BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146570.4 - phase: 0
(338 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67516.1| putative DNA-binding protein [Arabidopsis thalian... 315 2e-84
gb|AAM64450.1| putative HLH DNA-binding protein [Arabidopsis tha... 261 2e-68
ref|XP_482542.1| DNA-binding protein-like [Oryza sativa (japonic... 209 7e-53
dbj|BAD28357.1| DNA binding protein-like [Oryza sativa (japonica... 208 2e-52
dbj|BAC43635.1| putative bHLH transcription factor bHLH106 [Arab... 153 6e-36
gb|AAL69455.1| At2g41130/T3K9.10 [Arabidopsis thaliana] 153 6e-36
gb|AAP73859.1| putative DNA binding protein [Oryza sativa (japon... 152 2e-35
emb|CAC00740.1| putative HLH DNA binding protein [Arabidopsis th... 149 2e-34
ref|XP_493769.1| unnamed protein product [Oryza sativa (japonica... 137 5e-31
ref|NP_913364.1| P0665D10.15 [Oryza sativa (japonica cultivar-gr... 131 3e-29
gb|AAM10943.1| putative bHLH transcription factor [Arabidopsis t... 123 7e-27
ref|XP_475649.1| unknown protein [Oryza sativa (japonica cultiva... 115 2e-24
ref|XP_482961.1| bHLH protein family-like [Oryza sativa (japonic... 111 4e-23
dbj|BAD33952.1| bHLH-like protein [Oryza sativa (japonica cultiv... 100 5e-20
ref|NP_195520.2| bHLH family protein [Arabidopsis thaliana] 100 6e-20
emb|CAE12174.1| putative bHLH131 transcription factor [Arabidops... 100 6e-20
emb|CAB80472.1| hypothetical protein [Arabidopsis thaliana] gi|4... 91 4e-17
gb|AAP51779.1| putative bHLH transcription factor [Oryza sativa ... 70 9e-11
gb|AAM10932.1| putative bHLH transcription factor [Arabidopsis t... 68 4e-10
gb|AAM53310.1| transcription factor MYC7E, putative [Arabidopsis... 68 4e-10
>gb|AAM67516.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|18176098|gb|AAL59983.1| putative DNA-binding protein
[Arabidopsis thaliana] gi|18409132|ref|NP_564944.1|
basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana] gi|12324140|gb|AAG52041.1|
putative DNA-binding protein; 36199-34606 [Arabidopsis
thaliana] gi|12323209|gb|AAG51581.1| putative
DNA-binding protein [Arabidopsis thaliana]
gi|25404781|pir||H96712 probable DNA-binding protein
T6L1.1 [imported] - Arabidopsis thaliana
Length = 368
Score = 315 bits (806), Expect = 2e-84
Identities = 196/358 (54%), Positives = 239/358 (66%), Gaps = 46/358 (12%)
Query: 3 QEDQGQCSSQTINNFETYQQEQFLLQQQMMRQQNSDHHIFGGGRSMFPTAGGDHN----- 57
+E++ + SS+ +NN + YQ + F Q S HH S T G N
Sbjct: 8 EEEEEEDSSEAMNNIQNYQNDLFF------HQLISHHHHHHHDPSQSETLGASGNVGSGF 61
Query: 58 ------QVSPILQQTWSMQQLHHHHHPFNPHDPFVIPQQQASPYASLFNR---RVPSLQF 108
VSPI WS+ PF+ P AS Y S FNR LQF
Sbjct: 62 TIFSQDSVSPI----WSLPPPTSIQPPFDQFPP--PSSSPASFYGSFFNRSRAHHQGLQF 115
Query: 109 AYDHHAGS--------EHLRIISDTLQH--GSGSGPFGGFQGEVGKMSAQEIMEAKALAA 158
Y+ G+ E LRI+S+ L +GSGPFG Q E+GKM+AQEIM+AKALAA
Sbjct: 116 GYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFG-LQAELGKMTAQEIMDAKALAA 174
Query: 159 SKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSP 218
SKSHSEAERRRRERINNHLAKLRS+LP+TTKTDKASLLAEVIQHVKELKR+TS+I+ET+
Sbjct: 175 SKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNL 234
Query: 219 VPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRLRTLKADI 278
VPTE DELTV A ++E+ G +F+IKASLCC+DRSDLLP++IKTLKA+RL+TLKA+I
Sbjct: 235 VPTESDELTV-AFTEEEETGD--GRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEI 291
Query: 279 TTLGGRVKNVLFITGEED-----DHEYCISSIQEALKAVMEKS-VGDESASGSVKRQR 330
TT+GGRVKNVLF+TGEE + EYCI +I+EALKAVMEKS V + S+SG+ KRQR
Sbjct: 292 TTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQR 349
>gb|AAM64450.1| putative HLH DNA-binding protein [Arabidopsis thaliana]
gi|7939557|dbj|BAA95758.1| DNA-binding protein-like
[Arabidopsis thaliana] gi|18958020|gb|AAL79583.1|
AT3g25710/K13N2_1 [Arabidopsis thaliana]
gi|16604444|gb|AAL24228.1| AT3g25710/K13N2_1
[Arabidopsis thaliana] gi|15230869|ref|NP_189199.1|
basic helix-loop-helix (bHLH) family protein
[Arabidopsis thaliana]
Length = 344
Score = 261 bits (668), Expect = 2e-68
Identities = 160/320 (50%), Positives = 199/320 (62%), Gaps = 63/320 (19%)
Query: 71 QLHHHHHP---------FNPHDPFVIPQQQA--SPYASLFNRRVPSLQFAYDHHAG---- 115
Q H HHHP DP P S FNRR S ++D++ G
Sbjct: 22 QFHLHHHPQILPWSSTSLPSFDPLHFPSNPTRYSDPVHYFNRRASSSSSSFDYNDGFVSP 81
Query: 116 -------SEHLRIISDTLQHGSGSGPFGGFQGEV-GKMSAQEIMEAKALAASKSHSEAER 167
HLRI+S+ L G GF GE+ GK+SAQE+M+AKALAASKSHSEAER
Sbjct: 82 PPSMDHPQNHLRILSEALGPIMRRGSSFGFDGEIMGKLSAQEVMDAKALAASKSHSEAER 141
Query: 168 RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTECDELT 227
RRRERIN HLAKLRS+LP+TTKTDKASLLAEVIQH+KELKRQTS I +T VPTECD+LT
Sbjct: 142 RRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLT 201
Query: 228 VDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRLRTLKADITTLGGRVKN 287
VD++ +DE+ GN +I+AS CC DR+DL+ ++I LK+LRLRTLKA+I T+GGRVKN
Sbjct: 202 VDSSYNDEE----GN-LVIRASFCCQDRTDLMHDVINALKSLRLRTLKAEIATVGGRVKN 256
Query: 288 VLFITGEEDDHE------------------------YCISSIQEALKAVMEKSVG----- 318
+LF++ E DD E +SSI+EALKAV+EK V
Sbjct: 257 ILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDES 316
Query: 319 ------DESASGSVKRQRTN 332
++S+SG +KRQRT+
Sbjct: 317 NDNNNLEKSSSGGIKRQRTS 336
>ref|XP_482542.1| DNA-binding protein-like [Oryza sativa (japonica cultivar-group)]
gi|42409474|dbj|BAD09830.1| DNA-binding protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 345
Score = 209 bits (533), Expect = 7e-53
Identities = 126/241 (52%), Positives = 158/241 (65%), Gaps = 48/241 (19%)
Query: 132 SGPFGGFQGEVGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTD 191
SG G Q E+G+M+A+EIM+AKALAAS+SHSEAERRRR+RIN HLA+LRSLLP+TTKTD
Sbjct: 95 SGLLGTLQAELGRMTAKEIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTD 154
Query: 192 KASLLAEVIQHVKELKRQTSLIAE---------TSPV---PTECDELTVDAAADDEDYGS 239
KASLLAEVI+HVKELKRQTS + E +PV PTE DEL VDAAAD+
Sbjct: 155 KASLLAEVIEHVKELKRQTSAMMEDGAAGGEAAAAPVVLLPTEDDELEVDAAADE----- 209
Query: 240 NGNKFIIKASLCCDDRSDLLPELIKTLKALRLRTLKADITTLGGRVKNVLFI-------- 291
G + + +ASLCC+DR+DL+P + + L ALRLR +A+I TLGGRV++VL I
Sbjct: 210 -GGRLVARASLCCEDRADLIPGIARALAALRLRARRAEIATLGGRVRSVLLIAAVEEEDP 268
Query: 292 --TGEEDDHEY------------CISSIQEALKAVMEK--------SVGDESASGSVKRQ 329
G +DD E+ ++SI EAL+ VM + S G GS+KRQ
Sbjct: 269 DEAGNDDDGEHGYGVAASHRRHELVASIHEALRGVMNRKAASSDTSSSGAGGGGGSIKRQ 328
Query: 330 R 330
R
Sbjct: 329 R 329
>dbj|BAD28357.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 363
Score = 208 bits (529), Expect = 2e-52
Identities = 127/281 (45%), Positives = 164/281 (58%), Gaps = 86/281 (30%)
Query: 132 SGPFGGFQGEVGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTD 191
SG G Q E+G+++A+EIM+AKALAAS+SHSEAERRRR+RIN HLA+LRSLLP+TTKTD
Sbjct: 80 SGLLGSLQAELGRVTAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTD 139
Query: 192 KASLLAEVIQHVKELKRQTSLIAETSP--------------------------VPTECDE 225
KASLLAEVI+HVKELKRQT+ IA + +PTE DE
Sbjct: 140 KASLLAEVIEHVKELKRQTTAIAAAAAAGDYHGNDEDDDDAVVGRRSAAAQQLLPTEADE 199
Query: 226 LTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRLRTLKADITTLGGRV 285
L VDAA D E K +++ASLCC+DR DL+P++ + L ALRLR +A+ITTLGGRV
Sbjct: 200 LAVDAAVDAE------GKLVVRASLCCEDRPDLIPDIARALAALRLRARRAEITTLGGRV 253
Query: 286 KNVLFITGEEDDHEY----------------------------------------CISSI 305
++VL IT +E ++ CI+++
Sbjct: 254 RSVLLITADEQQQQHCDDVDDDEDGHRLLLRHGIDGAGAAADDDDECAASHRRHECIATV 313
Query: 306 QEALKAVMEK----SVGDESAS----------GSVKRQRTN 332
QEAL+ VM++ S GD S+S GS+KRQR N
Sbjct: 314 QEALRGVMDRRAAASSGDTSSSGGAVVAGGGGGSIKRQRMN 354
>dbj|BAC43635.1| putative bHLH transcription factor bHLH106 [Arabidopsis thaliana]
gi|3402704|gb|AAD11998.1| unknown protein [Arabidopsis
thaliana] gi|15226839|ref|NP_181646.1| basic
helix-loop-helix (bHLH) family protein [Arabidopsis
thaliana] gi|7487617|pir||T02106 hypothetical protein
At2g41130 [imported] - Arabidopsis thaliana
Length = 253
Score = 153 bits (387), Expect = 6e-36
Identities = 83/178 (46%), Positives = 131/178 (72%), Gaps = 11/178 (6%)
Query: 142 VGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQ 201
+G+ AQ+ +ALAA ++H EAERRRRERIN+HL KLR++L +KTDKA+LLA+V+Q
Sbjct: 55 IGETMAQD----RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQ 110
Query: 202 HVKELKRQTSLIAETSP--VPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLL 259
V+ELK+QT +++ +P+E DE++V DY ++G+ I KASLCC+DRSDLL
Sbjct: 111 RVRELKQQTLETSDSDQTLLPSETDEISV---LHFGDYSNDGH-IIFKASLCCEDRSDLL 166
Query: 260 PELIKTLKALRLRTLKADITTLGGRVKNVLFITGEEDDHEY-CISSIQEALKAVMEKS 316
P+L++ LK+L ++TL+A++ T+GGR ++VL + +++ H + +Q ALK+++E+S
Sbjct: 167 PDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERS 224
>gb|AAL69455.1| At2g41130/T3K9.10 [Arabidopsis thaliana]
Length = 245
Score = 153 bits (387), Expect = 6e-36
Identities = 83/178 (46%), Positives = 131/178 (72%), Gaps = 11/178 (6%)
Query: 142 VGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQ 201
+G+ AQ+ +ALAA ++H EAERRRRERIN+HL KLR++L +KTDKA+LLA+V+Q
Sbjct: 47 IGETMAQD----RALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQ 102
Query: 202 HVKELKRQTSLIAETSP--VPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLL 259
V+ELK+QT +++ +P+E DE++V DY ++G+ I KASLCC+DRSDLL
Sbjct: 103 RVRELKQQTLETSDSDQTLLPSETDEISV---LHFGDYSNDGH-IIFKASLCCEDRSDLL 158
Query: 260 PELIKTLKALRLRTLKADITTLGGRVKNVLFITGEEDDHEY-CISSIQEALKAVMEKS 316
P+L++ LK+L ++TL+A++ T+GGR ++VL + +++ H + +Q ALK+++E+S
Sbjct: 159 PDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERS 216
>gb|AAP73859.1| putative DNA binding protein [Oryza sativa (japonica
cultivar-group)] gi|50919303|ref|XP_470048.1| putative
DNA binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 268
Score = 152 bits (383), Expect = 2e-35
Identities = 90/213 (42%), Positives = 135/213 (63%), Gaps = 24/213 (11%)
Query: 146 SAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKE 205
+A + +ALAAS++H EAE+RRRERI +HL +LR++L K DKASLLA+ ++ V++
Sbjct: 55 AAAAAAQDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRD 114
Query: 206 LKRQTSLIAETSPV---PTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPEL 262
LK++ + I E +P PTE DE+ V A+ G+ G + +AS+CCDDR DLLPEL
Sbjct: 115 LKQRMAGIGEAAPAHLFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCDLLPEL 174
Query: 263 IKTLKALRLRTLKADITTLGGRVKNVLFIT-----------GEEDDHEYCISS------I 305
I+TL+ALRLRTL+A++ TLGGRV+NVL + G++D Y S +
Sbjct: 175 IETLRALRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDRAGYSAVSNDGGDFL 234
Query: 306 QEALKAVMEKSVGDESASGSVKRQRTNIISISN 338
+EAL+A++E+ A+ + +R ++S N
Sbjct: 235 KEALRALVER----PGAAAGDRPKRRRVVSDMN 263
>emb|CAC00740.1| putative HLH DNA binding protein [Arabidopsis thaliana]
gi|15229004|ref|NP_191236.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
gi|11292134|pir||T51265 probable HLH DNA binding protein
- Arabidopsis thaliana
Length = 230
Score = 149 bits (375), Expect = 2e-34
Identities = 83/191 (43%), Positives = 128/191 (66%), Gaps = 17/191 (8%)
Query: 150 IMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQ 209
+ E KALA+ ++H EAER+RR RIN+HL KLR LL +KTDK++LLA+V+Q VKELK+Q
Sbjct: 37 VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96
Query: 210 TSLIAETSPVPTECDELTV----DAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKT 265
T I + + +P+E DE++V D + D+ + I K S CC+DR +LL +L++T
Sbjct: 97 TLEITDET-IPSETDEISVLNIEDCSRGDD------RRIIFKVSFCCEDRPELLKDLMET 149
Query: 266 LKALRLRTLKADITTLGGRVKNVLFITGEEDDH-EYCISSIQEALKAVMEKS-----VGD 319
LK+L++ TL AD+TT+GGR +NVL + +++ H ++ +Q ALK+++E+S VG
Sbjct: 150 LKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSKSVMVGH 209
Query: 320 ESASGSVKRQR 330
G + +R
Sbjct: 210 GGGGGEERLKR 220
>ref|XP_493769.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9757687|dbj|BAB08206.1| ESTs
C26093(C11622),AU090634(C12429) correspond to a region
of the predicted gene.~Similar to Arabidopsis thaliana
chromosome II BAC T3K9; hypothetical protein (AC004261)
[Oryza sativa (japonica cultivar-group)]
Length = 258
Score = 137 bits (345), Expect = 5e-31
Identities = 83/195 (42%), Positives = 116/195 (58%), Gaps = 13/195 (6%)
Query: 146 SAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKE 205
S + EA+AL K HSEAERRRRERIN HL LR ++P T + DKA+LLA V+ VK+
Sbjct: 56 SGRSATEARAL---KIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKD 112
Query: 206 LKRQTSLIAETSPVPTECDELTV-----DAAADDEDYGSNGNKFIIKASLCCDDRSDLLP 260
LKR+ S I + +P+P E +E+++ DAA N IKAS+ CDDR DL+
Sbjct: 113 LKRKASEITQRTPLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIA 172
Query: 261 ELIKTLKALRLRTLKADITTLGGRVKNVLFITGEED-DHEYCISSIQEALKAVMEKSVGD 319
+ LRLRT++A++T+LGGRV++V + EE + S++EA++ + K
Sbjct: 173 GITHAFHGLRLRTVRAEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAKVASP 232
Query: 320 ESASGS----VKRQR 330
E GS KRQR
Sbjct: 233 ELVYGSSHFQSKRQR 247
>ref|NP_913364.1| P0665D10.15 [Oryza sativa (japonica cultivar-group)]
gi|21327944|dbj|BAC00537.1| DNA binding protein-like
[Oryza sativa (japonica cultivar-group)]
gi|10800070|dbj|BAB16490.1| DNA binding protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 267
Score = 131 bits (330), Expect = 3e-29
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 4/178 (2%)
Query: 141 EVGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVI 200
E+ K + E KA A KSHSEAERRRRERIN HLA LR+++P T K DKA+LLAEV+
Sbjct: 61 EMAKRNCGGGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVV 120
Query: 201 QHVKELKRQTSLIAETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLP 260
HVK+LK + + + VP+ DE+ VD A+ G +++A+L CDDR+DL
Sbjct: 121 GHVKKLKSAAARVGRRATVPSGADEVAVDEAS--ATGGGGEGPLLLRATLSCDDRADLFV 178
Query: 261 ELIKTLKALRLRTLKADITTLGGRVKNVLFIT--GEEDDHEYCISSIQEALKAVMEKS 316
++ + L+ L L + +++TTLGGRV+ ++ ++S++ AL++V++K+
Sbjct: 179 DVKRALQPLGLEVVGSEVTTLGGRVRLAFLVSCGSRGGAAAAAMASVRHALQSVLDKA 236
>gb|AAM10943.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|6598939|gb|AAF18734.1| hypothetical protein
[Arabidopsis thaliana] gi|4587994|gb|AAD25935.1|
hypothetical protein [Arabidopsis thaliana]
gi|25408672|pir||E84826 hypothetical protein At2g40200
[imported] - Arabidopsis thaliana
gi|15225658|ref|NP_181549.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
Length = 254
Score = 123 bits (309), Expect = 7e-27
Identities = 70/183 (38%), Positives = 115/183 (62%), Gaps = 7/183 (3%)
Query: 154 KALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLI 213
KA + S+SH AE+RRR+RIN+HL LR L+P++ K DKA+LLA VI+ VKELK++ +
Sbjct: 59 KAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAES 118
Query: 214 AETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRLRT 273
+PTE DE+TV D+ SN N I KAS CC+D+ + + E+I+ L L+L T
Sbjct: 119 PIFQDLPTEADEVTVQPET-ISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177
Query: 274 LKADITTLGGRVKNVLFITGEEDDHE-----YCISSIQEALKAVMEKSVGDESASGSVKR 328
++A+I ++GGR++ + FI + + +E +++++L + + + + + SV R
Sbjct: 178 IQAEIISVGGRMR-INFILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCR 236
Query: 329 QRT 331
R+
Sbjct: 237 IRS 239
>ref|XP_475649.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|50080285|gb|AAT69620.1| 'unknown protein, contains
helix-loop-helix DNA-binding domain,PF00010' [Oryza
sativa (japonica cultivar-group)]
gi|46981344|gb|AAT07662.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 271
Score = 115 bits (287), Expect = 2e-24
Identities = 71/187 (37%), Positives = 105/187 (55%), Gaps = 11/187 (5%)
Query: 153 AKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELK---RQ 209
A A HSEAERRRRERIN HLA LR +LP + DKA+LLA V+ VK LK +
Sbjct: 61 AAQATAMTIHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRATE 120
Query: 210 TSLIAETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKAL 269
+ + + +P E +E+TV A E + + ++A++ CDDR LL ++ T + L
Sbjct: 121 ATTPSTAATIPPEANEVTVQCYAGGEH--TAAARTYVRATVSCDDRPGLLADIAATFRRL 178
Query: 270 RLRTLKADITTLGGRVKNVLFITGEEDDHEYCISS---IQEALKAVMEKSVGDES---AS 323
RLR L AD++ LGGR ++ + EE++ E + ++EA++ + K E+
Sbjct: 179 RLRPLSADMSCLGGRTRHAFVLCREEEEEEDAAAEARPLKEAVRQALAKVALPETVYGGG 238
Query: 324 GSVKRQR 330
G KRQR
Sbjct: 239 GRSKRQR 245
>ref|XP_482961.1| bHLH protein family-like [Oryza sativa (japonica cultivar-group)]
gi|42407861|dbj|BAD09003.1| bHLH protein family-like
[Oryza sativa (japonica cultivar-group)]
Length = 223
Score = 111 bits (277), Expect = 4e-23
Identities = 66/189 (34%), Positives = 113/189 (58%), Gaps = 19/189 (10%)
Query: 143 GKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQH 202
G+ SA + + + A +SHSEAER+RR+RIN HLA LR+L+PS ++ DKA+LL EV++H
Sbjct: 5 GECSAAAVRKGGSPAV-RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRH 63
Query: 203 VKELKRQTSLIAETSP--VPTECDELTVDAAADDEDYGSNGNKFI----------IKASL 250
V+EL+ + E + VP E DE+ V+ DDE G + ++A +
Sbjct: 64 VRELRCRADDATEGADVVVPGEGDEVGVEDEDDDEGERDEGCYVVGGGDRRWRRRVRAWV 123
Query: 251 CCDDRSDLLPELIKTLKALRLRTLKADITTLGGRVKNVLFI------TGEEDDHEYCISS 304
CC DR L+ +L + ++++ R ++A++ T+GGR ++VL + ++D +S+
Sbjct: 124 CCADRPGLMSDLGRAVRSVSARPVRAEVATVGGRTRSVLELDVVVASDAADNDRAVALSA 183
Query: 305 IQEALKAVM 313
++ AL+ V+
Sbjct: 184 LRAALRTVL 192
>dbj|BAD33952.1| bHLH-like protein [Oryza sativa (japonica cultivar-group)]
Length = 215
Score = 100 bits (250), Expect = 5e-20
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 14/168 (8%)
Query: 158 ASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETS 217
A +SHSEAER+RRERIN HL LR L+PS ++ DKA+LL EV+++V++L+ + + +
Sbjct: 28 ARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEAA--GSAA 85
Query: 218 PVPTECDELTVDAAADDE-----DYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRLR 272
VP E DE+ V+ + D G +KAS+CC DR L+ EL +++ R
Sbjct: 86 VVPGEGDEVVVEEEEVEVEGCSCDAGERQAARRVKASVCCADRPGLMSELGDAERSVSAR 145
Query: 273 TLKADITTLGGRVKNVLFI-------TGEEDDHEYCISSIQEALKAVM 313
++A+I T+GGR ++ L + G + + ++Q AL+AV+
Sbjct: 146 AVRAEIATVGGRTRSDLELDVARTAAAGGGSNGASQLPALQAALRAVI 193
>ref|NP_195520.2| bHLH family protein [Arabidopsis thaliana]
Length = 1513
Score = 100 bits (249), Expect = 6e-20
Identities = 58/174 (33%), Positives = 101/174 (57%), Gaps = 14/174 (8%)
Query: 152 EAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS 211
E+K +AA K HS+AERRRR RIN+ A LR++LP+ K DKAS+L E +++ ELK+
Sbjct: 1344 ESKEVAAKK-HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK--- 1399
Query: 212 LIAETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRL 271
++ + P+ D L +D N N+ + + C DR L+ E+ +++KA++
Sbjct: 1400 MVQDIPTTPSLEDNLRLDHC--------NNNRDLARVVFSCSDREGLMSEVAESMKAVKA 1451
Query: 272 RTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSVGDESASGS 325
+ ++A+I T+GGR K LF+ G + + ++++LK V+ E+ + +
Sbjct: 1452 KAVRAEIMTVGGRTKCALFVQGVNGNEG--LVKLKKSLKLVVNGKSSSEAKNNN 1503
>emb|CAE12174.1| putative bHLH131 transcription factor [Arabidopsis thaliana]
Length = 256
Score = 100 bits (249), Expect = 6e-20
Identities = 58/174 (33%), Positives = 101/174 (57%), Gaps = 14/174 (8%)
Query: 152 EAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS 211
E+K +AA K HS+AERRRR RIN+ A LR++LP+ K DKAS+L E +++ ELK+
Sbjct: 87 ESKEVAAKK-HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK--- 142
Query: 212 LIAETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLKALRL 271
++ + P+ D L +D N N+ + + C DR L+ E+ +++KA++
Sbjct: 143 MVQDIPTTPSLEDNLRLDHC--------NNNRDLARVVFSCSDREGLMSEVAESMKAVKA 194
Query: 272 RTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSVGDESASGS 325
+ ++A+I T+GGR K LF+ G + + ++++LK V+ E+ + +
Sbjct: 195 KAVRAEIMTVGGRTKCALFVQGVNGNEG--LVKLKKSLKLVVNGKSSSEAKNNN 246
>emb|CAB80472.1| hypothetical protein [Arabidopsis thaliana]
gi|4467113|emb|CAB37547.1| hypothetical protein
[Arabidopsis thaliana] gi|7485848|pir||T05634
hypothetical protein F20D10.190 - Arabidopsis thaliana
Length = 1496
Score = 91.3 bits (225), Expect = 4e-17
Identities = 60/188 (31%), Positives = 101/188 (52%), Gaps = 28/188 (14%)
Query: 152 EAKALAASKSHSEAERRRRERINNHLAKLRSLLPS--------------TTKTDKASLLA 197
E+K +AA K HS+AERRRR RIN+ A LR++LP+ T + DKAS+L
Sbjct: 1313 ESKEVAAKK-HSDAERRRRLRINSQFATLRTILPNLVKRSNTFCIMFNETKQQDKASVLG 1371
Query: 198 EVIQHVKELKRQTSLIAETSPVPTECDELTVDAAADDEDYGSNGNKFIIKASLCCDDRSD 257
E +++ ELK+ I T P+ D L +D N N+ + + C DR
Sbjct: 1372 ETVRYFNELKKMVQDIPTT---PSLEDNLRLDHC--------NNNRDLARVVFSCSDREG 1420
Query: 258 LLPELIKTLKALRLRTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSV 317
L+ E+ +++KA++ + ++A+I T+GGR K LF+ G + + ++++LK V+
Sbjct: 1421 LMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFVQGVNGNEG--LVKLKKSLKLVVNGKS 1478
Query: 318 GDESASGS 325
E+ + +
Sbjct: 1479 SSEAKNNN 1486
>gb|AAP51779.1| putative bHLH transcription factor [Oryza sativa (japonica
cultivar-group)] gi|37530380|ref|NP_919492.1| putative
bHLH transcription factor [Oryza sativa (japonica
cultivar-group)] gi|18542931|gb|AAK00421.2| Putative
bHLH transcription factor [Oryza sativa]
Length = 361
Score = 70.1 bits (170), Expect = 9e-11
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 126 LQHGSGSGPFGGFQGEVGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLP 185
L+ SGP F + +M +A ++ + H AER+RRE+++ L S++P
Sbjct: 160 LEQQQDSGPMTKFCSPLSEMKRGG---RRATSSMQEHVIAERKRREKMHQQFTTLASIVP 216
Query: 186 STTKTDKASLLAEVIQHVKELKRQTSLIAET----SPVPTECDELTVDAAADDEDYGSNG 241
TKTDK S+L I++V L+ + ++ + S P D + + DDED N
Sbjct: 217 EITKTDKVSVLGSTIEYVHHLRERVKILQDIQSMGSTQPPISDARSRAGSGDDEDDDGNN 276
Query: 242 NKFIIKAS-----------LCCDDRSDLLPELIKTLKALRLRTLKADITTLGGRVKNVLF 290
N+ IK + C ++ +L +L+ L+ L L T+ ++ N+
Sbjct: 277 NEVEIKVEANLQGTTVLLRVVCPEKKGVLIKLLTELEKLGLSTMNTNVVPFADSSLNIT- 335
Query: 291 ITGEEDDHEYCISSIQEALKAVM 313
IT + D+ + + LK+ +
Sbjct: 336 ITAQIDNASCTTVELVKNLKSTL 358
>gb|AAM10932.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 590
Score = 67.8 bits (164), Expect = 4e-10
Identities = 79/357 (22%), Positives = 134/357 (37%), Gaps = 57/357 (15%)
Query: 2 IQEDQGQCSSQTINNFETYQQEQFLLQQQMMRQQNSDHHIF------------------- 42
I +++ + + ++N Q Q QQQ Q H F
Sbjct: 256 IDDNRTKIFGKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDA 315
Query: 43 ---GGGRSMFPTAGGDHNQVSPILQQTWSMQQLHHHHHPFNPHDPFVIPQQQASPYASLF 99
G R MF G ++N +L TW Q ++ P N + + + P
Sbjct: 316 YPNNGNRFMFSNPGTNNNT---LLSPTWV--QPENYTRPINVKEVPSTDEFKFLPLQQSS 370
Query: 100 NRRVPSLQFAYDHHAGSEHLRIISDTLQHGSGSGPFGGFQG--EVGKMSAQEI--MEAKA 155
R +P Q D A S S+ G G G + G E G ++ A
Sbjct: 371 QRLLPPAQMQIDFSAASSRA---SENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANG 427
Query: 156 LAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKEL-------KR 208
A + +H EAER+RRE++N LRS++P+ +K DKASLL + + ++ EL +
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 209 QTSLIAETSPVPTECD-ELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLK 267
+ + +S P D ++ V + +D + + C S + +
Sbjct: 488 ERERLGYSSNPPISLDSDINVQTSGED-----------VTVRINCPLESHPASRIFHAFE 536
Query: 268 ALRLRTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSVGDESASG 324
++ + +++ V + + EE E IS AL SV ++SG
Sbjct: 537 ESKVEVINSNLEVSQDTVLHTFVVKSEELTKEKLIS----ALSREQTNSVQSRTSSG 589
>gb|AAM53310.1| transcription factor MYC7E, putative [Arabidopsis thaliana]
gi|28416465|gb|AAO42763.1| At1g01260/F6F3_25
[Arabidopsis thaliana] gi|19310467|gb|AAL84968.1|
At1g01260/F6F3_25 [Arabidopsis thaliana]
gi|18026974|gb|AAL55720.1| putative transcription factor
BHLH13 [Arabidopsis thaliana]
gi|15223363|ref|NP_171634.1| basic helix-loop-helix
(bHLH) family protein [Arabidopsis thaliana]
gi|25350156|pir||H86142 F6F3.7 protein - Arabidopsis
thaliana gi|9665138|gb|AAF97322.1| Similar to
transcription factors [Arabidopsis thaliana]
Length = 590
Score = 67.8 bits (164), Expect = 4e-10
Identities = 79/357 (22%), Positives = 134/357 (37%), Gaps = 57/357 (15%)
Query: 2 IQEDQGQCSSQTINNFETYQQEQFLLQQQMMRQQNSDHHIF------------------- 42
I +++ + + ++N Q Q QQQ Q H F
Sbjct: 256 IDDNRTKIFGKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDA 315
Query: 43 ---GGGRSMFPTAGGDHNQVSPILQQTWSMQQLHHHHHPFNPHDPFVIPQQQASPYASLF 99
G R MF G ++N +L TW Q ++ P N + + + P
Sbjct: 316 YPNNGNRFMFSNPGTNNNT---LLSPTWV--QPENYTRPINVKEVPSTDEFKFLPLQQSS 370
Query: 100 NRRVPSLQFAYDHHAGSEHLRIISDTLQHGSGSGPFGGFQG--EVGKMSAQEI--MEAKA 155
R +P Q D A S S+ G G G + G E G ++ A
Sbjct: 371 QRLLPPAQMQIDFSAASSRA---SENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANG 427
Query: 156 LAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKEL-------KR 208
A + +H EAER+RRE++N LRS++P+ +K DKASLL + + ++ EL +
Sbjct: 428 RAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Query: 209 QTSLIAETSPVPTECD-ELTVDAAADDEDYGSNGNKFIIKASLCCDDRSDLLPELIKTLK 267
+ + +S P D ++ V + +D + + C S + +
Sbjct: 488 ERERLGYSSNPPISLDSDINVQTSGED-----------VTVRINCPLESHPASRIFHAFE 536
Query: 268 ALRLRTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSVGDESASG 324
++ + +++ V + + EE E IS AL SV ++SG
Sbjct: 537 ESKVEVINSNLEVSQDTVLHTFVVKSEELTKEKLIS----ALSREQTNSVQSRTSSG 589
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 547,883,793
Number of Sequences: 2540612
Number of extensions: 23000585
Number of successful extensions: 105283
Number of sequences better than 10.0: 1374
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 914
Number of HSP's that attempted gapping in prelim test: 102999
Number of HSP's gapped (non-prelim): 2124
length of query: 338
length of database: 863,360,394
effective HSP length: 128
effective length of query: 210
effective length of database: 538,162,058
effective search space: 113014032180
effective search space used: 113014032180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)
Medicago: description of AC146570.4