BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146567.10 + phase: 0
(393 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_851235.1| nuclear transport factor 2 (NTF2) family protei... 254 4e-66
dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] g... 253 5e-66
gb|AAM62628.1| ras-GTPase-activating protein SH3-domain binding ... 253 9e-66
gb|AAM47313.1| AT3g25150/MJL12_9 [Arabidopsis thaliana] gi|17979... 244 3e-63
emb|CAD40577.1| OSJNBa0069D17.2 [Oryza sativa (japonica cultivar... 244 4e-63
ref|XP_465810.1| putative Ras-GTPase-activating protein binding ... 239 8e-62
dbj|BAB02073.1| RNA-binding protein-like [Arabidopsis thaliana] 236 7e-61
gb|AAP31925.1| At1g13730 [Arabidopsis thaliana] gi|22655180|gb|A... 226 7e-58
gb|AAR01693.1| putative GAP SH3 binding protein [Oryza sativa (j... 220 7e-56
gb|AAD20086.1| unknown protein [Arabidopsis thaliana] gi|2541102... 213 8e-54
dbj|BAC43647.1| unknown protein [Arabidopsis thaliana] gi|289510... 213 1e-53
ref|XP_479070.1| putative Ras-GTPase activating protein SH3 doma... 205 2e-51
gb|AAP12857.1| At1g69250 [Arabidopsis thaliana] gi|15222258|ref|... 195 2e-48
ref|NP_974111.1| nuclear transport factor 2 (NTF2) family protei... 172 1e-41
dbj|BAB10698.1| RNA-binding protein-like [Arabidopsis thaliana] 157 4e-37
gb|AAO64060.1| putative NTF2-containing RNA-binding protein [Ara... 156 9e-37
ref|XP_464011.1| putative Ras-GTPase activating protein SH3 doma... 155 2e-36
gb|AAH45051.1| G3bp-prov protein [Xenopus laevis] 124 4e-27
dbj|BAE00650.1| unnamed protein product [Macaca fascicularis] 123 1e-26
ref|NP_001017046.1| hypothetical protein LOC549800 [Xenopus trop... 122 2e-26
>ref|NP_851235.1| nuclear transport factor 2 (NTF2) family protein / RNA recognition
motif (RRM)-containing protein [Arabidopsis thaliana]
Length = 459
Score = 254 bits (648), Expect = 4e-66
Identities = 161/385 (41%), Positives = 222/385 (56%), Gaps = 36/385 (9%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTA 60
MA EA +P ++VG AFVEQYY ILH+ P VHRFY DSS ++RP+ G +TTVTT
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 61 EIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDK 120
I+ KI SL+Y + E+ +ADAQ S+ GV+V+VTG LTG DN+++KF+QSFFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 121 GFYVLNDVFRYVDAYK-SIDIESVPANDADESAPSEAIITPEPEPV-HVPEVIPPTQTVI 178
G++VLNDVFR+++ + + SVP N +A I PE V H PEV P
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPINGTTRDV--QAPIEPERVVVSHEPEVEPE----- 173
Query: 179 PTAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPT 238
P A I + + EV P + + V +V P+ EP
Sbjct: 174 PVAS---------IEEEDLDNVAEVYDPSDKDE-GVVVDVEPI-----------EPPTQI 212
Query: 239 SIEKVASNTQEDTPKKSFASIVNALKDNSAP-FHLRASPAKPAVHPPRVHSVPAPEAPTP 297
S ++ S Q D PK S+ASI+ +K + AP H+ + +PA ++ + PA A P
Sbjct: 213 SHNEILSVPQGDAPKHSYASILKQMKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAARP 272
Query: 298 ----NMDIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK-G 352
+ ++P + + H+I+V NLP +T QL+ FK FG IK +GIQVRSNK G
Sbjct: 273 EASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQG 332
Query: 353 SCFGFVEFESAASMQSALEVWSISI 377
CFGFVEFE+++ QSALE ++I
Sbjct: 333 FCFGFVEFETSSGKQSALEASPVTI 357
>dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana]
gi|27764908|gb|AAO23575.1| At5g60980/MSL3_100
[Arabidopsis thaliana] gi|30697455|ref|NP_200906.2|
nuclear transport factor 2 (NTF2) family protein / RNA
recognition motif (RRM)-containing protein [Arabidopsis
thaliana] gi|17063173|gb|AAL32982.1| AT5g60980/MSL3_100
[Arabidopsis thaliana]
Length = 460
Score = 253 bits (647), Expect = 5e-66
Identities = 161/386 (41%), Positives = 222/386 (56%), Gaps = 37/386 (9%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTA 60
MA EA +P ++VG AFVEQYY ILH+ P VHRFY DSS ++RP+ G +TTVTT
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 61 EIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDK 120
I+ KI SL+Y + E+ +ADAQ S+ GV+V+VTG LTG DN+++KF+QSFFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 121 GFYVLNDVFRYVDAYK-SIDIESVPANDADESAPSEAIITPEPEPV-HVPEVIPPTQTVI 178
G++VLNDVFR+++ + + SVP N +A I PE V H PEV P
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPINGTTRDV--QAPIEPERVVVSHEPEVEPE----- 173
Query: 179 PTAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPT 238
P A I + + EV P + + V +V P+ EP
Sbjct: 174 PVAS---------IEEEDLDNVAEVYDPSDKDE-GVVVDVEPI-----------EPPTQI 212
Query: 239 SIEKVASNTQEDTPKKSFASIVNALKDNSAP-FHLRASPAKPAVHPPRVHSVPAPEAPTP 297
S ++ S Q D PK S+ASI+ +K + AP H+ + +PA ++ + PA A P
Sbjct: 213 SHNEILSVPQGDAPKHSYASILKQMKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAARP 272
Query: 298 ----NMDIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK-- 351
+ ++P + + H+I+V NLP +T QL+ FK FG IK +GIQVRSNK
Sbjct: 273 EASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQ 332
Query: 352 GSCFGFVEFESAASMQSALEVWSISI 377
G CFGFVEFE+++ QSALE ++I
Sbjct: 333 GFCFGFVEFETSSGKQSALEASPVTI 358
>gb|AAM62628.1| ras-GTPase-activating protein SH3-domain binding protein-like
[Arabidopsis thaliana]
Length = 459
Score = 253 bits (645), Expect = 9e-66
Identities = 161/385 (41%), Positives = 221/385 (56%), Gaps = 36/385 (9%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTA 60
MA EA +P ++VG AFVEQYY ILH+ P VHRFY DSS ++RP+ G +TTVTT
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 61 EIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDK 120
I+ KI SL+Y + E+ +ADAQ S+ GV+V VTG LTG DN+++KF+QSFFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVPVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 121 GFYVLNDVFRYVDAYK-SIDIESVPANDADESAPSEAIITPEPEPV-HVPEVIPPTQTVI 178
G++VLNDVFR+++ + + SVP N +A I PE V H PEV P
Sbjct: 121 GYFVLNDVFRFLEEKEVTAQARSVPINGTTRDV--QAPIEPERVVVSHEPEVEPE----- 173
Query: 179 PTAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPT 238
P A I + + EV P + + V +V P+ EP
Sbjct: 174 PVAS---------IEEEDLDNVAEVYDPSDKDE-GVVVDVEPI-----------EPPTQI 212
Query: 239 SIEKVASNTQEDTPKKSFASIVNALKDNSAP-FHLRASPAKPAVHPPRVHSVPAPEAPTP 297
S ++ S Q D PK S+ASI+ +K + AP H+ + +PA ++ + PA A P
Sbjct: 213 SHNEILSVPQGDAPKHSYASILKQMKSSPAPTTHVARNKPRPAPVNQKLTAPPAEPAARP 272
Query: 298 ----NMDIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK-G 352
+ ++P + + H+I+V NLP +T QL+ FK FG IK +GIQVRSNK G
Sbjct: 273 EASAHENVPNSSHVDVEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQG 332
Query: 353 SCFGFVEFESAASMQSALEVWSISI 377
CFGFVEFE+++ QSALE ++I
Sbjct: 333 FCFGFVEFETSSGKQSALEASPVTI 357
>gb|AAM47313.1| AT3g25150/MJL12_9 [Arabidopsis thaliana] gi|17979475|gb|AAL50074.1|
AT3g25150/MJL12_9 [Arabidopsis thaliana]
gi|30687772|ref|NP_189151.2| nuclear transport factor 2
(NTF2) family protein / RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 488
Score = 244 bits (624), Expect = 3e-63
Identities = 148/394 (37%), Positives = 214/394 (53%), Gaps = 34/394 (8%)
Query: 1 MAVPEAVQTP----TPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTV 56
MA+ A Q P TP MVGNAFV QYY ILH+ P+ VHRFY + S + RPEE+G M+
Sbjct: 1 MAMLGAQQVPAAACTPDMVGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSIT 60
Query: 57 TTTAEIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLA 116
+T IDKKI +L Y E+ + D Q S+ G +V+VTG LTG D+++R F+Q+FFLA
Sbjct: 61 STLQAIDKKIMALGYGVISAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLA 120
Query: 117 PQDKGFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQT 176
PQ+ G++VLND+FR++D + +P N+ AP + + IP
Sbjct: 121 PQETGYFVLNDMFRFIDEGTVVHGNQIPVNNV--QAPVNTY-----QDTAAAKEIPDDFV 173
Query: 177 VIPTAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQ 236
Q QT + ++V P E+ ++S E + V E+
Sbjct: 174 QEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEA--------- 224
Query: 237 PTSIEKVASNTQE--DTPKKSFASIVNALKDNSAPFHLRASPAK--------PAVHPPRV 286
P ++KV + + PK+S+ASIV +K+N+AP +P K A+H P
Sbjct: 225 PIEVQKVGESDSRTGEIPKRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPL- 283
Query: 287 HSVPAPEAPTPNMDIPLEKNNENAGRA--HAIFVANLPMSATVEQLDRAFKKFGPIKRDG 344
P E ++ + +NN+ RA +I++ LP+ AT L+ F+KFG I+ +G
Sbjct: 284 -PTPLSEKSDSGANVAVNENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNG 342
Query: 345 IQVRSNKGSCFGFVEFESAASMQSALEVWSISIN 378
IQVRS KG CFGFVEFESA+SMQSA+E + +N
Sbjct: 343 IQVRSQKGFCFGFVEFESASSMQSAIEASPVMLN 376
>emb|CAD40577.1| OSJNBa0069D17.2 [Oryza sativa (japonica cultivar-group)]
gi|50923623|ref|XP_472172.1| OSJNBa0069D17.2 [Oryza
sativa (japonica cultivar-group)]
Length = 486
Score = 244 bits (622), Expect = 4e-63
Identities = 160/391 (40%), Positives = 215/391 (54%), Gaps = 34/391 (8%)
Query: 10 PTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGT--MTTVTTTAEIDKKIQ 67
P+ Q+VGNAFV QYY+ILH+ PD VHRFY D S + RP M TVTT I+ KI
Sbjct: 18 PSAQVVGNAFVHQYYNILHQSPDLVHRFYQDGSRIGRPASPAAAEMDTVTTMEAINAKIV 77
Query: 68 SLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLND 127
S++ R E+ + DAQ S GV V+VTG LTG+D+++R+F+QSFFLAPQ+KG++VLND
Sbjct: 78 SMDIV--RAEIKAVDAQESLGGGVTVLVTGHLTGSDDVRREFSQSFFLAPQEKGYFVLND 135
Query: 128 VFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPP 187
+ RYV ++E P + + S P + +P+ V P T +P Q
Sbjct: 136 ILRYVGGEGDQEVE--PEPELELSFPP----SQQPDSVPAPSA---NGTSVPREQEAFSQ 186
Query: 188 TQTVIAD------TETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIE 241
+ +AD + +EV P N + V E + E ++V
Sbjct: 187 PEQHVADPAPNAQEADLNGEEVYNPPNNTEGPVVEETPIPEVIDEVPNNVAVAMPTPPAP 246
Query: 242 KVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVPAPEAPTPNMDI 301
A QE+ PKKS+ASIV +K+ P + A P++PA PP+ AP P D
Sbjct: 247 APAPVPQEEAPKKSYASIVKVMKE--IPPQISAIPSRPA--PPKQEKQVAPAPVAPVADA 302
Query: 302 PLEKNNENAGR-------AHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK--G 352
P N + AHAI+V NLP+SAT EQL+ AFKKFG IK DGIQVRS+K G
Sbjct: 303 PTFSPNPESSNIQEAEVDAHAIYVRNLPLSATPEQLEEAFKKFGAIKPDGIQVRSHKIQG 362
Query: 353 SCFGFVEFESAASMQSAL--EVWSISINSCY 381
C+GFVEFE +S+QSA+ +IS CY
Sbjct: 363 FCYGFVEFEDPSSVQSAIAGSPVTISDRQCY 393
>ref|XP_465810.1| putative Ras-GTPase-activating protein binding protein 1 [Oryza
sativa (japonica cultivar-group)]
gi|48716424|dbj|BAD23032.1| putative
Ras-GTPase-activating protein binding protein 1 [Oryza
sativa (japonica cultivar-group)]
Length = 480
Score = 239 bits (611), Expect = 8e-62
Identities = 159/395 (40%), Positives = 216/395 (54%), Gaps = 32/395 (8%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEED--GTMTTVTT 58
MA P+A +P+ Q+VGNAFV+QYY ILH+ PD V+RFY D+S + RP D G M +VTT
Sbjct: 1 MAAPQASPSPSAQVVGNAFVQQYYQILHQSPDLVYRFYQDASRLGRPPADRYGDMVSVTT 60
Query: 59 TAEIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQ 118
I++KI +++ + R E+ + D+Q S GV V+VTG LT D + R+F+QSFFLAPQ
Sbjct: 61 MEAINEKIMAMDMS--RAEIKTVDSQESLGGGVTVLVTGHLTVRDGVCREFSQSFFLAPQ 118
Query: 119 DKGFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVI 178
+KG++VLND+FRYV D + A A E P + P P+ P Q
Sbjct: 119 EKGYFVLNDMFRYVG-----DGPTPAAAAAAEVQPEADAVAP---PLANGTATAPLQPAA 170
Query: 179 PTAQTVIPPTQTVIADTETIISKEVSL---PLENGKLSVTENVIPVNHVKESSHHVKEPE 235
P + V+ + +E + PLE + E V E + V
Sbjct: 171 PDYDAMPHEEPDVVENVAVPPEEEEEVYNPPLEEVEGGAVEE---EQSVPEVINEVPNNV 227
Query: 236 QPTSIEKVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHP----PRVHSVPA 291
P A + E+ PKKS+ASIV +K+ P + A+ PA P P S PA
Sbjct: 228 VPVVAPADAPVSHEEAPKKSYASIVKVMKEAPVPAPIPATRPAPAARPAPPKPEKQS-PA 286
Query: 292 PEAPTPNMD-IPLEKNNENAGR------AHAIFVANLPMSATVEQLDRAFKKFGPIKRDG 344
P AP P D P N E++ AHAI+V +LP++AT QL+ FKKFG IK DG
Sbjct: 287 PPAPAPVADATPFSSNAESSNTHEPEVDAHAIYVRSLPLNATTTQLEDEFKKFGTIKPDG 346
Query: 345 IQVRSNK--GSCFGFVEFESAASMQSALEVWSISI 377
IQVRS+K G C+GFVEFE A ++QSA+E + I
Sbjct: 347 IQVRSHKIQGFCYGFVEFEEATAVQSAIEASPVMI 381
>dbj|BAB02073.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 236 bits (603), Expect = 7e-61
Identities = 140/376 (37%), Positives = 205/376 (54%), Gaps = 30/376 (7%)
Query: 15 VGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEYTSF 74
VGNAFV QYY ILH+ P+ VHRFY + S + RPEE+G M+ +T IDKKI +L Y
Sbjct: 4 VGNAFVPQYYHILHQSPEHVHRFYQEISKLGRPEENGLMSITSTLQAIDKKIMALGYGVI 63
Query: 75 RVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVFRYVDA 134
E+ + D Q S+ G +V+VTG LTG D+++R F+Q+FFLAPQ+ G++VLND+FR++D
Sbjct: 64 SAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDE 123
Query: 135 YKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQTVIAD 194
+ +P N+ AP + + IP Q QT +
Sbjct: 124 GTVVHGNQIPVNNV--QAPVNTY-----QDTAAAKEIPDDFVQEKYVQENHAVKQTEVLS 176
Query: 195 TETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQE--DTP 252
++V P E+ ++S E + V E+ P ++KV + + P
Sbjct: 177 KSINEPEKVFTPSEDEQVSAAEEALVTETVNEA---------PIEVQKVGESDSRTGEIP 227
Query: 253 KKSFASIVNALKDNSAPFHLRASPAK--------PAVHPPRVHSVPAPEAPTPNMDIPLE 304
K+S+ASIV +K+N+AP +P K A+H P P E ++ +
Sbjct: 228 KRSYASIVKVMKENAAPMSASRTPTKVEPKKQEDQAIHIPL--PTPLSEKSDSGANVAVN 285
Query: 305 KNNENAGRA--HAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNKGSCFGFVEFES 362
+NN+ RA +I++ LP+ AT L+ F+KFG I+ +GIQVRS KG CFGFVEFES
Sbjct: 286 ENNQENERALGPSIYLKGLPLDATPALLENEFQKFGLIRTNGIQVRSQKGFCFGFVEFES 345
Query: 363 AASMQSALEVWSISIN 378
A+SMQSA+E + +N
Sbjct: 346 ASSMQSAIEASPVMLN 361
>gb|AAP31925.1| At1g13730 [Arabidopsis thaliana] gi|22655180|gb|AAM98180.1|
expressed protein [Arabidopsis thaliana]
gi|18394029|ref|NP_563932.1| nuclear transport factor 2
(NTF2) family protein / RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
gi|16648785|gb|AAL25583.1| At1g13730/F21F23_12
[Arabidopsis thaliana] gi|25518618|pir||F86270
hypothetical protein F21F23.16 - Arabidopsis thaliana
gi|8920577|gb|AAF81299.1| Strong similarity to a
hypothetical protein At2g03640 gi|4406775 from
Arabidopsis thaliana BAC T18C20 gb|AC006836. It
contains a nuclear transport factor 2 (NTF2) domain
PF|02136
Length = 428
Score = 226 bits (577), Expect = 7e-58
Identities = 144/374 (38%), Positives = 200/374 (52%), Gaps = 41/374 (10%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTA 60
MA+ P +GN+FVE+YY++L++ P QVH+FY D SV+ RP DG M +V +
Sbjct: 1 MALESNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLK 60
Query: 61 EIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDK 120
I+++I S +Y ++++L+AD+Q SY NGV+ +VTG LT + + +F+QSFFL P +
Sbjct: 61 AINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNG 120
Query: 121 GFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPT 180
++VLNDVFRYV ADE EA E E V +P+V+ PT+ V
Sbjct: 121 SYFVLNDVFRYV---------------ADEIVEPEA-NKKEVEEV-IPQVVQPTEQVDEV 163
Query: 181 AQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSI 240
A+ V PTQ A TEN + ++ H K E
Sbjct: 164 AEPVTIPTQQPEAK------------------QTTENTVKKPERAVANGHPKTQEDNVVN 205
Query: 241 EKVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHP-PRVHSVPAPEAPTPNM 299
+K + D PKKSFA IV L N A F+ +ASPAKP P + + +AP P
Sbjct: 206 DK---SNGVDAPKKSFAHIVQDLAQNGATFNAKASPAKPKSKPVTKPSAARESKAPAPVS 262
Query: 300 DIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSN--KGSCFGF 357
+ + + IFVANL M AT EQL+ FK FG I +DGIQVRS KG+CFGF
Sbjct: 263 EHSSAATIDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKGNCFGF 322
Query: 358 VEFESAASMQSALE 371
V F SA +++ L+
Sbjct: 323 VTFASAEAVKLVLQ 336
>gb|AAR01693.1| putative GAP SH3 binding protein [Oryza sativa (japonica
cultivar-group)] gi|31126693|gb|AAP44616.1| putative GAP
SH3 binding protein [Oryza sativa (japonica
cultivar-group)] gi|50916653|ref|XP_468723.1| putative
GAP SH3 binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 488
Score = 220 bits (560), Expect = 7e-56
Identities = 138/374 (36%), Positives = 207/374 (54%), Gaps = 40/374 (10%)
Query: 11 TPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLE 70
+PQ++ AFV+QYY ILH PDQV++FY D+S++ RP+ +G M V+TTA+I+K I S++
Sbjct: 13 SPQVISGAFVQQYYHILHETPDQVYKFYQDASIVGRPDSNGVMKYVSTTADINKIILSMD 72
Query: 71 YTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFY-VLNDVF 129
++++ E+ +ADAQ S+ +GV++VVTG LT ++ I R+F QSFFLAPQ+ G Y VLND+F
Sbjct: 73 FSNYLTEIETADAQLSHQDGVLIVVTGSLT-SEGICRRFTQSFFLAPQESGGYVVLNDIF 131
Query: 130 RYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQ 189
R++ + I V + + + + + + +P P + P +
Sbjct: 132 RFIVERPPVAISQV-SQENENNQNTATLPETDPNPAGDGMISEPV------------AVE 178
Query: 190 TVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQE 249
+A+ E S +EN + E PV KE + P Q+
Sbjct: 179 NNVAEGEVTNSTVDGTSIENNATAAVEP--PVQMTKEEPRKISVAAPPPP-------AQK 229
Query: 250 DTPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVPAPEAP----------TPNM 299
D KKS+ASIV +K+ S ++ PA V V +V A E P TPN
Sbjct: 230 DVTKKSYASIVKVMKEVSLTPVVKPKPAPKHV----VKTVEASEKPSVKSSQTVEITPND 285
Query: 300 DIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK--GSCFGF 357
+ E N N + +++FV +LP + TV+ ++ FKKFG IK GIQVR+NK CFGF
Sbjct: 286 NNDAENNTSNDEQGYSVFVKSLPHNVTVQTVEEEFKKFGAIKPGGIQVRNNKIDRFCFGF 345
Query: 358 VEFESAASMQSALE 371
+EFES SMQ+A+E
Sbjct: 346 IEFESQQSMQAAIE 359
>gb|AAD20086.1| unknown protein [Arabidopsis thaliana] gi|25411027|pir||H84450
hypothetical protein At2g03640 [imported] - Arabidopsis
thaliana
Length = 423
Score = 213 bits (542), Expect = 8e-54
Identities = 137/365 (37%), Positives = 202/365 (54%), Gaps = 46/365 (12%)
Query: 12 PQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEY 71
PQ VGN FV++YY+ L+ +VH+FY + S++SRP DG + T+ + I+ +I S++Y
Sbjct: 12 PQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDY 71
Query: 72 TSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVFRY 131
S R+E+L+AD+Q + NGV+ +VTG + G D +RKF+QSFFL ++ ++VLND FRY
Sbjct: 72 KSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRY 131
Query: 132 V-DAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQT 190
V D + +E + +ES + AI T EP V VI PT+
Sbjct: 132 VSDEF----VEPEATKEVEESQSTNAI-TAEPANESVEAVIVPTEA-------------- 172
Query: 191 VIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQED 250
+T ++K S + NG V E + V E+S K E + QE+
Sbjct: 173 -----KTTVTKPASA-IPNGHAKVPEEKV----VNENSSLPKAAE---------AKLQEE 213
Query: 251 TPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVPAPE--APTPNMDIPLEKNNE 308
PKKSFA IV +L ++ ++ASP K P V APE AP+P ++ +
Sbjct: 214 VPKKSFALIVQSLAQSAGTLQVKASPVK---RKPVEKPVAAPERKAPSPIRKQASAESIK 270
Query: 309 NAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRS--NKGSCFGFVEFESAASM 366
+ +IFVANLPM AT+EQL FK FG I++DGIQVRS K +C GFV FE+ ++
Sbjct: 271 PQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAV 330
Query: 367 QSALE 371
++ +
Sbjct: 331 KNVFQ 335
>dbj|BAC43647.1| unknown protein [Arabidopsis thaliana] gi|28951005|gb|AAO63426.1|
At2g03640 [Arabidopsis thaliana]
gi|30678068|ref|NP_178462.3| nuclear transport factor 2
(NTF2) family protein / RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 422
Score = 213 bits (541), Expect = 1e-53
Identities = 136/365 (37%), Positives = 202/365 (55%), Gaps = 47/365 (12%)
Query: 12 PQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEY 71
PQ VGN FV++YY+ L+ +VH+FY + S++SRP DG + T+ + I+ +I S++Y
Sbjct: 12 PQFVGNGFVQEYYNHLYDSTSEVHKFYLEDSMISRPGLDGEIVTIKSLKGINDQIMSIDY 71
Query: 72 TSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVFRY 131
S R+E+L+AD+Q + NGV+ +VTG + G D +RKF+QSFFL ++ ++VLND FRY
Sbjct: 72 KSSRIEILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRY 131
Query: 132 V-DAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQT 190
V D + +E + +ES + AI P E V + VI PT
Sbjct: 132 VSDEF----VEPEATKEVEESQSTNAITEPANESV----------------EAVIVPT-- 169
Query: 191 VIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQED 250
+ +T ++K S + NG V E + V E+S K E + QE+
Sbjct: 170 ---EAKTTVTKPAS-AIPNGHAKVPEEKV----VNENSSLPKAAE---------AKLQEE 212
Query: 251 TPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVPAPE--APTPNMDIPLEKNNE 308
PKKSFA IV +L ++ ++ASP K P V APE AP+P ++ +
Sbjct: 213 VPKKSFALIVQSLAQSAGTLQVKASPVK---RKPVEKPVAAPERKAPSPIRKQASAESIK 269
Query: 309 NAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRS--NKGSCFGFVEFESAASM 366
+ +IFVANLPM AT+EQL FK FG I++DGIQVRS K +C GFV FE+ ++
Sbjct: 270 PQAQGSSIFVANLPMDATIEQLYETFKSFGAIRKDGIQVRSYPEKKNCIGFVAFENGEAV 329
Query: 367 QSALE 371
++ +
Sbjct: 330 KNVFQ 334
>ref|XP_479070.1| putative Ras-GTPase activating protein SH3 domain-binding protein 2
[Oryza sativa (japonica cultivar-group)]
gi|34394922|dbj|BAC84474.1| putative Ras-GTPase
activating protein SH3 domain-binding protein 2 [Oryza
sativa (japonica cultivar-group)]
gi|50509678|dbj|BAD31715.1| putative Ras-GTPase
activating protein SH3 domain-binding protein 2 [Oryza
sativa (japonica cultivar-group)]
Length = 569
Score = 205 bits (522), Expect = 2e-51
Identities = 138/395 (34%), Positives = 215/395 (53%), Gaps = 27/395 (6%)
Query: 1 MAVPEAVQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTA 60
M V E+V +PQM+GNAFV+QYY++LH P QV +FYHDSS + RP+ +GTMT+VTT
Sbjct: 3 MQVGESVAPLSPQMIGNAFVQQYYNVLHSSPGQVCKFYHDSSTLGRPDSNGTMTSVTTLT 62
Query: 61 EIDKKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDK 120
I+ + S +++S +++ + DAQ S N GV ++VTG + ++ +F+QSFFLAPQ+
Sbjct: 63 AINDEFLSTDFSSCLIKLENVDAQLSLNGGVHILVTGSIGHNGTMRHRFSQSFFLAPQES 122
Query: 121 -GFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITP--EPEPVHVPEVIPPTQTV 177
G++VLND+ RY +++ E+ ND +P E ++T + P HV + T +V
Sbjct: 123 GGYFVLNDMLRYDSLQETLLTET---ND----SPQERLLTEINDSLPNHVDD---NTHSV 172
Query: 178 IPTAQTVIPPTQTVIADTETIISKEVSLPLEN---GKLSVTENVIPVNHVKESSHHVKEP 234
T++ AD E ++ V+ +EN S ENV+ + S +
Sbjct: 173 TFTSEPETSGNVNETADLELPSAENVNDNVENLPANDSSPEENVLVEACTEVVSSCAENI 232
Query: 235 EQPTSIEKVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPR------VHS 288
++TQ+D K+S+AS+V K+ + + KP P +
Sbjct: 233 PAAAPAPAPRASTQKDVTKQSYASVVKVTKEGTPTPPVAKPKPKPKPKPTAKVTDNVEKA 292
Query: 289 VPAPEAPTPNMDI--PLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQ 346
V +P PT D P +K N + ++++V +LP T + ++ F+KFG I+ GIQ
Sbjct: 293 VSSPVKPTNAADTTSPNDK-NVLVEQGYSVYVKHLPYECTTKDVEEKFRKFGAIRPGGIQ 351
Query: 347 VRSNK--GSCFGFVEFESAASMQSALEVWSISINS 379
VR + G CFGFVEFES SM +A+E +SI S
Sbjct: 352 VRHRQPDGFCFGFVEFESRQSMLAAIEASPVSIGS 386
>gb|AAP12857.1| At1g69250 [Arabidopsis thaliana] gi|15222258|ref|NP_177085.1|
nuclear transport factor 2 (NTF2) family protein / RNA
recognition motif (RRM)-containing protein [Arabidopsis
thaliana] gi|12325079|gb|AAG52488.1| putative
RNA-binding protein; 63745-61607 [Arabidopsis thaliana]
gi|25404804|pir||E96716 probable RNA-binding protein
F23O10.17 [imported] - Arabidopsis thaliana
gi|6730639|gb|AAF27060.1| F4N2.20 [Arabidopsis thaliana]
Length = 427
Score = 195 bits (495), Expect = 2e-48
Identities = 132/375 (35%), Positives = 203/375 (53%), Gaps = 54/375 (14%)
Query: 10 PTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSL 69
P+ Q + FV QYY +L + P + R Y D+SV+SRP+ GTM + T+ I+K I S
Sbjct: 8 PSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSC 67
Query: 70 EYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVF 129
++ + + EVLS D+Q S +G+ ++V G +TG DN +RKF+Q F+LA Q+ VLND+
Sbjct: 68 DFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVVLNDML 126
Query: 130 RYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQ 189
RYV D ++S+ +E P V E++ P + +T + Q
Sbjct: 127 RYV--------------DQEDSSTTETPCEP------VTEIVRPADGLKKAEKTEL--KQ 164
Query: 190 TVIADTETIISKEV---SLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASN 246
+A E ++ V + PL+NGK+ +E + + V EP+ +
Sbjct: 165 KNVASVEKSVNAAVEKNAAPLDNGKMKQSEKAV-------ITQKVTEPD---------AA 208
Query: 247 TQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVP----APEAPTPNMDIP 302
Q D K+SFA IV ++ N+APF ++ SP + V P+ P AP+ P +
Sbjct: 209 PQPDGAKRSFADIVGSMAKNAAPFQVK-SPVQAPVQKPKYVGQPRAAAAPQKPA-YVSKS 266
Query: 303 LEKNNENAGR--AHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNKGS----CFG 356
++KN++ +IFVANLP++A QL FK FGPIK +GIQVRS++G+ CFG
Sbjct: 267 IKKNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSRGNANPVCFG 326
Query: 357 FVEFESAASMQSALE 371
F+ FE+ AS+QS L+
Sbjct: 327 FISFETVASVQSVLQ 341
>ref|NP_974111.1| nuclear transport factor 2 (NTF2) family protein / RNA recognition
motif (RRM)-containing protein [Arabidopsis thaliana]
Length = 389
Score = 172 bits (437), Expect = 1e-41
Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 50/351 (14%)
Query: 10 PTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSL 69
P+ Q + FV QYY +L + P + R Y D+SV+SRP+ GTM + T+ I+K I S
Sbjct: 8 PSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSC 67
Query: 70 EYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVF 129
++ + + EVLS D+Q S +G+ ++V G +TG DN +RKF+Q F+LA Q+ VLND+
Sbjct: 68 DFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT-LVVLNDML 126
Query: 130 RYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQ 189
RYV D ++S+ +E P V E++ P + +T + Q
Sbjct: 127 RYV--------------DQEDSSTTETPCEP------VTEIVRPADGLKKAEKTEL--KQ 164
Query: 190 TVIADTETIISKEV---SLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASN 246
+A E ++ V + PL+NGK+ +E + + V EP+ +
Sbjct: 165 KNVASVEKSVNAAVEKNAAPLDNGKMKQSEKAV-------ITQKVTEPD---------AA 208
Query: 247 TQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVHPPRVHSVP----APEAPTPNMDIP 302
Q D K+SFA IV ++ N+APF ++ SP + V P+ P AP+ P +
Sbjct: 209 PQPDGAKRSFADIVGSMAKNAAPFQVK-SPVQAPVQKPKYVGQPRAAAAPQKPA-YVSKS 266
Query: 303 LEKNNENAGR--AHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK 351
++KN++ +IFVANLP++A QL FK FGPIK +GIQVRS++
Sbjct: 267 IKKNDQKVIEVPGTSIFVANLPLNAMPPQLFELFKDFGPIKENGIQVRSSR 317
>dbj|BAB10698.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 461
Score = 157 bits (398), Expect = 4e-37
Identities = 124/404 (30%), Positives = 191/404 (46%), Gaps = 67/404 (16%)
Query: 12 PQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEY 71
P VG+AFV QYY I P+ + RFY + S + R +DG M +T I ++++ L Y
Sbjct: 13 PLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTY 72
Query: 72 TSFR-VEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVFR 130
E+ S D Q S+N G ++ VTG T + +RKF Q+FFLAPQ+KGF+VLND+ R
Sbjct: 73 GDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDILR 132
Query: 131 YVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQT 190
+V+ +DA ++ PE V I T I A T + ++
Sbjct: 133 FVN------------DDAKDN-------VPETIDGEVVSGINSTTPTIINAPTGMKGSEQ 173
Query: 191 VIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQE- 249
+ + KEVS PL+N + +NV+ V E ++ V E + ++VA ++Q+
Sbjct: 174 AACVSVNPVCKEVSKPLDNE--NAKDNVL----VPEIANEVARTE--ITCKEVADDSQKN 225
Query: 250 --------DTPKKSFASIVNALKDN-SAPFHLRASPAKPAVHPPRVHSVPAP-------- 292
D PKKS+AS++ KD P SP K + + H P+
Sbjct: 226 YDPDDGLADAPKKSYASVLKVTKDKFGVPAVSLPSPKK--IPKDQEHQAPSDPSTGQILK 283
Query: 293 --------------EAPTPNMDIPLEKNNEN---AGRAHAIFVANLPMSATVEQLDRAFK 335
E+ T + + +N N +I+V +LP +A ++ L+ FK
Sbjct: 284 DQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEFK 343
Query: 336 KFGPIKRDGIQVRSNK--GSCFGFVEFESAASMQSALEVWSISI 377
+FG I GIQV + + G +GFVEFE A + A+E + I
Sbjct: 344 QFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEASPVKI 387
>gb|AAO64060.1| putative NTF2-containing RNA-binding protein [Arabidopsis thaliana]
gi|27754467|gb|AAO22681.1| putative NTF2-containing
RNA-binding protein [Arabidopsis thaliana]
gi|30695510|ref|NP_199676.2| nuclear transport factor 2
(NTF2) family protein / RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 458
Score = 156 bits (395), Expect = 9e-37
Identities = 121/404 (29%), Positives = 190/404 (46%), Gaps = 70/404 (17%)
Query: 12 PQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEY 71
P VG+AFV QYY I P+ + RFY + S + R +DG M +T I ++++ L Y
Sbjct: 13 PLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTY 72
Query: 72 TSFR-VEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQDKGFYVLNDVFR 130
E+ S D Q S+N G ++ VTG T + +RKF Q+FFLAPQ+KGF+VLND+ R
Sbjct: 73 GDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDILR 132
Query: 131 YVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPTAQTVIPPTQT 190
+V+ +DA ++ P EV+ + PT + ++
Sbjct: 133 FVN------------DDAKDNVPETI----------DGEVVSGINSTTPTIINGMKGSEQ 170
Query: 191 VIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKVASNTQE- 249
+ + KEVS PL+N + +NV+ V E ++ V E + ++VA ++Q+
Sbjct: 171 AACVSVNPVCKEVSKPLDNE--NAKDNVL----VPEIANEVARTE--ITCKEVADDSQKN 222
Query: 250 --------DTPKKSFASIVNALKDN-SAPFHLRASPAKPAVHPPRVHSVPAP-------- 292
D PKKS+AS++ KD P SP K + + H P+
Sbjct: 223 YDPDDGLADAPKKSYASVLKVTKDKFGVPAVSLPSPKK--IPKDQEHQAPSDPSTGQILK 280
Query: 293 --------------EAPTPNMDIPLEKNNEN---AGRAHAIFVANLPMSATVEQLDRAFK 335
E+ T + + +N N +I+V +LP +A ++ L+ FK
Sbjct: 281 DQGQQASSDPSQVIESDTVSESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEFK 340
Query: 336 KFGPIKRDGIQVRSNK--GSCFGFVEFESAASMQSALEVWSISI 377
+FG I GIQV + + G +GFVEFE A + A+E + I
Sbjct: 341 QFGAITNGGIQVINQRGLGYPYGFVEFEEADAAHRAIEASPVKI 384
>ref|XP_464011.1| putative Ras-GTPase activating protein SH3 domain-binding protein 2
[Oryza sativa (japonica cultivar-group)]
gi|41052569|dbj|BAD07751.1| putative Ras-GTPase
activating protein SH3 domain-binding protein 2 [Oryza
sativa (japonica cultivar-group)]
Length = 511
Score = 155 bits (393), Expect = 2e-36
Identities = 117/383 (30%), Positives = 191/383 (49%), Gaps = 38/383 (9%)
Query: 15 VGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEE-DGTMTTVTTTAEIDKKIQSLEYTS 73
VG F+ YY++L + PD VH+FY+D+S M R ++ GT TT +T +I I SL +T
Sbjct: 12 VGTYFLRNYYNLLQQSPDVVHQFYNDASTMVRVDDLAGTNTTASTMMDIHSLIMSLNFT- 70
Query: 74 FRVEVLSADAQPSYNNGVMVVVTGCL-TGTDNIKRKFAQSFFLAPQDKGFYVLNDVFRYV 132
++E+ +A+ S+ +GV+V+V+G + T + +RKF Q FFLAPQ+KG++VLND F +V
Sbjct: 71 -QIEIKTANFLNSWGDGVLVMVSGLVQTKEYSHQRKFIQMFFLAPQEKGYFVLNDYFHFV 129
Query: 133 DAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPE---VIPPTQTVIPTAQ--TVIPP 187
D + + ++ + + S +++ EPE +H E +P T + T P
Sbjct: 130 DEEQVQPAPVIAQDNFETNMASNSVV--EPEYIHEEENQSAVPITSEESDAVENYTYSEP 187
Query: 188 TQTVIADTET----IISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTSIEKV 243
Q V++ ++ + +E NG E PV HV+EP
Sbjct: 188 PQQVVSQSDNWGDEPLPEEPISSFTNGMAMAPEE--PVQSPPVPPPHVEEP--------- 236
Query: 244 ASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKP----AVHPPRVHSVPAPEAPT--P 297
+ KK++ASI+ K + +P +P + HSV T P
Sbjct: 237 ----VGEPVKKTYASILRTAKAPLVFPVAQPAPTRPHQATETNQAAQHSVMTSSVATEKP 292
Query: 298 NMDIPLEKNNENAGRAHAIFVANLPMSATVEQLDRAFKKFGPIKRDGIQVRSNK--GSCF 355
D+ E ++ + +++V N+P S + L+ FKKFG + DG+ +RS K G +
Sbjct: 293 KTDVYGEFAVQDDEESKSVYVGNVPSSVSEADLENEFKKFGRLIPDGVAIRSRKETGGYY 352
Query: 356 GFVEFESAASMQSALEVWSISIN 378
FVEFE + + +AL+ I IN
Sbjct: 353 AFVEFEELSGVHNALKASPIEIN 375
>gb|AAH45051.1| G3bp-prov protein [Xenopus laevis]
Length = 470
Score = 124 bits (312), Expect = 4e-27
Identities = 113/406 (27%), Positives = 172/406 (41%), Gaps = 52/406 (12%)
Query: 7 VQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGT---MTTVTTTAEID 63
++ P+P +VG FV QYY++L++ PD +HRFY SS D V +I
Sbjct: 3 MEKPSPLLVGREFVRQYYTLLNQAPDFLHRFYGKSSSYVHGGLDSNGKPADAVYGQTDIH 62
Query: 64 KKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQD---K 120
KK+ SL + R ++ DA + N+GV+V V G L+ R+F Q+F LAP+
Sbjct: 63 KKVMSLNFKDCRTKIRHVDAHATLNDGVVVQVMGELSNNRQPMRRFMQTFLLAPEGSVAN 122
Query: 121 GFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIPT 180
FYV ND+FRY D D ++ P ++DE A PE V E T P
Sbjct: 123 KFYVHNDIFRYQDEVFG-DSDTEPPEESDEEAEEPEERQQSPELVATDEA---TYYEQPG 178
Query: 181 AQTVIPPTQTVIADTETIISKEVSLP---LENGKLSVTENVIPVNHVKESSHHVKEPEQP 237
+ + P + I + E E+ +E +E P +E+ + K P P
Sbjct: 179 SNDLDEPLEDQIVEAEPEQEPELEQEPEMVEEKCEPTSEEPAPEEEEEETVNIEKSPSPP 238
Query: 238 TSIEKVASNTQEDTPKKSFASIVN-------ALKDNSAPFHL----------------RA 274
+ A QED S+AS+ + A+ + P H+ +
Sbjct: 239 PA--DPAPAVQEDPRTFSWASVTSKNLPPSGAVPVSGIPPHVVKVQTSQPRPDTKSEAQT 296
Query: 275 SPAKPAVHPPRVH----SVPAPEAPTPNMDIPLEKNNENAGR---AHAIFVANLPMSATV 327
+ +P RV +VP P P P + E R +H +FV NLP
Sbjct: 297 TTQRPPQRDQRVREQRTTVPPPRGPRPLREGEPESETRRINRYPDSHQLFVGNLPHDVDK 356
Query: 328 EQLDRAFKKFGPIKRDGIQVRSNKGS---CFGFVEFESAASMQSAL 370
+L F+ +G + +++R N G FGFV F+ A +Q L
Sbjct: 357 TELKEFFQTYGNV----VELRINSGGKLPNFGFVVFDDAEPVQKIL 398
>dbj|BAE00650.1| unnamed protein product [Macaca fascicularis]
Length = 445
Score = 123 bits (308), Expect = 1e-26
Identities = 112/402 (27%), Positives = 175/402 (42%), Gaps = 68/402 (16%)
Query: 7 VQTPTPQMVGNAFVEQYYSILHRDPDQVHRFY--HDSSVMSRPEEDGTMT-TVTTTAEID 63
++ P+P +VG FV QYY++L++ PD +HRFY + S V + +G V EI
Sbjct: 3 MEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIH 62
Query: 64 KKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQD---K 120
+K+ S +T+ ++ DA + N+GV+V V G L+ + R+F Q+F LAP+
Sbjct: 63 RKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVAN 122
Query: 121 GFYVLNDVFRYVD-AYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIP 179
FYV ND+FRY D + E ++ + P E TPE V+P
Sbjct: 123 KFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPE---------------VVP 167
Query: 180 TAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESS-HHVKEPEQPT 238
V D E + + V+ P + + + PV+ ++E V E P
Sbjct: 168 DDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQE--PVSEIQEEKPEPVLEETAPE 225
Query: 239 SIEK--------VASNTQEDTPKKSFASIVNALKDNSAPFHLRASPAKPAVH-PPRVHSV 289
+K +A QED S+AS+ + +L S A P PP V V
Sbjct: 226 DTQKSSSPAPADIAQTVQEDLRTFSWASVTSK--------NLPPSGAVPVTGIPPHVVKV 277
Query: 290 PA----PEAPTPNMDIPLEKNNENAGR--------------AHAIFVANLPMSATVEQLD 331
PA PE+ P IP ++ AG +H +F+ NLP +L
Sbjct: 278 PASQPRPES-KPESQIPPQRPIREAGEQGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELK 336
Query: 332 RAFKKFGPIKRDGIQVRSNKGS---CFGFVEFESAASMQSAL 370
F+ +G + +++R N G FGFV F+ + +Q L
Sbjct: 337 DFFQNYGNV----VELRINSGGKLPNFGFVVFDDSEPVQKVL 374
>ref|NP_001017046.1| hypothetical protein LOC549800 [Xenopus tropicalis]
gi|60618524|gb|AAH90584.1| Hypothetical protein
LOC549800 [Xenopus tropicalis]
Length = 474
Score = 122 bits (305), Expect = 2e-26
Identities = 121/413 (29%), Positives = 182/413 (43%), Gaps = 62/413 (15%)
Query: 7 VQTPTPQMVGNAFVEQYYSILHRDPDQVHRFYHDSS--VMSRPEEDGTMT-TVTTTAEID 63
++ P+P +VG FV QYY++L++ PD +HRFY SS V + +G V +I
Sbjct: 3 MEKPSPLLVGREFVRQYYTLLNQAPDFLHRFYGKSSSYVHGGLDTNGKPAEAVYGQTDIH 62
Query: 64 KKIQSLEYTSFRVEVLSADAQPSYNNGVMVVVTGCLTGTDNIKRKFAQSFFLAPQD---K 120
KK+ SL + R ++ DA + N+GV+V V G L+ R+F Q+F LAP+
Sbjct: 63 KKVMSLNFKDCRTKIRHVDAHATLNDGVVVQVMGELSNNRQPMRRFMQTFVLAPEGSVAN 122
Query: 121 GFYVLNDVFRYVDAYKSIDIESVPANDADESAPSEAIITPEPEPVHVPEVIPPTQTVIP- 179
FYV ND+FRY D D ++ P ++DE A + PE V E PT P
Sbjct: 123 KFYVHNDIFRYQDEVFG-DSDTEPPEESDEEAEEQEERQQSPEVVAADE---PTYYEQPG 178
Query: 180 TAQTVIPPTQTVIADTETIISKEVSLPLENGKLSVTENVIPVNHVKESSHHVKEPEQPTS 239
+ P + + D E +E E +V E PV+ E +E E+ +
Sbjct: 179 NNNDLDEPLEEQVVDAEP--EQEPEPEQEPEPEAVEEKCEPVS---EEPAPEEEEEETVA 233
Query: 240 IEK--------VASNTQEDTPKKSFASIVN-------ALKDNSAPFH---LRASPAKP-- 279
IE+ A QED S+AS+ + A+ + P H ++ S +P
Sbjct: 234 IERSPSPLPADPAPAVQEDPRTFSWASVTSKNLPPSGAVPVSGIPPHVVKVQTSQPRPDT 293
Query: 280 -------AVHPPRVH--------SVPAPEAPTPNMD-IPLEKNNENAGR---AHAIFVAN 320
A PP+ +VP P P P + P E R +H +FV N
Sbjct: 294 KSEAQTTAQRPPQRDQRIREQRTTVPPPRGPRPLREGEPGESETRRMNRYPDSHQLFVGN 353
Query: 321 LPMSATVEQLDRAFKKFGPIKRDGIQVRSNKGS---CFGFVEFESAASMQSAL 370
LP +L F+ +G + +++R N G FGFV F+ A +Q L
Sbjct: 354 LPHDVDKSELKEFFQTYGNV----VELRINSGGKLPNFGFVVFDDADPVQKIL 402
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 703,220,982
Number of Sequences: 2540612
Number of extensions: 31360450
Number of successful extensions: 110444
Number of sequences better than 10.0: 1678
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 1473
Number of HSP's that attempted gapping in prelim test: 105749
Number of HSP's gapped (non-prelim): 4045
length of query: 393
length of database: 863,360,394
effective HSP length: 130
effective length of query: 263
effective length of database: 533,080,834
effective search space: 140200259342
effective search space used: 140200259342
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC146567.10