q ++P Q P + G+ + G
Sbjct: 378 -FGPPMFHTMDPMAPPVP--PPM--ALRPPGQ---VHYPSQDPQRMGAHASRHG 423
>ref|NP_989108.1| hypothetical protein LOC394713 [Xenopus tropicalis]
gi|38566013|gb|AAH62518.1| Hypothetical protein MGC76229
[Xenopus tropicalis]
Length = 417
Score = 377 bits (968), Expect = e-103
Identities = 205/426 (48%), Positives = 265/426 (62%), Gaps = 47/426 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD S+ D +P+SDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGASL--KDEMPRSDVNKEYYTQNMEREIAN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G + GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED+SI TLYVGGL ++E +
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESE 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQER---NYYP 360
A+ G ++ R +S L P + G L PPPP +E NY+
Sbjct: 308 AR----GKERERDGSSDPGMKLEPVPGL---------PGAL----PPPPTEEESSANYF- 349
Query: 361 SMDPQRMGAL----LPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP----QGQYH 412
++ P AL LP G G P G G H PM PPP G H
Sbjct: 350 NLPPNGSAALVNISLPPPPGLSGPPPGYG-----------PHMFPPMAPPPFLRAPGHIH 398
Query: 413 HQYYPP 418
+ P
Sbjct: 399 YPSQDP 404
>gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct]
gi|12053361|emb|CAB66867.1| hypothetical protein [Homo
sapiens] gi|67971284|dbj|BAE01984.1| unnamed protein
product [Macaca fascicularis] gi|51480449|gb|AAH80205.1|
Rbm22 protein [Mus musculus] gi|7022226|dbj|BAA91521.1|
unnamed protein product [Homo sapiens]
gi|13097297|gb|AAH03402.1| RNA binding motif protein 22
[Homo sapiens] gi|8922328|ref|NP_060517.1| RNA binding
motif protein 22 [Homo sapiens]
gi|63723932|ref|XP_619541.1| PREDICTED: RNA binding
motif protein 22 [Mus musculus]
gi|26337089|dbj|BAC32229.1| unnamed protein product [Mus
musculus]
Length = 420
Score = 377 bits (967), Expect = e-103
Identities = 201/413 (48%), Positives = 254/413 (60%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ E DG A ++AS V + L P
Sbjct: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPP 367
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>ref|XP_546302.1| PREDICTED: similar to RNA binding motif protein 22 [Canis
familiaris]
Length = 755
Score = 377 bits (967), Expect = e-103
Identities = 201/413 (48%), Positives = 254/413 (60%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 345 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 404
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 405 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 462
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 463 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 522
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 523 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 582
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 583 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 642
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ E DG A ++AS V + L P
Sbjct: 643 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPP 702
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 703 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 755
>gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct]
Length = 421
Score = 377 bits (967), Expect = e-103
Identities = 201/413 (48%), Positives = 254/413 (60%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ E DG A ++AS V + L P
Sbjct: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPP 367
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKDSSP 420
>dbj|BAB31220.1| unnamed protein product [Mus musculus]
Length = 420
Score = 377 bits (967), Expect = e-103
Identities = 201/413 (48%), Positives = 254/413 (60%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ E DG A ++AS V + L P
Sbjct: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPLAAEEEASANYFNLPPSGPPAVVNIALPP 367
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>gb|AAH97991.1| Unknown (protein for MGC:116134) [Rattus norvegicus]
Length = 420
Score = 376 bits (966), Expect = e-103
Identities = 203/412 (49%), Positives = 258/412 (62%), Gaps = 43/412 (10%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI +V +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQER----NYY 359
A+ + +++ SG+ + + G L PPPP E NY+
Sbjct: 308 AR------GKEKEKDGTTDSGI-------KLEPVPGLPGAL----PPPPAAEEEASANYF 350
Query: 360 ---PSMDPQRMGALLPSQDG-PPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
PS P + LP G P P G G H PM PPP
Sbjct: 351 NLPPSGPPAVVNIALPPPPGIAPPPPPGFG-----------PHLFHPMGPPP 391
>gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis]
Length = 417
Score = 375 bits (963), Expect = e-102
Identities = 202/426 (47%), Positives = 265/426 (61%), Gaps = 47/426 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRDT +S+ D +P+SDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDTGVSL--KDEMPRSDVNKEYYTQNMEREIAN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G + GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDR+YG+NDPVA KLL +A M L+ PED+SI TLYVGGL ++E +
Sbjct: 188 DPDDPLADQNIKDRFYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESE 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQER---NYYP 360
A+ + R+ G+ + + G L PPPP +E NY+
Sbjct: 308 AR------GKEREHDGSGDPGM-------KFEPVPGLPGAL----PPPPTEEESSANYF- 349
Query: 361 SMDPQRMGAL----LPSQDGPPGGPSGSGENKPSSEKQQMQHYGRPMMPPP----QGQYH 412
++ P AL LP G G P G G H PM PPP G H
Sbjct: 350 NLPPNGSAALVNISLPPPPGLSGPPPGFG-----------PHMFPPMAPPPFLRAPGHIH 398
Query: 413 HQYYPP 418
+ P
Sbjct: 399 YPSQDP 404
>emb|CAH91075.1| hypothetical protein [Pongo pygmaeus]
Length = 420
Score = 375 bits (963), Expect = e-102
Identities = 200/413 (48%), Positives = 254/413 (61%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+R+TK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRVTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKDRYYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ E DG A ++AS V + L P
Sbjct: 308 ARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPP 367
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 368 PPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>ref|NP_001006151.1| similar to RNA binding motif protein 22 [Gallus gallus]
gi|53127796|emb|CAG31227.1| hypothetical protein [Gallus
gallus]
Length = 420
Score = 374 bits (961), Expect = e-102
Identities = 197/413 (47%), Positives = 257/413 (61%), Gaps = 46/413 (11%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS+ D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSL--KDEMPKSDVNKEYYTQNMEREIAN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G + GKA +D +LKL RTTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ Q+IKDRYYG+NDPVA KLL +A M L+ P+D++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQDIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLGDTITESD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AK---PESDGLDQ--------------------ARQQAS-------------VAHSGLFP 327
A+ + +G + A ++AS V + L P
Sbjct: 308 ARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPP 367
Query: 328 RAVISQQQNQDQTQGMLYYNNPPPPQQERN---YYPSMDPQRMGALLPSQDGP 377
I+ M + PPPP +YPS DPQRMGA P
Sbjct: 368 PPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>ref|XP_395009.2| PREDICTED: similar to Hypothetical protein MGC76229 [Apis
mellifera]
Length = 411
Score = 372 bits (954), Expect = e-101
Identities = 199/396 (50%), Positives = 249/396 (62%), Gaps = 40/396 (10%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE ++FPI+C++CLGD+PY+RMTK Y KECKIC RPFTVFRW PG R+KK+E
Sbjct: 10 YNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPGARMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKARA 128
+CQTCS+LKNVCQ CLLDLEYGLP+QVRD AL I D +P+SDVN+EY+ + D +
Sbjct: 70 VCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKI--KDDLPRSDVNKEYYVQNIDSEI-G 126
Query: 129 GIDYESSFG----KARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMP 184
ID S G A +D ++KL RT+PYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 127 KIDPTSPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECPYRHEKP 186
Query: 185 VTGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQ 242
+ L+ QNIKDRYYGVNDPVA KL+ +A M L+ PED+SI TLYVG L +TE+
Sbjct: 187 TDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYVGNLGDVLTEK 246
Query: 243 DLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQ 302
LRD+FY +GEI SV MV ++ CAF+ YT R AE AAE NKL++ G RL + WGR Q
Sbjct: 247 QLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQ 306
Query: 303 SAKPESDGLDQARQQASVAHSGL------FPRAVISQQQNQDQTQGML------------ 344
+ S +A ++ GL P ++ + N T GM+
Sbjct: 307 GRQTVSAA--EATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMIPPMMIPPPPVAP 364
Query: 345 YYNNPP-----------PPQQERNYYPSMDPQRMGA 369
Y PP PP +YPS DP RMGA
Sbjct: 365 QYMFPPQMAPATATPIFPPGTAPIHYPSQDPSRMGA 400
>ref|XP_545027.1| PREDICTED: similar to RNA binding motif protein 22 [Canis
familiaris]
Length = 419
Score = 369 bits (947), Expect = e-100
Identities = 197/411 (47%), Positives = 256/411 (61%), Gaps = 42/411 (10%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE +DFPI+C++CLG++PY+RMTK +Y KECKIC RPFTVFRW PG +KK+E
Sbjct: 10 YNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMHFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKA-- 126
+CQTCSKLKNVCQ CLLDLEYGLP+QVRD LS D +PKSDVN+EY+ + +R+
Sbjct: 70 VCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSF--KDDMPKSDVNKEYYTQNMEREISN 127
Query: 127 RAGIDYESSFGKA-RPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G GKA ++ +LKL +TTPYYKRNR HICSF+ +GEC RG ECPYRHE P
Sbjct: 128 SDGTRPVGMLGKATSTSNMLLKLAQTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPT 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L+ QNIKD+YYG+NDPVA KLL +A M L+ PED++I TLYVGGL +TE D
Sbjct: 188 DPDDPLADQNIKDQYYGINDPVADKLLKRASTMPHLDPPEDKTITTLYVGGLGDTITETD 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQS 303
LR++FY GEI ++ +V ++ CAF+ + TR+ AE AAE+ NKL++ G RL + WGR Q+
Sbjct: 248 LRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQA 307
Query: 304 AKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQER----NYY 359
A+ + +++ SG+ + + G L PPPP E NY+
Sbjct: 308 AR------GKEKEKDGTTDSGI-------KLEPVPGLPGAL----PPPPAAEEETSANYF 350
Query: 360 --PSMDPQRMGALLPSQDG-PPGGPSGSGENKPSSEKQQMQHYGRPMMPPP 407
P P + LP G P P G G H PM PPP
Sbjct: 351 NLPPSGPPAVNIALPPPPGIAPPPPPGFG-----------PHMFHPMGPPP 390
>ref|XP_313808.2| ENSANGP00000012203 [Anopheles gambiae str. PEST]
gi|55240887|gb|EAA09240.2| ENSANGP00000012203 [Anopheles
gambiae str. PEST]
Length = 435
Score = 358 bits (920), Expect = 2e-97
Identities = 204/438 (46%), Positives = 257/438 (58%), Gaps = 43/438 (9%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE S+FPI+C++CLGD+PYVRM K Y KECKICTRPFT+FRW PG R+KK+E
Sbjct: 10 YNRQNWEDSEFPILCQTCLGDNPYVRMIKERYGKECKICTRPFTIFRWCPGARMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKARA 128
ICQTCSKLKNVCQ CLLDLEYGLP QVRD AL I D IP+SDVN+E++ + + + +A
Sbjct: 70 ICQTCSKLKNVCQTCLLDLEYGLPTQVRDAALKI--QDKIPESDVNKEFYIQNIESQLKA 127
Query: 129 GIDYESSFG----KARPNDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMP 184
G D + G +D + KL RT PYYKRN HICSF+ +GEC RG ECPYRH+ P
Sbjct: 128 GGDNTVAAGTVGKSLAASDMLAKLARTAPYYKRNLPHICSFWVKGECKRGEECPYRHDKP 187
Query: 185 VTGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQ 242
V + LS+QNI+DRYYG NDPVA KL+ +A + +L+ PED++I TLYVG L +TE
Sbjct: 188 VEPDDPLSEQNIRDRYYGRNDPVADKLMKRAASIPTLDPPEDKTITTLYVGNLGEHITEV 247
Query: 243 DLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQ 302
D+RDNFY +GEI SV +V ++ CAFV YT R AE AAE+ NKLV+ G +L + W
Sbjct: 248 DIRDNFYHYGEIRSVSLVPRQQCAFVQYTKRAAAELAAEKTFNKLVLGGKKLTIKWAH-- 305
Query: 303 SAKPESDGLDQARQQASVAHSGLFPRAVISQQQNQDQTQGMLYYNNPPPPQQERNYYPSM 362
QA+ A +S PR + D G+ P P +Y+ ++
Sbjct: 306 ---------SQAKSTAYAQNSA--PRGGGGSSRIFDPVPGL--PGQLPMPPNPTDYF-NL 351
Query: 363 DPQRMGALLPS---QDGPPGGPSGSGENKPS-SEKQQMQHYGRPMMPPP------QGQYH 412
M L P PPG G+ PS + Q Q G P P G
Sbjct: 352 QASEMAVLPPGMKIHQLPPGLIPGA----PSYASMYQQQQAGGPSAGPSTSSVGNSGGSG 407
Query: 413 HQYYPPYQQ-----YPPQ 425
H PP Q YP Q
Sbjct: 408 HGMVPPAMQQQQLHYPSQ 425
>gb|AAF52166.2| CG14641-PA [Drosophila melanogaster] gi|28573264|ref|NP_649440.3|
CG14641-PA [Drosophila melanogaster]
gi|16769690|gb|AAL29064.1| LD46870p [Drosophila
melanogaster]
Length = 418
Score = 357 bits (917), Expect = 4e-97
Identities = 192/412 (46%), Positives = 250/412 (60%), Gaps = 55/412 (13%)
Query: 9 HEADGWERSDFPIICESCLGDSPYVRMTKAEYDKECKICTRPFTVFRWRPGRDARYKKSE 68
+ WE ++FPI+C++CLGD+PYVRM K + KECKICTRPFT+FRW PG R+KK+E
Sbjct: 10 YNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPGARMRFKKTE 69
Query: 69 ICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSNDAIPKSDVNREYFAEEHDRKARA 128
ICQTC++LKNVCQ CLLDLEYGLP+QVRD AL ++ N +P+SDVN+EY+ + D + +
Sbjct: 70 ICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKVADN--MPQSDVNKEYYIQNIDAQLQD 127
Query: 129 GIDYESSFGKARP---NDTILKLQRTTPYYKRNRAHICSFYTRGECTRGAECPYRHEMPV 185
G E++ R N+ + KL RT PYYKRNR HICSF+ +GEC RG ECPYRH+ P
Sbjct: 128 GDGTEAAGAVGRSLAANEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECPYRHDKPN 187
Query: 186 TGE--LSQQNIKDRYYGVNDPVAMKLLGKAGEMSSLEVPEDESIKTLYVGGLDARVTEQD 243
+ L +QNIKDRYYG NDPVA K++ +A + +LE PED +I TLYVG L +TE +
Sbjct: 188 EPDDPLCEQNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLPEEITEPE 247
Query: 244 LRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR--- 300
LRD FY GEI S+ +V ++ CAFV YT R AE AAE NKLVI+G ++ + W
Sbjct: 248 LRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVIQGRKVSIKWAHSQA 307
Query: 301 ------------------PQSAKPESDGLDQARQQASVAHSGL----FPRAVI--SQQQN 336
P SAKP +D + ++Q +V +G+ P ++ S Q
Sbjct: 308 KQGTAAKTDRRFDLAGIPPPSAKP-NDYFNLRQEQINVMPAGMKLHQLPSNLVPASAYQM 366
Query: 337 QDQTQGMLYYNN------------------PPPPQQERNYYPSMDPQRMGAL 370
Q Y N PPPP Q YPS D RMGA+
Sbjct: 367 YGQPTYAAPYGNATSTALSSSGVNLDSISIPPPPGQVP--YPSQDASRMGAV 416
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 970,215,995
Number of Sequences: 2540612
Number of extensions: 47671655
Number of successful extensions: 316337
Number of sequences better than 10.0: 10306
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 9263
Number of HSP's that attempted gapping in prelim test: 214299
Number of HSP's gapped (non-prelim): 43962
length of query: 492
length of database: 863,360,394
effective HSP length: 132
effective length of query: 360
effective length of database: 527,999,610
effective search space: 190079859600
effective search space used: 190079859600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)
Medicago: description of AC146743.13