Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146554.5 + phase: 0 
         (236 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP37667.1| At5g25160 [Arabidopsis thaliana] gi|15238724|ref|...    66  7e-10
gb|AAK32798.1| At1g66140/F15E12_19 [Arabidopsis thaliana] gi|152...    63  8e-09
pir||S55884 CCHH finger protein 4 - Arabidopsis thaliana gi|7906...    63  8e-09
ref|NP_178188.1| zinc finger (C2H2 type) family protein (ZFP1) [...    62  1e-08
emb|CAB82756.1| putative zinc finger protein [Arabidopsis thalia...    62  2e-08
gb|AAT08007.1| putative zinc finger protein [Zea mays]                 62  2e-08
emb|CAB96852.1| zinc finger-like protein [Arabidopsis thaliana] ...    61  3e-08
dbj|BAB08787.1| CCHH finger protein 2-like protein [Arabidopsis ...    59  1e-07
gb|AAB63548.1| putative C2H2-type zinc finger protein [Arabidops...    59  1e-07
ref|XP_481229.1| hypothetical protein [Oryza sativa (japonica cu...    58  2e-07
ref|XP_478980.1| unknown protein [Oryza sativa (japonica cultiva...    58  2e-07
dbj|BAD33795.1| hypothetical protein [Oryza sativa (japonica cul...    58  3e-07
dbj|BAC43594.1| putative zinc finger protein ZFP7 [Arabidopsis t...    57  3e-07
gb|AAA87304.1| zinc finger protein                                     57  4e-07
pir||S55888 CCHH finger protein 8 - Arabidopsis thaliana               57  4e-07
ref|XP_466262.1| hypothetical protein [Oryza sativa (japonica cu...    57  6e-07
dbj|BAD38321.1| zinc finger protein-like [Oryza sativa (japonica...    57  6e-07
ref|NP_198140.1| zinc finger (C2H2 type) family protein [Arabido...    56  1e-06
dbj|BAD45946.1| hypothetical protein [Oryza sativa (japonica cul...    56  1e-06
ref|XP_482820.1| putative zinc finger protein [Oryza sativa (jap...    55  2e-06

>gb|AAP37667.1| At5g25160 [Arabidopsis thaliana] gi|15238724|ref|NP_197898.1| zinc
           finger (C2H2 type) family protein (ZFP3) [Arabidopsis
           thaliana] gi|4063732|gb|AAC98442.1| ZFP3 zinc finger
           protein [Arabidopsis thaliana] gi|1362016|pir||S55883
           CCHH finger protein 3 - Arabidopsis thaliana
           gi|790677|gb|AAA87299.1| zinc finger protein
           gi|27923889|sp|Q39262|ZFP3_ARATH Zinc finger protein 3
          Length = 235

 Score = 66.2 bits (160), Expect = 7e-10
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 14/100 (14%)

Query: 47  EQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQ 106
           EQK+  FSCNYC + F +SQALGGHQNAHKRER L K   R       +    S+F H  
Sbjct: 57  EQKL--FSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQR-------MAASASAFGHPY 107

Query: 107 GHS---YFRSANLHNPIGVHVTNAFPSWIGSPYGGYGGVY 143
           G S   +    N H  +G+   +   S   S Y G+GG Y
Sbjct: 108 GFSPLPFHGQYNNHRSLGIQAHSI--SHKLSSYNGFGGHY 145


>gb|AAK32798.1| At1g66140/F15E12_19 [Arabidopsis thaliana]
           gi|15218939|ref|NP_176788.1| zinc finger (C2H2 type)
           family protein [Arabidopsis thaliana]
           gi|16604378|gb|AAL24195.1| At1g66140/F15E12_19
           [Arabidopsis thaliana] gi|15810083|gb|AAL06967.1|
           At1g66140/F15E12_19 [Arabidopsis thaliana]
           gi|12322602|gb|AAG51296.1| C2H2-type zinc finger
           protein, putative [Arabidopsis thaliana]
           gi|25404589|pir||B96686 probable C2H2-type zinc finger
           protein F15E12.19 [imported] - Arabidopsis thaliana
           gi|27923890|sp|Q39263|ZFP4_ARATH Zinc finger protein 4
          Length = 260

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 17  LGTHTKSTSKPLENGGHSSS-FQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAH 75
           L   + S + PL +   SS+  Q    +P   ++V  FSCNYC +KF +SQALGGHQNAH
Sbjct: 50  LDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRV--FSCNYCQRKFYSSQALGGHQNAH 107

Query: 76  KRERVLKK 83
           KRER L K
Sbjct: 108 KRERTLAK 115


>pir||S55884 CCHH finger protein 4 - Arabidopsis thaliana
           gi|790679|gb|AAA87300.1| zinc finger protein
          Length = 259

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 17  LGTHTKSTSKPLENGGHSSS-FQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAH 75
           L   + S + PL +   SS+  Q    +P   ++V  FSCNYC +KF +SQALGGHQNAH
Sbjct: 50  LDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRV--FSCNYCQRKFYSSQALGGHQNAH 107

Query: 76  KRERVLKK 83
           KRER L K
Sbjct: 108 KRERTLAK 115


>ref|NP_178188.1| zinc finger (C2H2 type) family protein (ZFP1) [Arabidopsis
           thaliana] gi|6503285|gb|AAF14661.1| Identical to
           gi|S55881 zinc finger protein 1 from Arabidopsis
           thaliana gi|1362015|pir||S55881 CCHH finger protein 1 -
           Arabidopsis thaliana gi|1297186|gb|AAA98913.1| zinc
           finger protein 1 gi|27923894|sp|Q42485|ZFP1_ARATH Zinc
           finger protein 1 gi|790673|gb|AAA87297.1| zinc finger
           protein
          Length = 228

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 50/135 (37%), Positives = 67/135 (49%), Gaps = 21/135 (15%)

Query: 15  LRLGTHTKSTSKPLEN---GGHSSSFQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGH 71
           L  GT T S    +++      S+S      E L + +V  FSCNYC +KF +SQALGGH
Sbjct: 29  LSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRV--FSCNYCQRKFYSSQALGGH 86

Query: 72  QNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYFR-----------SANLHNPI 120
           QNAHKRER L K   R +  +M L+   SS   +   S  R           S N  + +
Sbjct: 87  QNAHKRERTLAK---RGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTL 143

Query: 121 GV--HVTNAFPSWIG 133
           G+  H T   PS++G
Sbjct: 144 GIQAHSTIHKPSFLG 158


>emb|CAB82756.1| putative zinc finger protein [Arabidopsis thaliana]
           gi|15241084|ref|NP_195806.1| zinc finger (C2H2 type)
           family protein [Arabidopsis thaliana]
           gi|11358704|pir||T48207 probable zinc finger protein -
           Arabidopsis thaliana
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 15/138 (10%)

Query: 19  THTKSTSKPLENGGHSSSFQNTLDEPLP--EQKVVEFSCNYCDKKFSTSQALGGHQNAHK 76
           T  + T++P +       F+   +E     E K   F+C +C K+FSTSQALGGHQNAHK
Sbjct: 31  TKEEVTAEPSKENQQRLEFRFLFNESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHK 90

Query: 77  RERVLKKMEDRRREEEMDLTLRFSSFIHY--QGHSYFRSAN------LHNPIGVHVTNAF 128
           +ER L K   RR+E E++     S +  Y   G S+  S++       +NP     T  +
Sbjct: 91  QERSLAK---RRKEIEINYP-ELSIYSQYPPSGLSFSSSSSQYDLGVRYNPNIAKTTKPY 146

Query: 129 PSWIGSPYGGY-GGVYMP 145
           P  I +   GY GG+  P
Sbjct: 147 PFNIFACRFGYRGGLNFP 164


>gb|AAT08007.1| putative zinc finger protein [Zea mays]
          Length = 303

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 39/98 (39%), Positives = 49/98 (49%), Gaps = 18/98 (18%)

Query: 52  EFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYF 111
           +F C+YC + F TSQALGGHQNAHKRER       RR   E       +SF  + G +Y 
Sbjct: 71  KFECHYCCRNFPTSQALGGHQNAHKRER----QHARRAHLE-------ASFAAHCGAAYL 119

Query: 112 RSANLHNPIGV-------HVTNAFPSWIGSPYGGYGGV 142
             A+L+   G        H  +    W G+  G YGGV
Sbjct: 120 PGAHLYGLFGYGGGGGGGHTAHYPAVWAGAAPGIYGGV 157


>emb|CAB96852.1| zinc finger-like protein [Arabidopsis thaliana]
           gi|15238913|ref|NP_196658.1| zinc finger (C2H2 type)
           family protein [Arabidopsis thaliana]
           gi|11358935|pir||T50806 zinc finger-like protein -
           Arabidopsis thaliana
          Length = 272

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 47/122 (38%), Positives = 57/122 (46%), Gaps = 25/122 (20%)

Query: 28  LENGGHSSSFQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDR 87
           LE G  + SF  +      EQK+  FSCNYC + F +SQALGGHQNAHKRER L K    
Sbjct: 84  LETGVVTPSFNGSTST---EQKL--FSCNYCQRTFYSSQALGGHQNAHKRERTLAK---- 134

Query: 88  RREEEMDLTLRFSSFIHYQGHSY------FRSANLHNPIGVHVTNAFPSWIGSPYGGYGG 141
            R + M     F       GH Y      F     +  +G+   +   S   S Y  YGG
Sbjct: 135 -RGQRMASAAAF-------GHPYGFAPVPFHGQYSNRTLGIQAHSM--SHKPSSYNVYGG 184

Query: 142 VY 143
            Y
Sbjct: 185 EY 186


>dbj|BAB08787.1| CCHH finger protein 2-like protein [Arabidopsis thaliana]
          gi|15242152|ref|NP_200560.1| zinc finger (C2H2 type)
          family protein (ZFP2) [Arabidopsis thaliana]
          gi|1361986|pir||S55882 CCHH finger protein 2 -
          Arabidopsis thaliana gi|27923888|sp|Q39261|ZFP2_ARATH
          Zinc finger protein 2 gi|790675|gb|AAA87298.1| zinc
          finger protein
          Length = 150

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 34 SSSFQNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKK 83
          SSS  +T      EQ  V FSCNYC +KF +SQALGGHQNAHK ER L K
Sbjct: 34 SSSSSSTNSSSCLEQPRV-FSCNYCQRKFYSSQALGGHQNAHKLERTLAK 82


>gb|AAB63548.1| putative C2H2-type zinc finger protein [Arabidopsis thaliana]
           gi|15810111|gb|AAL06981.1| At2g41940/T6D20.16
           [Arabidopsis thaliana] gi|14517524|gb|AAK62652.1|
           At2g41940/T6D20.16 [Arabidopsis thaliana]
           gi|25408767|pir||A84848 probable C2H2-type zinc finger
           protein [imported] - Arabidopsis thaliana
           gi|15227472|ref|NP_181725.1| zinc finger (C2H2 type)
           family protein [Arabidopsis thaliana]
          Length = 257

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 37/121 (30%), Positives = 51/121 (41%), Gaps = 14/121 (11%)

Query: 53  FSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYFR 112
           F C+YC + F TSQALGGHQNAHKRER   K                +S++H+  H    
Sbjct: 95  FECHYCFRNFPTSQALGGHQNAHKRERQHAKRGS------------MTSYLHH--HQPHD 140

Query: 113 SANLHNPIGVHVTNAFPSWIGSPYGGYGGVYMPNTPLATRYVMQMPNSPQATPQFGMTNF 172
             +++  +  H    +PSW       YGG         +R  +  P+S   T        
Sbjct: 141 PHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGL 200

Query: 173 W 173
           W
Sbjct: 201 W 201


>ref|XP_481229.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|37805899|dbj|BAC99748.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 306

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 25/31 (80%), Positives = 26/31 (83%)

Query: 53  FSCNYCDKKFSTSQALGGHQNAHKRERVLKK 83
           F CNYC +KF TSQALGGHQNAHKRER L K
Sbjct: 107 FKCNYCQRKFYTSQALGGHQNAHKRERSLAK 137


>ref|XP_478980.1| unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|29027767|dbj|BAC65903.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 188

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 20/100 (20%)

Query: 9   VEDFLTLRLGTHTKSTSKPLENGGHSSSFQNTLDEPLPEQKVVEFSCNYCDKKFSTSQAL 68
           V D LT   G   +S  KP     H +                 FSCNYC +KF +SQAL
Sbjct: 32  VVDALTAEAGKLPESNPKPAVAAPHRT-----------------FSCNYCMRKFFSSQAL 74

Query: 69  GGHQNAHKRERVLKKMEDRRREEEMDLTL---RFSSFIHY 105
           GGHQNAHKRER   +     +++ + + L     SSF+H+
Sbjct: 75  GGHQNAHKRERCAPRKSHGFQQQHLMVGLSPTAPSSFLHH 114


>dbj|BAD33795.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 152

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 31/48 (64%), Positives = 34/48 (70%), Gaps = 4/48 (8%)

Query: 44 PLPEQKVVEFS-CNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRRE 90
          P PE  +V F  C YCD+KF +SQALGGHQNAHK ER L K   RRRE
Sbjct: 24 PSPEPPLVGFFLCMYCDRKFDSSQALGGHQNAHKYERSLAK---RRRE 68


>dbj|BAC43594.1| putative zinc finger protein ZFP7 [Arabidopsis thaliana]
          gi|28973449|gb|AAO64049.1| putative zinc finger protein
          7, ZFP7 [Arabidopsis thaliana]
          gi|18395528|ref|NP_564223.1| zinc finger (C2H2 type)
          family protein (ZFP7) [Arabidopsis thaliana]
          gi|1362021|pir||S55887 CCHH finger protein 7 -
          Arabidopsis thaliana gi|9945081|gb|AAG03118.1| F5A9.25
          [Arabidopsis thaliana] gi|790685|gb|AAA87303.1| zinc
          finger protein gi|9743348|gb|AAF97972.1| F21J9.29
          [Arabidopsis thaliana] gi|27923893|sp|Q39266|ZFP7_ARATH
          Zinc finger protein 7
          Length = 209

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 24/31 (77%), Positives = 27/31 (86%)

Query: 53 FSCNYCDKKFSTSQALGGHQNAHKRERVLKK 83
          FSCNYC +KF +SQALGGHQNAHKRER + K
Sbjct: 59 FSCNYCRRKFYSSQALGGHQNAHKRERTMAK 89


>gb|AAA87304.1| zinc finger protein
          Length = 239

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 43/89 (47%), Gaps = 14/89 (15%)

Query: 53  FSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYFR 112
           F C+YC + F TSQALGGHQNAHKRER   K                +S++H+  H    
Sbjct: 93  FECHYCFRNFPTSQALGGHQNAHKRERQHAKRGS------------MTSYLHH--HQPHD 138

Query: 113 SANLHNPIGVHVTNAFPSWIGSPYGGYGG 141
             +++  +  H    +PSW       YGG
Sbjct: 139 PHHIYGFLNNHHHRHYPSWTTEARSYYGG 167


>pir||S55888 CCHH finger protein 8 - Arabidopsis thaliana
          Length = 228

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 43/89 (47%), Gaps = 14/89 (15%)

Query: 53  FSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYFR 112
           F C+YC + F TSQALGGHQNAHKRER   K                +S++H+  H    
Sbjct: 82  FECHYCFRNFPTSQALGGHQNAHKRERQHAKRGS------------MTSYLHH--HQPHD 127

Query: 113 SANLHNPIGVHVTNAFPSWIGSPYGGYGG 141
             +++  +  H    +PSW       YGG
Sbjct: 128 PHHIYGFLNNHHHRHYPSWTTEARSYYGG 156


>ref|XP_466262.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
           gi|46391019|dbj|BAD16553.1| hypothetical protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 174

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 40  TLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLR 98
           +L    P +   EFSC YC K+F +SQALGGHQNAHK +R L K   R RE  + ++ R
Sbjct: 46  SLQPSYPSRFQTEFSCCYCPKRFQSSQALGGHQNAHKLQRNLAK---RNREAFLSISQR 101


>dbj|BAD38321.1| zinc finger protein-like [Oryza sativa (japonica cultivar-group)]
          Length = 296

 Score = 56.6 bits (135), Expect = 6e-07
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 12/118 (10%)

Query: 52  EFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFIHYQGHSYF 111
           +F C+YC + F TSQALGGHQNAHKRER     +  +R +        + +  Y  ++ +
Sbjct: 71  KFECHYCCRNFPTSQALGGHQNAHKRER-----QHAKRAQFQSAMAMHAHYPAYPAYASY 125

Query: 112 RSANLHNPIGVHVT----NAFPSWIGSPYGGYGGVYMPNTPLATRYVMQMPNSPQATP 165
             ++   P   H+       +PSW    +   GG   P   +A RY    P    + P
Sbjct: 126 YGSHRFGPSPPHMAPPPPPPYPSWSNHHHLPPGG---PAPMVAARYYGPAPPGSVSHP 180


>ref|NP_198140.1| zinc finger (C2H2 type) family protein [Arabidopsis thaliana]
          Length = 278

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 7/84 (8%)

Query: 15  LRLGTHTKSTS-KPLENGGHSSSFQNTLDEPL---PEQKVVEFSCNYCDKKFSTSQALGG 70
           L+LG+  + TS + +EN    SS      E +   P +    ++C++C K FSTSQALGG
Sbjct: 38  LKLGSPQEVTSERRIENSSFGSSAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGG 97

Query: 71  HQNAHKRERVLKKMEDRRREEEMD 94
           HQNAHK+ER   + + +R+E E +
Sbjct: 98  HQNAHKQER---EWDKKRKEMEAE 118


>dbj|BAD45946.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 165

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)

Query: 53 FSCNYCDKKFSTSQALGGHQNAHKRERVLKK 83
          FSCNYC +KF +SQALGGHQNAHK ER L K
Sbjct: 49 FSCNYCHRKFFSSQALGGHQNAHKLERTLAK 79


>ref|XP_482820.1| putative zinc finger protein [Oryza sativa (japonica
           cultivar-group)] gi|42409376|dbj|BAD10690.1| putative
           zinc finger protein [Oryza sativa (japonica
           cultivar-group)] gi|42409062|dbj|BAD10314.1| putative
           zinc finger protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 300

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 39/124 (31%), Positives = 56/124 (44%), Gaps = 21/124 (16%)

Query: 52  EFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEM------------DLTLRF 99
           +F C+YC + F TSQALGGHQNAHKRER   K    +    M                 F
Sbjct: 98  KFECHYCCRNFPTSQALGGHQNAHKRERQRAKHAQFQTAMAMHHGHGQYYPLPDPYAAAF 157

Query: 100 SSFI-HYQGHSYFRSANLHNPIGVHVTNAFPSWIGSP--YGGYGGVYMP--NTPLATRYV 154
           +++  H+  H +  +A    P   H    +PSW      Y G G +  P   +P+A   +
Sbjct: 158 AAYPGHHHHHRFAATAAAAMPPPPH----YPSWAAGSRYYSGPGSISQPINGSPVAPAGM 213

Query: 155 MQMP 158
            ++P
Sbjct: 214 WRLP 217


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.315    0.132    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 433,945,528
Number of Sequences: 2540612
Number of extensions: 19529419
Number of successful extensions: 92199
Number of sequences better than 10.0: 709
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 87754
Number of HSP's gapped (non-prelim): 4495
length of query: 236
length of database: 863,360,394
effective HSP length: 124
effective length of query: 112
effective length of database: 548,324,506
effective search space: 61412344672
effective search space used: 61412344672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 73 (32.7 bits)


Medicago: description of AC146554.5