BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146651.7 - phase: 0 /pseudo
         (394 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_973600.1| katanin, putative [Arabidopsis thaliana]             451  e-125
dbj|BAD73365.1| vacuolar protein sorting factor 4B-like [Oryza s...   442  e-123
pir||B84758 probable katanin [imported] - Arabidopsis thaliana        438  e-121
dbj|BAC78569.1| katanin [Oryza sativa (japonica cultivar-group)]...   433  e-120
gb|AAM61422.1| putative katanin [Arabidopsis thaliana] gi|201970...   431  e-119
ref|NP_916186.1| katanin p60 subunit A 1-like [Oryza sativa (jap...   421  e-116
ref|NP_916872.1| putative katanin [Oryza sativa (japonica cultiv...   389  e-107
ref|NP_112593.1| hypothetical protein LOC83473 [Homo sapiens] gi...   286  8e-76
ref|XP_547587.1| PREDICTED: similar to RIKEN cDNA 3110023G01 [Ca...   274  3e-72
ref|NP_081997.1| hypothetical protein LOC71206 [Mus musculus] gi...   267  5e-70
ref|XP_225707.3| PREDICTED: similar to RIKEN cDNA 3110023G01 [Ra...   263  9e-69
ref|XP_414699.1| PREDICTED: similar to RIKEN cDNA 4933439B08 [Ga...   259  1e-67
ref|NP_999733.1| katanin p60 [Strongylocentrotus purpuratus] gi|...   242  2e-62
emb|CAG07322.1| unnamed protein product [Tetraodon nigroviridis]      240  5e-62
gb|AAP92128.1| putative ATPase ATP1 [Oryza sativa (japonica cult...   240  6e-62
ref|XP_543146.1| PREDICTED: similar to katanin p60 subunit A-lik...   239  1e-61
gb|AAD53310.1| katanin p60 [Xenopus laevis] gi|60390218|sp|Q9PUL...   239  1e-61
ref|XP_321284.2| ENSANGP00000018492 [Anopheles gambiae str. PEST...   239  1e-61
emb|CAI16431.1| katanin p60 (ATPase-containing) subunit A 1 [Hom...   239  1e-61
emb|CAI20705.1| novel protein similar to vertebrate katanin p60 ...   239  1e-61

>ref|NP_973600.1| katanin, putative [Arabidopsis thaliana]
          Length = 393

 Score =  451 bits (1160), Expect = e-125
 Identities = 253/403 (62%), Positives = 290/403 (71%), Gaps = 23/403 (5%)

Query: 3   ADDEPMPTRWSFEEFKKYYDVRLGRKKLVENGENAVSNGNSSGIASNGNSHGKVTSDRAI 62
           A DEP  TRWSF EFK +YD + GRKKL E     VSN +     S+  ++G V ++ + 
Sbjct: 2   ATDEPSQTRWSFLEFKTFYDAKFGRKKLPEED---VSNKDQPEDGSSNGNNGDVNNNSS- 57

Query: 63  YDQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWE 122
                +Q  N    NG   N + EKPKKS+ PPFESAE RTLAESLSRDIIRG+PN+KWE
Sbjct: 58  --PVTNQDGNTALANG---NVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWE 112

Query: 123 SIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTT 182
           SIKGLENAK+LLKEAVVMPIKYP YF GLL+PWKGILLFGPPGTGKTMLAKAVATECNTT
Sbjct: 113 SIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTT 172

Query: 183 FFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQR-GEGRSEHEASR 241
           FFNISASS+VSKWRGDSEKL++VLF+LARHHAP+TIFLDEIDAIISQR GEGRSEHEASR
Sbjct: 173 FFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASR 232

Query: 242 RLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR--NQKQEEQCLRNSFLC 299
           RLKTELLIQMDGL +T+ELVFVLAATNLPWELDAAMLRRLEKR      + +  R  F  
Sbjct: 233 RLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEM 292

Query: 300 SLMRN-------RCPMIYWWTGQKDTQARIFAYFVKKQQCSH*DA**HNLNKNQMWCPK- 351
            +             ++    G   +  RI       Q      A    L   +   P+ 
Sbjct: 293 LIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLA---ILEDREDVVPED 349

Query: 352 KLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
           +LPK+GP++PED++ AL NTRPSAHL AH YD FN DYGSQIL
Sbjct: 350 ELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDYGSQIL 392


>dbj|BAD73365.1| vacuolar protein sorting factor 4B-like [Oryza sativa (japonica
           cultivar-group)] gi|56201862|dbj|BAD73312.1| vacuolar
           protein sorting factor 4B-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 410

 Score =  442 bits (1138), Expect = e-123
 Identities = 252/415 (60%), Positives = 290/415 (69%), Gaps = 27/415 (6%)

Query: 1   MAADDEPMPTRWSFEEFKKYYDVRLGRKKLVENGENAVSNGN-----------SSGIASN 49
           M   DEP  TRW+FE+F+ YY+VRLG ++     E+   +G            S+G    
Sbjct: 1   MTGADEPSITRWTFEDFEVYYEVRLGIRREPGGDEDGDGDGGGGRGYAPLGSGSAGSTRP 60

Query: 50  GNSHGKVTSDRAIYDQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLS 109
             +H    +D A+++QF+   +     NG    G    P+KSLLP FESAEMR LAE+L 
Sbjct: 61  SAAHANGGADLAVFEQFERLERKVELRNGAIEAG---PPQKSLLPSFESAEMRNLAETLL 117

Query: 110 RDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKT 169
           RDIIRGSP+VKWESIKGLENAKRLLKEAVVMPIKYPKYF GLLSPWKGILLFGPPGTGKT
Sbjct: 118 RDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGPPGTGKT 177

Query: 170 MLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQ 229
           MLAKAVATEC TTFFNISASSIVSKWRGDSEKLVKVLFELARHHAP+TIFLDEIDAIISQ
Sbjct: 178 MLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQ 237

Query: 230 RGEGRSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR-NQKQ 288
           RGE RSEHEASRRLKTELLIQMDGL +TD+LVFVLAATNLPWELDAAMLRRLEKR     
Sbjct: 238 RGEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKRILVPL 297

Query: 289 EEQCLRNSFLCSLMRN-----RCP---MIYWWTGQKDTQARIFAYFVKKQQCSH*DA**H 340
            EQ  R++    L+ +       P   ++    G   +  R+       Q      +   
Sbjct: 298 PEQEARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQPLRRLMS--- 354

Query: 341 NLNKNQMWCPK-KLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
            L   Q   P+ +LP+VGPV  ED+E ALRNTRPSAHL  H+Y+ FN DYGS +L
Sbjct: 355 VLEGRQEEVPEDELPEVGPVTTEDIELALRNTRPSAHLHVHRYEKFNQDYGSHVL 409


>pir||B84758 probable katanin [imported] - Arabidopsis thaliana
          Length = 393

 Score =  438 bits (1127), Expect = e-121
 Identities = 249/410 (60%), Positives = 285/410 (68%), Gaps = 37/410 (9%)

Query: 3   ADDEPMPTRWSFEEFKKYYDVRLGRKKLVENG-------ENAVSNGNSSGIASNGNSHGK 55
           A DEP  TRWSF EFK +YD + GRKKL E         E+  SNGN+  + +N +    
Sbjct: 2   ATDEPSQTRWSFLEFKTFYDAKFGRKKLPEEDVSNKDQPEDGSSNGNNGDVNNNSSP--- 58

Query: 56  VTSDRAIYDQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLSRDIIRG 115
           VT+ R              +    G +      KKS+ PPFESAE RTLAESLSRDIIRG
Sbjct: 59  VTNQRC-------------YVYSLGSDECFFCRKKSMFPPFESAETRTLAESLSRDIIRG 105

Query: 116 SPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAV 175
           +PN+KWESIKGLENAK+LLKEAVVMPIKYP YF GLL+PWKGILLFGPPGTGKTMLAKAV
Sbjct: 106 NPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAV 165

Query: 176 ATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQR-GEGR 234
           ATECNTTFFNISASS+VSKWRGDSEKL++VLF+LARHHAP+TIFLDEIDAIISQR GEGR
Sbjct: 166 ATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGR 225

Query: 235 SEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR--NQKQEEQC 292
           SEHEASRRLKTELLIQMDGL +T+ELVFVLAATNLPWELDAAMLRRLEKR      + + 
Sbjct: 226 SEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEA 285

Query: 293 LRNSFLCSLMRN-------RCPMIYWWTGQKDTQARIFAYFVKKQQCSH*DA**HNLNKN 345
            R  F   +             ++    G   +  RI       Q      A    L   
Sbjct: 286 RRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLA---ILEDR 342

Query: 346 QMWCPK-KLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
           +   P+ +LPK+GP++PED++ AL NTRPSAHL AH YD FN DYGSQIL
Sbjct: 343 EDVVPEDELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDYGSQIL 392


>dbj|BAC78569.1| katanin [Oryza sativa (japonica cultivar-group)]
           gi|57899262|dbj|BAD87507.1| katanin [Oryza sativa
           (japonica cultivar-group)]
          Length = 386

 Score =  433 bits (1113), Expect = e-120
 Identities = 244/392 (62%), Positives = 287/392 (72%), Gaps = 25/392 (6%)

Query: 16  EFKKYYDVRLGRKKLVENGENAVSNGNSSGIASNGNSHGKVTSDRAIYDQFQSQGQNPTH 75
           +FK +++ R G KK  E  +N  +NG ++G      S  K TSD A+Y+QF+ Q +    
Sbjct: 2   DFKGFWESRFGGKKEQEPEQNGHANGVANG------SVRKRTSDLAVYEQFEQQARQTEV 55

Query: 76  TNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLK 135
                 +G  +  +K LLP FESAEMR LAE+L RDIIRGSP+VKWESIKGLENAKRLLK
Sbjct: 56  RAAAIRDGNADAIQKPLLPSFESAEMRNLAETLLRDIIRGSPDVKWESIKGLENAKRLLK 115

Query: 136 EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKW 195
           EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASSIVSKW
Sbjct: 116 EAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKW 175

Query: 196 RGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLA 255
           RGDSEKLVKVLFELARHHAP+TIFLDEIDAIISQRGE RSEHEASRRLKTELLIQMDGL 
Sbjct: 176 RGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLT 235

Query: 256 RTDELVFVLAATNLPWELDAAMLRRLEKR-----NQKQEEQCLRNSFLCS-LMRNRCP-- 307
           +T++LVFVLAATNLPWELDAAMLRRLEKR      + +    +    L S   +   P  
Sbjct: 236 KTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEAEARHAMFEELLPSTTSKLEVPYD 295

Query: 308 -MIYWWTGQKDTQARIF----AYFVKKQQCSH*DA**HNLNKNQMWCPKKLPKVGPVVPE 362
            ++    G   +  R+     A    ++  S  +A      ++++   ++LP+VGP+ PE
Sbjct: 296 TLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSVLEA------RDELVPEEELPEVGPLKPE 349

Query: 363 DVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
           D+E ALRNTRPSAHL AH+Y+ FN DYGSQIL
Sbjct: 350 DIEVALRNTRPSAHLHAHRYEKFNQDYGSQIL 381


>gb|AAM61422.1| putative katanin [Arabidopsis thaliana] gi|20197082|gb|AAC26698.2|
           putative katanin [Arabidopsis thaliana]
           gi|18403587|ref|NP_565791.1| katanin, putative
           [Arabidopsis thaliana]
          Length = 384

 Score =  431 bits (1108), Expect = e-119
 Identities = 248/403 (61%), Positives = 283/403 (69%), Gaps = 32/403 (7%)

Query: 3   ADDEPMPTRWSFEEFKKYYDVRLGRKKLVENGENAVSNGNSSGIASNGNSHGKVTSDRAI 62
           A DEP  TRWSF           GRKKL E     VSN +     S+  ++G V ++ + 
Sbjct: 2   ATDEPSQTRWSF---------LFGRKKLPEED---VSNKDQPEDGSSNGNNGDVNNNSS- 48

Query: 63  YDQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWE 122
                +Q  N    NG   N + EKPKKS+ PPFESAE RTLAESLSRDIIRG+PN+KWE
Sbjct: 49  --PVTNQDGNTALANG---NVIREKPKKSMFPPFESAETRTLAESLSRDIIRGNPNIKWE 103

Query: 123 SIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTT 182
           SIKGLENAK+LLKEAVVMPIKYP YF GLL+PWKGILLFGPPGTGKTMLAKAVATECNTT
Sbjct: 104 SIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPPGTGKTMLAKAVATECNTT 163

Query: 183 FFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQR-GEGRSEHEASR 241
           FFNISASS+VSKWRGDSEKL++VLF+LARHHAP+TIFLDEIDAIISQR GEGRSEHEASR
Sbjct: 164 FFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASR 223

Query: 242 RLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR--NQKQEEQCLRNSFLC 299
           RLKTELLIQMDGL +T+ELVFVLAATNLPWELDAAMLRRLEKR      + +  R  F  
Sbjct: 224 RLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDPEARRGMFEM 283

Query: 300 SLMRN-------RCPMIYWWTGQKDTQARIFAYFVKKQQCSH*DA**HNLNKNQMWCPK- 351
            +             ++    G   +  RI       Q      A    L   +   P+ 
Sbjct: 284 LIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLA---ILEDREDVVPED 340

Query: 352 KLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
           +LPK+GP++PED++ AL NTRPSAHL AH YD FN DYGSQIL
Sbjct: 341 ELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDYGSQIL 383


>ref|NP_916186.1| katanin p60 subunit A 1-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 428

 Score =  421 bits (1081), Expect = e-116
 Identities = 246/414 (59%), Positives = 289/414 (69%), Gaps = 47/414 (11%)

Query: 16  EFKKYYDVRLGRKKLVENGENAVSNGNSSGIASNGNSHGKVTSDRAIYDQFQSQG----- 70
           +FK +++ R G KK  E  +N  +NG ++G      S  K TSD A+Y+QF+ Q      
Sbjct: 22  DFKGFWESRFGGKKEQEPEQNGHANGVANG------SVRKRTSDLAVYEQFEQQVFLDRR 75

Query: 71  ------QNPTHTNGFGP-----------NGVDEKPKKSLLPPFESAEMRTLAESLSRDII 113
                  +P     F             +G  +  +K LLP FESAEMR LAE+L RDII
Sbjct: 76  LVSCVVLDPRSVLLFQARQTEVRAAAIRDGNADAIQKPLLPSFESAEMRNLAETLLRDII 135

Query: 114 RGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAK 173
           RGSP+VKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAK
Sbjct: 136 RGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAK 195

Query: 174 AVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEG 233
           AVATEC TTFFNISASSIVSKWRGDSEKLVKVLFELARHHAP+TIFLDEIDAIISQRGE 
Sbjct: 196 AVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEA 255

Query: 234 RSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR-----NQKQ 288
           RSEHEASRRLKTELLIQMDGL +T++LVFVLAATNLPWELDAAMLRRLEKR      + +
Sbjct: 256 RSEHEASRRLKTELLIQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEAE 315

Query: 289 EEQCLRNSFLCS-LMRNRCP---MIYWWTGQKDTQARIF----AYFVKKQQCSH*DA**H 340
               +    L S   +   P   ++    G   +  R+     A    ++  S  +A   
Sbjct: 316 ARHAMFEELLPSTTSKLEVPYDTLVEKTEGYSGSDIRLVCKEAAMQPLRRLMSVLEA--- 372

Query: 341 NLNKNQMWCPKKLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
              ++++   ++LP+VGP+ PED+E ALRNTRPSAHL AH+Y+ FN DYGSQIL
Sbjct: 373 ---RDELVPEEELPEVGPLKPEDIEVALRNTRPSAHLHAHRYEKFNQDYGSQIL 423


>ref|NP_916872.1| putative katanin [Oryza sativa (japonica cultivar-group)]
          Length = 411

 Score =  389 bits (999), Expect = e-107
 Identities = 232/416 (55%), Positives = 275/416 (65%), Gaps = 28/416 (6%)

Query: 1   MAADDEPMPTRWSFEEFKKYYDVRLGRKKLVENGENAVSNGN-----------SSGIASN 49
           M   DEP  TRW+FE+F+ YY+VRLG ++     E+   +G            S+G    
Sbjct: 1   MTGADEPSITRWTFEDFEVYYEVRLGIRREPGGDEDGDGDGGGGRGYAPLGSGSAGSTRP 60

Query: 50  GNSHGKVTSDRAIYDQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLS 109
             +H    +D A+++QF+   +     NG    G    P+KSLLP FESAEMR LAE+L 
Sbjct: 61  SAAHANGGADLAVFEQFERLERKVELRNGAIEAG---PPQKSLLPSFESAEMRNLAETLL 117

Query: 110 RDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFT-GLLSPWKGILLFGPPGTGK 168
           RDIIRGSP+VKWESIKGLENAKRLLKEAVVMPIKYPK      ++  + I  +      +
Sbjct: 118 RDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKVLQRSAITLERYIAFWSTRNRKE 177

Query: 169 TMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIIS 228
           TMLAKAVATEC TTFFNISASSIVSKWRGDSEKLVKVLFELARHHAP+TIFLDEIDAIIS
Sbjct: 178 TMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIIS 237

Query: 229 QRGEGRSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR-NQK 287
           QRGE RSEHEASRRLKTELLIQMDGL +TD+LVFVLAATNLPWELDAAMLRRLEKR    
Sbjct: 238 QRGEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKRILVP 297

Query: 288 QEEQCLRNSFLCSLMRN-----RCP---MIYWWTGQKDTQARIFAYFVKKQQCSH*DA** 339
             EQ  R++    L+ +       P   ++    G   +  R+       Q      +  
Sbjct: 298 LPEQEARHAMFEELLPSVPGTMNIPYDVLVEKTEGYSGSDIRLVCKEAAMQPLRRLMS-- 355

Query: 340 HNLNKNQMWCPK-KLPKVGPVVPEDVEAALRNTRPSAHLLAHKYDTFNADYGSQIL 394
             L   Q   P+ +LP+VGPV  ED+E ALRNTRPSAHL  H+Y+ FN DYGS +L
Sbjct: 356 -VLEGRQEEVPEDELPEVGPVTTEDIELALRNTRPSAHLHVHRYEKFNQDYGSHVL 410


>ref|NP_112593.1| hypothetical protein LOC83473 [Homo sapiens]
           gi|34190544|gb|AAH34999.2| Similar to mouse
           4933439B08Rik protein [Homo sapiens]
          Length = 466

 Score =  286 bits (732), Expect = 8e-76
 Identities = 142/203 (69%), Positives = 172/203 (83%), Gaps = 6/203 (2%)

Query: 88  PKKSLLPPFES-----AEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPI 142
           P + LL P  +     +EMR LA  +SRDI   +PN+KW  I GL+ AK+L+KEAVV PI
Sbjct: 143 PSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPI 202

Query: 143 KYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKL 202
           +YP+ FTG+LSPWKG+LL+GPPGTGKT+LAKAVATEC TTFFNISAS+IVSKWRGDSEKL
Sbjct: 203 RYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKL 262

Query: 203 VKVLFELARHHAPATIFLDEIDAIISQRGEGR-SEHEASRRLKTELLIQMDGLARTDELV 261
           V+VLFELAR+HAP+TIFLDE+++++SQRG     EHE S R+KTELL+QMDGLAR+++LV
Sbjct: 263 VRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLV 322

Query: 262 FVLAATNLPWELDAAMLRRLEKR 284
           FVLAA+NLPWELD AMLRRLEKR
Sbjct: 323 FVLAASNLPWELDCAMLRRLEKR 345


>ref|XP_547587.1| PREDICTED: similar to RIKEN cDNA 3110023G01 [Canis familiaris]
          Length = 567

 Score =  274 bits (701), Expect = 3e-72
 Identities = 131/176 (74%), Positives = 159/176 (89%), Gaps = 1/176 (0%)

Query: 110 RDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKT 169
           +DI   +PN+KW+ I GL+ AK+L+KEAVV PI+YP+ FTG+LSPWKG+LL+GPPGTGKT
Sbjct: 281 KDIYLHNPNIKWDDIIGLDTAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKT 340

Query: 170 MLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQ 229
           +LAKAVATEC TTFFNISAS+IVSKWRGDSEKLV+VLFELAR+HAP+TIFLDE+++++SQ
Sbjct: 341 LLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQ 400

Query: 230 RGEG-RSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKR 284
           RG     EHE S R+KTELL+QMDGLAR+++LVFVLAA+NLPWELD AMLRRLEKR
Sbjct: 401 RGTAPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLEKR 456


>ref|NP_081997.1| hypothetical protein LOC71206 [Mus musculus]
           gi|12856210|dbj|BAB30604.1| unnamed protein product [Mus
           musculus]
          Length = 409

 Score =  267 bits (682), Expect = 5e-70
 Identities = 133/194 (68%), Positives = 163/194 (83%), Gaps = 6/194 (3%)

Query: 88  PKKSLLPPFES-----AEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPI 142
           P + LL P  +     +EMR LA  +SRDI   +PN+KW  I GL+ AK+L+KEAVV PI
Sbjct: 216 PSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPI 275

Query: 143 KYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKL 202
           +YP+ FTG+LSPWKG+LL+GPPGTGKT+LAKAVATEC TTFFNISAS+IVSKWRGDSEKL
Sbjct: 276 RYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKL 335

Query: 203 VKVLFELARHHAPATIFLDEIDAIISQRG-EGRSEHEASRRLKTELLIQMDGLARTDELV 261
           V+VLFELAR+HAP+TIFLDE+++++SQRG     EHE S R+KTELL+QMDGLAR+++LV
Sbjct: 336 VRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLV 395

Query: 262 FVLAATNLPWELDA 275
           FVLAA+NLPWE DA
Sbjct: 396 FVLAASNLPWEGDA 409


>ref|XP_225707.3| PREDICTED: similar to RIKEN cDNA 3110023G01 [Rattus norvegicus]
          Length = 526

 Score =  263 bits (671), Expect = 9e-69
 Identities = 130/190 (68%), Positives = 160/190 (83%), Gaps = 6/190 (3%)

Query: 88  PKKSLLPPFES-----AEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPI 142
           P + LL P  +     +EMR LA  +SRDI   +PN+KW  I GL+ AK+L+KEAVV PI
Sbjct: 337 PSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPI 396

Query: 143 KYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKL 202
           +YP+ FTG+LSPWKG+LL+GPPGTGKT+LAKAVATEC TTFFNISAS+IVSKWRGDSEKL
Sbjct: 397 RYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKL 456

Query: 203 VKVLFELARHHAPATIFLDEIDAIISQRG-EGRSEHEASRRLKTELLIQMDGLARTDELV 261
           V+VLFELAR+HAP+TIFLDE+++++SQRG     EHE S R+KTELL+QMDGLAR+++LV
Sbjct: 457 VRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGLARSEDLV 516

Query: 262 FVLAATNLPW 271
           FVLAA+NLPW
Sbjct: 517 FVLAASNLPW 526


>ref|XP_414699.1| PREDICTED: similar to RIKEN cDNA 4933439B08 [Gallus gallus]
          Length = 448

 Score =  259 bits (662), Expect = 1e-67
 Identities = 124/162 (76%), Positives = 148/162 (90%), Gaps = 1/162 (0%)

Query: 111 DIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTM 170
           DI   +PNVKW+ I GL+ AKRL+KEAVV PI+YP+ FTG+LSPWKG+LL+GPPGTGKT+
Sbjct: 287 DIYLHNPNVKWDDIIGLDAAKRLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTL 346

Query: 171 LAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQR 230
           LAKAVATECNTTFFNISAS+IVSKWRGDSEKLV+VLFELAR+HAP+TIFLDE+++++SQR
Sbjct: 347 LAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR 406

Query: 231 GE-GRSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPW 271
           G     EHE SRR+KTELL+QMDGLAR+D+LVFVLAA+NLPW
Sbjct: 407 GTISGGEHEGSRRMKTELLVQMDGLARSDDLVFVLAASNLPW 448


>ref|NP_999733.1| katanin p60 [Strongylocentrotus purpuratus]
           gi|3098603|gb|AAC15706.1| katanin p60 subunit
           [Strongylocentrotus purpuratus]
           gi|60390159|sp|O61577|KTNA1_STRPU Katanin p60
           ATPase-containing subunit (Katanin p60 subunit) (p60
           katanin)
          Length = 516

 Score =  242 bits (617), Expect = 2e-62
 Identities = 118/189 (62%), Positives = 153/189 (80%), Gaps = 7/189 (3%)

Query: 102 RTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLF 161
           + L E+L RDI++ +PNV W  I GL  AKRLL+EAVV+P+  P YF G+  PWKG+L+ 
Sbjct: 214 KDLVENLERDIVQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFKGIRRPWKGVLMV 273

Query: 162 GPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLD 221
           GPPGTGKTMLAKAVATEC TTFFN+S++S+ SK+ G+SEKLV++LFE+AR +AP+TIF+D
Sbjct: 274 GPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFID 333

Query: 222 EIDAIISQRGEGRSEHEASRRLKTELLIQMDGLA------RTDELVFVLAATNLPWELDA 275
           EID+I S+RG G SEHEASRR+K+ELLIQMDG++       + ++V VLAATN PW++D 
Sbjct: 334 EIDSICSKRGTG-SEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDE 392

Query: 276 AMLRRLEKR 284
           A+ RRLEKR
Sbjct: 393 ALRRRLEKR 401


>emb|CAG07322.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 486

 Score =  240 bits (613), Expect = 5e-62
 Identities = 125/233 (53%), Positives = 165/233 (70%), Gaps = 14/233 (6%)

Query: 65  QFQSQGQNPTHTNGFGPNGVDEKPKKSLLPP-------FESAEMRT-LAESLSRDIIRGS 116
           Q  ++ + P   +  G    DEK KK    P       F+ A   + L + L RDI+  +
Sbjct: 140 QTNAKAERPGLKDARGVRAKDEKGKKGASEPGDGELKKFDGAGHDSDLVDLLERDIVSRN 199

Query: 117 PNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 176
           PNV W+ I  LE+AK+LL+EAVV+P+  P +F G+  PWKG+L+ GPPGTGKTMLAKAVA
Sbjct: 200 PNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVA 259

Query: 177 TECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEGRSE 236
           TEC TTFFN+S+S++ SK+RG+SEKLV+VLFE+AR +AP TIF+DEID+I S+RG    E
Sbjct: 260 TECGTTFFNVSSSTLTSKYRGESEKLVRVLFEMARFYAPTTIFIDEIDSICSRRGTS-DE 318

Query: 237 HEASRRLKTELLIQMDGLART-----DELVFVLAATNLPWELDAAMLRRLEKR 284
           HEASRR+K+E L+QMDG+  T      ++V VLAATN PW++D A+ RRLEKR
Sbjct: 319 HEASRRVKSEFLVQMDGMGNTPDEDPSKMVMVLAATNFPWDIDEALRRRLEKR 371


>gb|AAP92128.1| putative ATPase ATP1 [Oryza sativa (japonica cultivar-group)]
           gi|34911210|ref|NP_916952.1| putative CAD ATPase [Oryza
           sativa (japonica cultivar-group)]
           gi|19386661|dbj|BAB86043.1| putative katanin [Oryza
           sativa (japonica cultivar-group)]
           gi|21644706|dbj|BAC01262.1| putative katanin [Oryza
           sativa (japonica cultivar-group)]
          Length = 519

 Score =  240 bits (612), Expect = 6e-62
 Identities = 125/259 (48%), Positives = 173/259 (66%), Gaps = 27/259 (10%)

Query: 33  NGENAVSNGNSSGIASNGNSHGKVTSDRAIYDQFQSQGQNPTHTNGFGPNGVDEKPKKSL 92
           NG    S   SS  +S G   GK +S +A  D   S                D +  KS 
Sbjct: 165 NGSKGNSGARSSTASSTGGRKGKSSSSKA--DSVSS----------------DAEEGKSK 206

Query: 93  LPPFESAEMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLL 152
              +E  +M  LA  L RD++  +P V+W+ + GL  AKRLL+EAVV+P+  P+YF G+ 
Sbjct: 207 KGQYEGPDM-DLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIR 265

Query: 153 SPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARH 212
            PWKG+L+FGPPGTGKT+LAKAVATEC TTFFN+S++++ SKWRG+SE++V+ LF+LAR 
Sbjct: 266 RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARF 325

Query: 213 HAPATIFLDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLARTD-------ELVFVLA 265
           +AP+TIF+DEID++ + RG    EHE+SRR+K+ELL+Q+DG+  +        ++V VLA
Sbjct: 326 YAPSTIFIDEIDSLCTSRG-ASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLA 384

Query: 266 ATNLPWELDAAMLRRLEKR 284
           ATN PW++D A+ RRLEKR
Sbjct: 385 ATNFPWDIDEALRRRLEKR 403


>ref|XP_543146.1| PREDICTED: similar to katanin p60 subunit A-like 1 [Canis
           familiaris]
          Length = 582

 Score =  239 bits (610), Expect = 1e-61
 Identities = 123/234 (52%), Positives = 170/234 (72%), Gaps = 18/234 (7%)

Query: 68  SQGQNPTHTNG--FGPNGVDEKPKKSL--------LPPFESAEM-RTLAESLSRDIIRGS 116
           S+G+ P+ +    +   G D+K +K++        +P F+ A   + L E+L RDI+  +
Sbjct: 235 SKGEKPSTSRDKDYRARGRDDKGRKNMHDGASDGEIPKFDGAGYDKDLVEALERDIVSRN 294

Query: 117 PNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 176
           P++ W+ I  LE AK+LL+EAVV+P+  P +F G+  PWKG+L+ GPPGTGKTMLAKAVA
Sbjct: 295 PSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVA 354

Query: 177 TECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEGRSE 236
           TEC TTFFN+S+S++ SK+RG+SEKLV++LFE+AR +AP TIF+DEID+I S+RG    E
Sbjct: 355 TECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS-DE 413

Query: 237 HEASRRLKTELLIQMDGLART------DELVFVLAATNLPWELDAAMLRRLEKR 284
           HEASRR+K+ELLIQMDG+          ++V VLAATN PW++D A+ RRLEKR
Sbjct: 414 HEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKR 467


>gb|AAD53310.1| katanin p60 [Xenopus laevis] gi|60390218|sp|Q9PUL2|KTNA1_XENLA
           Katanin p60 ATPase-containing subunit (Katanin p60
           subunit) (p60 katanin)
          Length = 486

 Score =  239 bits (610), Expect = 1e-61
 Identities = 130/263 (49%), Positives = 175/263 (66%), Gaps = 33/263 (12%)

Query: 64  DQFQSQGQNPTHTNGFGPNGVDEKP------KKSLLPPFESAEM--------------RT 103
           ++F +  + P   +    N V  KP      K +L+    SA++              + 
Sbjct: 128 NRFSAAAKGPNLPSARNANNVKMKPVRAREKKDALIKNKSSADVSETEVKRFDGSGYDKD 187

Query: 104 LAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGP 163
           L E+L RDII  +PN++W+ I  LE AK+LLKEAVV+P+  P++F G+  PWKG+L+ GP
Sbjct: 188 LIEALERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGP 247

Query: 164 PGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEI 223
           PGTGKT+LAKAVATEC TTFFNIS+S++ SK+RG+SEKLV++LFE+AR +AP TIF+DEI
Sbjct: 248 PGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEI 307

Query: 224 DAIISQRGEGRSEHEASRRLKTELLIQMDGLARTDE------LVFVLAATNLPWELDAAM 277
           D+I S+RG    EHEASRR+K ELL+QMDG+    E      +V VLAATN PW++D A+
Sbjct: 308 DSICSRRGTS-EEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEAL 366

Query: 278 LRRLEKR------NQKQEEQCLR 294
            RRLEKR      + K  E+ LR
Sbjct: 367 RRRLEKRIYIPLPSAKGREELLR 389


>ref|XP_321284.2| ENSANGP00000018492 [Anopheles gambiae str. PEST]
           gi|55233566|gb|EAA01173.2| ENSANGP00000018492 [Anopheles
           gambiae str. PEST]
          Length = 492

 Score =  239 bits (609), Expect = 1e-61
 Identities = 137/283 (48%), Positives = 184/283 (64%), Gaps = 27/283 (9%)

Query: 9   PTRWSFEEFKKYYDVRLGRKKLVENGENAVSNGNSSGI-----ASNGNSHGKVTSDRAIY 63
           P RW     +     R  R   V  G      G S+G      A+NGN  G+      + 
Sbjct: 115 PIRWPGRRRR-----RTDRSGRVGPGPRYAPAGPSAGAPGASDATNGN--GEKGDKEKLG 167

Query: 64  DQFQSQGQNPTHTNGFGPNGVDEKPKKSLLPPFESAEMRTLAESLSRDIIRGSPNVKWES 123
           D    +G N     G  P  V+ K       P   A++  L + L RDI++ +PN+ W+ 
Sbjct: 168 DD--EEGNN----GGDTPEEVERK-----FEPASHADV-DLVDMLERDILQKNPNIHWDD 215

Query: 124 IKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTF 183
           I  L  AKRLL+EAVV+P+  P YF G+  PWKG+L+ GPPGTGKTMLAKAVATEC TTF
Sbjct: 216 IADLHEAKRLLEEAVVLPMWMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTF 275

Query: 184 FNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLDEIDAIISQRGEGRSEHEASRRL 243
           FN+S+S++ SK+RG+SEKLV++LFE+AR +AP+TIF+DEID++ S+RG   SEHEASRR+
Sbjct: 276 FNVSSSTLTSKYRGESEKLVRLLFEMARFYAPSTIFIDEIDSLCSRRG-SESEHEASRRV 334

Query: 244 KTELLIQMDGLARTD--ELVFVLAATNLPWELDAAMLRRLEKR 284
           K+ELL+QMDG++  +  ++V VLAATN PW++D A+ RRLEKR
Sbjct: 335 KSELLVQMDGVSNDEATKIVMVLAATNFPWDIDEALRRRLEKR 377


>emb|CAI16431.1| katanin p60 (ATPase-containing) subunit A 1 [Homo sapiens]
           gi|56417804|emb|CAI19505.1| katanin p60
           (ATPase-containing) subunit A 1 [Homo sapiens]
           gi|60390161|sp|O75449|KTNA1_HUMAN Katanin p60
           ATPase-containing subunit A1 (Katanin p60 subunit A1)
           (p60 katanin) gi|3283072|gb|AAC25114.1| p60 katanin
           [Homo sapiens] gi|5901990|ref|NP_008975.1| katanin p60
           subunit A 1 [Homo sapiens]
          Length = 491

 Score =  239 bits (609), Expect = 1e-61
 Identities = 121/207 (58%), Positives = 158/207 (75%), Gaps = 13/207 (6%)

Query: 102 RTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLF 161
           + L E+L RDII  +PNV+W+ I  L  AK+LLKEAVV+P+  P++F G+  PWKG+L+ 
Sbjct: 189 KDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMV 248

Query: 162 GPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIFLD 221
           GPPGTGKT+LAKAVATEC TTFFN+S+S++ SK+RG+SEKLV++LFE+AR ++PATIF+D
Sbjct: 249 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFID 308

Query: 222 EIDAIISQRGEGRSEHEASRRLKTELLIQMDGLARTDE------LVFVLAATNLPWELDA 275
           EID+I S+RG    EHEASRR+K ELL+QMDG+  T E      +V VLAATN PW++D 
Sbjct: 309 EIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDE 367

Query: 276 AMLRRLEKR------NQKQEEQCLRNS 296
           A+ RRLEKR      + K  E+ LR S
Sbjct: 368 ALRRRLEKRIYIPLPSAKGREELLRIS 394


>emb|CAI20705.1| novel protein similar to vertebrate katanin p60 (ATPase-containing)
           subunit A 1 (KATNA1) [Danio rerio]
           gi|66472538|ref|NP_001018440.1| hypothetical protein
           LOC553631 [Danio rerio] gi|63101878|gb|AAH95321.1|
           Hypothetical protein LOC553631 [Danio rerio]
          Length = 485

 Score =  239 bits (609), Expect = 1e-61
 Identities = 117/190 (61%), Positives = 151/190 (78%), Gaps = 6/190 (3%)

Query: 100 EMRTLAESLSRDIIRGSPNVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGIL 159
           E + L ++L RDII  +PNV W+ I  LE AK+LLKEAVV+P+  P++F G+  PWKG+L
Sbjct: 182 EDKDLIDALERDIISQNPNVTWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVL 241

Query: 160 LFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPATIF 219
           + GPPGTGKT+LAKAVATEC TTFFN+S+S++ SK+RG+SEKLV++LFE+AR +AP TIF
Sbjct: 242 MVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIF 301

Query: 220 LDEIDAIISQRGEGRSEHEASRRLKTELLIQMDGLARTDE-----LVFVLAATNLPWELD 274
           +DEID+I S+RG    EHEASRR+K ELL+QMDG+  T E     +V VLAATN PW++D
Sbjct: 302 IDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDID 360

Query: 275 AAMLRRLEKR 284
            A+ RRLEKR
Sbjct: 361 EALRRRLEKR 370


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.321    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 678,639,580
Number of Sequences: 2540612
Number of extensions: 28183824
Number of successful extensions: 107443
Number of sequences better than 10.0: 4295
Number of HSP's better than 10.0 without gapping: 2689
Number of HSP's successfully gapped in prelim test: 1607
Number of HSP's that attempted gapping in prelim test: 99679
Number of HSP's gapped (non-prelim): 5488
length of query: 394
length of database: 863,360,394
effective HSP length: 130
effective length of query: 264
effective length of database: 533,080,834
effective search space: 140733340176
effective search space used: 140733340176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)