BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146559.4 - phase: 0 /pseudo
(159 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR20786.1| At2g02230 [Arabidopsis thaliana] gi|58652100|gb|A... 128 6e-29
gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thal... 128 6e-29
ref|NP_973399.1| F-box family protein / SKP1 interacting partner... 121 7e-27
dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis... 115 4e-25
gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana] gi|152... 114 7e-25
gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thal... 112 3e-24
gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thal... 108 5e-23
gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|4831067... 108 6e-23
ref|XP_468354.1| phloem-specific lectin-like [Oryza sativa (japo... 103 1e-21
gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thal... 103 1e-21
ref|XP_468355.1| F-box family protein-like [Oryza sativa (japoni... 102 3e-21
gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidop... 101 8e-21
ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis... 101 8e-21
gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2... 101 8e-21
ref|XP_480119.1| putative F-box protein (SKP1 interacting partne... 98 6e-20
gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|... 97 2e-19
gb|AAC78510.1| putative phloem-specific lectin [Arabidopsis thal... 95 7e-19
gb|AAU29482.1| At1g56240 [Arabidopsis thaliana] gi|15223489|ref|... 94 9e-19
ref|XP_468361.1| F-box family protein-like [Oryza sativa (japoni... 94 9e-19
dbj|BAD93729.1| putative phloem-specific lectin [Arabidopsis tha... 93 3e-18
>gb|AAR20786.1| At2g02230 [Arabidopsis thaliana] gi|58652100|gb|AAW80875.1|
At2g02230 [Arabidopsis thaliana]
Length = 336
Score = 128 bits (321), Expect = 6e-29
Identities = 60/130 (46%), Positives = 91/130 (69%), Gaps = 7/130 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S + LPE CI+K++SHT+P D+C ++ V K SAA+SD VW+ FLPS+ S++ S
Sbjct: 30 SRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS-- 87
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
+ SKK ++L+L+D+ +++ENGKKSF +EK SG+K YMLSA +++I GD+P +
Sbjct: 88 -----ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAY 142
Query: 130 WDWPILPESR 139
W W +PES+
Sbjct: 143 WKWITVPESK 152
>gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226908|ref|NP_178331.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366259|pir||E84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 317
Score = 128 bits (321), Expect = 6e-29
Identities = 60/130 (46%), Positives = 91/130 (69%), Gaps = 7/130 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S + LPE CI+K++SHT+P D+C ++ V K SAA+SD VW+ FLPS+ S++ S
Sbjct: 30 SRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS-- 87
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
+ SKK ++L+L+D+ +++ENGKKSF +EK SG+K YMLSA +++I GD+P +
Sbjct: 88 -----ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAY 142
Query: 130 WDWPILPESR 139
W W +PES+
Sbjct: 143 WKWITVPESK 152
>ref|NP_973399.1| F-box family protein / SKP1 interacting partner 3-related
[Arabidopsis thaliana]
Length = 320
Score = 121 bits (303), Expect = 7e-27
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 8/145 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S +VLPE CI+ I+S T+P D+C + V K F SA SD VWD+FLP + S++S
Sbjct: 59 SPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVS---- 114
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
S +F+ SKK LY L +P++IE+GKKSF LEK SG++ MLS++++ I G +P++
Sbjct: 115 RSRVFA---SKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEY 171
Query: 130 WDWPILPESRCVNCVIDLVFITTFD 154
W W +PESR N + +L+ + F+
Sbjct: 172 WQWISIPESR-FNKIAELLDVCWFE 195
>dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis thaliana]
gi|15238574|ref|NP_197844.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
Length = 251
Score = 115 bits (288), Expect = 4e-25
Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 7/125 (5%)
Query: 15 LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
LPE CIA ++S T+P D+CR+S V K SAA S+T W+RFLPSD I +S S S
Sbjct: 6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFS-- 63
Query: 75 STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
K L+L + P++IE+G+ SF +EK+SG+K +MLSAR + I D+P+FW W
Sbjct: 64 -----NKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVS 118
Query: 135 LPESR 139
+P+SR
Sbjct: 119 IPDSR 123
>gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana]
gi|15226911|ref|NP_178332.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366262|pir||F84434 lectin-like protein [imported] -
Arabidopsis thaliana
Length = 305
Score = 114 bits (286), Expect = 7e-25
Identities = 60/131 (45%), Positives = 87/131 (65%), Gaps = 8/131 (6%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S+ + LPE CI+ I+S T+P D+C + V K F SA SD+VWD+FLPSD S++
Sbjct: 40 SLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLV----P 95
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLS-ARDISIALGDTPQ 128
S +FS SKK LY + D+P+++E+G KSF LEK++G+K +MLS + + I TPQ
Sbjct: 96 PSRVFS---SKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQ 152
Query: 129 FWDWPILPESR 139
+W W +PE+R
Sbjct: 153 YWRWISIPEAR 163
>gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226939|ref|NP_178341.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366249|pir||G84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 272
Score = 112 bits (280), Expect = 3e-24
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 4 KTEEAKSMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISI 63
+ + S + PE CI+ I+S T P D+C + V K F S KSD +W++FLP+D S+
Sbjct: 6 RVKSESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESL 65
Query: 64 ISDSPSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIAL 123
I S +FS SKK LY +L + P++ ++ KKS LEK SG++ MLSA ++SI
Sbjct: 66 IPPS----RVFS---SKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIW 118
Query: 124 GDTPQFWDWPILPESR 139
GD PQ+W W +PESR
Sbjct: 119 GDNPQYWQWIPIPESR 134
>gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226936|ref|NP_178339.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366261|pir||E84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 305
Score = 108 bits (270), Expect = 5e-23
Identities = 57/143 (39%), Positives = 91/143 (62%), Gaps = 6/143 (4%)
Query: 12 IEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSAS 71
++ LPE C++ I+S T+P D+C L+ V K F SA KSD VW++F+P + S+IS S +
Sbjct: 36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95
Query: 72 SLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWD 131
L SKK LY L D ++I++GKKS +EK + ++ M+SA +++IA G++PQ W
Sbjct: 96 FL-----SKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWR 150
Query: 132 WPILPESRCVNCVIDLVFITTFD 154
W P++R V +L+ + F+
Sbjct: 151 WIPDPQAR-FETVAELLEVCLFE 172
>gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|48310676|gb|AAT41865.1|
At1g80110 [Arabidopsis thaliana]
Length = 257
Score = 108 bits (269), Expect = 6e-23
Identities = 56/125 (44%), Positives = 78/125 (61%), Gaps = 7/125 (5%)
Query: 15 LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
LPE CIAKILS T P+D CRLS V F SAA SD VW+ FLP+D P+ +
Sbjct: 4 LPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF-------PAGFAAP 56
Query: 75 STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
+ P++K L+ +L D+P++I SF LE++SG K YM++AR ++I G ++W W
Sbjct: 57 AGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWIS 116
Query: 135 LPESR 139
LP +R
Sbjct: 117 LPNTR 121
>ref|XP_468354.1| phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)] gi|47848218|dbj|BAD22044.1|
phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)] gi|47848532|dbj|BAD22384.1|
phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)]
Length = 332
Score = 103 bits (258), Expect = 1e-21
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 8 AKSMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDS 67
A + I LPE C+A +S T P D+C S V F +AA SD VWD FLP D +I++ +
Sbjct: 7 AAAEIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARA 66
Query: 68 PSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTP 127
+ SKK L+ L P+++++ SF L+++SG K MLSAR +SIA GD P
Sbjct: 67 DDGIAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDP 126
Query: 128 QFWDW-PILPESR 139
W W P LP SR
Sbjct: 127 SRWRWTPGLPGSR 139
>gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226931|ref|NP_178337.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366256|pir||C84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 307
Score = 103 bits (258), Expect = 1e-21
Identities = 53/129 (41%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S + LPE CI+ I+S T+P D C + V K F A + D++W++FLPS+ S+I
Sbjct: 43 SPFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPP--- 99
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
+ SKK LY TL P+++E+GKKSF LE SG+K +L+A+++ I G+ P++
Sbjct: 100 ----WRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEY 155
Query: 130 WDWPILPES 138
W W L ES
Sbjct: 156 WQWIELCES 164
>ref|XP_468355.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|47848533|dbj|BAD22385.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 479
Score = 102 bits (255), Expect = 3e-21
Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 7/139 (5%)
Query: 3 MKTEEAKSMIEV--LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDL 60
M+ E A + E+ LPE + LS T+P D+C + VC+ F +AA SD VW RFLP DL
Sbjct: 1 MEEEAAAAACEIARLPEELLVAALSLTSPRDACSAAAVCRDFRAAADSDAVWSRFLPRDL 60
Query: 61 ISIISDSPSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDIS 120
+ L PS K L+L LS P+++ + S LE++ G K YMLSAR +
Sbjct: 61 PRLAD-----GELSPPPPSTKGLFLRLSAAPLLLPHELTSMWLEREKGGKCYMLSARALQ 115
Query: 121 IALGDTPQFWDWPILPESR 139
I GDTP++W W L +SR
Sbjct: 116 ITWGDTPRYWRWIPLTDSR 134
Score = 35.8 bits (81), Expect = 0.39
Identities = 22/67 (32%), Positives = 37/67 (54%), Gaps = 9/67 (13%)
Query: 56 LPSDLISIISDSPSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLS 115
L S+ ++ + PS S L ++ SK+ ++LT +G S L+ ++G K YMLS
Sbjct: 275 LTSNCLACSHEKPSYSLLTTSRSSKEEIFLT---------DGLTSMWLDMETGFKCYMLS 325
Query: 116 ARDISIA 122
AR + +A
Sbjct: 326 ARALQLA 332
>gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidopsis thaliana]
Length = 288
Score = 101 bits (251), Expect = 8e-21
Identities = 55/126 (43%), Positives = 76/126 (59%), Gaps = 4/126 (3%)
Query: 14 VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
+LPE C+A ILS T P D+ + V F A SD VW++FLP+D +IS S +
Sbjct: 1 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 60
Query: 74 FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
FS SKK LY L + I+I+NG+K F++EK SG+ Y+LS+RD+SI D +W W
Sbjct: 61 FS---SKKELYRCLCE-SILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWS 116
Query: 134 ILPESR 139
+SR
Sbjct: 117 PRSDSR 122
>ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis thaliana]
Length = 289
Score = 101 bits (251), Expect = 8e-21
Identities = 55/126 (43%), Positives = 76/126 (59%), Gaps = 4/126 (3%)
Query: 14 VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
+LPE C+A ILS T P D+ + V F A SD VW++FLP+D +IS S +
Sbjct: 2 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61
Query: 74 FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
FS SKK LY L + I+I+NG+K F++EK SG+ Y+LS+RD+SI D +W W
Sbjct: 62 FS---SKKELYRCLCE-SILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWS 117
Query: 134 ILPESR 139
+SR
Sbjct: 118 PRSDSR 123
>gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2 gb|Z17331 from
Cucubita maxima. [Arabidopsis thaliana]
gi|25366264|pir||G86223 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 288
Score = 101 bits (251), Expect = 8e-21
Identities = 55/126 (43%), Positives = 76/126 (59%), Gaps = 4/126 (3%)
Query: 14 VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
+LPE C+A ILS T P D+ + V F A SD VW++FLP+D +IS S +
Sbjct: 1 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 60
Query: 74 FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
FS SKK LY L + I+I+NG+K F++EK SG+ Y+LS+RD+SI D +W W
Sbjct: 61 FS---SKKELYRCLCE-SILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWS 116
Query: 134 ILPESR 139
+SR
Sbjct: 117 PRSDSR 122
>ref|XP_480119.1| putative F-box protein (SKP1 interacting partner 3-related) [Oryza
sativa (japonica cultivar-group)]
gi|28812128|dbj|BAC64996.1| putative F-box protein (SKP1
interacting partner 3-related) [Oryza sativa (japonica
cultivar-group)]
Length = 299
Score = 98.2 bits (243), Expect = 6e-20
Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 15 LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSD--LISIISDSPSASS 72
LPE C+A +++ T+P D+CRL+ V F +AA+SD VWDRFLP D I+ + P+ ++
Sbjct: 23 LPEACLADVIALTSPRDACRLAAVSPSFRAAAESDAVWDRFLPPDYRAIAPLPPPPATAA 82
Query: 73 LFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDW 132
KK +YL L D P+ +++G LEK+SG K + L AR +S+ D W W
Sbjct: 83 ASGGKRMKKGVYLGLCDKPVPVDDGSMMVWLEKESGAKCFALPARKLSLPWEDGEFSWRW 142
Query: 133 PILPESRCVNCVIDLVFITTFD 154
P SR V LV T D
Sbjct: 143 TPHPLSRFEE-VAQLVDCTCLD 163
>gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|NP_176021.1| SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|12321747|gb|AAG50907.1| hypothetical protein
[Arabidopsis thaliana] gi|25366254|pir||B96604
hypothetical protein F14G9.14 [imported] - Arabidopsis
thaliana gi|51969496|dbj|BAD43440.1| hypothetical
protein [Arabidopsis thaliana]
Length = 282
Score = 96.7 bits (239), Expect = 2e-19
Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 14 VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
+LPE CIA IL+ T+P D+ S V F A SD VW++FLPSD S+IS S
Sbjct: 3 MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWN 62
Query: 74 FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
S SKK +Y L D ++I+N +K F++ K SG+ Y+LSARDISI D +W W
Sbjct: 63 IS---SKKEIYRCLCD-SLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWS 118
Query: 134 ILPESR 139
+ +SR
Sbjct: 119 NVSDSR 124
>gb|AAC78510.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|25366267|pir||G84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 265
Score = 94.7 bits (234), Expect = 7e-19
Identities = 54/126 (42%), Positives = 76/126 (59%), Gaps = 7/126 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S + LPE CI+ I+S T P D+C + V K F SA +SD+VW++FLP D S++ +S
Sbjct: 11 SPFDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES-- 68
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
SKK L +L P++IE GKKSF L+K SG K MLS + + I+ ++PQF
Sbjct: 69 -----RVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
Query: 130 WDWPIL 135
+ P L
Sbjct: 124 EEVPEL 129
>gb|AAU29482.1| At1g56240 [Arabidopsis thaliana] gi|15223489|ref|NP_176020.1| SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|45773796|gb|AAS76702.1| At1g56240 [Arabidopsis
thaliana] gi|12321750|gb|AAG50910.1| hypothetical
protein [Arabidopsis thaliana] gi|25366251|pir||A96604
hypothetical protein F14G9.15 [imported] - Arabidopsis
thaliana
Length = 284
Score = 94.4 bits (233), Expect = 9e-19
Identities = 54/126 (42%), Positives = 75/126 (58%), Gaps = 4/126 (3%)
Query: 14 VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
+LPE C+A IL+ T+P D+ S V F A SD VW++FLPS S+IS S +
Sbjct: 3 MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62
Query: 74 FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
FS SKK +Y L D ++I+N +K F++ K SG+ Y+LSARDISI D + W
Sbjct: 63 FS---SKKEIYRCLCD-SLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWS 118
Query: 134 ILPESR 139
+ +SR
Sbjct: 119 NVSDSR 124
>ref|XP_468361.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|51964510|ref|XP_507040.1| PREDICTED OSJNBa0053L11.25
gene product [Oryza sativa (japonica cultivar-group)]
gi|47848539|dbj|BAD22391.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
gi|47847859|dbj|BAD21652.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 297
Score = 94.4 bits (233), Expect = 9e-19
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 6 EEAKSMIEV--LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISI 63
EE + + E+ LPE ++ +S +P D+C + V F +AA SD VW FLP +L +
Sbjct: 3 EEGEGLCEIARLPEELLSAAISRASPRDACHAAAVSPAFRAAADSDAVWASFLPRNLPDL 62
Query: 64 ISDSPSASSLFSTSP-SKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIA 122
A S +P SKK L+L LSD P ++ + S L++++G K YMLSAR + I
Sbjct: 63 ------ADGELSPAPASKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVII 116
Query: 123 LGDTPQFWDWPILPESR 139
GDTP +W W L +SR
Sbjct: 117 WGDTPHYWRWIPLTDSR 133
>dbj|BAD93729.1| putative phloem-specific lectin [Arabidopsis thaliana]
Length = 123
Score = 92.8 bits (229), Expect = 3e-18
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 10 SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
S + LPE CI+ I+S T P D+C + V K F SA +SD+VW++FLP D S++ +S
Sbjct: 11 SPFDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES-- 68
Query: 70 ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
SKK L +L P++IE GKKSF L+K SG K MLS + + ++ ++PQF
Sbjct: 69 -----RVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVVSWVNSPQF 123
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,001,357
Number of Sequences: 2540612
Number of extensions: 9835781
Number of successful extensions: 24236
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 24099
Number of HSP's gapped (non-prelim): 132
length of query: 159
length of database: 863,360,394
effective HSP length: 117
effective length of query: 42
effective length of database: 566,108,790
effective search space: 23776569180
effective search space used: 23776569180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC146559.4