BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146559.3 + phase: 0
(130 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|4831067... 134 5e-31
gb|AAR20786.1| At2g02230 [Arabidopsis thaliana] gi|58652100|gb|A... 125 2e-28
gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thal... 125 2e-28
gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thal... 124 5e-28
dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis... 121 4e-27
ref|NP_973399.1| F-box family protein / SKP1 interacting partner... 120 6e-27
gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thal... 120 1e-26
ref|XP_468355.1| F-box family protein-like [Oryza sativa (japoni... 118 4e-26
ref|XP_468361.1| F-box family protein-like [Oryza sativa (japoni... 118 4e-26
gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana] gi|152... 117 8e-26
ref|XP_468354.1| phloem-specific lectin-like [Oryza sativa (japo... 115 2e-25
ref|XP_480119.1| putative F-box protein (SKP1 interacting partne... 108 4e-23
gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidop... 107 5e-23
ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis... 107 5e-23
gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2... 107 5e-23
gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|... 103 9e-22
gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thal... 101 5e-21
gb|AAO11661.1| hypothetical protein [Arabidopsis thaliana] 97 7e-20
gb|AAT69218.1| hypothetical protein At2g02320 [Arabidopsis thali... 97 7e-20
ref|XP_468359.1| F-box family protein-like [Oryza sativa (japoni... 97 1e-19
>gb|AAK93595.1| unknown protein [Arabidopsis thaliana] gi|48310676|gb|AAT41865.1|
At1g80110 [Arabidopsis thaliana]
Length = 257
Score = 134 bits (337), Expect = 5e-31
Identities = 65/124 (52%), Positives = 87/124 (69%), Gaps = 3/124 (2%)
Query: 4 IQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLT 63
+ +LPE CIA I+S TTPLD RLS S FRSA+ SD VWN FLP+D + + L
Sbjct: 1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPAGFAAPAGL- 59
Query: 64 NIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISM 123
PT+K L+ +L D P++I+ S LERKSG KCYM++AR+L IVWG ++RYW+WIS+
Sbjct: 60 --PTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISL 117
Query: 124 PDSR 127
P++R
Sbjct: 118 PNTR 121
>gb|AAR20786.1| At2g02230 [Arabidopsis thaliana] gi|58652100|gb|AAW80875.1|
At2g02230 [Arabidopsis thaliana]
Length = 336
Score = 125 bits (315), Expect = 2e-28
Identities = 57/121 (47%), Positives = 86/121 (70%), Gaps = 3/121 (2%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNIP 66
LPE CI+ ++S T+P DA ++ SK+ +SA+ SD VW FLPS+ SS++ S N
Sbjct: 35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS---ANHL 91
Query: 67 TKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDS 126
+KK+++L+L+D V++++ KKS +E+ SGKKCYMLSA L I+WGD YW WI++P+S
Sbjct: 92 SKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPES 151
Query: 127 R 127
+
Sbjct: 152 K 152
>gb|AAC78508.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226908|ref|NP_178331.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366259|pir||E84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 317
Score = 125 bits (315), Expect = 2e-28
Identities = 57/121 (47%), Positives = 86/121 (70%), Gaps = 3/121 (2%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNIP 66
LPE CI+ ++S T+P DA ++ SK+ +SA+ SD VW FLPS+ SS++ S N
Sbjct: 35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS---ANHL 91
Query: 67 TKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDS 126
+KK+++L+L+D V++++ KKS +E+ SGKKCYMLSA L I+WGD YW WI++P+S
Sbjct: 92 SKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPES 151
Query: 127 R 127
+
Sbjct: 152 K 152
>gb|AAC78518.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226939|ref|NP_178341.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366249|pir||G84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 272
Score = 124 bits (311), Expect = 5e-28
Identities = 59/120 (49%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Query: 8 PEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNIPT 67
PE CI+ I+S T P DA + SKTF S SD +W +FLP+D S+I P +
Sbjct: 18 PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLI---PPSRVFSS 74
Query: 68 KKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSR 127
KK+LY +L + PV+ D DKKS+ LE+ SGK+C MLSA +L+I+WGD+ +YW WI +P+SR
Sbjct: 75 KKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESR 134
>dbj|BAB11208.1| phloem-specific lectin-like protein [Arabidopsis thaliana]
gi|15238574|ref|NP_197844.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
Length = 251
Score = 121 bits (303), Expect = 4e-27
Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
DLPE CIA ++S T+P DA R+S SK RSA+DS+ W +FLPSD I +S S +
Sbjct: 5 DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFS- 63
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
K L+L + P++I+ + S +E++SGKKC+MLSAR L IVW D +W W+S+PD
Sbjct: 64 --NKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPD 121
Query: 126 SR 127
SR
Sbjct: 122 SR 123
>ref|NP_973399.1| F-box family protein / SKP1 interacting partner 3-related
[Arabidopsis thaliana]
Length = 320
Score = 120 bits (302), Expect = 6e-27
Identities = 60/121 (49%), Positives = 79/121 (64%), Gaps = 3/121 (2%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNIP 66
LPE CI+ I+S T+P DA + SKTF SA SD VW++FLP + S++S S +
Sbjct: 64 LPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFAS-- 121
Query: 67 TKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDS 126
KK+LY AL PV+I+ KKS LE+ SGK+C MLS++ L I WG YW WIS+P+S
Sbjct: 122 -KKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPES 180
Query: 127 R 127
R
Sbjct: 181 R 181
>gb|AAC78516.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226936|ref|NP_178339.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366261|pir||E84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 305
Score = 120 bits (300), Expect = 1e-26
Identities = 59/127 (46%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 60
+ E+ DLPE C++ IVS T+P DA L+ SKTF SA SD VW +F+P + S+IS S
Sbjct: 33 VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92
Query: 61 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 120
+ + +KK+LY AL D+ V+ID KKS+ +E+ + K+C M+SA +LAI WG+ + W W
Sbjct: 93 AFKFL-SKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRW 151
Query: 121 ISMPDSR 127
I P +R
Sbjct: 152 IPDPQAR 158
>ref|XP_468355.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|47848533|dbj|BAD22385.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 479
Score = 118 bits (295), Expect = 4e-26
Identities = 60/126 (47%), Positives = 81/126 (63%), Gaps = 1/126 (0%)
Query: 3 EIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSL 62
EI LPE + A +S T+P DA + + FR+A+DSDAVW++FLP D+ + S
Sbjct: 11 EIARLPEELLVAALSLTSPRDACSAAAVCRDFRAAADSDAVWSRFLPRDLPRLADGELSP 70
Query: 63 TNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWIS 122
P+ K L+L LS P+++ H+ S+ LER+ G KCYMLSAR+L I WGD RYW WI
Sbjct: 71 PP-PSTKGLFLRLSAAPLLLPHELTSMWLEREKGGKCYMLSARALQITWGDTPRYWRWIP 129
Query: 123 MPDSRL 128
+ DSRL
Sbjct: 130 LTDSRL 135
Score = 32.0 bits (71), Expect = 3.4
Identities = 22/76 (28%), Positives = 36/76 (46%), Gaps = 7/76 (9%)
Query: 48 LPSDISSIISHSPSLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSL 107
L S+ + PS + + T + S + + S+ L+ ++G KCYMLSAR+L
Sbjct: 275 LTSNCLACSHEKPSYSLLTTSRS-----SKEEIFLTDGLTSMWLDMETGFKCYMLSARAL 329
Query: 108 AIVWGDDRRYWNWISM 123
+ D W IS+
Sbjct: 330 QLANSTDT--WRLISL 343
>ref|XP_468361.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|51964510|ref|XP_507040.1| PREDICTED OSJNBa0053L11.25
gene product [Oryza sativa (japonica cultivar-group)]
gi|47848539|dbj|BAD22391.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
gi|47847859|dbj|BAD21652.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 297
Score = 118 bits (295), Expect = 4e-26
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSI----I 56
+ EI LPE ++A +SR +P DA + S FR+A+DSDAVW FLP ++ + +
Sbjct: 8 LCEIARLPEELLSAAISRASPRDACHAAAVSPAFRAAADSDAVWASFLPRNLPDLADGEL 67
Query: 57 SHSPSLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRR 116
S +P+ +KK+L+L LSD P ++ S+ L+R++G KCYMLSARSL I+WGD
Sbjct: 68 SPAPA-----SKKELFLRLSDGPYLLSDRLMSMWLDRETGAKCYMLSARSLVIIWGDTPH 122
Query: 117 YWNWISMPDSRLA 129
YW WI + DSR A
Sbjct: 123 YWRWIPLTDSRFA 135
>gb|AAC78509.1| lectin-like protein [Arabidopsis thaliana]
gi|15226911|ref|NP_178332.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366262|pir||F84434 lectin-like protein [imported] -
Arabidopsis thaliana
Length = 305
Score = 117 bits (292), Expect = 8e-26
Identities = 58/123 (47%), Positives = 85/123 (68%), Gaps = 4/123 (3%)
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
+LPE CI+ I+S T+P DA + SKTF SA +SD+VW++FLPSD SS++ P
Sbjct: 44 NLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLV---PPSRVF 100
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLS-ARSLAIVWGDDRRYWNWISMP 124
+KK+LY A+ D PV+++ KS LE+++GKKC+MLS +S+ I W +YW WIS+P
Sbjct: 101 SSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIP 160
Query: 125 DSR 127
++R
Sbjct: 161 EAR 163
>ref|XP_468354.1| phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)] gi|47848218|dbj|BAD22044.1|
phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)] gi|47848532|dbj|BAD22384.1|
phloem-specific lectin-like [Oryza sativa (japonica
cultivar-group)]
Length = 332
Score = 115 bits (289), Expect = 2e-25
Identities = 61/130 (46%), Positives = 81/130 (61%), Gaps = 5/130 (3%)
Query: 3 EIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP-- 60
EI LPE C+A +S TTP DA S S FR+A+DSDAVW+ FLP D ++I++ +
Sbjct: 10 EIYRLPEECVAYAISMTTPGDACHSSAVSPAFRAAADSDAVWDSFLPPDHAAILARADDG 69
Query: 61 --SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYW 118
+ +KKDL+ L RPV++D S L+R+SG KC MLSAR+L+I WGDD W
Sbjct: 70 IAAAGECASKKDLFARLCGRPVLLDDATMSFGLDRRSGAKCVMLSARALSIAWGDDPSRW 129
Query: 119 NWI-SMPDSR 127
W +P SR
Sbjct: 130 RWTPGLPGSR 139
>ref|XP_480119.1| putative F-box protein (SKP1 interacting partner 3-related) [Oryza
sativa (japonica cultivar-group)]
gi|28812128|dbj|BAC64996.1| putative F-box protein (SKP1
interacting partner 3-related) [Oryza sativa (japonica
cultivar-group)]
Length = 299
Score = 108 bits (269), Expect = 4e-23
Identities = 54/132 (40%), Positives = 77/132 (57%), Gaps = 6/132 (4%)
Query: 2 TEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPS 61
T + DLPE C+A +++ T+P DA RL+ S +FR+A++SDAVW++FLP D +I P
Sbjct: 18 TRVGDLPEACLADVIALTSPRDACRLAAVSPSFRAAAESDAVWDRFLPPDYRAIAPLPPP 77
Query: 62 LTNIPT------KKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDR 115
KK +YL L D+PV +D + LE++SG KC+ L AR L++ W D
Sbjct: 78 PATAAASGGKRMKKGVYLGLCDKPVPVDDGSMMVWLEKESGAKCFALPARKLSLPWEDGE 137
Query: 116 RYWNWISMPDSR 127
W W P SR
Sbjct: 138 FSWRWTPHPLSR 149
>gb|AAM64609.1| phloem-specific lectin PP2-like protein [Arabidopsis thaliana]
Length = 288
Score = 107 bits (268), Expect = 5e-23
Identities = 55/124 (44%), Positives = 76/124 (60%), Gaps = 2/124 (1%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI- 65
LPE C+A I+S TTP D + S FR A DSD VW +FLP+D +IS S I
Sbjct: 2 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIF 61
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+LY L + ++ID+ +K ++E+ SGK Y+LS+R L+I W D R YW+W D
Sbjct: 62 SSKKELYRCLCES-ILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSD 120
Query: 126 SRLA 129
SR +
Sbjct: 121 SRFS 124
>ref|NP_563837.1| SKP1 interacting partner 3-related [Arabidopsis thaliana]
Length = 289
Score = 107 bits (268), Expect = 5e-23
Identities = 55/124 (44%), Positives = 76/124 (60%), Gaps = 2/124 (1%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI- 65
LPE C+A I+S TTP D + S FR A DSD VW +FLP+D +IS S I
Sbjct: 3 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIF 62
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+LY L + ++ID+ +K ++E+ SGK Y+LS+R L+I W D R YW+W D
Sbjct: 63 SSKKELYRCLCES-ILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSD 121
Query: 126 SRLA 129
SR +
Sbjct: 122 SRFS 125
>gb|AAC24090.1| Contains similarity to phloem-specific lectin PP2 gb|Z17331 from
Cucubita maxima. [Arabidopsis thaliana]
gi|25366264|pir||G86223 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 288
Score = 107 bits (268), Expect = 5e-23
Identities = 55/124 (44%), Positives = 76/124 (60%), Gaps = 2/124 (1%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI- 65
LPE C+A I+S TTP D + S FR A DSD VW +FLP+D +IS S I
Sbjct: 2 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIF 61
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+LY L + ++ID+ +K ++E+ SGK Y+LS+R L+I W D R YW+W D
Sbjct: 62 SSKKELYRCLCES-ILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSD 120
Query: 126 SRLA 129
SR +
Sbjct: 121 SRFS 124
>gb|AAQ62432.1| At1g56250 [Arabidopsis thaliana] gi|15223490|ref|NP_176021.1| SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|12321747|gb|AAG50907.1| hypothetical protein
[Arabidopsis thaliana] gi|25366254|pir||B96604
hypothetical protein F14G9.14 [imported] - Arabidopsis
thaliana gi|51969496|dbj|BAD43440.1| hypothetical
protein [Arabidopsis thaliana]
Length = 282
Score = 103 bits (257), Expect = 9e-22
Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 7 LPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPS-LTNI 65
LPE CIA I++ T+P DA S S FR A DSD VW +FLPSD S+IS S NI
Sbjct: 4 LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK++Y L D ++ID+ +K ++ + SGK Y+LSAR ++I D YW+W ++ D
Sbjct: 64 SSKKEIYRCLCD-SLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSD 122
Query: 126 SRLA 129
SR +
Sbjct: 123 SRFS 126
>gb|AAC78514.1| putative phloem-specific lectin [Arabidopsis thaliana]
gi|15226931|ref|NP_178337.1| F-box family protein / SKP1
interacting partner 3-related [Arabidopsis thaliana]
gi|25366256|pir||C84435 probable phloem-specific lectin
[imported] - Arabidopsis thaliana
Length = 307
Score = 101 bits (251), Expect = 5e-21
Identities = 52/121 (42%), Positives = 73/121 (59%), Gaps = 3/121 (2%)
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
DLPE CI+ I+S T+P D + SK+F A D++W +FLPS+ S+I P
Sbjct: 47 DLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLI---PPWRVF 103
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KKDLY L PV+++ KKS LE SGKKC +L+A+ L I G++ YW WI + +
Sbjct: 104 SSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCE 163
Query: 126 S 126
S
Sbjct: 164 S 164
>gb|AAO11661.1| hypothetical protein [Arabidopsis thaliana]
Length = 307
Score = 97.4 bits (241), Expect = 7e-20
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
DLPE CI+ I+S T+P DA ++ SKTF SA SD VW +F+P + S++S S +
Sbjct: 42 DLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRS---QHF 98
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+L+ AL D V+I+ KK + +E+ +GK+C MLSA +L + W WI+ P
Sbjct: 99 SSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITNPV 155
Query: 126 S 126
S
Sbjct: 156 S 156
>gb|AAT69218.1| hypothetical protein At2g02320 [Arabidopsis thaliana]
gi|3894165|gb|AAC78515.1| hypothetical protein
[Arabidopsis thaliana] gi|15226933|ref|NP_178338.1|
F-box family protein / SKP1 interacting partner
3-related [Arabidopsis thaliana] gi|25366257|pir||D84435
hypothetical protein At2g02320 [imported] - Arabidopsis
thaliana
Length = 307
Score = 97.4 bits (241), Expect = 7e-20
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
DLPE CI+ I+S T+P DA ++ SKTF SA SD VW +F+P + S++S S +
Sbjct: 42 DLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRS---QHF 98
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+L+ AL D V+I+ KK + +E+ +GK+C MLSA +L + W WI+ P
Sbjct: 99 SSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNL---STHHTWKWITNPV 155
Query: 126 S 126
S
Sbjct: 156 S 156
>ref|XP_468359.1| F-box family protein-like [Oryza sativa (japonica cultivar-group)]
gi|47848537|dbj|BAD22389.1| F-box family protein-like
[Oryza sativa (japonica cultivar-group)]
Length = 236
Score = 96.7 bits (239), Expect = 1e-19
Identities = 54/130 (41%), Positives = 77/130 (58%), Gaps = 15/130 (11%)
Query: 3 EIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSI----ISH 58
EI LPE + ++S T P DA R +A+DSDAVW++FLP + + +
Sbjct: 10 EIARLPEELLVEVLSLTGPRDASR---------AAADSDAVWSRFLPRGLPRLARRELPR 60
Query: 59 SPSLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYW 118
SP P++K +L LS P+++ S+ L+R+ G KCYMLSAR+L I WGD +YW
Sbjct: 61 SPPPP--PSRKAHFLRLSAGPLLLPRKLMSMWLDREKGAKCYMLSARALQISWGDSPQYW 118
Query: 119 NWISMPDSRL 128
+WI + DSRL
Sbjct: 119 SWIPLADSRL 128
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,583,310
Number of Sequences: 2540612
Number of extensions: 7705331
Number of successful extensions: 20245
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 20128
Number of HSP's gapped (non-prelim): 90
length of query: 130
length of database: 863,360,394
effective HSP length: 106
effective length of query: 24
effective length of database: 594,055,522
effective search space: 14257332528
effective search space used: 14257332528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146559.3