BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146719.10 + phase: 0 /pseudo
(112 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK64119.1| putative 26S proteasome regulatory subunit S2 [Ar... 152 2e-36
dbj|BAD94334.1| putative 26S proteasome regulatory subunit S2 [A... 152 2e-36
pir||A84591 26S proteasome regulatory subunit S2 [imported] - Ar... 152 2e-36
gb|AAP86656.1| 26S proteasome subunit RPN1b [Arabidopsis thaliana] 151 3e-36
dbj|BAD54002.1| putative 26S proteasome regulatory subunit S2 [O... 145 3e-34
dbj|BAB78497.1| 26S proteasome regulatory particle non-ATPase su... 145 3e-34
ref|XP_464147.1| putative 26S proteasome regulatory subunit S2 [... 144 5e-34
ref|XP_450542.1| putative proteasome 26S non-ATPase subunit 2 [O... 141 3e-33
dbj|BAB78496.1| 26S proteasome regulatory particle non-ATPase su... 139 2e-32
emb|CAB79649.1| putative protein [Arabidopsis thaliana] gi|28424... 130 6e-30
gb|AAH90101.1| MGC97650 protein [Xenopus tropicalis] gi|62751452... 125 3e-28
gb|AAH68957.1| MGC83233 protein [Xenopus laevis] 125 3e-28
emb|CAG06387.1| unnamed protein product [Tetraodon nigroviridis] 125 3e-28
gb|AAH68911.1| Unknown (protein for MGC:83116) [Xenopus laevis] 125 3e-28
gb|AAH02368.1| Proteasome 26S non-ATPase subunit 2 [Homo sapiens... 123 9e-28
ref|NP_598862.1| proteasome 26S non-ATPase subunit 2 [Mus muscul... 123 9e-28
gb|AAH23049.1| Psmd2 protein [Mus musculus] 123 9e-28
gb|AAP88738.1| proteasome (prosome, macropain) 26S subunit, non-... 123 9e-28
gb|AAP88737.1| proteasome (prosome, macropain) 26S subunit, non-... 123 9e-28
ref|XP_213571.2| PREDICTED: similar to Proteasome 26S non-ATPase... 123 9e-28
>gb|AAK64119.1| putative 26S proteasome regulatory subunit S2 [Arabidopsis
thaliana] gi|13430608|gb|AAK25926.1| putative 26S
proteasome regulatory subunit S2 [Arabidopsis thaliana]
gi|20198043|gb|AAD21708.2| 26S proteasome regulatory
subunit S2 (RPN1) [Arabidopsis thaliana]
gi|32700010|gb|AAP86655.1| 26S proteasome subunit RPN1a
[Arabidopsis thaliana] gi|18399399|ref|NP_565477.1| 26S
proteasome regulatory subunit S2 (RPN1) [Arabidopsis
thaliana]
Length = 891
Score = 152 bits (383), Expect = 2e-36
Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ + GKYHYVLYFLVLAMQ P M+LTV ENLKPL VP+RVGQAVDV
Sbjct: 786 LDMKPIILGKYHYVLYFLVLAMQ-----------PRMMLTVDENLKPLSVPVRVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELAT+KYIP+SP+LE F+ILKE
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKE 884
>dbj|BAD94334.1| putative 26S proteasome regulatory subunit S2 [Arabidopsis
thaliana]
Length = 240
Score = 152 bits (383), Expect = 2e-36
Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ + GKYHYVLYFLVLAMQ P M+LTV ENLKPL VP+RVGQAVDV
Sbjct: 135 LDMKPIILGKYHYVLYFLVLAMQ-----------PRMMLTVDENLKPLSVPVRVGQAVDV 183
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELAT+KYIP+SP+LE F+ILKE
Sbjct: 184 VGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKE 233
>pir||A84591 26S proteasome regulatory subunit S2 [imported] - Arabidopsis
thaliana
Length = 893
Score = 152 bits (383), Expect = 2e-36
Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ + GKYHYVLYFLVLAMQ P M+LTV ENLKPL VP+RVGQAVDV
Sbjct: 788 LDMKPIILGKYHYVLYFLVLAMQ-----------PRMMLTVDENLKPLSVPVRVGQAVDV 836
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELAT+KYIP+SP+LE F+ILKE
Sbjct: 837 VGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKE 886
>gb|AAP86656.1| 26S proteasome subunit RPN1b [Arabidopsis thaliana]
Length = 891
Score = 151 bits (382), Expect = 3e-36
Identities = 79/110 (71%), Positives = 90/110 (81%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHYVLYFLVLAMQ P M+LTV ++LKP+ VP+RVGQAVDV
Sbjct: 786 LDMKSIILGKYHYVLYFLVLAMQ-----------PRMMLTVDQSLKPISVPVRVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKYIP+SP+LE FVILKE
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLSPILEGFVILKE 884
>dbj|BAD54002.1| putative 26S proteasome regulatory subunit S2 [Oryza sativa
(japonica cultivar-group)]
Length = 822
Score = 145 bits (365), Expect = 3e-34
Identities = 76/110 (69%), Positives = 88/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 717 LDMKSIILGKYHYMLYILTLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 765
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL++
Sbjct: 766 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRK 815
>dbj|BAB78497.1| 26S proteasome regulatory particle non-ATPase subunit1b [Oryza
sativa (japonica cultivar-group)]
Length = 238
Score = 145 bits (365), Expect = 3e-34
Identities = 76/110 (69%), Positives = 88/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 133 LDMKSIILGKYHYMLYILTLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 181
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL++
Sbjct: 182 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILRK 231
>ref|XP_464147.1| putative 26S proteasome regulatory subunit S2 [Oryza sativa
(japonica cultivar-group)] gi|51963868|ref|XP_506717.1|
PREDICTED OJ1008_C03.11 gene product [Oryza sativa
(japonica cultivar-group)] gi|45736056|dbj|BAD13082.1|
putative 26S proteasome regulatory subunit S2 [Oryza
sativa (japonica cultivar-group)]
Length = 898
Score = 144 bits (363), Expect = 5e-34
Identities = 77/110 (70%), Positives = 87/110 (79%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S GKYHY+LY +VLAMQ P MLLTV E+LKPL VP+RVGQAVDV
Sbjct: 793 LDMKSTILGKYHYILYIIVLAMQ-----------PRMLLTVDEDLKPLSVPVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKYIP++ VLE FVILK+
Sbjct: 842 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILKK 891
>ref|XP_450542.1| putative proteasome 26S non-ATPase subunit 2 [Oryza sativa
(japonica cultivar-group)] gi|48716897|dbj|BAD23592.1|
putative proteasome 26S non-ATPase subunit 2 [Oryza
sativa (japonica cultivar-group)]
gi|48716761|dbj|BAD23463.1| putative proteasome 26S
non-ATPase subunit 2 [Oryza sativa (japonica
cultivar-group)]
Length = 891
Score = 141 bits (356), Expect = 3e-33
Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 11/109 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHY+LY L LAMQ P MLLTV E+LKPL VP+ VGQAVDV
Sbjct: 786 LDMKSIILGKYHYMLYILALAMQ-----------PRMLLTVDEDLKPLSVPVCVGQAVDV 834
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILK 110
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL+
Sbjct: 835 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILR 883
>dbj|BAB78496.1| 26S proteasome regulatory particle non-ATPase subunit1a [Oryza
sativa (japonica cultivar-group)]
Length = 107
Score = 139 bits (350), Expect = 2e-32
Identities = 73/101 (72%), Positives = 81/101 (79%), Gaps = 11/101 (10%)
Query: 10 GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDVVGQAGRPK 69
GKYHY+LY L LAMQ P MLLTV E+LKPL VP+ VGQAVDVVGQAGRPK
Sbjct: 10 GKYHYMLYILALAMQ-----------PRMLLTVDEDLKPLSVPVCVGQAVDVVGQAGRPK 58
Query: 70 KITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILK 110
ITGFQTHST VLLAAG+RAELATEKY+P++PVLE FVIL+
Sbjct: 59 TITGFQTHSTPVLLAAGERAELATEKYLPLTPVLEGFVILR 99
>emb|CAB79649.1| putative protein [Arabidopsis thaliana] gi|2842489|emb|CAA16886.1|
putative protein [Arabidopsis thaliana]
gi|15235308|ref|NP_194576.1| 26S proteasome regulatory
subunit, putative [Arabidopsis thaliana]
gi|7485895|pir||T04617 hypothetical protein F20O9.150 -
Arabidopsis thaliana
Length = 1103
Score = 130 bits (328), Expect = 6e-30
Identities = 70/103 (67%), Positives = 82/103 (78%), Gaps = 12/103 (11%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ S+ GKYHYVLYFLVLAMQ P M+LTV ++LKP+ VP+RVGQAVDV
Sbjct: 889 LDMKSIILGKYHYVLYFLVLAMQ-----------PRMMLTVDQSLKPISVPVRVGQAVDV 937
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKY-IPISPVL 103
VGQAGRPK ITGFQTHST VLLAAG+RAELATEKY +P+ P+L
Sbjct: 938 VGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYVVPLIPLL 980
>gb|AAH90101.1| MGC97650 protein [Xenopus tropicalis]
gi|62751452|ref|NP_001015819.1| MGC97650 protein
[Xenopus tropicalis]
Length = 897
Score = 125 bits (313), Expect = 3e-28
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 793 LDVRNIVLGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 842 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 891
>gb|AAH68957.1| MGC83233 protein [Xenopus laevis]
Length = 897
Score = 125 bits (313), Expect = 3e-28
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 793 LDVRNIVLGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 842 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 891
>emb|CAG06387.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 125 bits (313), Expect = 3e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HY+LY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 230 LDVKNIILGKSHYILYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 278
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 279 VGQAGKPKAITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 328
>gb|AAH68911.1| Unknown (protein for MGC:83116) [Xenopus laevis]
Length = 897
Score = 125 bits (313), Expect = 3e-28
Identities = 66/110 (60%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 793 LDVRNIVLGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 841
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+Y+P++P+LE FVIL++
Sbjct: 842 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEYLPVTPILEGFVILRK 891
>gb|AAH02368.1| Proteasome 26S non-ATPase subunit 2 [Homo sapiens]
gi|12804277|gb|AAH02997.1| Proteasome 26S non-ATPase
subunit 2 [Homo sapiens] gi|6174930|sp|Q13200|PSD2_HUMAN
26S proteasome non-ATPase regulatory subunit 2 (26S
proteasome regulatory subunit RPN1) (26S proteasome
regulatory subunit S2) (26S proteasome subunit p97)
(Tumor necrosis factor type 1 receptor associated
protein 2) (55.11 protein) gi|25777602|ref|NP_002799.3|
proteasome 26S non-ATPase subunit 2 [Homo sapiens]
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>ref|NP_598862.1| proteasome 26S non-ATPase subunit 2 [Mus musculus]
gi|19354140|gb|AAH24830.1| Psmd2 protein [Mus musculus]
gi|20072725|gb|AAH27388.1| Proteasome 26S non-ATPase
subunit 2 [Mus musculus] gi|18204835|gb|AAH21508.1|
Proteasome 26S non-ATPase subunit 2 [Mus musculus]
gi|20379869|gb|AAH27822.1| Proteasome 26S non-ATPase
subunit 2 [Mus musculus] gi|20379865|gb|AAH27767.1|
Proteasome 26S non-ATPase subunit 2 [Mus musculus]
gi|20809387|gb|AAH28851.1| Proteasome 26S non-ATPase
subunit 2 [Mus musculus]
gi|51701831|sp|Q8VDM4|PSD2_MOUSE 26S proteasome
non-ATPase regulatory subunit 2 (26S proteasome
regulatory subunit RPN1) (26S proteasome regulatory
subunit S2) (26S proteasome subunit p97)
gi|21410364|gb|AAH31128.1| Proteasome 26S non-ATPase
subunit 2 [Mus musculus]
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>gb|AAH23049.1| Psmd2 protein [Mus musculus]
Length = 615
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 511 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 559
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 560 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 609
>gb|AAP88738.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 [Homo
sapiens] gi|60656351|gb|AAX32739.1| proteasome 26S
subunit 2 [synthetic construct]
gi|60656349|gb|AAX32738.1| proteasome 26S subunit 2
[synthetic construct] gi|14043916|gb|AAH07897.1|
Proteasome 26S non-ATPase subunit 2 [Homo sapiens]
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>gb|AAP88737.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
[synthetic construct] gi|60653297|gb|AAX29343.1|
proteasome 26S subunit 2 [synthetic construct]
gi|60653295|gb|AAX29342.1| proteasome 26S subunit 2
[synthetic construct]
Length = 909
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
>ref|XP_213571.2| PREDICTED: similar to Proteasome 26S non-ATPase subunit 2 [Rattus
norvegicus]
Length = 908
Score = 123 bits (309), Expect = 9e-28
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 2 LELPSV**GKYHYVLYFLVLAMQLTLGYYILLQKPTMLLTVGENLKPLLVPLRVGQAVDV 61
L++ ++ GK HYVLY LV AMQ P ML+T E L+PL V +RVGQAVDV
Sbjct: 804 LDVRNIILGKSHYVLYGLVAAMQ-----------PRMLVTFDEELRPLPVSVRVGQAVDV 852
Query: 62 VGQAGRPKKITGFQTHSTSVLLAAGDRAELATEKYIPISPVLEAFVILKE 111
VGQAG+PK ITGFQTH+T VLLA G+RAELATE+++P++P+LE FVIL++
Sbjct: 853 VGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.333 0.149 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,329,057
Number of Sequences: 2540612
Number of extensions: 6220553
Number of successful extensions: 17192
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 17055
Number of HSP's gapped (non-prelim): 86
length of query: 112
length of database: 863,360,394
effective HSP length: 88
effective length of query: 24
effective length of database: 639,786,538
effective search space: 15354876912
effective search space used: 15354876912
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146719.10