BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146722.7 + phase: 1 /pseudo/partial
(293 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T07672 cyclin a2-type, mitosis-specific - soybean gi|857395... 347 2e-94
dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] gi|7438492|pir... 301 1e-80
emb|CAB46642.1| cyclin A2 [Lycopersicon esculentum] 295 8e-79
emb|CAA83277.1| cyclin 3b [Arabidopsis thaliana] 291 1e-77
ref|NP_568248.2| cyclin, putative (CYC3b) [Arabidopsis thaliana] 291 2e-77
ref|NP_178153.1| cyclin, putative [Arabidopsis thaliana] gi|1232... 270 5e-71
pir||S53003 mitosis-specific cyclin CYC1 - rape gi|562188|gb|AAA... 267 3e-70
emb|CAA83460.1| cyclin 3a [Arabidopsis thaliana] 265 2e-69
gb|AAM20367.1| putative cyclin protein [Arabidopsis thaliana] gi... 260 3e-68
gb|AAF71982.1| Putative cyclin [Arabidopsis thaliana] gi|2529418... 259 6e-68
dbj|BAA11560.1| cyclin [Adiantum capillus-veneris] 254 2e-66
dbj|BAC56853.1| cyclin A1 [Silene latifolia] 223 4e-57
pir||C57742 cyclin II - maize gi|516550|gb|AAA20237.1| cyclin IIZm 220 4e-56
emb|CAB46641.1| cyclin A1 [Lycopersicon esculentum] 218 1e-55
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum] gi|743... 218 2e-55
ref|NP_175077.1| cyclin, putative [Arabidopsis thaliana] gi|1232... 216 5e-55
gb|AAM61486.1| Cyclin, putative [Arabidopsis thaliana] gi|213604... 215 1e-54
dbj|BAB08272.1| cyclin A-type [Arabidopsis thaliana] gi|15239172... 213 4e-54
pir||S53004 mitosis-specific cyclin CYC2 - rape gi|562190|gb|AAA... 207 4e-52
gb|AAT73638.1| 'unknown protein, contains cyclins regulate cycli... 203 4e-51
>pir||T07672 cyclin a2-type, mitosis-specific - soybean
gi|857395|dbj|BAA09465.1| mitotic cyclin a2-type
[Glycine max]
Length = 469
Score = 347 bits (890), Expect = 2e-94
Identities = 180/279 (64%), Positives = 214/279 (76%), Gaps = 5/279 (1%)
Query: 1 INLICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQD 60
I++ICEKL AS L IVDIDS+L+D +W+ YAPDIY+NI V E +R+PL NYM+ LQ+D
Sbjct: 173 IDIICEKLGASDSLTIVDIDSELKDPQLWSFYAPDIYSNIRVTELQRKPLTNYMDKLQKD 232
Query: 61 ITPGMRGILVDWLVEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHA 117
I P MRGILVDWLVEV++E+KLVP T+ + + S V + +
Sbjct: 233 INPSMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRYLSTRLIQKQKLQLLGVTCMLIAS 292
Query: 118 DFIYEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQ 177
YEE+CAP VE+FC ITDNTY+++EVLKME+EVLNL+HFQL+VPTIKTFLRRFIQ AQ
Sbjct: 293 K--YEEMCAPRVEEFCFITDNTYTKEEVLKMEREVLNLVHFQLSVPTIKTFLRRFIQAAQ 350
Query: 178 TSSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEH 237
+S K +LEFLANYLAELALVE SF QF PS IAAS+V LA+WTLN+SEHPWNPTLEH
Sbjct: 351 SSYKAPYVELEFLANYLAELALVECSFFQFLPSLIAASAVFLAKWTLNESEHPWNPTLEH 410
Query: 238 YTNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQK 276
YT YKAS+LKT VL L DLQLNTK C LNAVREKY+ QK
Sbjct: 411 YTKYKASDLKTVVLALQDLQLNTKGCFLNAVREKYKQQK 449
>dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] gi|7438492|pir||T03609 cyclin,
A-type - common tobacco
Length = 493
Score = 301 bits (772), Expect = 1e-80
Identities = 156/280 (55%), Positives = 194/280 (68%), Gaps = 5/280 (1%)
Query: 4 ICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITP 63
+C+K LGI DIDS+ +D + + YAPDIY N+H E +R P +Y+E LQ DI
Sbjct: 203 VCQKQEGFANLGIADIDSRHKDPLMCSLYAPDIYNNLHAIEFDRSPSVDYLEKLQLDINK 262
Query: 64 GMRGILVDWLVEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI 120
GMRGIL+DWLVEV++E++LVP T+ + S + V + + F
Sbjct: 263 GMRGILIDWLVEVSEEYRLVPDTLYLTVNLIDRFLSENYIEKQKLQLLGVTCMLIASKF- 321
Query: 121 YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSS 180
EEICAP VE+FC ITDNTYS++EV+KME VLNLL FQLA PT K FLRRFIQ AQ S
Sbjct: 322 -EEICAPRVEEFCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASY 380
Query: 181 KVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTN 240
KV +LEF+ANYLAEL LV+Y FL+F PS AAS+V LARWTL+QS HPWNPTLEHYT
Sbjct: 381 KVPSVELEFMANYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQSNHPWNPTLEHYTR 440
Query: 241 YKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
YK SEL+TTV L +LQ+NT C LNA+REKY+ K +++
Sbjct: 441 YKVSELRTTVFALQELQMNTSGCTLNAIREKYRQPKFKSV 480
>emb|CAB46642.1| cyclin A2 [Lycopersicon esculentum]
Length = 475
Score = 295 bits (756), Expect = 8e-79
Identities = 159/280 (56%), Positives = 194/280 (68%), Gaps = 5/280 (1%)
Query: 4 ICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITP 63
+C K S L I DIDSK +D + + YAPDIY N+ E +RRP NYME LQ+DI
Sbjct: 185 VCLKQEGSNSLSIADIDSKHKDPLMCSLYAPDIYNNLQAMELDRRPSFNYMEKLQRDINK 244
Query: 64 GMRGILVDWLVEVADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI--- 120
GMR IL+DWLVEV++E++LVP TL H F + Y K + + I
Sbjct: 245 GMRSILIDWLVEVSEEYRLVP-DTL-YLTVHLIDRFLSEHYIEKQKLQLLGVTCMLIASK 302
Query: 121 YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSS 180
YEEICAP VE+FC ITDNTYS++EV++ME VLN L FQLA PT K FLRRF+Q +Q S
Sbjct: 303 YEEICAPRVEEFCFITDNTYSKEEVVRMESLVLNFLGFQLAAPTTKKFLRRFVQASQASY 362
Query: 181 KVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTN 240
+V +LEF+ANYLAEL L EYSFL+F PS AAS+V LARWTL+QS HPWN TLEHYT
Sbjct: 363 EVPSVELEFMANYLAELTLAEYSFLKFLPSVTAASAVFLARWTLDQSNHPWNSTLEHYTT 422
Query: 241 YKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
YKAS+LKTTVL L DLQ+NT LNA+REKY+ K +++
Sbjct: 423 YKASDLKTTVLLLQDLQMNTSGSTLNAIREKYKQPKFKSV 462
>emb|CAA83277.1| cyclin 3b [Arabidopsis thaliana]
Length = 436
Score = 291 bits (746), Expect = 1e-77
Identities = 152/270 (56%), Positives = 193/270 (71%), Gaps = 5/270 (1%)
Query: 14 LGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWL 73
L +VDIDS + D + YA DIY NIHV E ++RPLANYME +Q+DI P MR IL+DWL
Sbjct: 154 LQVVDIDSNVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWL 213
Query: 74 VEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
VEV+D++KLVP T+ + S + V+ + + YEE+ APGVE
Sbjct: 214 VEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASK--YEELSAPGVE 271
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
+FC IT NTY+R+EVL ME ++LN +HF+L+VPT KTFLRRFI+ AQ S KV +LE+L
Sbjct: 272 EFCFITANTYTRREVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYL 331
Query: 191 ANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTV 250
ANYLAEL LVEYSFL+F PS IAAS+V LARWTL+Q++HPWNPTL+HYT Y+ +ELK TV
Sbjct: 332 ANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTV 391
Query: 251 LELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
L + DLQLNT C L A REKY K +++
Sbjct: 392 LAMEDLQLNTSGCTLAATREKYNQPKFKSV 421
>ref|NP_568248.2| cyclin, putative (CYC3b) [Arabidopsis thaliana]
Length = 436
Score = 291 bits (744), Expect = 2e-77
Identities = 152/270 (56%), Positives = 192/270 (70%), Gaps = 5/270 (1%)
Query: 14 LGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWL 73
L +VDIDS + D + YA DIY NIHV E ++RPLANYME +Q+DI P MR IL+DWL
Sbjct: 154 LQVVDIDSNVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWL 213
Query: 74 VEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
VEV+D++KLVP T+ + S + V+ + + YEE+ APGVE
Sbjct: 214 VEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASK--YEELSAPGVE 271
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
+FC IT NTY+R EVL ME ++LN +HF+L+VPT KTFLRRFI+ AQ S KV +LE+L
Sbjct: 272 EFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYL 331
Query: 191 ANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTV 250
ANYLAEL LVEYSFL+F PS IAAS+V LARWTL+Q++HPWNPTL+HYT Y+ +ELK TV
Sbjct: 332 ANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTV 391
Query: 251 LELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
L + DLQLNT C L A REKY K +++
Sbjct: 392 LAMEDLQLNTSGCTLAATREKYNQPKFKSV 421
>ref|NP_178153.1| cyclin, putative [Arabidopsis thaliana] gi|12324983|gb|AAG52439.1|
putative cyclin; 42214-44381 [Arabidopsis thaliana]
gi|25294188|pir||D96835 probable cyclin, 42214-44381
[imported] - Arabidopsis thaliana
Length = 461
Score = 270 bits (689), Expect = 5e-71
Identities = 144/282 (51%), Positives = 185/282 (65%), Gaps = 35/282 (12%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
VDIDS +D + + YAPDIY N+ V E +RRP ++ME Q+D+T MRGILVDWLVEV
Sbjct: 182 VDIDSDDKDPLLCSLYAPDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEV 241
Query: 77 ADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---------------- 120
++E+ LVP TL Y T + W+ LH +++
Sbjct: 242 SEEYTLVP-DTL---------------YLTVYLIDWF-LHGNYVERQRLQLLGITCMLIA 284
Query: 121 --YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQT 178
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ
Sbjct: 285 SKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFSFQIYTPTSKTFLRRFLRAAQV 344
Query: 179 SSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
S ++EFLANYL EL L++Y FL+F PS IAAS+V LA+WTLNQS HPWNPTLEHY
Sbjct: 345 SFPNQSLEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHY 404
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
T YKAS+LK +V L DLQLNTK C LN++R KY+ K +++
Sbjct: 405 TTYKASDLKASVHALQDLQLNTKGCSLNSIRMKYRQDKFKSV 446
>pir||S53003 mitosis-specific cyclin CYC1 - rape gi|562188|gb|AAA51659.1| cyclin
Length = 434
Score = 267 bits (682), Expect = 3e-70
Identities = 141/281 (50%), Positives = 188/281 (66%), Gaps = 35/281 (12%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVA 77
DIDS +D + YAP+IY N+ V E +RRP+ N+ME +Q+D+T MRGILVDWLVEV+
Sbjct: 158 DIDSDDKDPLLCCLYAPEIYYNLRVSELKRRPVPNFMERIQKDVTQSMRGILVDWLVEVS 217
Query: 78 DEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI----------------- 120
+E+ LVP TL YQT + W+ LH +++
Sbjct: 218 EEYTLVP-DTL---------------YQTVYLIDWF-LHGNYLERQRLQLLGITCMLIAS 260
Query: 121 -YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTS 179
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ S
Sbjct: 261 KYEEINAPRIEEFCFITDNTYTRDQVLEMENQVLAHFSFQIYTPTPKTFLRRFLRAAQAS 320
Query: 180 SKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYT 239
+ + +LE LA+YL E+ L++Y FL+F PS IAAS+V LA+WTL+QS HPWNPTLEHYT
Sbjct: 321 YLIPRRELECLASYLTEVTLIDYHFLKFLPSVIAASAVFLAKWTLDQSNHPWNPTLEHYT 380
Query: 240 NYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
YKAS+LK +V L DLQLNTK C L+A+R KY+ +K +++
Sbjct: 381 TYKASDLKASVHALQDLQLNTKGCPLSAIRMKYKQEKFKSV 421
>emb|CAA83460.1| cyclin 3a [Arabidopsis thaliana]
Length = 443
Score = 265 bits (676), Expect = 2e-69
Identities = 145/271 (53%), Positives = 183/271 (67%), Gaps = 11/271 (4%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
IVDIDS ++D + YA IY +I+V E E+RP +YM LQ+DI P MRGIL+DWLVE
Sbjct: 163 IVDIDSGVQDPQFCSLYAASIYDSINVAELEQRPSTSYMVQLQRDIDPTMRGILIDWLVE 222
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---YEEICAPGV 129
V++E+KLV T+ + F + +Y K + + I YEEI AP +
Sbjct: 223 VSEEYKLVSDTLYLTVNLIDR-----FMSHNYIEKRKLQLLGVTCMLIASKYEEISAPRL 277
Query: 130 EDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEF 189
E+FC ITDNTY+R EVL ME +VLN LHF+L+VPT KTFLRRFI+ AQ S KV ++E+
Sbjct: 278 EEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEY 337
Query: 190 LANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTT 249
LANY AEL L EY+FL+F PS IAAS+V LARWTL+QS HPWN TL+HYT Y+ S LK
Sbjct: 338 LANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHPWNKTLQHYTRYETSALKNA 397
Query: 250 VLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
VL + DLQLNT L A+R KY QK + +
Sbjct: 398 VLAMEDLQLNTSGSTLIAIRTKYNQQKFKRV 428
>gb|AAM20367.1| putative cyclin protein [Arabidopsis thaliana]
gi|18175785|gb|AAL59927.1| putative cyclin [Arabidopsis
thaliana] gi|15218225|ref|NP_173010.1| cyclin, putative
[Arabidopsis thaliana]
Length = 450
Score = 260 bits (665), Expect = 3e-68
Identities = 137/282 (48%), Positives = 185/282 (65%), Gaps = 35/282 (12%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
VDIDS +D + YAP+I+ N+ V E +RRPL ++ME +Q+D+T MRGILVDWLVEV
Sbjct: 173 VDIDSDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEV 232
Query: 77 ADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---------------- 120
++E+ L TL Y T + W+ LH +++
Sbjct: 233 SEEYTLAS-DTL---------------YLTVYLIDWF-LHGNYVQRQQLQLLGITCMLIA 275
Query: 121 --YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQT 178
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ
Sbjct: 276 SKYEEISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQA 335
Query: 179 SSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
S ++EFLA+YL EL L++Y FL+F PS +AAS+V LA+WT++QS HPWNPTLEHY
Sbjct: 336 SRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHY 395
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
T YKAS+LK +V L DLQLNTK C L+A+R KY+ +K +++
Sbjct: 396 TTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSV 437
>gb|AAF71982.1| Putative cyclin [Arabidopsis thaliana] gi|25294181|pir||F86289
probable cyclin [imported] - Arabidopsis thaliana
Length = 452
Score = 259 bits (662), Expect = 6e-68
Identities = 137/278 (49%), Positives = 182/278 (65%), Gaps = 35/278 (12%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
VDIDS +D + YAP+I+ N+ V E +RRPL ++ME +Q+D+T MRGILVDWLVEV
Sbjct: 173 VDIDSDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEV 232
Query: 77 ADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---------------- 120
++E+ L TL Y T + W+ LH +++
Sbjct: 233 SEEYTLAS-DTL---------------YLTVYLIDWF-LHGNYVQRQQLQLLGITCMLIA 275
Query: 121 --YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQT 178
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ
Sbjct: 276 SKYEEISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQA 335
Query: 179 SSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
S ++EFLA+YL EL L++Y FL+F PS +AAS+V LA+WT++QS HPWNPTLEHY
Sbjct: 336 SRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHY 395
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQK 276
T YKAS+LK +V L DLQLNTK C L+A+R KY+ +K
Sbjct: 396 TTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEK 433
>dbj|BAA11560.1| cyclin [Adiantum capillus-veneris]
Length = 532
Score = 254 bits (650), Expect = 2e-66
Identities = 136/265 (51%), Positives = 179/265 (67%), Gaps = 6/265 (2%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
+DID+ +D + ++YA +IY ++ + E +RRP N+M+T+QQDI MRGILVDWLVEV
Sbjct: 251 MDIDNH-KDPQMCSAYAAEIYHHLRMAELKRRPSLNFMDTVQQDINASMRGILVDWLVEV 309
Query: 77 ADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFC 133
A+E+KLVP T+ + S T VA + + YEEICAP V++FC
Sbjct: 310 AEEYKLVPDTLYLTISYIDRFLSGNLVTRQRLQLLGVASMLIASK--YEEICAPQVDEFC 367
Query: 134 VITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANY 193
ITDNTY+R+EVL+ME+ VLN LHF+L PT K+FLRRF++ AQ K LEFL NY
Sbjct: 368 YITDNTYNREEVLEMERSVLNHLHFELTGPTTKSFLRRFVRAAQAGQKSPTLQLEFLGNY 427
Query: 194 LAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLEL 253
LAEL L+EY FL F PS IA ++VL+AR TLN + PWN TL+HY+ YKASELK +
Sbjct: 428 LAELTLLEYGFLHFLPSMIAGAAVLVARVTLNPTWRPWNSTLQHYSGYKASELKECAKAI 487
Query: 254 IDLQLNTKRCRLNAVREKYQHQKVR 278
++LQ NTK C L A+REKY+ K +
Sbjct: 488 LELQKNTKNCTLPAIREKYRQHKFK 512
>dbj|BAC56853.1| cyclin A1 [Silene latifolia]
Length = 487
Score = 223 bits (569), Expect = 4e-57
Identities = 126/268 (47%), Positives = 169/268 (63%), Gaps = 6/268 (2%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
+VD+D D ++ A DIY ++ E ++RP ++ME Q+DI MR ILVDWLVE
Sbjct: 204 VVDVDDNHMDPQFCSTIACDIYKHLRESETQKRPSTDFMEQTQKDINASMRAILVDWLVE 263
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
VA+E++LVP T+ + + S VA + A YEEICAP VE+F
Sbjct: 264 VAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQRLQLLGVACMMIAAK--YEEICAPQVEEF 321
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNTY ++EVL+ME VLN L F++ PT K FLRRF++ AQ ++V LE LAN
Sbjct: 322 CYITDNTYFKEEVLQMESGVLNFLKFEMTAPTTKNFLRRFVRAAQVMNEVPAFQLECLAN 381
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
Y+AEL+L+EYS L++ PS IAASSV LA++ L S PWN TL HYT Y+AS+L+ V
Sbjct: 382 YVAELSLLEYSMLKYAPSLIAASSVFLAKYMLT-SSRPWNATLRHYTLYEASDLEECVKA 440
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVRNL 280
L L LN+ L A+REKY H K +++
Sbjct: 441 LHQLCLNSHISSLPAIREKYSHHKYKSV 468
>pir||C57742 cyclin II - maize gi|516550|gb|AAA20237.1| cyclin IIZm
Length = 456
Score = 220 bits (560), Expect = 4e-56
Identities = 123/267 (46%), Positives = 163/267 (60%), Gaps = 7/267 (2%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
I D+DS+ D + + A DIY ++ E ++RP ++ME +Q+D+ P MR IL+DWLVE
Sbjct: 169 ICDVDSEYEDPQLCATLASDIYMHLREAETKKRPSTDFMEMIQKDVNPSMRAILIDWLVE 228
Query: 76 VADEFKLVPRHTLPCCESH*SIPFPTFDYQTK----AAVAWYYLHADFIYEEICAPGVED 131
VA+E++LVP TL ++ + + K VA + A YEEICAP VE+
Sbjct: 229 VAEEYRLVP-DTLYLTVNYIDRYLSGNEIRRKRLQLLGVACMLIAAK--YEEICAPQVEE 285
Query: 132 FCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLA 191
FC ITDNTY R EVL ME VLN L F++ PT K FLRRF + AQ + LEFLA
Sbjct: 286 FCYITDNTYFRDEVLDMEASVLNYLKFEMTAPTAKCFLRRFARAAQACDEDPALHLEFLA 345
Query: 192 NYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVL 251
NY+AEL+L+EYS L + PS IAAS++ LAR+ L +++PWN TL HYT YK S+L V
Sbjct: 346 NYIAELSLLEYSLLSYPPSLIAASAIFLARFILQPTKYPWNSTLAHYTQYKPSKLSECVK 405
Query: 252 ELIDLQLNTKRCRLNAVREKYQHQKVR 278
L L L A+REKY K +
Sbjct: 406 ALHRLCSVGSGSNLPAIREKYSQHKYK 432
>emb|CAB46641.1| cyclin A1 [Lycopersicon esculentum]
Length = 490
Score = 218 bits (556), Expect = 1e-55
Identities = 119/266 (44%), Positives = 166/266 (61%), Gaps = 5/266 (1%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
I++ID+ L D + + A DIY ++ E ++RP ++M +Q+DI P MR IL+DWLVE
Sbjct: 206 IMNIDNNLVDPQLCATMACDIYKHLRASEAKKRPSTDFMAKVQKDINPSMRAILIDWLVE 265
Query: 76 VADEFKLVP---RHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
VA+E++LVP T+ + + + D Q + + YEEICAP VE+F
Sbjct: 266 VAEEYRLVPDTLHLTINYIDRY--LSGNLMDRQRLQLLGVACMMIASKYEEICAPQVEEF 323
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNTY ++EVL+ME VLN L F++ PT K FLRRF++ AQ ++V LE LA+
Sbjct: 324 CYITDNTYFKEEVLQMESAVLNYLKFEMTAPTAKCFLRRFVRAAQGLNEVLSLQLEHLAS 383
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
Y+AEL+L+EY+ L + PS IAAS++ LA++ L S PWN TL HYT Y+ S+L+ VL
Sbjct: 384 YIAELSLLEYNMLCYAPSLIAASAIFLAKYILLPSVKPWNSTLRHYTLYQPSDLRDCVLA 443
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVR 278
L L N L AVREKY K +
Sbjct: 444 LHSLCCNNNNSSLPAVREKYSQHKYK 469
>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum] gi|7438513|pir||T02968
cyclin A-type (clone 59) - common tobacco
Length = 384
Score = 218 bits (554), Expect = 2e-55
Identities = 120/270 (44%), Positives = 177/270 (65%), Gaps = 7/270 (2%)
Query: 14 LGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECE--RRPLANYMETLQQDITPGMRGILVD 71
L + ++D+ D + ++Y DIY + E E RRPL +Y+E +Q+D++P MRG+LVD
Sbjct: 95 LNVDNVDANYDDPQMCSAYVSDIYDYLRKMEIEEKRRPLPDYLEKVQKDLSPNMRGVLVD 154
Query: 72 WLVEVADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---YEEICAPG 128
WLVEVA+E+KL+ TL S+ F + + T+ + + + I YEEI P
Sbjct: 155 WLVEVAEEYKLLS-DTLYLAVSYID-RFLSTNVITRQKLQLLGVSSMLISAKYEEISPPH 212
Query: 129 VEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLE 188
VEDFC ITDNTY+++EV+KME +VL L+F++ PT+KTFLRRF VAQ K LE
Sbjct: 213 VEDFCYITDNTYTKEEVVKMEADVLKTLNFEMGNPTVKTFLRRFTGVAQEDYKTPNLQLE 272
Query: 189 FLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKT 248
FL YLAEL++++YS +++ PS +AA+ V L+R+TL + HPW+ L+ Y+ YKA++LK
Sbjct: 273 FLGYYLAELSILDYSCVKYVPSLLAAAVVFLSRFTLQPNTHPWSLALQQYSGYKAADLKE 332
Query: 249 TVLELIDLQLNTKRCRLNAVREKYQHQKVR 278
+L L DLQL+ + L AVR+KY+ K +
Sbjct: 333 CILILHDLQLSRRGGSLAAVRDKYKQHKFK 362
>ref|NP_175077.1| cyclin, putative [Arabidopsis thaliana] gi|12320826|gb|AAG50557.1|
mitotic cyclin a2-type, putative [Arabidopsis thaliana]
gi|51968954|dbj|BAD43169.1| putative mitotic cyclin
a2-type [Arabidopsis thaliana] gi|25294183|pir||D96505
probable mitotic cyclin a2-type [imported] - Arabidopsis
thaliana
Length = 460
Score = 216 bits (551), Expect = 5e-55
Identities = 118/266 (44%), Positives = 164/266 (61%), Gaps = 5/266 (1%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
IV+IDS D + ++A DIY ++ E ++RP +YME +Q+D+ MRGILVDWL+E
Sbjct: 178 IVNIDSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIE 237
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
V++E++LVP T+ + + S + VA + A YEEICAP VE+F
Sbjct: 238 VSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAK--YEEICAPQVEEF 295
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNTY + EVL ME +VLN L F++ PT K FLRRF++ A + LE +AN
Sbjct: 296 CYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMAN 355
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
Y+AEL+L+EY+ L PS +AAS++ LA++ L+ + PWN TL+HYT YKA EL+ V +
Sbjct: 356 YIAELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMELRGCVKD 415
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVR 278
L L L AVREKY K +
Sbjct: 416 LQRLCSTAHGSTLPAVREKYSQHKYK 441
>gb|AAM61486.1| Cyclin, putative [Arabidopsis thaliana] gi|21360411|gb|AAM47321.1|
At1g47210/F8G22_8 [Arabidopsis thaliana]
gi|18086355|gb|AAL57640.1| At1g47210/F8G22_8
[Arabidopsis thaliana] gi|30694019|ref|NP_564499.3|
cyclin family protein [Arabidopsis thaliana]
gi|12325397|gb|AAG52639.1| cyclin, putative; 29287-27739
[Arabidopsis thaliana] gi|25294184|pir||G96512 probable
cyclin, 29287-27739 [imported] - Arabidopsis thaliana
Length = 372
Score = 215 bits (548), Expect = 1e-54
Identities = 121/263 (46%), Positives = 166/263 (63%), Gaps = 5/263 (1%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECE--RRPLANYMETLQQDITPGMRGILVDWLVE 75
DIDS+ D + Y DIY + E + +RPL +Y+E +Q+D+TP MRG+LVDWLVE
Sbjct: 88 DIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVE 147
Query: 76 VADEFKLVPRHTLPCCESH*S--IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFC 133
VA+E+KL TL SH + T + Q V + YEEI P V+DFC
Sbjct: 148 VAEEYKL-GSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFC 206
Query: 134 VITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANY 193
ITDNT+S+Q+V+KME ++L L F+L PTI TF+RRF +VAQ KV LE L Y
Sbjct: 207 YITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCY 266
Query: 194 LAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLEL 253
L+EL++++Y ++F PS +AAS+V LAR+ + +HPWN LE YT YKA++L+ V +
Sbjct: 267 LSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGII 326
Query: 254 IDLQLNTKRCRLNAVREKYQHQK 276
DL L+ + L AVREKY+H K
Sbjct: 327 HDLYLSRRGGALQAVREKYKHHK 349
>dbj|BAB08272.1| cyclin A-type [Arabidopsis thaliana] gi|15239172|ref|NP_199122.1|
cyclin, putative [Arabidopsis thaliana]
Length = 355
Score = 213 bits (543), Expect = 4e-54
Identities = 113/263 (42%), Positives = 165/263 (61%), Gaps = 3/263 (1%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVA 77
DID++ D + Y I+ + E + RPL +Y+E +Q+D+T MRG+LVDWLVEVA
Sbjct: 73 DIDTRSDDPQMCGPYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVA 132
Query: 78 DEFKLVPRHTLPCCESH*S--IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFCVI 135
+E+KL+ TL S+ + T + Q + + YEEI P V+DFC I
Sbjct: 133 EEYKLLS-DTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYI 191
Query: 136 TDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLA 195
TDNTY++QE++KME ++L L F+L PT TFLRRF +VAQ +++ +EFL +YL+
Sbjct: 192 TDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLS 251
Query: 196 ELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELID 255
EL++++Y ++F PS +AAS+V LAR+ + +HPWN LE YT YKA +LK V + D
Sbjct: 252 ELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHD 311
Query: 256 LQLNTKRCRLNAVREKYQHQKVR 278
L L+ K L A+REKY+ K +
Sbjct: 312 LYLSRKCGALEAIREKYKQHKFK 334
>pir||S53004 mitosis-specific cyclin CYC2 - rape gi|562190|gb|AAA51660.1| cyclin
Length = 425
Score = 207 bits (526), Expect = 4e-52
Identities = 113/266 (42%), Positives = 165/266 (61%), Gaps = 6/266 (2%)
Query: 17 VDIDSKLRDSP-IWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
++ID+K P ++ ++A DIY ++ E +++P +YMET+Q+D+ MRGILVDWLVE
Sbjct: 141 MNIDNKDDADPQLYATFACDIYNHLRAAEAKKQPAVDYMETVQKDVNSTMRGILVDWLVE 200
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
V++E++LVP T+ + + S + VA + A YEE+CAP VE+F
Sbjct: 201 VSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAK--YEEVCAPQVEEF 258
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNTY + EVL ME VLN L F+++ PT+K FLRR + LE +A+
Sbjct: 259 CYITDNTYLKDEVLDMESAVLNYLKFEMSAPTVKCFLRRLFSGCPRVHEAPCMQLECMAS 318
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
Y+AEL+L+EY+ L PS +AAS++ LA++TL+ + PWN TL HYT Y+A EL+ V++
Sbjct: 319 YIAELSLLEYTMLSHPPSLVAASAIFLAKYTLDPTRRPWNSTLRHYTQYEAMELRGCVMD 378
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVR 278
L L N L AVR+KY K +
Sbjct: 379 LQRLCSNAHVSTLPAVRDKYSQHKYK 404
>gb|AAT73638.1| 'unknown protein, contains cyclins regulate cyclin dependent
kinases (CDKs), PF00134' [Oryza sativa (japonica
cultivar-group)]
Length = 441
Score = 203 bits (517), Expect = 4e-51
Identities = 117/264 (44%), Positives = 158/264 (59%), Gaps = 24/264 (9%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRE-CERRPLANYMETLQQDITPGMRGILVDWLV 74
IVDID+ D + + A DIY ++ V E ++RP +++ET+Q++I MR +L+DWLV
Sbjct: 127 IVDIDNNHEDPQLCATLAFDIYKHLRVAEQTKKRPSTDFVETIQKNIDTSMRAVLIDWLV 186
Query: 75 EVADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFCV 134
EV +E++LVP TL + T +Y D YEEIC P VE+ C
Sbjct: 187 EVTEEYRLVP-ETL----------YLTVNY------------IDRKYEEICPPQVEELCY 223
Query: 135 ITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYL 194
I+DNTY++ EVLKME VL L F++ PT K FLRRF++ AQ + LEFLANY+
Sbjct: 224 ISDNTYTKDEVLKMEASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYI 283
Query: 195 AELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELI 254
AEL+L+EYS + + PS IAASS+ LA++ L +E+PWN TL YT YK S+L L
Sbjct: 284 AELSLLEYSLICYVPSLIAASSIFLAKFILKPTENPWNSTLSFYTQYKPSDLCNCAKGLH 343
Query: 255 DLQLNTKRCRLNAVREKYQHQKVR 278
L L L AVREKY K +
Sbjct: 344 RLFLVGPGGNLRAVREKYSQHKAQ 367
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,766,359
Number of Sequences: 2540612
Number of extensions: 17262402
Number of successful extensions: 48020
Number of sequences better than 10.0: 731
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 46100
Number of HSP's gapped (non-prelim): 1085
length of query: 293
length of database: 863,360,394
effective HSP length: 127
effective length of query: 166
effective length of database: 540,702,670
effective search space: 89756643220
effective search space used: 89756643220
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 74 (33.1 bits)
Medicago: description of AC146722.7