BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146570.6 + phase: 0
(101 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175330.1| expressed protein [Arabidopsis thaliana] gi|463... 65 4e-10
dbj|BAD45365.1| hypothetical protein [Oryza sativa (japonica cul... 61 6e-09
ref|XP_467434.1| unknown protein [Oryza sativa (japonica cultiva... 60 1e-08
dbj|BAB02214.1| unnamed protein product [Arabidopsis thaliana] g... 59 3e-08
ref|NP_917580.1| P0704D04.7 [Oryza sativa (japonica cultivar-gro... 58 7e-08
dbj|BAD53047.1| hypothetical protein [Oryza sativa (japonica cul... 58 7e-08
ref|NP_908426.1| unknown protein [Oryza sativa (japonica cultiva... 57 1e-07
ref|XP_464594.1| hypothetical protein [Oryza sativa (japonica cu... 44 7e-04
ref|NP_918803.1| B1096D03.21 [Oryza sativa (japonica cultivar-gr... 44 0.001
dbj|BAD68489.1| hypothetical protein [Oryza sativa (japonica cul... 44 0.001
gb|AAX55098.1| hypothetical protein At1g71740 [Arabidopsis thali... 39 0.024
gb|AAM48026.1| unknown protein [Arabidopsis thaliana] gi|1825297... 37 0.16
gb|AAX55195.1| hypothetical protein At5g27020 [Arabidopsis thali... 36 0.20
ref|XP_465291.1| putative pattern formation protein GNOM [Oryza ... 35 0.35
dbj|BAD28850.1| unknown protein [Oryza sativa (japonica cultivar... 34 0.77
ref|ZP_00518978.1| similar to Uncharacterized conserved protein ... 33 1.3
ref|NP_704603.1| developmental protein, putative [Plasmodium fal... 33 1.3
ref|NP_700804.1| hypothetical protein PF10_0331 [Plasmodium falc... 33 1.3
emb|CAH77700.1| developmental protein, putative [Plasmodium chab... 33 2.3
emb|CAH78079.1| ABC transporter, putative [Plasmodium chabaudi] 32 2.9
>ref|NP_175330.1| expressed protein [Arabidopsis thaliana] gi|46359837|gb|AAS88782.1|
At1g49000 [Arabidopsis thaliana]
gi|45476547|gb|AAS65939.1| At1g49000 [Arabidopsis
thaliana] gi|7770334|gb|AAF69704.1| F27J15.21
[Arabidopsis thaliana]
Length = 156
Score = 65.1 bits (157), Expect = 4e-10
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 16 SLKTKKLEELSTSSKNIIKKIYKAIHCKILKMKKQEDDKCLWKKTILMGEKCQPLEFPGA 75
S+ + + +EL T+ N + + + K E++ LW++ ILMG KC+PL+F G
Sbjct: 67 SMSSPRPKELFTTLSNKAMTMVRRKNPPEEKATAMEEEHGLWQREILMGGKCEPLDFSGV 126
Query: 76 IFYDSEGNQLSE-PPRTPRSSPSSSF 100
I+YDS G L+E PPR+PR +P S+
Sbjct: 127 IYYDSNGRLLNEVPPRSPRGTPLPSY 152
>dbj|BAD45365.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 171
Score = 61.2 bits (147), Expect = 6e-09
Identities = 26/51 (50%), Positives = 38/51 (73%), Gaps = 2/51 (3%)
Query: 48 KKQEDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSE--PPRTPRSSP 96
+++ D LW+K ILMGE+CQPL+F G I+YD++G +L+ PPR+P SP
Sbjct: 106 REEGDSGGLWRKEILMGERCQPLDFSGVIYYDADGRRLAHPPPPRSPMRSP 156
>ref|XP_467434.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|41052652|dbj|BAD07500.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 138
Score = 60.1 bits (144), Expect = 1e-08
Identities = 26/46 (56%), Positives = 35/46 (75%), Gaps = 2/46 (4%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEGNQLSE--PPRTPRSSPSSS 99
+W+K ILMGE+CQPL+F G I+YD+EG +L + PPR+P SP S
Sbjct: 79 VWRKEILMGERCQPLDFSGVIYYDAEGRRLEQPPPPRSPLRSPLPS 124
>dbj|BAB02214.1| unnamed protein product [Arabidopsis thaliana]
gi|15809742|gb|AAL06799.1| AT3g18560/K24M9_5
[Arabidopsis thaliana] gi|14190489|gb|AAK55725.1|
AT3g18560/K24M9_5 [Arabidopsis thaliana]
gi|18401929|ref|NP_566614.1| expressed protein
[Arabidopsis thaliana]
Length = 195
Score = 58.9 bits (141), Expect = 3e-08
Identities = 24/50 (48%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 47 MKKQEDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSE-PPRTPRSS 95
M++ E++ +W++ ILMG KC+PL++ G I+YD G+QL + PPR+PR+S
Sbjct: 124 MEEDEEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRAS 173
>ref|NP_917580.1| P0704D04.7 [Oryza sativa (japonica cultivar-group)]
Length = 135
Score = 57.8 bits (138), Expect = 7e-08
Identities = 24/44 (54%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPPRTPRSSPSSS 99
LW++ ILMGE+C+PL FPGAI YDS G +LS+ PR ++ P+++
Sbjct: 58 LWRRAILMGERCEPLSFPGAIHYDSRGRRLSQ-PRRAKAKPAAA 100
>dbj|BAD53047.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 505
Score = 57.8 bits (138), Expect = 7e-08
Identities = 24/44 (54%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPPRTPRSSPSSS 99
LW++ ILMGE+C+PL FPGAI YDS G +LS+ PR ++ P+++
Sbjct: 428 LWRRAILMGERCEPLSFPGAIHYDSRGRRLSQ-PRRAKAKPAAA 470
>ref|NP_908426.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|14587253|dbj|BAB61171.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|13486649|dbj|BAB39887.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 175
Score = 56.6 bits (135), Expect = 1e-07
Identities = 22/35 (62%), Positives = 31/35 (87%)
Query: 51 EDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQL 85
E+++ LW+KTI+MG+KC+PL+F G I YDS+GNQL
Sbjct: 121 EEEEALWRKTIMMGDKCRPLQFSGHIAYDSDGNQL 155
>ref|XP_464594.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|49387925|dbj|BAD25025.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 299
Score = 44.3 bits (103), Expect = 7e-04
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 55 CLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPPRTPRSS 95
C+W+K ILMG KCQ EF G I YD+ GN + P PR++
Sbjct: 97 CVWQKNILMGGKCQLPEFSGVINYDAAGN-IVAPSGRPRAA 136
>ref|NP_918803.1| B1096D03.21 [Oryza sativa (japonica cultivar-group)]
Length = 918
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 51 EDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPP 89
ED C +K ILM E+CQ L+F G I+YD G +L +PP
Sbjct: 858 EDGVC--RKEILMEERCQSLDFSGMIYYDVAGRRLEQPP 894
>dbj|BAD68489.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 138
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 51 EDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPP 89
ED C +K ILM E+CQ L+F G I+YD G +L +PP
Sbjct: 78 EDGVC--RKEILMEERCQSLDFSGMIYYDVAGRRLEQPP 114
>gb|AAX55098.1| hypothetical protein At1g71740 [Arabidopsis thaliana]
gi|15217551|ref|NP_177319.1| hypothetical protein
[Arabidopsis thaliana] gi|7239501|gb|AAF43227.1|
F14O23.12 [Arabidopsis thaliana] gi|25406118|pir||G96739
F14O23.12 [imported] - Arabidopsis thaliana
Length = 130
Score = 39.3 bits (90), Expect = 0.024
Identities = 16/27 (59%), Positives = 20/27 (73%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEG 82
LW+K ILMG KCQ +F G I YD++G
Sbjct: 88 LWQKNILMGGKCQLPDFSGVILYDADG 114
>gb|AAM48026.1| unknown protein [Arabidopsis thaliana] gi|18252977|gb|AAL62415.1|
unknown protein [Arabidopsis thaliana]
gi|22331082|ref|NP_188094.2| expressed protein
[Arabidopsis thaliana]
Length = 168
Score = 36.6 bits (83), Expect = 0.16
Identities = 17/43 (39%), Positives = 23/43 (52%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEPPRTPRSSPSS 98
+W++ ILMGEKC+ F G I YD G+ P + SS
Sbjct: 116 VWQRPILMGEKCELPRFSGLILYDECGHPRHHPQLQEKVKQSS 158
>gb|AAX55195.1| hypothetical protein At5g27020 [Arabidopsis thaliana]
gi|52354479|gb|AAU44560.1| hypothetical protein
AT5G27020 [Arabidopsis thaliana]
gi|15240429|ref|NP_198054.1| hypothetical protein
[Arabidopsis thaliana] gi|2191164|gb|AAB61050.1| weak
similarity to C. elegans transposase (TR:g1125840)
[Arabidopsis thaliana] gi|7485242|pir||T01777
hypothetical protein A_IG002P16.13 - Arabidopsis
thaliana
Length = 164
Score = 36.2 bits (82), Expect = 0.20
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 50 QEDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSEP 88
+E++ C KK ILMGE+C+P+ G + YD +G L EP
Sbjct: 130 EEEELC--KKRILMGERCKPMN--GVLQYDGDGILLPEP 164
>ref|XP_465291.1| putative pattern formation protein GNOM [Oryza sativa (japonica
cultivar-group)] gi|46390869|dbj|BAD16386.1| putative
pattern formation protein GNOM [Oryza sativa (japonica
cultivar-group)] gi|46390266|dbj|BAD15695.1| putative
pattern formation protein GNOM [Oryza sativa (japonica
cultivar-group)]
Length = 1424
Score = 35.4 bits (80), Expect = 0.35
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 2 IINKINKAIISYIISLKTKKLEELSTSSKNIIKKIYKAIHCKILKMKKQEDDKCLWKKTI 61
+++ I K + + +T+KL+E+ I + KA ++L ++ LW+ T
Sbjct: 1325 VLDMIEKLMKVKVRGRRTEKLQEVIPELLKNILLVLKAN--RVLSKTSTSEENSLWEATW 1382
Query: 62 LMGEKCQPLEFPGAIFYDSEGNQLSEPPRTPRSSPSSS 99
L K P P +F DSEG+ ++ + SP+ S
Sbjct: 1383 LQVNKIAPSLQP-EVFPDSEGDVATQSAKNKSDSPAQS 1419
>dbj|BAD28850.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 143
Score = 34.3 bits (77), Expect = 0.77
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 56 LWKKTILMGEKCQPLEFPGAIFYDSEG 82
+W++ +LMG KCQ F G I YD G
Sbjct: 89 IWQRKVLMGVKCQLPRFSGMILYDERG 115
>ref|ZP_00518978.1| similar to Uncharacterized conserved protein [Crocosphaera
watsonii WH 8501] gi|67852490|gb|EAM47931.1| similar to
Uncharacterized conserved protein [Crocosphaera
watsonii WH 8501]
Length = 335
Score = 33.5 bits (75), Expect = 1.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 47 MKKQEDDKCLWKKTILMGEKCQPLEFPGAIFYDSEGNQLSE 87
++K+ED K W + I G P P FYD +G+QL E
Sbjct: 18 VEKREDAKSSWGQDIKEGLSQSPKTIPPKYFYDDQGSQLFE 58
>ref|NP_704603.1| developmental protein, putative [Plasmodium falciparum 3D7]
gi|23504962|emb|CAD51746.1| developmental protein,
putative [Plasmodium falciparum 3D7]
Length = 195
Score = 33.5 bits (75), Expect = 1.3
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 4 NKINKAIISYIISLKTKKLEELSTSS----KNIIKKIYKAIHCKILKMKKQEDDKCLWKK 59
NKI+ + + LKTK+LE+LS S K +I + KAI +++ + +KC+ KK
Sbjct: 3 NKISTEDHIFRLKLKTKELEKLSQRSELEEKKLIGDVKKAIQAGKIELARLYAEKCIRKK 62
>ref|NP_700804.1| hypothetical protein PF10_0331 [Plasmodium falciparum 3D7]
gi|23495198|gb|AAN35528.1| hypothetical protein,
conserved [Plasmodium falciparum 3D7]
Length = 682
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/46 (32%), Positives = 30/46 (64%)
Query: 2 IINKINKAIISYIISLKTKKLEELSTSSKNIIKKIYKAIHCKILKM 47
+INKI + +IS++++L + +S++S N K I + +H KI ++
Sbjct: 200 VINKITEGLISFLVTLGVVPIIRVSSNSSNPSKMIAQKLHEKIYEL 245
>emb|CAH77700.1| developmental protein, putative [Plasmodium chabaudi]
Length = 195
Score = 32.7 bits (73), Expect = 2.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 4 NKINKAIISYIISLKTKKLEELSTSS----KNIIKKIYKAIHCKILKMKKQEDDKCLWKK 59
NK++ + + LKTK+LE+LS S K + + KAI + M + +KC+ KK
Sbjct: 3 NKLSTEDHIFRLKLKTKELEKLSNRSELEEKRFVMDVKKAIQAGKIDMARLYAEKCIRKK 62
>emb|CAH78079.1| ABC transporter, putative [Plasmodium chabaudi]
Length = 558
Score = 32.3 bits (72), Expect = 2.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 3 INKINKAIISYIISLKTKKLEELSTSSKNIIKKIYKAIH 41
IN+ K I SY+I + K EE+ +K+ ++KIY H
Sbjct: 396 INQDEKEIYSYLIKEEEKNKEEIKNMTKDKLEKIYNDFH 434
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,920,968
Number of Sequences: 2540612
Number of extensions: 6329264
Number of successful extensions: 14837
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 14813
Number of HSP's gapped (non-prelim): 39
length of query: 101
length of database: 863,360,394
effective HSP length: 77
effective length of query: 24
effective length of database: 667,733,270
effective search space: 16025598480
effective search space used: 16025598480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146570.6