BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146693.3 - phase: 0 /pseudo
         (634 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_001004398.1| Amphiphysin [Gallus gallus] gi|62843|emb|CAA...    36  3.3
ref|NP_071553.1| amphiphysin 1 [Rattus norvegicus] gi|2145467|em...    35  9.7
gb|AAB21242.1| uroporphyrinogen III synthase, UROIIIS [human, Pe...    35  9.7

>ref|NP_001004398.1| Amphiphysin [Gallus gallus] gi|62843|emb|CAA42953.1| Amphiphysin
           [Gallus gallus] gi|86184|pir||S22700 amphiphysin -
           chicken gi|1703280|sp|P50478|AMPH_CHICK Amphiphysin
          Length = 682

 Score = 36.2 bits (82), Expect = 3.3
 Identities = 21/55 (38%), Positives = 27/55 (48%), Gaps = 7/55 (12%)

Query: 318 PNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTP 372
           P  +S   SP + P  +L+P +P   RPKSP    K PP+       P  PK TP
Sbjct: 264 PEEVSPLPSPTASPNHMLAPASPAPARPKSPTQLRKGPPV-------PPLPKLTP 311


>ref|NP_071553.1| amphiphysin 1 [Rattus norvegicus] gi|2145467|emb|CAA73808.1|
           amphiphysin [Rattus norvegicus]
           gi|14916529|sp|O08838|AMPH_RAT Amphiphysin
          Length = 683

 Score = 34.7 bits (78), Expect = 9.7
 Identities = 20/55 (36%), Positives = 26/55 (46%), Gaps = 7/55 (12%)

Query: 318 PNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTP 372
           P   S   SP + P   L+P +P  +RP+SP    K PP+       P  PK TP
Sbjct: 264 PEEASPLPSPTASPNHTLAPASPAPVRPRSPSQTRKGPPV-------PPLPKVTP 311


>gb|AAB21242.1| uroporphyrinogen III synthase, UROIIIS [human, Peptide Mutant, 265
           aa]
          Length = 265

 Score = 34.7 bits (78), Expect = 9.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 324 RLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPP 356
           RL  NS P++I  P  PK L+P +P    +WPP
Sbjct: 229 RLISNSWPQVIFPPWPPKLLQPSAPLRLARWPP 261


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.364    0.164    0.631 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 882,245,688
Number of Sequences: 2540612
Number of extensions: 31221747
Number of successful extensions: 145482
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 145481
Number of HSP's gapped (non-prelim): 3
length of query: 634
length of database: 863,360,394
effective HSP length: 134
effective length of query: 500
effective length of database: 522,918,386
effective search space: 261459193000
effective search space used: 261459193000
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 78 (34.7 bits)