BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146711.8 + phase: 0
(207 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana] g... 243 3e-63
gb|AAO41891.1| putative selenium-binding protein [Arabidopsis th... 194 2e-48
gb|AAD24821.1| putative selenium-binding protein [Arabidopsis th... 194 2e-48
dbj|BAD67155.1| PPR986-12 [Physcomitrella patens] 182 7e-45
ref|XP_470100.1| hypothetical protein [Oryza sativa (japonica cu... 181 1e-44
gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana] gi|15... 180 3e-44
ref|XP_477217.1| putative pentatricopeptide (PPR) repeat-contain... 179 3e-44
gb|AAF14834.1| hypothetical protein [Arabidopsis thaliana] gi|60... 179 4e-44
ref|XP_476149.1| 'unknown protein, contains PPR repeat' [Oryza s... 179 6e-44
gb|AAU44101.1| unknown protein [Oryza sativa (japonica cultivar-... 178 7e-44
gb|AAU90328.1| putative pentatricopeptide repeat domain containi... 178 1e-43
ref|NP_567948.1| pentatricopeptide (PPR) repeat-containing prote... 178 1e-43
dbj|BAD67156.1| PPR423-6 [Physcomitrella patens] 178 1e-43
gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gi|15... 173 3e-42
emb|CAB61996.1| putative protein [Arabidopsis thaliana] gi|15229... 172 4e-42
gb|AAL07167.1| putative selenium-binding protein [Arabidopsis th... 172 4e-42
dbj|BAD67154.1| PPR868-14 [Physcomitrella patens] 172 5e-42
dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containi... 172 5e-42
ref|NP_173449.1| pentatricopeptide (PPR) repeat-containing prote... 171 9e-42
ref|NP_190486.2| pentatricopeptide (PPR) repeat-containing prote... 171 9e-42
>dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|15239085|ref|NP_201360.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 243 bits (619), Expect = 3e-63
Identities = 123/202 (60%), Positives = 152/202 (74%), Gaps = 3/202 (1%)
Query: 1 MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG 60
M+DLLGRA R EEA ML E NPD++ WRTLL+ACK+H +VEMAE+ +K+L+ P D
Sbjct: 510 MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDE 569
Query: 61 GTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDL-SHPRA 119
GT IL++N+YAS GKW+ VIEMKS +D++LKK PAMSWV+I++E HTFMAGDL SHP +
Sbjct: 570 GTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNS 629
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+I E L ELI+K LGY D V QD+EE K +L+ HSEKLAIAFA+W+ G
Sbjct: 630 EQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVG--G 687
Query: 180 AIRIFKNLRVCGDCHSWIKFVS 201
+IRI KNLRVC DCHSWIK VS
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVS 709
>gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 194 bits (492), Expect = 2e-48
Identities = 95/204 (46%), Positives = 140/204 (68%), Gaps = 2/204 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
MIDLLG+A + ++A L+ E + PD + WRTLL AC++ + +AE KK++ P D
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED 460
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
GT+ LL+NIYA++ KWD+V E+++ RD +KK P SW+++++++H F+ GD SHP+
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI 520
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
E+S+ L++LI ++ +GY P+T FVLQDLE E+ +L +HSEKLA+AF L T
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL-MTLPIEK 579
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLL 203
IRI KNLR+CGDCH + K S L
Sbjct: 580 VIRIRKNLRICGDCHVFCKLASKL 603
>gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|25411043|pir||C84453 probable selenium-binding
protein [imported] - Arabidopsis thaliana
gi|15227724|ref|NP_178481.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 194 bits (492), Expect = 2e-48
Identities = 95/204 (46%), Positives = 140/204 (68%), Gaps = 2/204 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
MIDLLG+A + ++A L+ E + PD + WRTLL AC++ + +AE KK++ P D
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED 460
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
GT+ LL+NIYA++ KWD+V E+++ RD +KK P SW+++++++H F+ GD SHP+
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI 520
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
E+S+ L++LI ++ +GY P+T FVLQDLE E+ +L +HSEKLA+AF L T
Sbjct: 521 VEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL-MTLPIEK 579
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLL 203
IRI KNLR+CGDCH + K S L
Sbjct: 580 VIRIRKNLRICGDCHVFCKLASKL 603
>dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]
Length = 986
Score = 182 bits (461), Expect = 7e-45
Identities = 94/205 (45%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Query: 1 MIDLLGRAKRFEEAT-MLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DL GRA EA +I+ PD W LL AC++H VE+AEK +K L+ P D
Sbjct: 757 MVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPND 816
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G ++L+NIYA+AG W V +M+ D + K P SW+++D +VHTF + D +HP+
Sbjct: 817 NGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQT 876
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI L L ++ LGY PDT++VL D+E+ +K AL+YHSE+LAI + L KT T
Sbjct: 877 EEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKT-PPLT 935
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLT 204
I I KNLRVCGDCH+ KF+S +T
Sbjct: 936 PIVISKNLRVCGDCHTATKFISKIT 960
Score = 35.4 bits (80), Expect = 1.0
Identities = 39/141 (27%), Positives = 60/141 (41%), Gaps = 21/141 (14%)
Query: 1 MIDLLGRAKRFEEATMLI----EEGKNPDVIQWRTLLNACKIHGEVEMAEKF---MKKML 53
MI L R RF++A L EEG PD + + +LL AC +E +K MK++
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVG 342
Query: 54 DQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGD 113
GT IL ++Y G ++ +E+ +K +SW +AG
Sbjct: 343 WDTEIYVGTAIL--SMYTKCGSMEDALEVFDL-----VKGRNVVSWT-------AMIAGF 388
Query: 114 LSHPRAHEISEMLHELIEKVI 134
H R E +++IE I
Sbjct: 389 AQHGRIDEAFLFFNKMIESGI 409
>ref|XP_470100.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 704
Score = 181 bits (459), Expect = 1e-44
Identities = 91/206 (44%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLI-EEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++DLLGR+ +EA LI PD + W+TLL+ACK +MAE+ K++++ P D
Sbjct: 483 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 542
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
+++LL+NI A++ +W +V E++ A RD ++K P +SWV++ +H F GD SHPR
Sbjct: 543 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 602
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI E L E++ K+ GY+PD VL D+E+E+K +L +HSEKLAIAFA + + +
Sbjct: 603 KEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFA-FLSLPEGV 661
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
IR+ KNLRVC DCH IK +S +TG
Sbjct: 662 PIRVMKNLRVCDDCHLAIKLMSQVTG 687
>gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|15217508|ref|NP_172412.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25345445|pir||D86227 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 705
Score = 180 bits (456), Expect = 3e-44
Identities = 87/203 (42%), Positives = 134/203 (65%), Gaps = 3/203 (1%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+D+LGRA RF EA +I+ PD W +LL AC+ H ++++AE KK+++ P +
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDL-SHPR 118
GT+ILL+N+YAS G+W +V E++ + ++K+P SW +++ +VH F G + SHP
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 119 AHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKN 178
I ++L EL + GYNPD + L D++EE+K+++L YHSE+LA+A+AL K +
Sbjct: 595 QESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLK-LSEG 653
Query: 179 TAIRIFKNLRVCGDCHSWIKFVS 201
IR+ KNLRVC DCH+ IK +S
Sbjct: 654 IPIRVMKNLRVCSDCHTAIKIIS 676
>ref|XP_477217.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa (japonica
cultivar-group)] gi|33146689|dbj|BAC80084.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 720
Score = 179 bits (455), Expect = 3e-44
Identities = 87/206 (42%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++DL GR+ ++A IEE N + I W+TLL+AC++H E A+ +K++ D
Sbjct: 491 IVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCD 550
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G++++L+NIYA+ KW + E++ + ++ +++K P SW+ + VHTF+AGD SHP++
Sbjct: 551 AGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQS 610
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI L +L+E++ +GY T V+ D+E+E++ +AL +HSEKLAIAF + T T
Sbjct: 611 AEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIIST-PSGT 669
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
+RIFKNLRVC DCH IK++SL TG
Sbjct: 670 PLRIFKNLRVCEDCHEAIKYISLATG 695
>gb|AAF14834.1| hypothetical protein [Arabidopsis thaliana]
gi|6091739|gb|AAF03451.1| hypothetical protein
[Arabidopsis thaliana] gi|15232837|ref|NP_186850.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana]
Length = 825
Score = 179 bits (454), Expect = 4e-44
Identities = 89/203 (43%), Positives = 132/203 (64%), Gaps = 3/203 (1%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAP-R 58
M+DLLGR RF EA L++E PD I W ++LNAC+IH +AE+ +K+ R
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654
Query: 59 DGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPR 118
D ++ ++NIYA+AG+W+ V ++K A R+ +KK PA SWV+++ ++H F + D +HP
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714
Query: 119 AHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKN 178
EI ++EL ++ GY PDT V+QD++E+ KI +L YHSE+LA+AFAL T +
Sbjct: 715 GDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIST-PEG 773
Query: 179 TAIRIFKNLRVCGDCHSWIKFVS 201
I + KNLR C DCH+ IK +S
Sbjct: 774 CPIVVMKNLRACRDCHAAIKLIS 796
>ref|XP_476149.1| 'unknown protein, contains PPR repeat' [Oryza sativa (japonica
cultivar-group)] gi|48475165|gb|AAT44234.1| 'unknown
protein, contains PPR repeat' [Oryza sativa (japonica
cultivar-group)]
Length = 822
Score = 179 bits (453), Expect = 6e-44
Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 2/205 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLL R+ +EA I E D + W+TLL AC+ H +E+ E K +++ PRD
Sbjct: 593 MVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRD 652
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
++LL+N+YA AG WD V ++SA RD L K +SW++++ H F AGD SHPRA
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+I L L+ ++ +GY PDT VL D+ +E K L HSEK+A+AF L T
Sbjct: 713 QDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK- 771
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLT 204
IRIFKNLRVC DCHS IK++S T
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKAT 796
>gb|AAU44101.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 687
Score = 178 bits (452), Expect = 7e-44
Identities = 86/206 (41%), Positives = 132/206 (63%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+ LL R R +EA IE DV+ WR+LL++C+++ + + +++ P+D
Sbjct: 458 MVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKD 517
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
GT++LL+N+YA A +WD V++++ R+L ++K P +SW+ + EVH F + D HP
Sbjct: 518 VGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYM 577
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+I++ L ELI+K+ +GY P+ L D+E+E+K L YHSEKLA+AF L +T K
Sbjct: 578 EQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRT-PKGE 636
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
AIRI KN+R+C DCH IK +SL TG
Sbjct: 637 AIRIMKNVRICDDCHVAIKLISLATG 662
>gb|AAU90328.1| putative pentatricopeptide repeat domain containing protein
[Solanum demissum]
Length = 828
Score = 178 bits (451), Expect = 1e-43
Identities = 93/207 (44%), Positives = 132/207 (62%), Gaps = 3/207 (1%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ-APR 58
MID+L R+ RF EA LI E PD + W ++LN+C+IH ++A+K ++ A R
Sbjct: 589 MIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR 648
Query: 59 DGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPR 118
D ++ ++NIYA AGKW+N ++K A R+ +KK A SWV+ID VH F A D +HP+
Sbjct: 649 DAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQ 708
Query: 119 AHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKN 178
+I ++ L+E + GY PDT LQ+++EE KI +L YHSE+LAIAFAL T +
Sbjct: 709 TEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINT-PEG 767
Query: 179 TAIRIFKNLRVCGDCHSWIKFVSLLTG 205
+ I I KNLR C DCH+ IK +S + G
Sbjct: 768 SPIIIMKNLRACVDCHAAIKVISKIVG 794
>ref|NP_567948.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 823
Score = 178 bits (451), Expect = 1e-43
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+D+ GRA + E A I+ PD W LL+AC++HG V++ + + + + P
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G H+LL+N+YASAGKW+ V E++S L+KTP S +++D +V F G+ +HP
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 713
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
E+ L L K+ +GY PD +FVLQD+E+++K L HSE+LAIAFAL T K T
Sbjct: 714 EEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAK-T 772
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLT 204
IRIFKNLRVCGDCHS KF+S +T
Sbjct: 773 TIRIFKNLRVCGDCHSVTKFISKIT 797
Score = 36.6 bits (83), Expect = 0.46
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 1 MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPR-D 59
+ D+ G+ R E+A L + + + W TL+ HG E A K+MLD+ + D
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 60 GGTHILLTNIYASAGKWD 77
T + L + + +G D
Sbjct: 552 HITFVTLLSACSHSGLVD 569
>dbj|BAD67156.1| PPR423-6 [Physcomitrella patens]
Length = 423
Score = 178 bits (451), Expect = 1e-43
Identities = 92/206 (44%), Positives = 129/206 (61%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
++ LLGRA+RF+EA LI + PD W TLL AC+IHG + +AE L R+
Sbjct: 194 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARN 253
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
+ILL+N+YA+AG+WD+V +++ ++K P SW+++D +H F+A D SHP
Sbjct: 254 PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPET 313
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI L L ++ GY PDT+ VL DL + + ++L HSE+LAIA+ L KT T
Sbjct: 314 AEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKT-PPGT 372
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
IRIFKNLR+CGDCH+ KF+S L G
Sbjct: 373 PIRIFKNLRICGDCHTASKFISKLVG 398
>gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|15227144|ref|NP_179798.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|25345463|pir||F84608 hypothetical protein At2g22070
[imported] - Arabidopsis thaliana
Length = 786
Score = 173 bits (438), Expect = 3e-42
Identities = 86/206 (41%), Positives = 130/206 (62%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DL GRA +EA IE+ PDV+ W +LL+AC++H +++ + +++L P +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G + L N+Y++ GKW+ +++ + +D R+KK SW+++ +VH F D +HP
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+EI + ++ +++ +GY PDT VL DLEEE K L +HSEKLAIAF L T K T
Sbjct: 677 NEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDK-T 735
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
+RI KNLRVC DCH+ IKF+S L G
Sbjct: 736 TLRIMKNLRVCNDCHTAIKFISKLVG 761
>emb|CAB61996.1| putative protein [Arabidopsis thaliana]
gi|15229097|ref|NP_190483.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
gi|11358281|pir||T46116 hypothetical protein T2J13.20 -
Arabidopsis thaliana
Length = 1229
Score = 172 bits (437), Expect = 4e-42
Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 5/209 (2%)
Query: 1 MIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGRA + +EA I++ P+ W LL AC++H + ++ K+ AP
Sbjct: 452 MVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G ++LL+NIYA AG+W+ V +++ + LKK P S V+++R +HTF+ GD SHP++
Sbjct: 512 SGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQS 571
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTC---- 175
EI L L++K+ LGY PD++ L D+EEE K + L HSEKLAI FAL T
Sbjct: 572 DEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEE 631
Query: 176 GKNTAIRIFKNLRVCGDCHSWIKFVSLLT 204
N IRI KNLR+CGDCH K +S +T
Sbjct: 632 DSNNTIRITKNLRICGDCHVAAKLISQIT 660
>gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|10177180|dbj|BAB10314.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|15239745|ref|NP_199702.1| pentatricopeptide (PPR)
repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 172 bits (437), Expect = 4e-42
Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Query: 1 MIDLLGRAKRFEEAT-MLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGR+ +EA ++ PD + W+ LL AC++ G VEM ++ ++D P D
Sbjct: 417 MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G ++ L+N+YAS G W V EM+ ++ ++K P S +DID +H F+ D SHP+A
Sbjct: 477 SGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKA 536
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI+ ML E+ +K+ GY P T VL +LEEE K + L+YHSEK+A AF L T
Sbjct: 537 KEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLIST-SPGK 595
Query: 180 AIRIFKNLRVCGDCHSWIKFVS 201
IRI KNLR+C DCHS IK +S
Sbjct: 596 PIRIVKNLRICEDCHSSIKLIS 617
>dbj|BAD67154.1| PPR868-14 [Physcomitrella patens]
Length = 868
Score = 172 bits (436), Expect = 5e-42
Identities = 91/202 (45%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGRA R +EA I+ PD+ W LL ACK H V++AE+ +L+ P
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSY 698
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
+I L+NIYA AG+WD+ +++ D LKK S ++ID +HTF+A D +HP
Sbjct: 699 ASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEI 758
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
I L L +++ GY PD +FVL D+++ +K AL +HSEKLAIA+ L KT T
Sbjct: 759 DAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKT-PSGT 817
Query: 180 AIRIFKNLRVCGDCHSWIKFVS 201
IRI KNLRVCGDCH+ KF+S
Sbjct: 818 PIRIMKNLRVCGDCHTATKFIS 839
>dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 922
Score = 172 bits (436), Expect = 5e-42
Identities = 88/205 (42%), Positives = 125/205 (60%), Gaps = 2/205 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLLGR + A I + PD + W LL ACKIH E+ ++ +K+ P +
Sbjct: 693 MVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSN 752
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
G +++L+NIY+S G W V E++ + + K P SW I ++H+F+ GD H +
Sbjct: 753 AGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQI 812
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
EI L EL + GY PDT+FVL D++EE+K S+L YHSEKLA+A+ L T K
Sbjct: 813 EEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLAT-PKGM 871
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLT 204
I+I KNLR+CGDCH++IKFVS +T
Sbjct: 872 PIQILKNLRICGDCHTFIKFVSHVT 896
>ref|NP_173449.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 760
Score = 171 bits (434), Expect = 9e-42
Identities = 84/206 (40%), Positives = 130/206 (62%), Gaps = 2/206 (0%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M++LLGRA + +EA LI+E PD W LLN+C++ V++AE +K+ P +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
GT++LL+NIYA+ G W V +++ L LKK P SW+ + V+T +AGD SHP+
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQI 650
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNT 179
+I+E + E+ +++ G+ P+ F L D+EE+++ L+ HSEKLA+ F L T T
Sbjct: 651 DQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNT-PDGT 709
Query: 180 AIRIFKNLRVCGDCHSWIKFVSLLTG 205
+++ KNLR+CGDCH+ IKF+S G
Sbjct: 710 PLQVIKNLRICGDCHAVIKFISSYAG 735
>ref|NP_190486.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|58013020|gb|AAW62963.1| embryo-defective
2261 [Arabidopsis thaliana] gi|58013018|gb|AAW62962.1|
embryo-defective 2261 [Arabidopsis thaliana]
Length = 850
Score = 171 bits (434), Expect = 9e-42
Identities = 88/210 (41%), Positives = 127/210 (59%), Gaps = 6/210 (2%)
Query: 1 MIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRD 59
M+DLL RA +A I DV+ WRT L AC++H E+ + +K+L+ P +
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 60 GGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRA 119
+I L+NIYA AGKW+ EM+ ++ L K SW+++ ++H F GD +HP A
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 120 HEISEMLHELIEKVITLGYNPDTKFVLQDLEEE----KKISALYYHSEKLAIAFALWKTC 175
H+I + L LI ++ GY PDT VL LEEE +K LY HSEK+A+AF L T
Sbjct: 737 HQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLIST- 795
Query: 176 GKNTAIRIFKNLRVCGDCHSWIKFVSLLTG 205
K+ +R+FKNLRVCGDCH+ +K++S ++G
Sbjct: 796 SKSRPVRVFKNLRVCGDCHNAMKYISTVSG 825
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 362,755,881
Number of Sequences: 2540612
Number of extensions: 14317135
Number of successful extensions: 36219
Number of sequences better than 10.0: 594
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 33830
Number of HSP's gapped (non-prelim): 1894
length of query: 207
length of database: 863,360,394
effective HSP length: 122
effective length of query: 85
effective length of database: 553,405,730
effective search space: 47039487050
effective search space used: 47039487050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)
Medicago: description of AC146711.8