BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146557.5 - phase: 0
(146 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum] 150 5e-36
dbj|BAA86386.1| transcription factor [Nicotiana tabacum] 123 1e-27
emb|CAC34515.1| E2F transcription factor-1 E2F1 [Arabidopsis tha... 94 5e-19
emb|CAC15485.1| E2F-related protein [Arabidopsis thaliana] 94 5e-19
emb|CAB95727.1| transcription factor E2F [Daucus carota] 91 6e-18
dbj|BAD73815.1| putative E2F homolog [Oryza sativa (japonica cul... 91 8e-18
ref|XP_472427.1| OJ991214_12.14 [Oryza sativa (japonica cultivar... 89 2e-17
emb|CAB53258.1| E2F protein [Triticum sp.] 86 2e-16
gb|AAM90620.1| E2F-related transcription factor 1 [Thlaspi caeru... 85 4e-16
emb|CAC15486.1| E2F-related protein [Arabidopsis thaliana] gi|42... 83 2e-15
emb|CAC34724.1| E2F-4 protein [Arabidopsis thaliana] 83 2e-15
gb|AAD21456.2| putative E2F5 family transcription factor [Arabid... 83 2e-15
dbj|BAB17029.1| transcription factor-like protein [Arabidopsis t... 74 1e-12
dbj|BAD27913.1| E2F homolog [Oryza sativa (japonica cultivar-gro... 70 1e-11
dbj|BAB20933.1| E2F homolog [Oryza sativa] 65 4e-10
emb|CAD21953.1| putative E2F transcription factor [Physcomitrell... 51 7e-06
pir||G84775 probable E2F5 family transcription factor [imported]... 50 1e-05
emb|CAB70599.1| E2F-like protein [Arabidopsis thaliana] gi|42571... 42 0.004
gb|AAG31445.1| defective in exine formation [Arabidopsis thaliana] 40 0.012
gb|AAD56325.1| unknown protein [Arabidopsis thaliana] 39 0.020
>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
Length = 454
Score = 150 bits (380), Expect = 5e-36
Identities = 84/143 (58%), Positives = 104/143 (71%), Gaps = 6/143 (4%)
Query: 6 TPPATAAPDQIMQ-QRQLPFSSMKPPFL-AAADYHRFAPDHRRNQDLETEAIVVKTPQLK 63
TP AT Q +RQLPF+SMKPPF+ + DYHRF+ D+R + E IVVKTP +K
Sbjct: 3 TPKATNHQSQPQPLKRQLPFTSMKPPFVPSPGDYHRFS-DNRAPPAPDPETIVVKTPPMK 61
Query: 64 RKSEAADFEADSGD-RMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSN 122
RKS+ A+++A+S D +PG T +S QTPVSGKAGK G+ SR++KCNR G QTP SN
Sbjct: 62 RKSDTAEYDAESSDWTASPGYTEVVSSPHQTPVSGKAGK-GRGSRISKCNRPGPQTPMSN 120
Query: 123 IGSPSGNNLTPAGPCRYDSSLGI 145
+GSP GNNLTP GPCRYDSSLG+
Sbjct: 121 VGSP-GNNLTPVGPCRYDSSLGL 142
>dbj|BAA86386.1| transcription factor [Nicotiana tabacum]
Length = 439
Score = 123 bits (308), Expect = 1e-27
Identities = 66/128 (51%), Positives = 85/128 (65%), Gaps = 8/128 (6%)
Query: 18 QQRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGD 77
QQR+LPF+S KPP DYHRF+ D + + EAI+VK+ LKRKSE +++ G
Sbjct: 7 QQRELPFTSSKPPL---GDYHRFSTDPLQ----QPEAILVKSTPLKRKSETTNYKQGVGA 59
Query: 78 RMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPC 137
++T A +S +QTP+SGK GK K R +K RS +Q SN+GSPSGNN TP GPC
Sbjct: 60 QITDSGYADVSSPMQTPISGKVGKAQKVPRTSKA-RSASQAATSNLGSPSGNNATPVGPC 118
Query: 138 RYDSSLGI 145
RYDSSLG+
Sbjct: 119 RYDSSLGL 126
>emb|CAC34515.1| E2F transcription factor-1 E2F1 [Arabidopsis thaliana]
gi|30387577|gb|AAP31954.1| At5g22220 [Arabidopsis
thaliana] gi|22531281|gb|AAM97144.1| expressed protein
[Arabidopsis thaliana] gi|30688372|ref|NP_851054.1| E2F
transcription factor-1 (E2F1) [Arabidopsis thaliana]
gi|18420430|ref|NP_568413.1| E2F transcription factor-1
(E2F1) [Arabidopsis thaliana] gi|10443849|gb|AAG17608.1|
E2F transcription factor-1 E2F1 [Arabidopsis thaliana]
Length = 469
Score = 94.4 bits (233), Expect = 5e-19
Identities = 60/134 (44%), Positives = 77/134 (56%), Gaps = 17/134 (12%)
Query: 19 QRQL--PFSSMKPPFLAAADYHRFAPDHRRN-----QDLETEAIVVKTPQLKRKSEAADF 71
+RQL SSMKPP +A +YHRF R + ++AIV+K+ LKRK++ +
Sbjct: 13 KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKST-LKRKTDLVNQ 71
Query: 72 EADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNL 131
+ + T +QTPVSGK GK K+SR K N+SGT GSN GSP GNN
Sbjct: 72 IVEVNELNT--------GVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNF 122
Query: 132 TPAGPCRYDSSLGI 145
AG CRYDSSLG+
Sbjct: 123 AQAGTCRYDSSLGL 136
>emb|CAC15485.1| E2F-related protein [Arabidopsis thaliana]
Length = 469
Score = 94.4 bits (233), Expect = 5e-19
Identities = 60/134 (44%), Positives = 77/134 (56%), Gaps = 17/134 (12%)
Query: 19 QRQL--PFSSMKPPFLAAADYHRFAPDHRRN-----QDLETEAIVVKTPQLKRKSEAADF 71
+RQL SSMKPP +A +YHRF R + ++AIV+K+ LKRK++ +
Sbjct: 13 KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKST-LKRKTDLVNQ 71
Query: 72 EADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNL 131
+ + T +QTPVSGK GK K+SR K N+SGT GSN GSP GNN
Sbjct: 72 IVEVNELNT--------GVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNF 122
Query: 132 TPAGPCRYDSSLGI 145
AG CRYDSSLG+
Sbjct: 123 AQAGTCRYDSSLGL 136
>emb|CAB95727.1| transcription factor E2F [Daucus carota]
Length = 431
Score = 90.9 bits (224), Expect = 6e-18
Identities = 57/119 (47%), Positives = 68/119 (56%), Gaps = 3/119 (2%)
Query: 27 MKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAA 86
MKPPF+ + DY+RF + R D E + I+VK+ KRK + S M+P T
Sbjct: 1 MKPPFVPSDDYYRFG-ESRGVADHEADVIIVKSTPSKRKPGNYNEVESSRLSMSPAYTNT 59
Query: 87 ANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
S QTPVSGK G+ S TK S QTP SN GSPS LTPAG CRYDSSLG+
Sbjct: 60 VKSPNQTPVSGKGGRVYGRSNATKSLASVPQTPMSNAGSPS--PLTPAGSCRYDSSLGL 116
>dbj|BAD73815.1| putative E2F homolog [Oryza sativa (japonica cultivar-group)]
Length = 475
Score = 90.5 bits (223), Expect = 8e-18
Identities = 71/165 (43%), Positives = 91/165 (55%), Gaps = 28/165 (16%)
Query: 1 MSGTRTPPATAAPDQIMQQRQ--LPFS-SMKPPFLAAADYHRF----------------- 40
M+G+ PPA A +I+Q + LPF+ S + PF A DYHRF
Sbjct: 1 MAGSGRPPA--AQKKILQSLRPPLPFAASSRSPFAAPNDYHRFPAGGAAAAAASGSGGIG 58
Query: 41 APDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAG 100
A D+E E +V++TPQ ++ E +D A+S D M S A S + TPVSGKA
Sbjct: 59 AGGAGGGGDIE-EGLVIRTPQKRKAPEESDV-AESSDCMIT-SPGFAVSPMLTPVSGKAV 115
Query: 101 KGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
K KS TK N++G QTP SN+GSP N TP G CRYDSSLG+
Sbjct: 116 KTSKSK--TKNNKAGPQTPTSNVGSPL-NPPTPVGTCRYDSSLGL 157
>ref|XP_472427.1| OJ991214_12.14 [Oryza sativa (japonica cultivar-group)]
gi|38344033|emb|CAE01525.2| OJ991214_12.14 [Oryza sativa
(japonica cultivar-group)]
Length = 417
Score = 89.0 bits (219), Expect = 2e-17
Identities = 66/150 (44%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 2 SGTRTPPATAAPDQIMQQRQLPFSS--MKPPFLAA-ADYHRFAPDHRRNQDLETEAIVVK 58
SG PPA + ++QR +P + PF AA DYHRFA R + E IV++
Sbjct: 3 SGGGRPPAAQHIVRSVRQRFVPLPPPLARAPFAAAPGDYHRFAAASRGGEI--EEGIVIR 60
Query: 59 TPQLKRKSEAADFEA-DSGDRM--TPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSG 115
LKRK+ + EA +S +RM +PG T S + TPVSGK + KS M K N++G
Sbjct: 61 RTPLKRKTPCGESEAAESSERMMTSPGFTEGVGSPLMTPVSGKTSRTTKS--MAKFNKAG 118
Query: 116 TQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
QTP SN GSP GN TPA RYD+SLG+
Sbjct: 119 PQTPISNAGSP-GNPSTPAS-SRYDNSLGL 146
>emb|CAB53258.1| E2F protein [Triticum sp.]
Length = 458
Score = 85.5 bits (210), Expect = 2e-16
Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 1 MSGTRTPPATAAPDQIMQQRQLPFSSMKPPFLAAADYHRF----APDHRRNQDLET---- 52
MSG PPA Q ++ + + +PPF + DYHRF P + + +
Sbjct: 1 MSGGGRPPAAQKILQSLRPPPVFSTPSRPPFASPDDYHRFHAPTTPSATGSGGIGSGGVG 60
Query: 53 ----EAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRM 108
E +V++T QLKRK+ + A +T + + TPVSGKA K KS
Sbjct: 61 GDIDEGLVIRT-QLKRKATREENNAAESSDCMIVTTGVTGNPLLTPVSGKAVKNSKSK-- 117
Query: 109 TKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
TK N++G QTP N+GSP N TPAG CRYDSSLG+
Sbjct: 118 TKNNKAGPQTPTPNVGSPL-NPSTPAGTCRYDSSLGL 153
>gb|AAM90620.1| E2F-related transcription factor 1 [Thlaspi caerulescens]
Length = 443
Score = 84.7 bits (208), Expect = 4e-16
Identities = 54/121 (44%), Positives = 68/121 (55%), Gaps = 18/121 (14%)
Query: 25 SSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGST 84
SSMKPP +A +YHRF R + QLKRK++ + + + + + G
Sbjct: 23 SSMKPPLVAPGEYHRFDAAETRGGGA--------SDQLKRKTDMVN-QIEEPNELNTGV- 72
Query: 85 AAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLG 144
+QTPVSGK GK KSSR K N++GTQ GSN GSP GNN A CRYDSSLG
Sbjct: 73 ------LQTPVSGKGGKPKKSSRSVKSNKTGTQASGSNAGSP-GNNFAQA-TCRYDSSLG 124
Query: 145 I 145
+
Sbjct: 125 L 125
>emb|CAC15486.1| E2F-related protein [Arabidopsis thaliana]
gi|42571075|ref|NP_973611.1| E2F transcription factor-3
(E2F3) [Arabidopsis thaliana]
Length = 485
Score = 82.8 bits (203), Expect = 2e-15
Identities = 61/154 (39%), Positives = 79/154 (50%), Gaps = 23/154 (14%)
Query: 8 PATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQ------------DLETEAI 55
P T+ P +R L F+S KPPF + DYHRF P N D E +A+
Sbjct: 28 PVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAV 87
Query: 56 VVKTPQLKRKSEAADFEADSGDRMT-PGSTAAANSSVQTPVSGKAGKGGKSSRMTKC--N 112
VV++P KRK+ A S + T G T +S QTP KGG+ + +K N
Sbjct: 88 VVRSPSRKRKATMDMVVAPSNNGFTSSGFTNIPSSPCQTP-----RKGGRVNIKSKAKGN 142
Query: 113 RSGTQTP-GSNIGSPSGNNLTPAGPCRYDSSLGI 145
+S QTP +N GSP LTP+G CRYDSSLG+
Sbjct: 143 KSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 174
>emb|CAC34724.1| E2F-4 protein [Arabidopsis thaliana]
Length = 485
Score = 82.8 bits (203), Expect = 2e-15
Identities = 61/154 (39%), Positives = 79/154 (50%), Gaps = 23/154 (14%)
Query: 8 PATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQ------------DLETEAI 55
P T+ P +R L F+S KPPF + DYHRF P N D E +A+
Sbjct: 28 PVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAV 87
Query: 56 VVKTPQLKRKSEAADFEADSGDRMT-PGSTAAANSSVQTPVSGKAGKGGKSSRMTKC--N 112
VV++P KRK+ A S + T G T +S QTP KGG+ + +K N
Sbjct: 88 VVRSPSRKRKATMDMVVAPSNNGFTSSGFTNIPSSPCQTP-----RKGGRVNIKSKAKGN 142
Query: 113 RSGTQTP-GSNIGSPSGNNLTPAGPCRYDSSLGI 145
+S QTP +N GSP LTP+G CRYDSSLG+
Sbjct: 143 KSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 174
>gb|AAD21456.2| putative E2F5 family transcription factor [Arabidopsis thaliana]
gi|10443853|gb|AAG17610.1| E2F transcription factor-3
E2F3 [Arabidopsis thaliana] gi|42569659|ref|NP_565831.3|
E2F transcription factor-3 (E2F3) [Arabidopsis thaliana]
Length = 483
Score = 82.8 bits (203), Expect = 2e-15
Identities = 61/154 (39%), Positives = 79/154 (50%), Gaps = 23/154 (14%)
Query: 8 PATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQ------------DLETEAI 55
P T+ P +R L F+S KPPF + DYHRF P N D E +A+
Sbjct: 28 PVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAV 87
Query: 56 VVKTPQLKRKSEAADFEADSGDRMT-PGSTAAANSSVQTPVSGKAGKGGKSSRMTKC--N 112
VV++P KRK+ A S + T G T +S QTP KGG+ + +K N
Sbjct: 88 VVRSPSRKRKATMDMVVAPSNNGFTSSGFTNIPSSPCQTP-----RKGGRVNIKSKAKGN 142
Query: 113 RSGTQTP-GSNIGSPSGNNLTPAGPCRYDSSLGI 145
+S QTP +N GSP LTP+G CRYDSSLG+
Sbjct: 143 KSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 174
>dbj|BAB17029.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 391
Score = 73.6 bits (179), Expect = 1e-12
Identities = 37/62 (59%), Positives = 43/62 (68%), Gaps = 1/62 (1%)
Query: 84 TAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSL 143
+A+ +QTPVSGK GK K+SR K N+SGT GSN GSP GNN AG CRYDSSL
Sbjct: 1 SASVAGVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNFAQAGTCRYDSSL 59
Query: 144 GI 145
G+
Sbjct: 60 GL 61
>dbj|BAD27913.1| E2F homolog [Oryza sativa (japonica cultivar-group)]
gi|12225043|dbj|BAB20932.1| E2F homolog [Oryza sativa]
Length = 436
Score = 70.1 bits (170), Expect = 1e-11
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 49 DLETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRM 108
D + +AI+ + Q KRK+ A+S D M S A S + TPVSGKA K KS
Sbjct: 28 DYKIQAIL--SSQQKRKAPEESDVAESSDCMIT-SPGFAVSPMLTPVSGKAVKTSKSK-- 82
Query: 109 TKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
TK N++G QTP SN+GSP N TP G CRYDSSLG+
Sbjct: 83 TKNNKAGPQTPTSNVGSPL-NPPTPVGTCRYDSSLGL 118
>dbj|BAB20933.1| E2F homolog [Oryza sativa]
Length = 393
Score = 64.7 bits (156), Expect = 4e-10
Identities = 41/86 (47%), Positives = 50/86 (57%), Gaps = 4/86 (4%)
Query: 62 LKRKSEAADFEA-DSGD-RMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTP 119
LKRK + + EA +S D M+PG T A S V TP+SGK K S+ K +S QTP
Sbjct: 1 LKRKHDREENEAAESNDWMMSPGYTNPAGSPVPTPLSGKGSKAFAKSKAAKGQKSCPQTP 60
Query: 120 GSNIGSPSGNNLTPAGPCRYDSSLGI 145
S GN +TP G CRYDSSLG+
Sbjct: 61 --LCASSPGNPVTPVGGCRYDSSLGL 84
>emb|CAD21953.1| putative E2F transcription factor [Physcomitrella patens]
Length = 400
Score = 50.8 bits (120), Expect = 7e-06
Identities = 32/85 (37%), Positives = 48/85 (55%), Gaps = 5/85 (5%)
Query: 62 LKRKSEAADFEADSGDRMTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPG- 120
+KR++E + + G T + S TP +G G+G ++ + K ++G QTPG
Sbjct: 1 MKRRNECEEHHVEMNG--WNGYTNSDLSPAPTP-TGPRGRGSRA-KTVKQTKNGPQTPGP 56
Query: 121 SNIGSPSGNNLTPAGPCRYDSSLGI 145
S IGSP+ + TP CRYDSSLG+
Sbjct: 57 SGIGSPTSSAPTPTSTCRYDSSLGL 81
>pir||G84775 probable E2F5 family transcription factor [imported] - Arabidopsis
thaliana
Length = 532
Score = 50.1 bits (118), Expect = 1e-05
Identities = 57/211 (27%), Positives = 75/211 (35%), Gaps = 73/211 (34%)
Query: 8 PATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQ------------DLETEAI 55
P T+ P +R L F+S KPPF + DYHRF P N D E +A+
Sbjct: 28 PVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAV 87
Query: 56 VVKTP--------------------------------------------------QLKRK 65
VV++P KRK
Sbjct: 88 VVRSPIFPSEIGLEIRGCFGDFDCYLLLLSLIQKLRSVRLSSIRVNFCRLFSFAMSRKRK 147
Query: 66 SEAADFEADSGDRMT-PGSTAAANSSVQTPVSG------KAGKGGKSSRMTKCN----RS 114
+ A S + T G T +S QTP G KG KS+ T + RS
Sbjct: 148 ATMDMVVAPSNNGFTSSGFTNIPSSPCQTPRKGGRVNIKSKAKGNKSTPQTPISTNAVRS 207
Query: 115 GTQTPGSNIGSPSGNNLTPAGPCRYDSSLGI 145
+ + + S LTP+G CRYDSSLG+
Sbjct: 208 FYEISFMSRVTSSPITLTPSGSCRYDSSLGL 238
>emb|CAB70599.1| E2F-like protein [Arabidopsis thaliana]
gi|42571073|ref|NP_973610.1| E2F transcription factor-3
(E2F3) [Arabidopsis thaliana]
Length = 514
Score = 41.6 bits (96), Expect = 0.004
Identities = 24/65 (36%), Positives = 32/65 (48%), Gaps = 12/65 (18%)
Query: 8 PATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQ------------DLETEAI 55
P T+ P +R L F+S KPPF + DYHRF P N D E +A+
Sbjct: 28 PVTSTPVIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAV 87
Query: 56 VVKTP 60
VV++P
Sbjct: 88 VVRSP 92
>gb|AAG31445.1| defective in exine formation [Arabidopsis thaliana]
Length = 896
Score = 40.0 bits (92), Expect = 0.012
Identities = 38/138 (27%), Positives = 58/138 (41%), Gaps = 12/138 (8%)
Query: 2 SGTRTPPATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQ 61
S T+T T P+ + SM A Y D +R ++ +TEAIV TP+
Sbjct: 199 STTQTNATTTTPNVTV--------SMTKEVHGANSYVSIQEDQKRPENNQTEAIVKPTPE 250
Query: 62 LKRKSEAADFEADSGDRMTPGSTAAANSSVQT-PVSGKAGKGGKSSRMTKCNRS---GTQ 117
L S A + + T GS N +V T V G K+ + K N S ++
Sbjct: 251 LHNSSMDAGANNLAANATTAGSRENLNRNVTTNEVDQSKISGDKNETVIKLNTSTGNSSE 310
Query: 118 TPGSNIGSPSGNNLTPAG 135
T G++ S + +T +G
Sbjct: 311 TLGTSGNSSTAETVTKSG 328
>gb|AAD56325.1| unknown protein [Arabidopsis thaliana]
Length = 907
Score = 39.3 bits (90), Expect = 0.020
Identities = 38/138 (27%), Positives = 58/138 (41%), Gaps = 12/138 (8%)
Query: 2 SGTRTPPATAAPDQIMQQRQLPFSSMKPPFLAAADYHRFAPDHRRNQDLETEAIVVKTPQ 61
S T+T T P+ + SM A Y D +R ++ +TEAIV TP+
Sbjct: 199 STTQTNATTTTPNVTV--------SMTKEVHGANSYVSTQEDQKRPENNQTEAIVKPTPE 250
Query: 62 LKRKSEAADFEADSGDRMTPGSTAAANSSVQT-PVSGKAGKGGKSSRMTKCNRS---GTQ 117
L S A + + T GS N +V T V G K+ + K N S ++
Sbjct: 251 LHNSSMDAGANNLAANATTAGSRENLNRNVTTNEVDQSKISGDKNETVIKLNTSTGNSSE 310
Query: 118 TPGSNIGSPSGNNLTPAG 135
T G++ S + +T +G
Sbjct: 311 TLGTSGNSSTAETVTKSG 328
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.309 0.125 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 275,226,524
Number of Sequences: 2540612
Number of extensions: 11098706
Number of successful extensions: 36444
Number of sequences better than 10.0: 435
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 35844
Number of HSP's gapped (non-prelim): 848
length of query: 146
length of database: 863,360,394
effective HSP length: 122
effective length of query: 24
effective length of database: 553,405,730
effective search space: 13281737520
effective search space used: 13281737520
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146557.5