BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146722.13 + phase: 0
(142 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM91737.1| unknown protein [Arabidopsis thaliana] gi|1502832... 175 2e-43
ref|XP_475884.1| unknown protein [Oryza sativa (japonica cultiva... 153 7e-37
ref|NP_974664.1| ferredoxin-related [Arabidopsis thaliana] 152 2e-36
ref|NP_974663.1| ferredoxin-related [Arabidopsis thaliana] 123 1e-27
ref|XP_478158.1| 2Fe-2S iron-sulfur cluster protein-like [Oryza ... 102 1e-21
gb|AAP13368.1| At3g16240 [Arabidopsis thaliana] gi|9279708|dbj|B... 91 6e-18
emb|CAB79976.1| hypothetical protein [Arabidopsis thaliana] gi|3... 81 5e-15
ref|ZP_00328912.1| COG0633: Ferredoxin [Trichodesmium erythraeum... 60 9e-09
dbj|BAB72841.1| asl0884 [Nostoc sp. PCC 7120] gi|17228379|ref|NP... 58 6e-08
ref|ZP_00345942.1| COG0633: Ferredoxin [Nostoc punctiforme PCC 7... 58 6e-08
gb|AAL05047.1| putative [2Fe-2S] ferredoxin [Anabaena variabilis] 57 7e-08
ref|ZP_00162503.2| COG0633: Ferredoxin [Anabaena variabilis ATCC... 57 7e-08
ref|ZP_00518686.1| Ferredoxin [Crocosphaera watsonii WH 8501] gi... 57 1e-07
ref|NP_441697.1| hydrogenase component [Synechocystis sp. PCC 68... 56 2e-07
ref|YP_171542.1| probable ferredoxin [Synechococcus elongatus PC... 56 2e-07
ref|NP_682319.1| putative ferredoxin [Thermosynechococcus elonga... 55 3e-07
ref|NP_925944.1| probable ferredoxin [Gloeobacter violaceus PCC ... 55 5e-07
emb|CAE21839.1| Ferredoxin [Prochlorococcus marinus str. MIT 931... 49 3e-05
ref|NP_892435.1| possible ferredoxin [Prochlorococcus marinus su... 48 4e-05
gb|AAP99402.1| Ferredoxin [Prochlorococcus marinus subsp. marinu... 44 6e-04
>gb|AAM91737.1| unknown protein [Arabidopsis thaliana] gi|15028325|gb|AAK76639.1|
unknown protein [Arabidopsis thaliana]
gi|18418042|ref|NP_567899.1| ferredoxin-related
[Arabidopsis thaliana]
Length = 173
Score = 175 bits (443), Expect = 2e-43
Identities = 89/130 (68%), Positives = 97/130 (74%), Gaps = 23/130 (17%)
Query: 36 ANSPESPSP--PPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYG 93
A+SP+ S P EIELEF GPKP DGS+PVDK KA+SG+KL+RSIM DNKI+LYA YG
Sbjct: 44 ASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYG 103
Query: 94 KLMNCGGGGSCGTCIVE---------------------KPESWRLACQTIVGNKENSGKV 132
K+MNCGGGGSCGTCIVE KPESWRLACQTIVGNKENSGKV
Sbjct: 104 KVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGKV 163
Query: 133 VVQRIPQWKK 142
VVQRIPQWKK
Sbjct: 164 VVQRIPQWKK 173
>ref|XP_475884.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|49328038|gb|AAT58739.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 210
Score = 153 bits (387), Expect = 7e-37
Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 22/136 (16%)
Query: 29 PNSVCLVANSPESPSPP-PEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKID 87
PN+ A++ E+ PP P+I+LEFVGPK + DGSFPVD+ A SGEKL+R +M +NKI+
Sbjct: 50 PNASAGAASAEEAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIE 109
Query: 88 LYATYGKLMNCGGGGSCGTCIVE---------------------KPESWRLACQTIVGNK 126
LYA YGK+MNCGGGGSCGTCIVE KPESWRLACQTIVGNK
Sbjct: 110 LYAAYGKVMNCGGGGSCGTCIVEIVDGKELLNERTNTENRYLKKKPESWRLACQTIVGNK 169
Query: 127 ENSGKVVVQRIPQWKK 142
ENSGK IPQ ++
Sbjct: 170 ENSGKYKTTSIPQERR 185
>ref|NP_974664.1| ferredoxin-related [Arabidopsis thaliana]
Length = 180
Score = 152 bits (384), Expect = 2e-36
Identities = 78/119 (65%), Positives = 86/119 (71%), Gaps = 23/119 (19%)
Query: 36 ANSPESPSP--PPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYG 93
A+SP+ S P EIELEF GPKP DGS+PVDK KA+SG+KL+RSIM DNKI+LYA YG
Sbjct: 44 ASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYG 103
Query: 94 KLMNCGGGGSCGTCIVE---------------------KPESWRLACQTIVGNKENSGK 131
K+MNCGGGGSCGTCIVE KPESWRLACQTIVGNKENSGK
Sbjct: 104 KVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGK 162
>ref|NP_974663.1| ferredoxin-related [Arabidopsis thaliana]
Length = 130
Score = 123 bits (308), Expect = 1e-27
Identities = 58/83 (69%), Positives = 67/83 (79%), Gaps = 2/83 (2%)
Query: 36 ANSPESPSP--PPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYG 93
A+SP+ S P EIELEF GPKP DGS+PVDK KA+SG+KL+RSIM DNKI+LYA YG
Sbjct: 44 ASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYG 103
Query: 94 KLMNCGGGGSCGTCIVEKPESWR 116
K+MNCGGGGSCGTCIVE W+
Sbjct: 104 KVMNCGGGGSCGTCIVEANTRWQ 126
>ref|XP_478158.1| 2Fe-2S iron-sulfur cluster protein-like [Oryza sativa (japonica
cultivar-group)] gi|33146986|dbj|BAC80058.1| 2Fe-2S
iron-sulfur cluster protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 210
Score = 102 bits (255), Expect = 1e-21
Identities = 54/123 (43%), Positives = 72/123 (57%), Gaps = 23/123 (18%)
Query: 41 SPSPPPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYGKLM-NCG 99
+P PP ++ FV P+ DG+ V A G+KL R IM DN IDLY Y KL+ NC
Sbjct: 83 APEEPPSVDFAFVAPRLLPDGTPDVHYRTACGGQKL-RDIMLDNYIDLYGPYDKLLLNCE 141
Query: 100 GGGSCGTCIVE---------------------KPESWRLACQTIVGNKENSGKVVVQRIP 138
GGG CGTCIVE KP++WRLACQ VGN +++G++V+Q++P
Sbjct: 142 GGGECGTCIVEVVEGGELLSPKTDVEKELLKRKPKTWRLACQATVGNPDSTGQMVIQQLP 201
Query: 139 QWK 141
+WK
Sbjct: 202 EWK 204
>gb|AAP13368.1| At3g16240 [Arabidopsis thaliana] gi|9279708|dbj|BAB01265.1| unnamed
protein product [Arabidopsis thaliana]
gi|14596159|gb|AAK68807.1| Unknown protein [Arabidopsis
thaliana] gi|15228165|ref|NP_188246.1|
ferredoxin-related [Arabidopsis thaliana]
Length = 204
Score = 90.9 bits (224), Expect = 6e-18
Identities = 58/156 (37%), Positives = 81/156 (51%), Gaps = 35/156 (22%)
Query: 20 PTIYFPRRRPNS-----VCLVANSPES-------PSPPPEIELEFVGPKPEGDGSFPVDK 67
P YF R + N+ V ++ +P S P PP ++ FV DG+ V
Sbjct: 30 PNSYFFRSKHNAARTKTVRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHW 89
Query: 68 VKAISGEKLMRSIMSDNKIDLYATYGK-LMNCGGGGSCGTCIVE---------------- 110
+A G+KL R IM D+ I+LY Y K L NC G G+C TC+VE
Sbjct: 90 RRANGGQKL-RDIMLDSNIELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEK 148
Query: 111 -----KPESWRLACQTIVGNKENSGKVVVQRIPQWK 141
KP++WRLACQT VGN +++G VV+Q++P+WK
Sbjct: 149 EKLKRKPKNWRLACQTNVGNPDSTGLVVIQQLPEWK 184
>emb|CAB79976.1| hypothetical protein [Arabidopsis thaliana]
gi|3063711|emb|CAA18602.1| hypothetical protein
[Arabidopsis thaliana] gi|7486413|pir||T04467
hypothetical protein F4D11.210 - Arabidopsis thaliana
Length = 163
Score = 81.3 bits (199), Expect = 5e-15
Identities = 40/59 (67%), Positives = 47/59 (78%), Gaps = 2/59 (3%)
Query: 36 ANSPESPSP--PPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSDNKIDLYATY 92
A+SP+ S P EIELEF GPKP DGS+PVDK KA+SG+KL+RSIM DNKI+LYA Y
Sbjct: 44 ASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAY 102
>ref|ZP_00328912.1| COG0633: Ferredoxin [Trichodesmium erythraeum IMS101]
Length = 102
Score = 60.5 bits (145), Expect = 9e-09
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 26/80 (32%)
Query: 83 DNKIDLYATYGKLMNCGGGGSCGTCIVE---------------------KPESWRLACQT 121
+N++D+Y KLMNCGG G CGTC+VE +PE+WRLACQ
Sbjct: 28 ENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKLKKRPENWRLACQV 87
Query: 122 IVGNKENSGKVVVQRIPQWK 141
+V +G VVV+ P+ K
Sbjct: 88 LV-----NGPVVVKTKPKRK 102
>dbj|BAB72841.1| asl0884 [Nostoc sp. PCC 7120] gi|17228379|ref|NP_484927.1|
hypothetical protein asl0884 [Nostoc sp. PCC 7120]
gi|25282668|pir||AI1916 hypothetical protein asl0884
[imported] - Nostoc sp. (strain PCC 7120)
Length = 98
Score = 57.8 bits (138), Expect = 6e-08
Identities = 33/78 (42%), Positives = 40/78 (50%), Gaps = 22/78 (28%)
Query: 67 KVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------- 110
+V A G L M DN +D+Y +GKL NCGG G CGTCIVE
Sbjct: 12 EVIAADGANLRLKAM-DNGVDIYKLFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVEN 70
Query: 111 -----KPESWRLACQTIV 123
KP ++RLACQT+V
Sbjct: 71 RMLKKKPANYRLACQTLV 88
>ref|ZP_00345942.1| COG0633: Ferredoxin [Nostoc punctiforme PCC 73102]
Length = 98
Score = 57.8 bits (138), Expect = 6e-08
Identities = 33/78 (42%), Positives = 39/78 (49%), Gaps = 22/78 (28%)
Query: 67 KVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------- 110
+V A G L M N ID+Y GK+ NCGG G CGTCIVE
Sbjct: 12 EVVAADGANLRLKAMQ-NDIDIYTFIGKMTNCGGNGQCGTCIVEIVEGLENLSPRTDVEN 70
Query: 111 -----KPESWRLACQTIV 123
KPE++RLACQT+V
Sbjct: 71 RKFKKKPENYRLACQTLV 88
>gb|AAL05047.1| putative [2Fe-2S] ferredoxin [Anabaena variabilis]
Length = 99
Score = 57.4 bits (137), Expect = 7e-08
Identities = 33/78 (42%), Positives = 40/78 (50%), Gaps = 22/78 (28%)
Query: 67 KVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------- 110
+V A G L M DN +D+Y +GKL NCGG G CGTCIVE
Sbjct: 12 EVIAADGANLRLKAM-DNGVDIYKFFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVEN 70
Query: 111 -----KPESWRLACQTIV 123
KP ++RLACQT+V
Sbjct: 71 RMLKKKPANYRLACQTLV 88
>ref|ZP_00162503.2| COG0633: Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 98
Score = 57.4 bits (137), Expect = 7e-08
Identities = 33/78 (42%), Positives = 40/78 (50%), Gaps = 22/78 (28%)
Query: 67 KVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------- 110
+V A G L M DN +D+Y +GKL NCGG G CGTCIVE
Sbjct: 12 EVIAADGANLRLKAM-DNGVDIYKFFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVEN 70
Query: 111 -----KPESWRLACQTIV 123
KP ++RLACQT+V
Sbjct: 71 RMLKKKPANYRLACQTLV 88
>ref|ZP_00518686.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|67852829|gb|EAM48232.1| Ferredoxin [Crocosphaera
watsonii WH 8501]
Length = 110
Score = 56.6 bits (135), Expect = 1e-07
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 21/68 (30%)
Query: 77 MRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------------KPESW 115
+R NK+D+Y GKLMNCGG G CGTC+VE KP++
Sbjct: 32 LREKALQNKVDIYTFKGKLMNCGGYGQCGTCLVEIVEGMGNVSPRTDFEQRVLKKKPDNH 91
Query: 116 RLACQTIV 123
RLACQT+V
Sbjct: 92 RLACQTLV 99
>ref|NP_441697.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|1653463|dbj|BAA18377.1| hydrogenase component
[Synechocystis sp. PCC 6803] gi|7430749|pir||S75918
probable ferredoxin [2Fe-2S] - Synechocystis sp. (strain
PCC 6803)
Length = 99
Score = 56.2 bits (134), Expect = 2e-07
Identities = 29/68 (42%), Positives = 36/68 (52%), Gaps = 21/68 (30%)
Query: 77 MRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------------KPESW 115
+R N +D+Y GKLMNCGG G CGTCIVE KP+++
Sbjct: 20 LREKALQNGVDIYTLKGKLMNCGGYGQCGTCIVEITAGMENLSPKTDFENRVLRKKPDNF 79
Query: 116 RLACQTIV 123
RLACQT+V
Sbjct: 80 RLACQTLV 87
>ref|YP_171542.1| probable ferredoxin [Synechococcus elongatus PCC 6301]
gi|56685800|dbj|BAD79022.1| probable ferredoxin
[Synechococcus elongatus PCC 6301]
gi|45511679|ref|ZP_00163246.1| COG0633: Ferredoxin
[Synechococcus elongatus PCC 7942]
Length = 144
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/81 (40%), Positives = 41/81 (49%), Gaps = 26/81 (32%)
Query: 83 DNKIDLYATYGKLMNCGGGGSCGTCIVE---------------------KPESWRLACQT 121
+N++DLY GK+MNCGG G CGTCIVE KP+S+RLACQ
Sbjct: 27 ENQVDLYTFGGKMMNCGGYGQCGTCIVEIVQGAENLSPRTSFEERKLKRKPDSYRLACQA 86
Query: 122 IVGNKENSGKVVVQRIPQWKK 142
V +G V V P K+
Sbjct: 87 TV-----NGPVTVLTKPNPKE 102
>ref|NP_682319.1| putative ferredoxin [Thermosynechococcus elongatus BP-1]
gi|22295254|dbj|BAC09081.1| tll1529 [Thermosynechococcus
elongatus BP-1]
Length = 108
Score = 55.5 bits (132), Expect = 3e-07
Identities = 32/78 (41%), Positives = 39/78 (49%), Gaps = 22/78 (28%)
Query: 67 KVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------- 110
++ A +G L M +DLY GKL NCGG G CGTCIVE
Sbjct: 20 EIVAANGANLRLKAMEAG-VDLYTLKGKLFNCGGYGQCGTCIVEIVEGMEHLSPRTPVEE 78
Query: 111 -----KPESWRLACQTIV 123
KPE++RLACQT+V
Sbjct: 79 RKLRRKPENYRLACQTLV 96
>ref|NP_925944.1| probable ferredoxin [Gloeobacter violaceus PCC 7421]
gi|35213568|dbj|BAC90939.1| gsl2998 [Gloeobacter
violaceus PCC 7421]
Length = 98
Score = 54.7 bits (130), Expect = 5e-07
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 21/72 (29%)
Query: 76 LMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE---------------------KPES 114
++R M + +IDLY K++NCGG G CGTCIV+ KP +
Sbjct: 20 ILRDAMLEKRIDLYKGMAKVLNCGGVGQCGTCIVDILSGIEHCSERTPVEDQKLRKKPAT 79
Query: 115 WRLACQTIVGNK 126
+RLACQT+V +
Sbjct: 80 YRLACQTLVNGE 91
>emb|CAE21839.1| Ferredoxin [Prochlorococcus marinus str. MIT 9313]
gi|33863931|ref|NP_895491.1| Ferredoxin [Prochlorococcus
marinus str. MIT 9313]
Length = 129
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/79 (37%), Positives = 36/79 (44%), Gaps = 24/79 (30%)
Query: 68 VKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIV------------------ 109
V+ GE L R + ++LY GKL NCGG G C TC V
Sbjct: 22 VECKQGENL-REVALREGMELYGLKGKLGNCGGCGQCITCFVGIEGESKVGALSPRTEVE 80
Query: 110 -----EKPESWRLACQTIV 123
+PE+WRLACQTIV
Sbjct: 81 EIKLKRRPENWRLACQTIV 99
>ref|NP_892435.1| possible ferredoxin [Prochlorococcus marinus subsp. pastoris str.
CCMP1986] gi|33633816|emb|CAE18775.1| possible
ferredoxin [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 120
Score = 48.1 bits (113), Expect = 4e-05
Identities = 29/86 (33%), Positives = 40/86 (45%), Gaps = 27/86 (31%)
Query: 73 GEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIV----------------------E 110
GE L R ++ K+ LY G L NCGG G C TC V
Sbjct: 18 GENL-RELVIREKLQLYGLKGILGNCGGVGQCSTCFVSVEGGAKNSLSPLTSVEEEKLNN 76
Query: 111 KPESWRLACQTIVGNKENSGKVVVQR 136
+P++WRLACQT++ NS V++ +
Sbjct: 77 RPDNWRLACQTLI----NSSAVILTK 98
>gb|AAP99402.1| Ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33239808|ref|NP_874750.1| Ferredoxin [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 130
Score = 44.3 bits (103), Expect = 6e-04
Identities = 28/78 (35%), Positives = 34/78 (42%), Gaps = 23/78 (29%)
Query: 68 VKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSCGTCIVE----------------- 110
VK GE L R + ++LY GKL NCGG G C TC V
Sbjct: 23 VKCQFGENL-REVALREGLELYGFKGKLGNCGGYGQCITCYVSVAEGQQDSLSPITDIEQ 81
Query: 111 -----KPESWRLACQTIV 123
+P +WRLACQ +V
Sbjct: 82 TKLRGRPGNWRLACQAVV 99
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,772,323
Number of Sequences: 2540612
Number of extensions: 13710670
Number of successful extensions: 39014
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 38891
Number of HSP's gapped (non-prelim): 145
length of query: 142
length of database: 863,360,394
effective HSP length: 118
effective length of query: 24
effective length of database: 563,568,178
effective search space: 13525636272
effective search space used: 13525636272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146722.13