BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146631.2 + phase: 0 /pseudo
         (953 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAU10683.1| putative polyprotein [Oryza sativa (japonica cult...    39  0.63

>gb|AAU10683.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
          Length = 1638

 Score = 39.3 bits (90), Expect = 0.63
 Identities = 18/34 (52%), Positives = 23/34 (66%)

Query: 666  KRPEVHFKILEEFARCIGFKVEVEFGLSSANRWS 699
            KR  +HFK+L E AR IG  V+ +  L SA+RWS
Sbjct: 1345 KREPIHFKVLAEIARGIGNPVKFQHSLPSADRWS 1378


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.373    0.168    0.680 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,232,496,861
Number of Sequences: 2540612
Number of extensions: 40303070
Number of successful extensions: 143213
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143212
Number of HSP's gapped (non-prelim): 1
length of query: 953
length of database: 863,360,394
effective HSP length: 138
effective length of query: 815
effective length of database: 512,755,938
effective search space: 417896089470
effective search space used: 417896089470
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (22.0 bits)
S2: 80 (35.4 bits)