BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146557.6 - phase: 0 /pseudo
(487 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195102.2| tRNA synthetase class II (D, K and N) family pr... 477 e-133
emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis tha... 469 e-131
ref|NP_909299.1| putative aspartate--tRNA ligase [Oryza sativa (... 419 e-116
dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis tha... 389 e-106
ref|XP_550178.1| putative aspartyl-tRNA synthetase [Oryza sativa... 354 3e-96
ref|ZP_00326022.1| COG0173: Aspartyl-tRNA synthetase [Trichodesm... 341 3e-92
ref|ZP_00159611.2| COG0173: Aspartyl-tRNA synthetase [Anabaena v... 337 4e-91
sp|Q8YUB6|SYD_ANASP Aspartyl-tRNA synthetase (Aspartate--tRNA li... 336 1e-90
ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus e... 326 1e-87
ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC... 325 3e-87
ref|ZP_00164407.1| COG0173: Aspartyl-tRNA synthetase [Synechococ... 325 3e-87
ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongat... 323 7e-87
ref|ZP_00110043.1| COG0173: Aspartyl-tRNA synthetase [Nostoc pun... 323 1e-86
ref|ZP_00333349.1| COG0173: Aspartyl-tRNA synthetase [Thiobacill... 267 5e-70
ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreduc... 248 4e-64
gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biov... 236 2e-60
emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea ... 234 3e-60
gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivali... 225 2e-57
ref|ZP_00291933.1| COG0173: Aspartyl-tRNA synthetase [Thermobifi... 223 8e-57
gb|AAO10541.1| Aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6... 223 1e-56
>ref|NP_195102.2| tRNA synthetase class II (D, K and N) family protein [Arabidopsis
thaliana]
Length = 664
Score = 477 bits (1228), Expect = e-133
Identities = 259/472 (54%), Positives = 321/472 (67%), Gaps = 44/472 (9%)
Query: 45 KPKPLNQS-LQWISRTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQV 103
KP P S L+W+SRT CGELS NDVGK V LCGW LHR GG+ FL LRD TGI+QV
Sbjct: 61 KPVPSPPSVLRWVSRTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQV 120
Query: 104 KTRLDEFPVAHSANKNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRN 163
+T DEFP AH ++R EYV ++G VRSR +S+N +MKTGF+EV A V+ LN
Sbjct: 121 RTLPDEFPEAHGLINDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVR 180
Query: 164 AKLTLIPELNSDDAEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGF 223
KL + +D+ + EEIRLR+RCLDLR+QQM +NI+LRHNVVKLIRRYLED HGF
Sbjct: 181 TKLPFLVT-TADENKDLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRYLEDRHGF 239
Query: 224 VE-----------------------------------PCHKALRYISKC*W*LVLINIIK 248
+E K + +S + +
Sbjct: 240 IEIETPILSRSTPEGARDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFR 299
Query: 249 *QDLRAVHDRQPEFTQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAE 308
+DLRA DRQPEFTQLDMEMAF P+ED+L LNE+LIRKVF EIKG++LP+PFPRLTYA+
Sbjct: 300 DEDLRA--DRQPEFTQLDMEMAFMPMEDMLKLNEDLIRKVFSEIKGIQLPDPFPRLTYAD 357
Query: 309 AMNRYGSDHPDTRFDLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL- 367
AM+RYGSD PDTRFDLELKDVS++F+ +SF++F+++LE GG+IKVLCVP GA K S
Sbjct: 358 AMDRYGSDRPDTRFDLELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSAL 417
Query: 368 ---DIYNEAEKYGAKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILF 423
DIYNEA K GAKGL L + NG I G ++LVSS+DSA +++C A P DLILF
Sbjct: 418 KKGDIYNEAMKSGAKGLPFLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILF 477
Query: 424 HAGHHASVNKTLGHLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
G SVNKTL LR++VAH + LIDH+KHSILW+TDFPMF+W++ +QRLE
Sbjct: 478 GVGPVTSVNKTLDRLRLFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLE 529
>emb|CAB80093.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
gi|3549678|emb|CAA20589.1| putative aspartate--tRNA
ligase [Arabidopsis thaliana] gi|7437605|pir||T04993
probable aspartate-tRNA ligase (EC 6.1.1.12) T16L1.250 -
Arabidopsis thaliana
Length = 636
Score = 469 bits (1208), Expect = e-131
Identities = 257/448 (57%), Positives = 315/448 (69%), Gaps = 24/448 (5%)
Query: 45 KPKPLNQS-LQWISRTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQV 103
KP P S L+W+SRT CGELS NDVGK V LCGW LHR GG+ FL LRD TGI+QV
Sbjct: 61 KPVPSPPSVLRWVSRTELCGELSVNDVGKRVHLCGWVALHRVHGGLTFLNLRDHTGIVQV 120
Query: 104 KTRLDEFPVAHSANKNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRN 163
+T DEFP AH ++R EYV ++G VRSR +S+N +MKTGF+EV A V+ LN
Sbjct: 121 RTLPDEFPEAHGLINDMRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVR 180
Query: 164 AKLTLIPELNSDDAEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGF 223
KL + +D+ + EEIRLR+RCLDLR+QQM +NI+LRHNVVKLIRRYLED HGF
Sbjct: 181 TKLPFL-VTTADENKDLIKEEIRLRFRCLDLRRQQMKNNIVLRHNVVKLIRRYLEDRHGF 239
Query: 224 VE-----------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEFTQLDMEMAFT 272
+E K + +S + + +DLRA DRQPEFTQLDMEMAF
Sbjct: 240 IESGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRA--DRQPEFTQLDMEMAFM 297
Query: 273 PLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRFDLELKDVSDI 332
P+ED+L LNE+LIRKVF EIKG++LP+PFPRLTYA+AM+RYGSD PDTRFDLELKDV
Sbjct: 298 PMEDMLKLNEDLIRKVFSEIKGIQLPDPFPRLTYADAMDRYGSDRPDTRFDLELKDV--- 354
Query: 333 FSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL----DIYNEAEKYGAKGLTTLWITK 388
TS+ +F+++LE GG+IKVLCVP GA K S DIYNEA K GAKGL L +
Sbjct: 355 ILSTSW-VFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKSGAKGLPFLKVLD 413
Query: 389 NG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLRVYVAHKLG 447
NG I G ++LVSS+DSA +++C A P DLILF G SVNKTL LR++VAH +
Sbjct: 414 NGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLDRLRLFVAHDMD 473
Query: 448 LIDHAKHSILWITDFPMFKWDDSKQRLE 475
LIDH+KHSILW+TDFPMF+W++ +QRLE
Sbjct: 474 LIDHSKHSILWVTDFPMFEWNEPEQRLE 501
>ref|NP_909299.1| putative aspartate--tRNA ligase [Oryza sativa (japonica
cultivar-group)]
Length = 651
Score = 419 bits (1078), Expect = e-116
Identities = 231/441 (52%), Positives = 292/441 (65%), Gaps = 20/441 (4%)
Query: 51 QSLQWISRTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEF 110
Q LQW +R CGEL + D G+ VRLCGW LHR+ G+ FL LRD++G +QV T L E+
Sbjct: 81 QPLQWPARDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRDRSGTVQVTT-LPEY 139
Query: 111 PVAHSANKNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIP 170
P ++ LR E V A++GVVRSR T++IN +MKTG IEVAA+ + LNS L P
Sbjct: 140 PEVYAVVNKLRVESVVAVEGVVRSRPTEAINTDMKTGAIEVAADNIYVLNSVTRSLPF-P 198
Query: 171 ELNSDDAEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVEP---- 226
+D + EEIRLR+R LDLR+ QM SN+ LRHNVVK IRRYLED H FVEP
Sbjct: 199 ITTADTVKEKFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYLEDRHDFVEPGMFY 258
Query: 227 -------CHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEFTQLDMEMAFTPLEDILS 279
K + +S + + +DLRA DRQPEFTQLDME+AFT +ED+L
Sbjct: 259 ALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRA--DRQPEFTQLDMEIAFTSMEDMLK 316
Query: 280 LNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRFDLELKDVSDIFSGTSFK 339
LNEEL+R +F E+ ++LPNPFPRLTY EAMNRYG+D PD RFD +LKDVSD F G+SFK
Sbjct: 317 LNEELMRHIFQEVGDIKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFK 376
Query: 340 IFSDSLECGGVIKVLCVPSGATK----DSYILDIYNEAEKYGAKGLTTLWITKNG-IGGF 394
IF+D+LE GGVIK LCVP GA + D +Y EA K GAKGL L + NG + G
Sbjct: 377 IFADTLENGGVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKGLPFLKVMDNGELEGI 436
Query: 395 SSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLRVYVAHKLGLIDHAKH 454
LV+S+ E+LL+ A DLILF G ++ N+ LG LR+++AHKL +ID + H
Sbjct: 437 GPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAH 496
Query: 455 SILWITDFPMFKWDDSKQRLE 475
SILW+TDFPMF+W+ +QR E
Sbjct: 497 SILWVTDFPMFEWNSDEQRYE 517
>dbj|BAC43347.1| putative aspartate--tRNA ligase [Arabidopsis thaliana]
Length = 528
Score = 389 bits (998), Expect = e-106
Identities = 212/396 (53%), Positives = 269/396 (67%), Gaps = 43/396 (10%)
Query: 120 LRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDAEG 179
+R EYV ++G VRSR +S+N +MKTGF+EV A V+ LN KL + +D+ +
Sbjct: 1 MRLEYVVLVEGTVRSRPNESVNKKMKTGFVEVVAEHVEILNPVRTKLPFLVT-TADENKD 59
Query: 180 SPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE-------------- 225
EEIRLR+RCLDLR+Q+M +NI+LRHNVVKLIRRYLED HGF+E
Sbjct: 60 LIKEEIRLRFRCLDLRRQRMKNNIVLRHNVVKLIRRYLEDRHGFIEIETPILSRSTPEGA 119
Query: 226 ---------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEFTQ 264
K + +S + + +DLRA DRQPEFTQ
Sbjct: 120 RDYLVPSRIQSGTFYALPQSPQLFKQMLMVSGFDKYYQIARCFRDEDLRA--DRQPEFTQ 177
Query: 265 LDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRFDL 324
LDMEMAF P+ED+L LNE+LIRKVF EIKG++LP+PFPRLTYA+AM+RYGSD PDTRFDL
Sbjct: 178 LDMEMAFMPMEDMLKLNEDLIRKVFSEIKGIQLPDPFPRLTYADAMDRYGSDRPDTRFDL 237
Query: 325 ELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL----DIYNEAEKYGAKG 380
ELKDVS++F+ +SF++F+++LE GG+IKVLCVP GA K S DIYNEA K GAKG
Sbjct: 238 ELKDVSNVFTESSFRVFTEALESGGIIKVLCVPLGAKKYSNSALKKGDIYNEAMKSGAKG 297
Query: 381 LTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLR 439
L L + NG I G ++LVSS+DSA +++C A P DLILF G SVNKTL LR
Sbjct: 298 LPFLKVLDNGEIEGIAALVSSLDSAGKINFVKQCGAAPGDLILFGVGPVTSVNKTLDRLR 357
Query: 440 VYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
++VAH + LIDH+KHSILW+TDFPMF+W++ +QRLE
Sbjct: 358 LFVAHDMDLIDHSKHSILWVTDFPMFEWNEPEQRLE 393
>ref|XP_550178.1| putative aspartyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)] gi|54290457|dbj|BAD61344.1| putative
aspartyl-tRNA synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 604
Score = 354 bits (909), Expect = 3e-96
Identities = 205/441 (46%), Positives = 259/441 (58%), Gaps = 67/441 (15%)
Query: 51 QSLQWISRTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEF 110
Q LQW +R CGEL + D G+ VRLCGW LHR+ G+ FL LRD
Sbjct: 81 QPLQWPARDALCGELGAGDAGRRVRLCGWVALHRAHAGLTFLTLRD-------------- 126
Query: 111 PVAHSANKNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIP 170
++G ++VAA+ + LNS L P
Sbjct: 127 ----------------------------------RSGTVQVAADNIYVLNSVTRSLPF-P 151
Query: 171 ELNSDDAEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVEP---- 226
+D + EEIRLR+R LDLR+ QM SN+ LRHNVVK IRRYLED H FVEP
Sbjct: 152 ITTADTVKEKFPEEIRLRFRVLDLRRPQMQSNLRLRHNVVKHIRRYLEDRHDFVEPGMFY 211
Query: 227 -------CHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEFTQLDMEMAFTPLEDILS 279
K + +S + + +DLRA DRQPEFTQLDME+AFT +ED+L
Sbjct: 212 ALPQSPQLFKQMLMVSGFEKYYQIARCFRDEDLRA--DRQPEFTQLDMEIAFTSMEDMLK 269
Query: 280 LNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRFDLELKDVSDIFSGTSFK 339
LNEEL+R +F E+ ++LPNPFPRLTY EAMNRYG+D PD RFD +LKDVSD F G+SFK
Sbjct: 270 LNEELMRHIFQEVGDIKLPNPFPRLTYTEAMNRYGTDRPDLRFDWQLKDVSDAFLGSSFK 329
Query: 340 IFSDSLECGGVIKVLCVPSGATK----DSYILDIYNEAEKYGAKGLTTLWITKNG-IGGF 394
IF+D+LE GGVIK LCVP GA + D +Y EA K GAKGL L + NG + G
Sbjct: 330 IFADTLENGGVIKALCVPGGAKEFSNTDLKKGTVYTEASKAGAKGLPFLKVMDNGELEGI 389
Query: 395 SSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLRVYVAHKLGLIDHAKH 454
LV+S+ E+LL+ A DLILF G ++ N+ LG LR+++AHKL +ID + H
Sbjct: 390 GPLVASLKPEKKEQLLKHLDAKSGDLILFALGEQSAANRILGRLRLFIAHKLEVIDTSAH 449
Query: 455 SILWITDFPMFKWDDSKQRLE 475
SILW+TDFPMF+W+ +QR E
Sbjct: 450 SILWVTDFPMFEWNSDEQRYE 470
>ref|ZP_00326022.1| COG0173: Aspartyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 595
Score = 341 bits (874), Expect = 3e-92
Identities = 190/459 (41%), Positives = 278/459 (60%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CG+++SN++ +TV LCGW + R GGV FL LRD++G+IQ+ + + P ++
Sbjct: 2 RTHYCGQVNSNNIEETVNLCGWVDRRRDHGGVIFLDLRDRSGLIQIVSDPERTPDSYQIA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
++R EYV I G V R +S+N ++ TG IE+ A+++Q LN +L ++++ +
Sbjct: 62 GDIRNEYVVQITGRVSRRPEESLNPKLPTGEIEIYADDIQLLNGLGKQLPF--QVSTAET 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + EE+RL+YR LDLR+++M N+LLRH V+K IRR+LED FVE
Sbjct: 120 E-AVREELRLKYRYLDLRRERMTRNLLLRHEVIKAIRRFLEDEQNFVEIETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K + +S + + +DLRA DRQPEF
Sbjct: 179 GARDYLVPSRVHPGEWFALPQSPQLFKQILMVSGFDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+IL LNE+L+ +F ++KG++LP PFPRLTY EAM RYGSD PD RF
Sbjct: 237 TQLDMEMSFMSQEEILQLNEKLVAYIFQKVKGIDLPLPFPRLTYTEAMERYGSDKPDVRF 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
LEL DVSD+ + FK+FS ++ GG++KVL +P G S + D++ EA + G
Sbjct: 297 GLELVDVSDLMKDSGFKVFSGAIAKGGIVKVLPIPGGNDAISNVRIKPGGDLFKEASEVG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKGL + + + G I ++ ++ +ELL+R +A P L+LF A +VNKTL
Sbjct: 357 AKGLAYVRVKEGGKIDTIGAIKDNLTDEQKQELLKRTNAQPGHLLLFAADDANTVNKTLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR+ + +LGLID K S+LW+TDFPMF+W++ +QRLE
Sbjct: 417 RLRLVIGEQLGLIDQDKISLLWVTDFPMFEWNEDEQRLE 455
>ref|ZP_00159611.2| COG0173: Aspartyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 595
Score = 337 bits (865), Expect = 4e-91
Identities = 189/459 (41%), Positives = 275/459 (59%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CGEL D+G+TV L GW + R GGV FL LRD++GI+QV + P ++
Sbjct: 2 RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+LR EYV I G V R +S+N + TG +E+ A++++ LN +L ++++ D
Sbjct: 62 NSLRNEYVVEITGRVTQRPEESLNSRIPTGEVEIYADKIELLNGVRKQLPF--QVSTADT 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + E++RL+YR LDLR+ +M NI LRH VVK +RRYLED+ GF+E
Sbjct: 120 E-TVREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K + +S + + +DLRA DRQPEF
Sbjct: 179 GARDYVLPSRVNPGEWFALPQSPQLFKQILMVSGMDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+I+ LNE+L+ +F +KGVELP PFPRLTYAEAM RYG D PDTR+
Sbjct: 237 TQLDMEMSFMSEEEIIQLNEKLVSYIFKTVKGVELPLPFPRLTYAEAMERYGCDKPDTRY 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
DL+L +VSD+ + FK+F D++ GG++K+L +P+G + S + D++ EA + G
Sbjct: 297 DLQLVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGGDLFREASEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKGL + + ++G I ++ ++ +E+L+R A P L+LF AG A+VNKTL
Sbjct: 357 AKGLAYIRVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAATVNKTLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR +A + GLID K ++LW+ DFPMF+W+ ++RLE
Sbjct: 417 RLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLE 455
>sp|Q8YUB6|SYD_ANASP Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS)
gi|17131528|dbj|BAB74135.1| aspartate--tRNA ligase
[Nostoc sp. PCC 7120] gi|17229928|ref|NP_486476.1|
aspartate--tRNA ligase [Nostoc sp. PCC 7120]
Length = 595
Score = 336 bits (861), Expect = 1e-90
Identities = 188/459 (40%), Positives = 274/459 (58%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CGEL D+G+TV L GW + R GGV FL LRD++GI+QV + P ++
Sbjct: 2 RTHYCGELRQKDIGETVTLYGWVDRRRDHGGVIFLDLRDRSGIVQVVSDPQRTPDSYELA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+LR EYV I G V R +S+N + TG +E+ A++++ LN +L ++++ D
Sbjct: 62 NSLRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIELLNGVRKQLPF--QVSTADT 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + E++RL+YR LDLR+ +M NI LRH VVK +RRYLED+ GF+E
Sbjct: 120 E-TVREDLRLKYRYLDLRRDRMARNIQLRHQVVKAMRRYLEDVEGFIEVETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K + +S + + +DLRA DRQPEF
Sbjct: 179 GARDYVLPSRVNPGEWFALPQSPQLFKQILMVSGLDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+I+ LNE+L+ +F +KGVELP PFPRLTYAEAM RYG D PDTR+
Sbjct: 237 TQLDMEMSFMSEEEIIELNEKLVSYIFKTVKGVELPLPFPRLTYAEAMERYGCDKPDTRY 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
DL+L +VSD+ + FK+F D++ GG++K+L +P+G + S + D++ EA + G
Sbjct: 297 DLQLVNVSDVMKDSGFKVFRDAVANGGIVKILPIPNGNEQISNVRIKPGGDLFREASEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKGL + + ++G I ++ ++ +E+L+R A P L+LF AG +VNKTL
Sbjct: 357 AKGLAYIRVREDGEIDTIGAIKDNLSEEQKQEILQRTGAKPGHLLLFGAGDAVTVNKTLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR +A + GLID K ++LW+ DFPMF+W+ ++RLE
Sbjct: 417 RLRQAIAKEFGLIDPDKINLLWVVDFPMFEWNADEKRLE 455
>ref|NP_681934.1| aspartyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|46577258|sp|Q8DJS8|SYD_SYNEL Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
gi|22294867|dbj|BAC08696.1| aspartyl-tRNA synthetase
[Thermosynechococcus elongatus BP-1]
Length = 605
Score = 326 bits (835), Expect = 1e-87
Identities = 188/459 (40%), Positives = 263/459 (56%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CG++ DVG TV L GW + R GGV F+ LRD++GI+Q+ + P A+
Sbjct: 2 RTHYCGDVRLRDVGTTVTLYGWVDRRRDHGGVIFIDLRDRSGIVQIVSDPQRTPDAYPQA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ LR EYV + G V R S+N ++ TG IE+ A+ ++ LN+ +L P S
Sbjct: 62 ERLRSEYVVKVVGRVSKRPADSVNPKLATGDIEIYADGIEVLNTVRQQL---PFAISSTE 118
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
EE+RLRYR LDLR+++M N+ LRH VV+ +RR+LED GF+E
Sbjct: 119 NEEVREEVRLRYRYLDLRRERMARNLRLRHRVVQAMRRFLEDEAGFIEVETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L ++ C + + + +DLRA DRQPEF
Sbjct: 179 GARDYLVPSRVNPGEWFALPQSPQLFKQLLMVAGCDRYYQIAHCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+IL LNE LI +F +KG+ELP PFPRL+Y EAM+RYG+D PDTR+
Sbjct: 237 TQLDMEMSFMDQEEILDLNEALICHIFKTVKGIELPRPFPRLSYQEAMDRYGTDKPDTRY 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
LEL DVSDI + FK+FS ++ GGV+K+L +P+G+ + S + D++ EA G
Sbjct: 297 GLELVDVSDILKDSGFKVFSGAIAQGGVVKILPIPNGSDRISNVRIKPGGDLFQEATTAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKGL + + NG I ++ ++ LL R A P L+LF AG A+VNKTL
Sbjct: 357 AKGLAYIRVRNNGEIDTIGAIKDNLSPEQKALLLERTGAQPGHLLLFGAGETATVNKTLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR +A + LID +LW+ DFPMF+W+ ++RLE
Sbjct: 417 RLRQTIAREFNLIDPTATHLLWVVDFPMFEWNAEEKRLE 455
>ref|NP_441230.1| aspartyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|1652993|dbj|BAA17910.1| aspartyl-tRNA synthetase
[Synechocystis sp. PCC 6803]
gi|2500971|sp|P73851|SYD_SYNY3 Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 599
Score = 325 bits (832), Expect = 3e-87
Identities = 185/459 (40%), Positives = 269/459 (58%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CG+L + +G+TV L GW + R GGV FL LRD+ GI+Q+ + D+ P ++
Sbjct: 2 RTHYCGDLRTTHLGETVTLYGWVDRRRDHGGVIFLDLRDRQGIVQIASSPDQTPASYPVA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ LR EYV + GVV R +S+N ++ TG IE+ A+ + LN N +L + ++S +A
Sbjct: 62 EGLRNEYVVQVTGVVSKRPPESLNEKIPTGEIEIYADSIILLNGVNQQLPFV--VSSHEA 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E E++RL+YR LDLR+ +++ N+ LRH VVK +RR+LED F+E
Sbjct: 120 E-QVREDVRLKYRYLDLRRARLSQNLQLRHQVVKAMRRFLEDQENFLEIETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L ++ + + +DLRA DRQPEF
Sbjct: 179 GARDYLVPSRVNPGEWYALPQSPQLFKQLLMVAGMDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+IL LNE LI +F +K ++LP PFPRLTY E+M +YG+D PDTRF
Sbjct: 237 TQLDMEMSFMGQEEILDLNEALICHIFKVVKNIDLPRPFPRLTYQESMAKYGNDRPDTRF 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
LEL DVSD+ T FK+FS ++ GG IK + VP G S + D++ EA + G
Sbjct: 297 GLELVDVSDLLGNTGFKVFSAAVSSGGSIKAIRVPGGNETISNVRIKPGGDLFKEATEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKG+ + + NG I ++ ++D A ++ LL+ A DL+LF AG A+V+K+L
Sbjct: 357 AKGIAYIRVRDNGEIDTIGAIKENLDEAQVKTLLQLTQAEAGDLLLFGAGDTATVDKSLS 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR+ + +LGLID ++LWITDFPMF+W+ ++R E
Sbjct: 417 RLRLVLGEQLGLIDPDAINLLWITDFPMFEWNSDEKRFE 455
>ref|ZP_00164407.1| COG0173: Aspartyl-tRNA synthetase [Synechococcus elongatus PCC
7942]
Length = 599
Score = 325 bits (832), Expect = 3e-87
Identities = 187/459 (40%), Positives = 267/459 (57%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CGEL + VG +V L GW + R GGV F+ LRD+TG +Q+ + + P ++
Sbjct: 2 RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ LR EYV I G V R +S+N ++ TG +E+ A+ ++ LN+ +L +++S D
Sbjct: 62 EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPF--QVSSADE 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + E++RLRYR LDLR+ +MN N+ LRH VVK IRR+LED F+E
Sbjct: 120 E-TVREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S + + +DLRA DRQPEF
Sbjct: 179 GARDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+I+ LNE LI +F +KG+ELP PFPRLTYAEAM+RYGSD PDTRF
Sbjct: 237 TQLDMEMSFLSQEEIIDLNERLIAHIFKTVKGIELPRPFPRLTYAEAMDRYGSDRPDTRF 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
LEL DVSD+ + FK+FS +++ GG +K+L +P G + S + DI+ EA + G
Sbjct: 297 GLELVDVSDVVADMGFKVFSGAVKSGGKVKILPIPDGNDRISNVRIKPGGDIFKEATEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
A GL + + +NG I ++ ++ E+LRR A P L+LF AG VNK+L
Sbjct: 357 AAGLAYIRVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNKSLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
+R ++ +LGLID ++LW+ DFPM +W+ ++R E
Sbjct: 417 RVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYE 455
>ref|YP_170950.1| aspartyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|56685208|dbj|BAD78430.1| aspartyl-tRNA synthetase
[Synechococcus elongatus PCC 6301]
gi|62287522|sp|Q5N5I8|SYD_SYNP6 Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 599
Score = 323 bits (828), Expect = 7e-87
Identities = 186/459 (40%), Positives = 267/459 (57%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CGEL + VG +V L GW + R GGV F+ LRD+TG +Q+ + + P ++
Sbjct: 2 RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERTPESYHQA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ LR EYV I G V R +S+N ++ TG +E+ A+ ++ LN+ +L +++S D
Sbjct: 62 EGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPF--QVSSADE 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + E++RLRYR LDLR+ +MN N+ LRH VVK IRR+LED F+E
Sbjct: 120 E-TVREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S + + +DLRA DRQPEF
Sbjct: 179 GARDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+I+ LNE LI +F +KG+ELP PFPRLTYAEAM+RYGSD PDTRF
Sbjct: 237 TQLDMEMSFLSQEEIIDLNERLIAHIFKTVKGIELPRPFPRLTYAEAMDRYGSDRPDTRF 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
L+L DVSD+ + FK+FS +++ GG +K+L +P G + S + DI+ EA + G
Sbjct: 297 GLKLVDVSDVVADMGFKVFSGAVKSGGKVKILPIPDGNDRISNVRIKPGGDIFKEATEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
A GL + + +NG I ++ ++ E+LRR A P L+LF AG VNK+L
Sbjct: 357 AAGLAYIRVRENGEIDTIGAIKDNLSDEQKAEILRRTQAQPGTLLLFGAGSTDIVNKSLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
+R ++ +LGLID ++LW+ DFPM +W+ ++R E
Sbjct: 417 RVRQFLGKELGLIDPEALNLLWVVDFPMVEWNADEKRYE 455
>ref|ZP_00110043.1| COG0173: Aspartyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 595
Score = 323 bits (827), Expect = 1e-86
Identities = 185/459 (40%), Positives = 266/459 (57%), Gaps = 46/459 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CGEL +G+TV GW + R GGV FL LRD++GI+Q+ + P ++
Sbjct: 2 RTHYCGELRKEHIGETVTFYGWVDRRRDHGGVVFLDLRDRSGIVQIVSDPQRTPDSYEQA 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
LR EYV I G V R +S+N + TG +E+ A++++ LN+ +L +++ D
Sbjct: 62 NALRNEYVVEITGRVTQRPEESLNTRIPTGEVEIYADKIKLLNAVGKQLPF--QVSVADT 119
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
E + E++RL+YR LDLR+++M N+ LRH +VK +RRYLED+ GF+E
Sbjct: 120 E-TVREDLRLKYRYLDLRRERMAQNLQLRHQIVKAMRRYLEDLEGFIEVETPILTRSTPE 178
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S + + +DLRA DRQPEF
Sbjct: 179 GARDYVLPSRVNPGEWYALPQSPQLFKQLLMVSGLDRYYQIARCFRDEDLRA--DRQPEF 236
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQLDMEM+F E+I+ LNE L+ +F +KG+EL PF RLTYAE M RYGSD PDTR+
Sbjct: 237 TQLDMEMSFMSQEEIIELNESLVCHIFKTVKGIELQRPFLRLTYAEGMERYGSDKPDTRY 296
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYIL-----DIYNEAEKYG 377
LEL DVSDI + FK+F D++ GG++K+L +P+G S + D++ EA + G
Sbjct: 297 GLELVDVSDIVKDSGFKVFRDTVTNGGIVKILPIPNGNDVISNVRIKPGGDLFKEASEAG 356
Query: 378 AKGLTTLWITKNG-IGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
AKGL + + +G I ++ ++ +E+LRR A L+LF AG A+VNKTL
Sbjct: 357 AKGLAYIRVRDDGEIDTIGAIKDNLSEEQKQEILRRTGAKAGHLLLFGAGEAATVNKTLD 416
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
LR +A + LID K ++LWITDFPMF+W+ ++RLE
Sbjct: 417 RLRQAIAREFNLIDPDKINLLWITDFPMFEWNADEKRLE 455
>ref|ZP_00333349.1| COG0173: Aspartyl-tRNA synthetase [Thiobacillus denitrificans ATCC
25259]
Length = 597
Score = 267 bits (683), Expect = 5e-70
Identities = 171/457 (37%), Positives = 243/457 (52%), Gaps = 52/457 (11%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CG +++ DVG TV LCGWA R GGV F+ LRD+ G++QV D P A
Sbjct: 2 RTHYCGAVTAADVGNTVTLCGWAHRRRDHGGVIFIDLRDREGMVQVVVDPDT-PAAFKLA 60
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+++R E+V I+G VR R + N + TG +EV ++ LN +L P DD
Sbjct: 61 EDVRAEFVLKIEGKVRPRPAGTENPHLPTGMVEVLTLDLDVLNP-----SLTPPFQIDDE 115
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
+ NE IRL+YR LDLR++ M N+ LR+ V K++R YL D HGF+E
Sbjct: 116 --TINENIRLQYRYLDLRREPMQKNLKLRYRVSKIMRDYL-DTHGFMEVETPMLTRSTPE 172
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S + + +DLRA DRQPEF
Sbjct: 173 GARDYLVPSRVHDGMFYALPQSPQLFKQLLMVSGVDRYFQITKCFRDEDLRA--DRQPEF 230
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D+E +F E I+ L E +IR + + +G+ELP FPR++YAEAMNRYGSD PD R
Sbjct: 231 TQVDLETSFMGEEAIMGLVEGMIRDMMQKAQGIELPAAFPRMSYAEAMNRYGSDKPDLRV 290
Query: 323 DLELKDVSDIFSGTSFKIF-SDSLECGGVIKVLCVPSGATKDSYILDIYNEAEK-YGAKG 380
LE+ DV D+ +FK+F + + + G + L +P GAT +D Y E K YGAKG
Sbjct: 291 TLEIVDVGDVMRDVAFKVFATPANDPKGRVAALRIPGGATLSRSEIDGYTEFVKIYGAKG 350
Query: 381 LTTLWITK----NGIGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLG 436
L + + N G S +V ++ A + ++ R A DLI F A VN LG
Sbjct: 351 LAYIKVNDVGQLNEAGLQSPIVKNLSEAALHAVMERTGAQNGDLIFFGADRAKVVNDALG 410
Query: 437 HLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQR 473
LR+ + H+ G +D + LW+ DFPMF++++ + R
Sbjct: 411 ALRLKIGHEKGHVDGRAWAPLWVVDFPMFEYNEDENR 447
>ref|NP_952514.1| aspartyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|39983444|gb|AAR34837.1| aspartyl-tRNA synthetase
[Geobacter sulfurreducens PCA]
gi|62287579|sp|Q74D56|SYD_GEOSL Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 594
Score = 248 bits (632), Expect = 4e-64
Identities = 159/452 (35%), Positives = 237/452 (52%), Gaps = 47/452 (10%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
R+H CG L+ DVGK V L GW R GG+ F+ LRD+ G+ Q+ + P AH
Sbjct: 10 RSHLCGTLTKADVGKQVTLMGWVMRRRDHGGLIFIDLRDREGLAQIVFDPAKAPEAHREA 69
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ +R EYV AI+G V R ++N MKTG +E+ + + LN A +P D
Sbjct: 70 EAVRNEYVVAIKGEVVPRPEGTVNPNMKTGEVEILVTQCKLLNRSKA----LPFTLDDYV 125
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
+ + N +RL++R LDLR+ + N++LR V ++ R+YL + +GF+E
Sbjct: 126 DVAEN--LRLKHRYLDLRRTPLQQNLILRSRVSQVTRQYLTE-NGFLEIETPFLTKSTPE 182
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K + IS ++ + +DLRA DRQPEF
Sbjct: 183 GARDFLVPSRINQGNFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRA--DRQPEF 240
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D E++F +D++++ E LI ++F E K +++ P PR+TYAEA+ RYG D+PD RF
Sbjct: 241 TQIDCELSFVDRDDVIAVMEGLIARIFKEAKEIDVQLPIPRMTYAEAIRRYGVDNPDVRF 300
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYILDIYNEAEK-YGAKGL 381
LEL +++DI G+ FK+F+D GG+IK L A +D E K YGAKGL
Sbjct: 301 GLELVELTDIVKGSGFKVFADVAAGGGIIKGLNAKGCARFSRKEIDDLTEFVKIYGAKGL 360
Query: 382 TTLWITKNGIGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLRVY 441
++ G S + + I ++ R A DL+LF A VN +LG LR
Sbjct: 361 A--YVKIEGGEWHSPIAKFFTAQEIADMNRAFGAEEGDLLLFVADKPKVVNDSLGKLRNQ 418
Query: 442 VAHKLGLIDHAKHSILWITDFPMFKWDDSKQR 473
+A LGL+D +WITDFP+ +WD+ ++R
Sbjct: 419 LAQILGLVDKGTFKFVWITDFPLLEWDEEEKR 450
>gb|AAF94325.1| aspartyl-tRNA synthetase [Vibrio cholerae O1 biovar eltor str.
N16961] gi|15641179|ref|NP_230811.1| aspartyl-tRNA
synthetase [Vibrio cholerae O1 biovar eltor str. N16961]
gi|11271285|pir||F82234 aspartyl-tRNA synthetase VC1166
[imported] - Vibrio cholerae (strain N16961 serogroup
O1) gi|24212424|sp|Q9KSU0|SYD_VIBCH Aspartyl-tRNA
synthetase (Aspartate--tRNA ligase) (AspRS)
Length = 591
Score = 236 bits (601), Expect = 2e-60
Identities = 160/454 (35%), Positives = 238/454 (52%), Gaps = 57/454 (12%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
R+H+CG L+ + VG+TV LCGW R LGG+ F+ +RD+ GI+QV D V AN
Sbjct: 2 RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVAN 61
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+ LR E+ + G VR+R +N EM TG +E+ A ++ +N R+ L L D
Sbjct: 62 Q-LRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIIN-RSDVLPL-------DF 112
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
+EE RL+YR LDLR+ +M+ I LR +RR+L D HGF++
Sbjct: 113 NQKNSEEQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFL-DTHGFLDIETPVLTKATPE 171
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S ++ + +DLRA DRQPEF
Sbjct: 172 GARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRA--DRQPEF 229
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D+E +F E + ++ E++IR+++LE+ V+L + FP + Y+EAM R+GSD PD R
Sbjct: 230 TQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDLGD-FPIMPYSEAMRRFGSDKPDLRN 288
Query: 323 DLELKDVSDIFSGTSFKIFS-DSLECGGVIKVLCVPSGATKDSYILDIYNE-AEKYGAKG 380
+EL DV+D+ FK+FS + + G + LC+P GA +D Y YGAKG
Sbjct: 289 PMELVDVADLLKDVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKG 348
Query: 381 LTTLWITKN----GIGGFSSLVSS-MDSATIEELLRRCSAGPSDLILFHAGHHASVNKTL 435
L W+ N G+ G S V+ + I+ ++ R A D+ILF A V + L
Sbjct: 349 LA--WLKVNDLAAGMEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEAL 406
Query: 436 GHLRVYVAHKLGLIDHAKHSILWITDFPMFKWDD 469
G LR+ +LG+ + + + LW+ DFPMF+ DD
Sbjct: 407 GALRLKAGKELGITNESAWAPLWVVDFPMFESDD 440
>emb|CAG35299.1| probable aspartyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|51244422|ref|YP_064306.1| aspartyl-tRNA synthetase
[Desulfotalea psychrophila LSv54]
gi|62287551|sp|Q6AQS4|SYD_DESPS Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 607
Score = 234 bits (598), Expect = 3e-60
Identities = 158/468 (33%), Positives = 237/468 (49%), Gaps = 52/468 (11%)
Query: 47 KPLNQSLQWISRTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTR 106
K + +S+ + RTH C L D+GK V L GW R GGV F+ LRD+ GI QV
Sbjct: 11 KTIMESMGSLKRTHFCDALRKEDIGKQVILMGWVLRRRDHGGVIFIDLRDRRGITQVVFN 70
Query: 107 LDEFPVAHSANKNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKL 166
+ P H+ +LR E+V AI+G V +R N ++ TG IE+ +E+ LN+
Sbjct: 71 PEINPEVHAKAHSLRSEWVLAIKGTVSARPGDMANTKLGTGDIEILVDELVILNTSET-- 128
Query: 167 TLIPELNSDDAEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLED------- 219
P D+ E +E +RL+YR LDLR+ M N+LLRH V+ IR YL D
Sbjct: 129 ---PPFPLDE-ETEVSENLRLQYRYLDLRRPAMARNLLLRHKAVQAIRNYLNDNEFLDIE 184
Query: 220 -----------IHGFVEPCH----------------KALRYISKC*W*LVLINIIK*QDL 252
++ P K L I+ ++ + +DL
Sbjct: 185 TPMLTRSTPEGARDYLVPSRVSAGKFYALPQSPQLFKQLLMIAGMDRYYQIVKCFRDEDL 244
Query: 253 RAVHDRQPEFTQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNR 312
RA DRQPEFTQ+DME++F E I+ + E +I+ +F E ++L PF +TYA++M R
Sbjct: 245 RA--DRQPEFTQIDMELSFVDEEQIIEVTEGMIQTLFKETLDLDLTPPFAHITYADSMER 302
Query: 313 YGSDHPDTRFDLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYILDIYNE 372
+G D PD RF +EL ++++I SFK+F E GG ++ + + A LD E
Sbjct: 303 FGCDRPDMRFGMELVNLTEIAKSCSFKVFRAIAEEGGTVRAINAKACAHFSRKDLDGLTE 362
Query: 373 -AEKYGAKGLTTLWITKNGIGGFSSLV----SSMDSATIEELLRRCSAGPSDLILFHAGH 427
A +GAKGL W+ G + S + S + A+I E L A DL+ F A
Sbjct: 363 YAALFGAKGLA--WVKMKADGEWQSPIAKFFSEEERASIAEAL---DAQEGDLLFFGADS 417
Query: 428 HASVNKTLGHLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQRLE 475
V + LG LR+ +A +L L+D + + +W+TDFP+ ++D+ + R +
Sbjct: 418 EKVVFQVLGELRLEMARRLDLLDKKEFNFVWVTDFPLMEYDEKEDRYQ 465
>gb|AAQ65394.1| aspartyl-tRNA synthetase [Porphyromonas gingivalis W83]
gi|34540016|ref|NP_904495.1| aspartyl-tRNA synthetase
[Porphyromonas gingivalis W83]
gi|46577172|sp|Q7MXM0|SYD_PORGI Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 587
Score = 225 bits (574), Expect = 2e-57
Identities = 156/459 (33%), Positives = 228/459 (48%), Gaps = 62/459 (13%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RT+ CGEL + + +TV LCGW + R +GG+ F+ LRD+ G Q+ D P
Sbjct: 3 RTNTCGELRLSHLQQTVTLCGWVQRVRRMGGMTFVDLRDRYGTTQLVFNRDSAPAELCDR 62
Query: 118 -KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDD 176
++L RE+V G V RS+++ N + TG IE+A E+ LN +P +D
Sbjct: 63 AEDLGREWVIRATGTVMERSSKNPN--IPTGDIEIAVGEMDVLNRSE-----VPPFTIED 115
Query: 177 AEGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYL------------------E 218
E +++R++YR LDLR+ + SN+ LRH + +R+YL E
Sbjct: 116 -ETDGGDDLRMKYRYLDLRRHCVRSNMELRHRMALEVRKYLDGEGFLEVETPMLIKSTPE 174
Query: 219 DIHGFVEPCH----------------KALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
FV P K L +S ++ + +DLRA DRQPEF
Sbjct: 175 GARDFVVPSRMNPGQFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRA--DRQPEF 232
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D EM+F ED+LS E + + +F I+ VE+ FPR+T+ +AM YGSD PDTRF
Sbjct: 233 TQIDCEMSFVEQEDVLSTFEGMAKHLFRTIRHVEISEAFPRMTWHDAMKYYGSDKPDTRF 292
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYILDIYNEAEK---YGAK 379
D+ ++ D+ G F +F + GG+ C + LD + K GAK
Sbjct: 293 DMRFVELMDVLKGHGFSVFDSAAYIGGI----CAKGAGSYTRKQLDALTDFVKRPQVGAK 348
Query: 380 GLTTLWITKNGIGGFSSLVSSMD----SATIEELLRRCSAGPSDLILFHAGHH-ASVNKT 434
G+ + +G S+ SS+D T++EL R A P DLIL +G K
Sbjct: 349 GMVYARVESDG-----SVKSSVDKFYTQETLQELRRTMEAEPGDLILILSGDDLMKTRKQ 403
Query: 435 LGHLRVYVAHKLGLIDHAKHSILWITDFPMFKWDDSKQR 473
L LR+ V +LGL D K S LW+ DFP+F+WD+ +R
Sbjct: 404 LCELRLEVGSQLGLRDKNKFSCLWVVDFPLFEWDEETKR 442
>ref|ZP_00291933.1| COG0173: Aspartyl-tRNA synthetase [Thermobifida fusca]
Length = 579
Score = 223 bits (569), Expect = 8e-57
Identities = 153/448 (34%), Positives = 225/448 (50%), Gaps = 57/448 (12%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH G L ++ + V L GW R GGV FL LRD +GI+QV R DE +AH
Sbjct: 3 RTHEAGTLRADHAEQNVVLAGWVARRRDHGGVVFLDLRDASGIVQVVVREDE--LAH--- 57
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
+LR EY + G VR R + N ++ TG IEV A+ ++ L S +A L + N + +
Sbjct: 58 -DLRSEYCIKVTGTVRIRPEGNENPDIATGEIEVVASHIEVL-SESAPLPFPLDGNQEIS 115
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFV------------- 224
E E RLRYR LD+R+ + + +R + + D +GFV
Sbjct: 116 E-----EARLRYRYLDMRRPETAEALRVRSRATYIAHEVMND-NGFVYVETPYLTRSTPE 169
Query: 225 -----------EPCH-----------KALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
+P H K L + L + +D RA DRQPEF
Sbjct: 170 GARDFLVPVRLQPGHWYALPQSPQLFKQLLMVGGMERYYQLTRCFRDEDFRA--DRQPEF 227
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D+EM+F ED+ + E+L ++ E++GVELP PF R+ +AEAM+R+G+D PD RF
Sbjct: 228 TQIDIEMSFVDEEDLFDIGEKLFTRLLREVRGVELPRPFRRMKFAEAMDRFGTDKPDLRF 287
Query: 323 DLELKDVSDIFSGTSFKIFSDSLECGGVIKVLCVPSGATKDSYILDIYNE-AEKYGAKGL 381
EL +++D F+ T F++F + + +P GA++ LD + E A GAKGL
Sbjct: 288 GQELVELTDFFANTPFRVFQ-----APYVGAVVMPGGASQTRRELDAWQEWARSRGAKGL 342
Query: 382 TTLWITKNGIGGFSSLVSSMDSATIEELLRRCSAGPSDLILFHAGHHASVNKTLGHLRVY 441
+ + ++G G + ++ L R A P D I F AG + + LG R+
Sbjct: 343 AYVLVHEDGTLG-GPVAKNLSEEERAGLAERVGAKPGDAIFFSAGERTASQELLGAARLE 401
Query: 442 VAHKLGLIDHAKHSILWITDFPMFKWDD 469
+ + GLID + +LWITD PMF+ DD
Sbjct: 402 IGKRCGLIDESAWEVLWITDMPMFEKDD 429
>gb|AAO10541.1| Aspartyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|27365486|ref|NP_761014.1| Aspartyl-tRNA synthetase
[Vibrio vulnificus CMCP6]
gi|29611878|sp|Q8DAN7|SYD_VIBVU Aspartyl-tRNA synthetase
(Aspartate--tRNA ligase) (AspRS)
Length = 592
Score = 223 bits (568), Expect = 1e-56
Identities = 156/454 (34%), Positives = 232/454 (50%), Gaps = 57/454 (12%)
Query: 58 RTHHCGELSSNDVGKTVRLCGWAELHRSLGGVAFLILRDQTGIIQVKTRLDEFPVAHSAN 117
RTH+CG L+ + G+TV LCGW R LGG+ F+ +RD+ GI+QV D A++
Sbjct: 2 RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPD-MADAYAVA 60
Query: 118 KNLRREYVAAIQGVVRSRSTQSINYEMKTGFIEVAANEVQELNSRNAKLTLIPELNSDDA 177
LR E+ + G VR+R +N EM TG +E+ A ++ +N R+ L L D
Sbjct: 61 SQLRNEFCIKLTGEVRTRPESQVNKEMATGEVEILAKGLEIIN-RSDVLPL-------DF 112
Query: 178 EGSPNEEIRLRYRCLDLRKQQMNSNILLRHNVVKLIRRYLEDIHGFVE------------ 225
+EE RL+YR LDLR+ +M+ I LR +RR+L+D +GF++
Sbjct: 113 NQKNSEEQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDD-NGFLDIETPVLTKATPE 171
Query: 226 -----------------------PCHKALRYISKC*W*LVLINIIK*QDLRAVHDRQPEF 262
K L +S ++ + +DLRA DRQPEF
Sbjct: 172 GARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRA--DRQPEF 229
Query: 263 TQLDMEMAFTPLEDILSLNEELIRKVFLEIKGVELPNPFPRLTYAEAMNRYGSDHPDTRF 322
TQ+D+E +F + + ++ E+++R+++LE+ V+L FP + ++EA+ R+GSD PD R
Sbjct: 230 TQIDIETSFMTSDQVRAVTEKMVREMWLELLNVDL-GEFPVMPFSEAIRRFGSDKPDLRN 288
Query: 323 DLELKDVSDIFSGTSFKIFSDSL-ECGGVIKVLCVPSGATKDSYILDIYNE-AEKYGAKG 380
LEL DV+D+ FK+FS + G + V+ VP GA +D Y YGAKG
Sbjct: 289 PLELVDVADLVKDVDFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDEYTGFVNIYGAKG 348
Query: 381 LTTLWITKN----GIGGFSSLVSS-MDSATIEELLRRCSAGPSDLILFHAGHHASVNKTL 435
L W+ N G+ G S V+ + I +L R A D+ILF A V + L
Sbjct: 349 LA--WMKVNDRAAGMEGIQSPVAKFLSEDVINGILERTQAESGDIILFGADKANIVAEAL 406
Query: 436 GHLRVYVAHKLGLIDHAKHSILWITDFPMFKWDD 469
G LR+ + LGL + LW+ DFPMF+ DD
Sbjct: 407 GALRLKLGKDLGLTKEGTWAPLWVVDFPMFEEDD 440
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 797,578,938
Number of Sequences: 2540612
Number of extensions: 32867197
Number of successful extensions: 99034
Number of sequences better than 10.0: 615
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 96834
Number of HSP's gapped (non-prelim): 1112
length of query: 487
length of database: 863,360,394
effective HSP length: 132
effective length of query: 355
effective length of database: 527,999,610
effective search space: 187439861550
effective search space used: 187439861550
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)
Medicago: description of AC146557.6