BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146551.5 + phase: 0
(606 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC24177.1| hypothetical protein [Arabidopsis thaliana] gi|15... 691 0.0
gb|AAR00589.1| putative NPH3 family protein [Oryza sativa (japon... 632 e-180
gb|AAM91121.1| photoreceptor-interacting protein-like [Arabidops... 524 e-147
dbj|BAB09029.1| photoreceptor-interacting protein-like [Arabidop... 524 e-147
emb|CAB80424.1| putative protein [Arabidopsis thaliana] gi|44689... 521 e-146
ref|NP_568030.1| phototropic-responsive NPH3 family protein [Ara... 521 e-146
gb|AAM10059.1| putative protein [Arabidopsis thaliana] gi|154511... 520 e-146
dbj|BAD33627.1| putative RPT2 [Oryza sativa (japonica cultivar-g... 498 e-139
gb|AAM76746.1| hypothetical protein [Arabidopsis thaliana] gi|61... 489 e-136
dbj|BAD72520.1| non-phototropic hypocotyl 3-like [Oryza sativa (... 471 e-131
gb|AAM13843.1| unknown protein [Arabidopsis thaliana] 440 e-122
gb|AAN13030.1| unknown protein [Arabidopsis thaliana] gi|2232906... 440 e-122
gb|AAP68226.1| At1g67900 [Arabidopsis thaliana] gi|21539469|gb|A... 395 e-108
emb|CAB79900.1| putative protein [Arabidopsis thaliana] gi|45845... 388 e-106
gb|AAL73542.1| putative photoreceptor-interacting protein [Sorgh... 353 7e-96
ref|XP_479933.1| putative non-phototropic hypocotyl 3 (NPH3)/pho... 351 3e-95
dbj|BAB02210.1| unnamed protein product [Arabidopsis thaliana] g... 338 3e-91
gb|AAP04068.1| putative photoreceptor-interacting protein [Arabi... 337 7e-91
gb|AAT85278.1| NPH3 family protein [Oryza sativa (japonica culti... 333 1e-89
emb|CAE05861.1| OSJNBa0044K18.3 [Oryza sativa (japonica cultivar... 330 1e-88
>gb|AAC24177.1| hypothetical protein [Arabidopsis thaliana]
gi|15226012|ref|NP_179089.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
gi|7486189|pir||T02594 hypothetical protein At2g14820
[imported] - Arabidopsis thaliana
Length = 634
Score = 691 bits (1782), Expect = 0.0
Identities = 370/625 (59%), Positives = 475/625 (75%), Gaps = 32/625 (5%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
RYV +ELASDI V + ++F LHKFPL+SK + LQKL+S ++ NI++I IS IPGG +A
Sbjct: 21 RYVENELASDISVDVEGSRFCLHKFPLLSKCACLQKLLSSTDKNNIDDIDISGIPGGPTA 80
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FE CAKFCYGMTVTL+AYNV+ATRCAAEYLGMHE +EKGNL++KIDVFLSSS+FRSWKDS
Sbjct: 81 FETCAKFCYGMTVTLSAYNVVATRCAAEYLGMHETVEKGNLIYKIDVFLSSSLFRSWKDS 140
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II+LQTTK PL E+ K+V+ CI++IA KACVDVS V+WSYTYN+KKL EEN + +
Sbjct: 141 IIVLQTTKPFLPLSEDLKLVSLCIDAIATKACVDVSHVEWSYTYNKKKLAEEN---NGAD 197
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
++ R+VP DWWVEDLCELE+D YK VI NIKTK I +VIGEALKAY YR+L F+KG
Sbjct: 198 SIKARDVPHDWWVEDLCELEIDYYKRVIMNIKTKCILGGEVIGEALKAYGYRRLSGFNKG 257
Query: 243 MIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVKRIGQQ 302
++ D+ KH+ I+ET+V LLP++K SVSC FL+KLLKAV V S + +++ LV+RIGQQ
Sbjct: 258 VMEQGDLVKHKTIIETLVWLLPAEKNSVSCGFLLKLLKAVTMVNSGEVVKEQLVRRIGQQ 317
Query: 303 LEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIEL---VGGGELEGIRK-P 358
LEEAS+ ++LIK+ G T+YDV +VQKIV EF+ +D NSEIE+ G E++ +RK P
Sbjct: 318 LEEASMAELLIKSHQGSETLYDVDLVQKIVMEFMRRDKNSEIEVQDDEDGFEVQEVRKLP 377
Query: 359 GILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLK 418
GILS+ASKLMVAK+ID YL EIAKDPNLP F+++AE V+ I RP+HD LYRAID +LK
Sbjct: 378 GILSEASKLMVAKVIDSYLTEIAKDPNLPASKFIDVAESVTSIPRPAHDALYRAIDMFLK 437
Query: 419 EHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTST 478
EHPGI+KGEKK +C+LMDCRKLSV+A +HAVQN+RLP RV+VQVL FEQVR AASSG+ST
Sbjct: 438 EHPGITKGEKKRMCKLMDCRKLSVEACMHAVQNDRLPLRVVVQVLFFEQVRAAASSGSST 497
Query: 479 PDIAKGI-KDL-SIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSF 536
PD+ +G+ ++L S G+ GSSRS T E + + T EE++AL+ E+A+L+
Sbjct: 498 PDLPRGMGRELRSCGTYGSSRSVPTVMEDEWEAVATEEEMRALKSEIAALK--------L 549
Query: 537 KDGDAKPNMDKA---VIGKMKGLLKSKKSF---IKLWASKGGH----GENSGSDSSESIG 586
++ + +MD+A I K++ L+ SKK F ++L + GG G GSDSSES+G
Sbjct: 550 QEESGRKSMDRAGVTAISKIRSLIMSKKIFGKKVQLQSKGGGEKNNGGGGGGSDSSESLG 609
Query: 587 SVNPEE---VKSTPSRN--RRNSVS 606
S+N E +TPSRN RR SVS
Sbjct: 610 SMNAAEETAKTATPSRNLTRRVSVS 634
>gb|AAR00589.1| putative NPH3 family protein [Oryza sativa (japonica
cultivar-group)] gi|51964272|ref|XP_506921.1| PREDICTED
OSJNBa0034J04.14 gene product [Oryza sativa (japonica
cultivar-group)] gi|50901436|ref|XP_463151.1| putative
NPH3 family protein (with alternative splicing) [Oryza
sativa (japonica cultivar-group)]
gi|62733727|gb|AAX95837.1| transposon protein, putative,
mutator sub-class [Oryza sativa (japonica
cultivar-group)] gi|40539093|gb|AAR87349.1| transposon
protein, putative, mutator sub-class [Oryza sativa
(japonica cultivar-group)]
Length = 634
Score = 632 bits (1631), Expect = e-180
Identities = 344/618 (55%), Positives = 438/618 (70%), Gaps = 18/618 (2%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
R+VA+ELA+DI++SIGD KF LHKFPL+SKSS LQ+L + +N E E+ ISDIPGG SA
Sbjct: 21 RFVATELATDIVISIGDVKFCLHKFPLLSKSSCLQRLAASSNVEGNEELDISDIPGGPSA 80
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FEICAKFCYGM VTLNAYNV+A RCAAEYL M E IEKGNL++KIDVFL+SSIFR+WKDS
Sbjct: 81 FEICAKFCYGMIVTLNAYNVLAARCAAEYLEMFETIEKGNLIYKIDVFLTSSIFRAWKDS 140
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II+LQ+TKS+ P E KV+N CI+SIA+KA +D S+V+WSYTYNRKKLP ENG +S+ N
Sbjct: 141 IIVLQSTKSLLPWSENLKVINHCIDSIASKALIDPSEVEWSYTYNRKKLPSENGHDSHWN 200
Query: 183 GVRTR-NVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRK-LPNFS 240
GVR + VPKDWWVEDLC+LE+D+YK VI IK K S VIGEAL+AYAYR+ L +
Sbjct: 201 GVRKQLIVPKDWWVEDLCDLEMDLYKRVIMMIKAKGRTSPIVIGEALRAYAYRRLLGSLE 260
Query: 241 KGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVKRIG 300
+ D +K R ++ETI+ LLP++KGSVSC FL+KLLKA +E+ + D+L+KRIG
Sbjct: 261 DAVSNGVDCTKRRAVLETIIFLLPTEKGSVSCGFLLKLLKAACLLEAGESCHDILIKRIG 320
Query: 301 QQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNS-EIELVGGGELEGIRKPG 359
QL+ ASV+D+LI A E T+Y+V ++ IV EF+ + ++ +++ E+ +
Sbjct: 321 TQLDGASVSDLLIPANTSENTLYNVNLIIAIVEEFVSRQSDTGKMKFQDDDEIVEVENLT 380
Query: 360 ILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKE 419
+S S L VA LIDGYLAEIAKD NLPL F+ +AE+V SR +HDGLYRAID YLKE
Sbjct: 381 PVSSTSNLAVANLIDGYLAEIAKDTNLPLSKFIAIAEMVPPASRKNHDGLYRAIDMYLKE 440
Query: 420 HPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSG--TS 477
HP +SK EKK++C+LMDC+KLS DA LHAVQNERLP RV+VQVL FEQ+R +A+SG +
Sbjct: 441 HPSLSKSEKKALCRLMDCKKLSQDACLHAVQNERLPLRVVVQVLFFEQIRASAASGRTDA 500
Query: 478 TPDIAKGIKDL----SIGSNGSSRS-GTTNPEYDTDGAGTAEELKALRKELASLRQSNGV 532
++ + L + S GSSRS TT E D G T+ ++ + +SLR +N
Sbjct: 501 AAELTSAVHSLLPRENGNSYGSSRSAATTTTEEDGTGVPTSSDINS----FSSLRLANNS 556
Query: 533 GNSFKDGDA----KPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSV 588
G S + + + D K KG L KK KLW+ K ENS SD+SES GS+
Sbjct: 557 GGSERSSGSSDINNKSCDDKSSSKSKGSLMPKKILSKLWSGKTNASENSSSDTSESPGSL 616
Query: 589 NPEEVKSTPSRNRRNSVS 606
NPEEVKST SRN R V+
Sbjct: 617 NPEEVKSTTSRNTRRLVT 634
>gb|AAM91121.1| photoreceptor-interacting protein-like [Arabidopsis thaliana]
gi|15451228|gb|AAK96885.1| photoreceptor-interacting
protein-like [Arabidopsis thaliana]
Length = 579
Score = 524 bits (1350), Expect = e-147
Identities = 303/615 (49%), Positives = 403/615 (65%), Gaps = 67/615 (10%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISL---NNEENINEIQISDIPGG 59
RYVA+ELA+D++V +GD KF+LHKFPL+SKS+ LQKLI+ + + + +EI+I DIPGG
Sbjct: 21 RYVATELATDVVVIVGDVKFHLHKFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGG 80
Query: 60 ASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSW 119
AFEICAKFCYGM VTLNAYNV+A RCAAEYL M+E+IE GNL++K++VFL+SS+ RSW
Sbjct: 81 PPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSW 140
Query: 120 KDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKL--PEENGF 177
KDSII+LQTT+S P E+ K+ RC+ESIA KA +D ++VDWSYTYNR+KL PE N
Sbjct: 141 KDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPARVDWSYTYNRRKLLPPEMN-- 198
Query: 178 ESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLP 237
+VP+DWWVEDL EL +D++K V++ I+ K +VIGEAL+ YA +++P
Sbjct: 199 --------NNSVPRDWWVEDLAELSIDLFKRVVSTIRRKGGVLPEVIGEALEVYAAKRIP 250
Query: 238 NF---SKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDV 294
F + EDV + R ++ET+V +LPS+K SVSC FL+KLLK+ + E + R
Sbjct: 251 GFMIQNDNNDDEEDVMEQRSLLETLVSMLPSEKQSVSCGFLIKLLKSSVSFECGEEERKE 310
Query: 295 LVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEG 354
L +RIG++LEEA+V D+LI+AP+G T+YD+ IV+ ++ EF+ + + EL +
Sbjct: 311 LSRRIGEKLEEANVGDLLIRAPEGGETVYDIDIVETLIDEFVTQTEKRD-ELDCSDD--- 366
Query: 355 IRKPGILSDASKLMVAKLIDGYLAEIAK-DPNLPLLNFVNLAELVSRISRPSHDGLYRAI 413
++D+SK VAKLIDGYLAEI++ + NL F+ +AE VS R SHDG+YRAI
Sbjct: 367 ------INDSSKANVAKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAI 420
Query: 414 DTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAAS 473
D +LK+HPGI+K EKKS +LMDCRKLS +A HAVQNERLP RV+VQ+L FEQVR
Sbjct: 421 DMFLKQHPGITKSEKKSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVR---- 476
Query: 474 SGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVG 533
T+ P + GS+GSSR TT E T E R + +S ++
Sbjct: 477 -ATTKPSLPPS------GSHGSSR--TTTEEECESVTATEETTTTTRDKTSSSEKT---- 523
Query: 534 NSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWA--SKGGHGENSGSDSSESIGSVNPE 591
K KG++ S + F KLW K G G+ S SD+SES GSV
Sbjct: 524 ------------------KAKGVVMS-RIFSKLWTGKDKDGVGDVSSSDTSESPGSVTTV 564
Query: 592 EVKSTPSRNRRNSVS 606
KSTPS RR S S
Sbjct: 565 GDKSTPSTRRRRSSS 579
>dbj|BAB09029.1| photoreceptor-interacting protein-like [Arabidopsis thaliana]
gi|15240741|ref|NP_201545.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
Length = 579
Score = 524 bits (1349), Expect = e-147
Identities = 303/615 (49%), Positives = 403/615 (65%), Gaps = 67/615 (10%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISL---NNEENINEIQISDIPGG 59
RYVA+ELA+D++V +GD KF+LHKFPL+SKS+ LQKLI+ + + + +EI+I DIPGG
Sbjct: 21 RYVATELATDVVVIVGDVKFHLHKFPLLSKSARLQKLIATTTTDEQSDDDEIRIPDIPGG 80
Query: 60 ASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSW 119
AFEICAKFCYGM VTLNAYNV+A RCAAEYL M+E+IE GNL++K++VFL+SS+ RSW
Sbjct: 81 PPAFEICAKFCYGMAVTLNAYNVVAVRCAAEYLEMYESIENGNLVYKMEVFLNSSVLRSW 140
Query: 120 KDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKL--PEENGF 177
KDSII+LQTT+S P E+ K+ RC+ESIA KA +D ++VDWSYTYNR+KL PE N
Sbjct: 141 KDSIIVLQTTRSFYPWSEDVKLDVRCLESIALKAAMDPARVDWSYTYNRRKLLPPEMN-- 198
Query: 178 ESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLP 237
+VP+DWWVEDL EL +D++K V++ I+ K +VIGEAL+ YA +++P
Sbjct: 199 --------NNSVPRDWWVEDLAELSIDLFKRVVSTIRRKGGVLPEVIGEALEVYAAKRIP 250
Query: 238 NF---SKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDV 294
F + EDV + R ++ET+V +LPS+K SVSC FL+KLLK+ + E + R
Sbjct: 251 GFMIQNDDNDDEEDVMEQRSLLETLVSMLPSEKQSVSCGFLIKLLKSSVSFECGEEERKE 310
Query: 295 LVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEG 354
L +RIG++LEEA+V D+LI+AP+G T+YD+ IV+ ++ EF+ + + EL +
Sbjct: 311 LSRRIGEKLEEANVGDLLIRAPEGGETVYDIDIVETLIDEFVTQTEKRD-ELDCSDD--- 366
Query: 355 IRKPGILSDASKLMVAKLIDGYLAEIAK-DPNLPLLNFVNLAELVSRISRPSHDGLYRAI 413
++D+SK VAKLIDGYLAEI++ + NL F+ +AE VS R SHDG+YRAI
Sbjct: 367 ------INDSSKANVAKLIDGYLAEISRIETNLSTTKFITIAEKVSTFPRQSHDGVYRAI 420
Query: 414 DTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAAS 473
D +LK+HPGI+K EKKS +LMDCRKLS +A HAVQNERLP RV+VQ+L FEQVR
Sbjct: 421 DMFLKQHPGITKSEKKSSSKLMDCRKLSPEACAHAVQNERLPLRVVVQILFFEQVR---- 476
Query: 474 SGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVG 533
T+ P + GS+GSSR TT E T E R + +S ++
Sbjct: 477 -ATTKPSLPPS------GSHGSSR--TTTEEECESVTATEETTTTTRDKTSSSEKT---- 523
Query: 534 NSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWA--SKGGHGENSGSDSSESIGSVNPE 591
K KG++ S + F KLW K G G+ S SD+SES GSV
Sbjct: 524 ------------------KAKGVVMS-RIFSKLWTGKDKDGVGDVSSSDTSESPGSVTTV 564
Query: 592 EVKSTPSRNRRNSVS 606
KSTPS RR S S
Sbjct: 565 GDKSTPSTRRRRSSS 579
>emb|CAB80424.1| putative protein [Arabidopsis thaliana] gi|4468984|emb|CAB38298.1|
putative protein [Arabidopsis thaliana]
gi|7459615|pir||T04716 hypothetical protein F19F18.80 -
Arabidopsis thaliana
Length = 586
Score = 521 bits (1343), Expect = e-146
Identities = 300/619 (48%), Positives = 411/619 (65%), Gaps = 77/619 (12%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI----SLNNEENI-------NEI 51
RYV+SELA+D+IV IGD KFYLHKFPL+SKS+ LQKLI S +NEEN +EI
Sbjct: 27 RYVSSELATDVIVIIGDVKFYLHKFPLLSKSARLQKLITTSTSSSNEENQIHHHHHEDEI 86
Query: 52 QISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFL 111
+I++IPGG ++FEICAKFCYGMTVTLNAYNV+A RCAAE+L M+E +EKGNL++KI+VFL
Sbjct: 87 EIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMYETVEKGNLVYKIEVFL 146
Query: 112 SSSIFRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKL 171
+SSI +SWKDSII+LQTT+++SP EE K+ RC++SIA++A +D SKV+WSYTY++KK
Sbjct: 147 NSSILQSWKDSIIVLQTTRALSPYSEELKLTGRCLDSIASRASIDTSKVEWSYTYSKKK- 205
Query: 172 PEENGFESNQNGVR-TRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKA 230
+ NG+R + VP+DWWVEDLC+L +D+YK + I+ + S DVIGEAL A
Sbjct: 206 -------NLDNGLRKPQAVPRDWWVEDLCDLHIDLYKRALATIEARGNVSADVIGEALHA 258
Query: 231 YAYRKLPNFSK-GMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESED 289
YA +++P FSK + D +K+R + ++I++L+P +K SVS FL KLL+A IF+ ++
Sbjct: 259 YAIKRIPGFSKSSSVQVTDFAKYRALADSIIELIPDEKRSVSSSFLTKLLRASIFLGCDE 318
Query: 290 RIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGG 349
L R+G++L+EA++ D+L +YDV ++Q +V FL
Sbjct: 319 VAG--LKNRVGERLDEANLGDVL---------LYDVELMQSLVEVFLKS----------- 356
Query: 350 GELEGIRKPGILSDASKLMVAKLIDGYLAEIAKD-PNLPLLNFVNLAELVSRISRPSHDG 408
R P +K VAKL+DGYLAE ++D NLPL F++LAE+VS R SHDG
Sbjct: 357 ------RDPREDDVTAKASVAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQSHDG 410
Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQV 468
+YRAID +LKEHP ++K EKK IC+LMDCRKLS +A HAVQNERLP RV+VQVL FEQV
Sbjct: 411 VYRAIDMFLKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQV 470
Query: 469 RT----AASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELA 524
R ++S+G STP++ +SRS T + DT+ T E++KALR ELA
Sbjct: 471 RANNNGSSSTGNSTPEVIP-----------ASRSTNTTDQEDTECWDT-EDIKALRGELA 518
Query: 525 SLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSES 584
+LR + K+ N K + G G L + F KLW+ K G+ S + S
Sbjct: 519 NLRLA-------KNQQESHNQGKLMKG---GGLGVSRVFSKLWSGKERSGDMISSSGTSS 568
Query: 585 IGSVNPEEVKSTPSRNRRN 603
GSVN ++ KS+ S ++++
Sbjct: 569 PGSVN-DDSKSSSSTSKKH 586
>ref|NP_568030.1| phototropic-responsive NPH3 family protein [Arabidopsis thaliana]
Length = 580
Score = 521 bits (1343), Expect = e-146
Identities = 300/619 (48%), Positives = 411/619 (65%), Gaps = 77/619 (12%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI----SLNNEENI-------NEI 51
RYV+SELA+D+IV IGD KFYLHKFPL+SKS+ LQKLI S +NEEN +EI
Sbjct: 21 RYVSSELATDVIVIIGDVKFYLHKFPLLSKSARLQKLITTSTSSSNEENQIHHHHHEDEI 80
Query: 52 QISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFL 111
+I++IPGG ++FEICAKFCYGMTVTLNAYNV+A RCAAE+L M+E +EKGNL++KI+VFL
Sbjct: 81 EIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMYETVEKGNLVYKIEVFL 140
Query: 112 SSSIFRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKL 171
+SSI +SWKDSII+LQTT+++SP EE K+ RC++SIA++A +D SKV+WSYTY++KK
Sbjct: 141 NSSILQSWKDSIIVLQTTRALSPYSEELKLTGRCLDSIASRASIDTSKVEWSYTYSKKK- 199
Query: 172 PEENGFESNQNGVR-TRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKA 230
+ NG+R + VP+DWWVEDLC+L +D+YK + I+ + S DVIGEAL A
Sbjct: 200 -------NLDNGLRKPQAVPRDWWVEDLCDLHIDLYKRALATIEARGNVSADVIGEALHA 252
Query: 231 YAYRKLPNFSK-GMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESED 289
YA +++P FSK + D +K+R + ++I++L+P +K SVS FL KLL+A IF+ ++
Sbjct: 253 YAIKRIPGFSKSSSVQVTDFAKYRALADSIIELIPDEKRSVSSSFLTKLLRASIFLGCDE 312
Query: 290 RIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGG 349
L R+G++L+EA++ D+L +YDV ++Q +V FL
Sbjct: 313 VAG--LKNRVGERLDEANLGDVL---------LYDVELMQSLVEVFLKS----------- 350
Query: 350 GELEGIRKPGILSDASKLMVAKLIDGYLAEIAKD-PNLPLLNFVNLAELVSRISRPSHDG 408
R P +K VAKL+DGYLAE ++D NLPL F++LAE+VS R SHDG
Sbjct: 351 ------RDPREDDVTAKASVAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQSHDG 404
Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQV 468
+YRAID +LKEHP ++K EKK IC+LMDCRKLS +A HAVQNERLP RV+VQVL FEQV
Sbjct: 405 VYRAIDMFLKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQV 464
Query: 469 RT----AASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELA 524
R ++S+G STP++ +SRS T + DT+ T E++KALR ELA
Sbjct: 465 RANNNGSSSTGNSTPEVIP-----------ASRSTNTTDQEDTECWDT-EDIKALRGELA 512
Query: 525 SLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSES 584
+LR + K+ N K + G G L + F KLW+ K G+ S + S
Sbjct: 513 NLRLA-------KNQQESHNQGKLMKG---GGLGVSRVFSKLWSGKERSGDMISSSGTSS 562
Query: 585 IGSVNPEEVKSTPSRNRRN 603
GSVN ++ KS+ S ++++
Sbjct: 563 PGSVN-DDSKSSSSTSKKH 580
>gb|AAM10059.1| putative protein [Arabidopsis thaliana] gi|15451176|gb|AAK96859.1|
putative protein [Arabidopsis thaliana]
Length = 580
Score = 520 bits (1340), Expect = e-146
Identities = 299/619 (48%), Positives = 411/619 (66%), Gaps = 77/619 (12%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI----SLNNEENI-------NEI 51
RYV+S+LA+D+IV IGD KFYLHKFPL+SKS+ LQKLI S +NEEN +EI
Sbjct: 21 RYVSSDLATDVIVIIGDVKFYLHKFPLLSKSARLQKLITTSTSSSNEENQIHHHHHEDEI 80
Query: 52 QISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFL 111
+I++IPGG ++FEICAKFCYGMTVTLNAYNV+A RCAAE+L M+E +EKGNL++KI+VFL
Sbjct: 81 EIAEIPGGPASFEICAKFCYGMTVTLNAYNVVAARCAAEFLEMYETVEKGNLVYKIEVFL 140
Query: 112 SSSIFRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKL 171
+SSI +SWKDSII+LQTT+++SP EE K+ RC++SIA++A +D SKV+WSYTY++KK
Sbjct: 141 NSSILQSWKDSIIVLQTTRALSPYSEELKLTGRCLDSIASRASIDTSKVEWSYTYSKKK- 199
Query: 172 PEENGFESNQNGVR-TRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKA 230
+ NG+R + VP+DWWVEDLC+L +D+YK + I+ + S DVIGEAL A
Sbjct: 200 -------NLDNGLRKPQAVPRDWWVEDLCDLHIDLYKRALATIEARGNVSADVIGEALHA 252
Query: 231 YAYRKLPNFSK-GMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESED 289
YA +++P FSK + D +K+R + ++I++L+P +K SVS FL KLL+A IF+ ++
Sbjct: 253 YAIKRIPGFSKSSSVQVTDFAKYRALADSIIELIPDEKRSVSSSFLTKLLRASIFLGCDE 312
Query: 290 RIRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGG 349
L R+G++L+EA++ D+L +YDV ++Q +V FL
Sbjct: 313 VAG--LKNRVGERLDEANLGDVL---------LYDVELMQSLVEVFLKS----------- 350
Query: 350 GELEGIRKPGILSDASKLMVAKLIDGYLAEIAKD-PNLPLLNFVNLAELVSRISRPSHDG 408
R P +K VAKL+DGYLAE ++D NLPL F++LAE+VS R SHDG
Sbjct: 351 ------RDPREDDVTAKASVAKLVDGYLAEKSRDSDNLPLQKFLSLAEMVSSFPRQSHDG 404
Query: 409 LYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQV 468
+YRAID +LKEHP ++K EKK IC+LMDCRKLS +A HAVQNERLP RV+VQVL FEQV
Sbjct: 405 VYRAIDMFLKEHPEMNKSEKKRICRLMDCRKLSAEACAHAVQNERLPMRVVVQVLFFEQV 464
Query: 469 RT----AASSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELA 524
R ++S+G STP++ +SRS T + DT+ T E++KALR ELA
Sbjct: 465 RANNNGSSSTGNSTPEVIP-----------ASRSTNTTDQEDTECWDT-EDIKALRGELA 512
Query: 525 SLRQSNGVGNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSES 584
+LR + K+ N K + G G L + F KLW+ K G+ S + S
Sbjct: 513 NLRLA-------KNQQESHNQGKLMKG---GGLGVSRVFSKLWSGKERSGDMISSSGTSS 562
Query: 585 IGSVNPEEVKSTPSRNRRN 603
GSVN ++ KS+ S ++++
Sbjct: 563 PGSVN-DDSKSSSSTSKKH 580
>dbj|BAD33627.1| putative RPT2 [Oryza sativa (japonica cultivar-group)]
gi|50725972|dbj|BAD33499.1| putative RPT2 [Oryza sativa
(japonica cultivar-group)]
Length = 618
Score = 498 bits (1281), Expect = e-139
Identities = 286/616 (46%), Positives = 384/616 (61%), Gaps = 30/616 (4%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
RYV S+LA+D+IV + + KFYLHKFPL+SKSS LQ+L+ EE +E+ I PGG +A
Sbjct: 21 RYVISDLATDVIVHVSEVKFYLHKFPLLSKSSKLQRLVIKATEEGTDEVHIDGFPGGVTA 80
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FEICAKFCYGM VTL+ +NV+A RCAAEYL M E+++KGNL+FKIDVF++SSI RSWKDS
Sbjct: 81 FEICAKFCYGMVVTLSPHNVVAARCAAEYLEMTEDVDKGNLIFKIDVFINSSILRSWKDS 140
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II+LQ+TK++ P EE KV+ RCI++IA+K VD + V WSY+++RK + ES
Sbjct: 141 IIVLQSTKALLPWSEELKVIGRCIDAIASKTSVDPANVTWSYSHSRKGMSCTEIVESTG- 199
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
RT PKDWWVEDLCEL+VD+YK V+ +K+K S ++IGEALKAYA R LP+
Sbjct: 200 --RTSIAPKDWWVEDLCELDVDLYKRVMVAVKSKGRMSPELIGEALKAYAVRWLPDSYDA 257
Query: 243 MIPCEDVSKHRLIVETIVKLLPSDKGS-VSCRFLVKLLKAVIFVESEDRIRDVLVKRIGQ 301
++ + + +++ +VETI+ LLPSDK S SCRFL+KLLK I V + +++ L++RI
Sbjct: 258 LVAEDYMRRNQCLVETIIWLLPSDKTSGCSCRFLLKLLKVAILVGAGQHVKEELMRRISF 317
Query: 302 QLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPGI- 360
QL +ASV D+L+ A +DV +V +V+ F+ + S GG +E I
Sbjct: 318 QLHKASVKDLLLPAASPSDGAHDVKLVHNLVQRFVARTAMSH----NGGFVEKSDDKMIE 373
Query: 361 --LSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLK 418
S L + +L+DGYL+E+A DP+L L FV LA V +RP HD LY A+D YLK
Sbjct: 374 LNFEQESTLALGELVDGYLSEVASDPDLSLSTFVELATAVPEAARPVHDSLYSAVDAYLK 433
Query: 419 EHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTST 478
EHP ISK +KK IC L+D +KLS DAS+HA QN+RLP R++VQVL F+Q+R +S+ +
Sbjct: 434 EHPNISKADKKKICGLIDVKKLSTDASMHATQNDRLPLRLVVQVLFFQQLRAGSSNALAL 493
Query: 479 PDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKD 538
D I + S P + A L A E G NSFKD
Sbjct: 494 TDGGGHTCAKPIMKDQSDICERRIPRHPNSLNKQATSLSAREVEHRKSEHRGGGRNSFKD 553
Query: 539 GDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKG----GHG-ENSGSDSSESIGSVNPEEV 593
+G +S++ F K+W+SKG G G E SGS S + S P +V
Sbjct: 554 ----------QLGGFLLQSRSRRIFDKIWSSKGQGENGKGSETSGSSQSPPL-SAKPADV 602
Query: 594 KST---PSRNRRNSVS 606
K + P RNRR SVS
Sbjct: 603 KPSPLPPLRNRRYSVS 618
>gb|AAM76746.1| hypothetical protein [Arabidopsis thaliana]
gi|61742600|gb|AAX55121.1| hypothetical protein
At2g23050 [Arabidopsis thaliana]
gi|26450059|dbj|BAC42149.1| unknown protein [Arabidopsis
thaliana] gi|28973417|gb|AAO64033.1| unknown protein
[Arabidopsis thaliana] gi|3169178|gb|AAC17821.1|
hypothetical protein [Arabidopsis thaliana]
gi|15227776|ref|NP_179887.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
gi|25336230|pir||H84619 hypothetical protein At2g23050
[imported] - Arabidopsis thaliana
Length = 481
Score = 489 bits (1259), Expect = e-136
Identities = 267/485 (55%), Positives = 341/485 (70%), Gaps = 48/485 (9%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI--SLNNEEN---INEIQISDIP 57
RYV +EL ++II+ IG+ KFYLHKFPL+SKS LQK I S N EE I+EI IS+IP
Sbjct: 21 RYVTNELETEIIIIIGNVKFYLHKFPLLSKSGFLQKHIATSKNEEEKKNQIDEIDISEIP 80
Query: 58 GGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFR 117
GG+ AFEIC KFCYG+TVTLNAYNV+A RCAAE+L M+E EK NL++KIDVFL+S+IFR
Sbjct: 81 GGSVAFEICVKFCYGITVTLNAYNVVAVRCAAEFLEMNETFEKSNLVYKIDVFLNSTIFR 140
Query: 118 SWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGF 177
SWKDSII+LQTTK + D+ +++V RC+ SIA+ A +D SKV WSYTYNRKK E+
Sbjct: 141 SWKDSIIVLQTTKDLLS-DDSEELVKRCLGSIASTASIDTSKVKWSYTYNRKKKLEK--V 197
Query: 178 ESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLP 237
++GV PKDWWVEDLCEL +D+YK I IK + ++VIGEAL AYA R++
Sbjct: 198 RKPEDGV-----PKDWWVEDLCELHIDLYKQAIKAIKNRGKVPSNVIGEALHAYAIRRIA 252
Query: 238 NFSKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVLVK 297
FSK + D R ++ TI++LLP +KG++S FL KL +A IF+ E+ +++ L K
Sbjct: 253 GFSKESMQLID----RSLINTIIELLPDEKGNISSSFLTKLHRASIFLGCEETVKEKLKK 308
Query: 298 RIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRK 357
R+ +QLEE +VNDIL MYD+ +VQ +V+EF+ +D +
Sbjct: 309 RVSEQLEETTVNDIL---------MYDLDMVQSLVKEFMNRDPKTH-------------- 345
Query: 358 PGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYL 417
SK+ VAKLIDGYLAE ++DPNLPL NF++LAE +S R SHD LYRAID +L
Sbjct: 346 -------SKVSVAKLIDGYLAEKSRDPNLPLQNFLSLAETLSSFPRHSHDVLYRAIDMFL 398
Query: 418 KEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVR-TAASSGT 476
KEH GISK EKK +C LMDCRKLS +A HAVQNERLP RVIVQVL FEQ+R +S+G
Sbjct: 399 KEHSGISKSEKKRVCGLMDCRKLSAEACEHAVQNERLPMRVIVQVLFFEQIRANGSSTGY 458
Query: 477 STPDI 481
STP++
Sbjct: 459 STPEL 463
>dbj|BAD72520.1| non-phototropic hypocotyl 3-like [Oryza sativa (japonica
cultivar-group)]
Length = 644
Score = 471 bits (1211), Expect = e-131
Identities = 286/635 (45%), Positives = 393/635 (61%), Gaps = 43/635 (6%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
RYV SEL SDI++ + + +FYLHKFPL+SKSS LQ+LI ++ +E+ I DIPGG
Sbjct: 22 RYVLSELPSDIVIHVEEARFYLHKFPLLSKSSLLQRLIIEASQNGTDEVYIHDIPGGVKI 81
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FEICAKFCYGM VTLNAYNV+A RCAAE LGM E+++K NL+FKI+VFL+S IFRSWKDS
Sbjct: 82 FEICAKFCYGMVVTLNAYNVVAARCAAELLGMTEDVDKSNLVFKIEVFLNSGIFRSWKDS 141
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II LQTT ++ P E+ K+ RCI+SIA+KA + V WSYTYNRK + E+ +N
Sbjct: 142 IIALQTTDALLPWSEQLKLAARCIDSIASKATSNPCNVVWSYTYNRKSASSDEIVEARKN 201
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPN-FSK 241
++ VPKDWWVEDLCEL+VD+YK V+ +K++ ++DV+GEALKAYA R LP F
Sbjct: 202 ---SQPVPKDWWVEDLCELDVDLYKRVMVAVKSRGRITSDVVGEALKAYASRWLPECFDT 258
Query: 242 GMIPCEDVS-KHRLIVETIVKLLPSDKGS--VSCRFLVKLLKAVIFVESEDRIRDVLVKR 298
I + S + ++ETIV LLPSDKGS SCRF +KLLK + + S + +++ L+ R
Sbjct: 259 AAIDDDAYSMAYNHLLETIVWLLPSDKGSSCCSCRFFLKLLKVAVLIGSGEMLKEELMDR 318
Query: 299 IGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKP 358
+ QL +ASV D+LI A +T YD+ +V +V F+ + +E + + L+
Sbjct: 319 VILQLHKASVCDLLIPARPPALTTYDIQLVLTLVGRFMRRAGVTE-DGIFLNNLDQEMFE 377
Query: 359 GILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLK 418
+ D S L ++K++DGYLAE+A DPNL + +FV +A + +R +HDGLY AID +LK
Sbjct: 378 TDVDDESLLALSKIVDGYLAEVASDPNLSVSSFVAVATSMPDAARATHDGLYTAIDVFLK 437
Query: 419 EHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTST 478
HP + K EK+ I LMD +KLS +A +HA QN+RLP RV+VQVL FEQ+R AA G +
Sbjct: 438 LHPNLPKAEKRKISSLMDVKKLSKEACIHAAQNDRLPLRVVVQVLFFEQLRAAA--GGNN 495
Query: 479 PDIAKGIKDLSIGSNGSSRSGTTNPEYDTD---GAGTAEELKA----------LRKELAS 525
P A + S G +R + D D G G + K+ L+K+L S
Sbjct: 496 PAAA-----AAAASGGIARLLVEEEDDDDDDVGGGGGGDWSKSRALPTPTPSLLKKQLGS 550
Query: 526 LRQSNGVGNSFKDGD-----AKPNMDKAVIGKMKGLLKSKKSFIKLWAS---KGGHGENS 577
L+ + G+ GD A+ + ++ +S++ F +LWA GG +
Sbjct: 551 LKLA-AAGDEGGGGDDGRQLARVSSVANQSSRLSLSSRSRRMFDRLWAGGKPPGGEVVSK 609
Query: 578 GSDSSESI----GSVNPEEVK--STPSRNRRNSVS 606
SD+S S S P K S+ SRNRR SVS
Sbjct: 610 SSDTSGSSQSPRSSAKPPASKSSSSSSRNRRYSVS 644
>gb|AAM13843.1| unknown protein [Arabidopsis thaliana]
Length = 571
Score = 440 bits (1132), Expect = e-122
Identities = 253/607 (41%), Positives = 360/607 (58%), Gaps = 59/607 (9%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
+Y S+L SD+ + +G+ F+LHKFPL+SKS+ +Q+L+ +EE +EI I D+PGG A
Sbjct: 21 KYAVSDLDSDVTIHVGEVTFHLHKFPLLSKSNRMQRLVFEASEEKTDEITILDMPGGYKA 80
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FEICAKFCYGMTVTLNAYN+ A RCAAEYL M E+ ++GNL++KI+VFL+S IFRSWKDS
Sbjct: 81 FEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRGNLIYKIEVFLNSGIFRSWKDS 140
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II+LQTT+S+ P E+ K+V RCI+S++ K V+ + WSYT+NRK + E ++
Sbjct: 141 IIVLQTTRSLLPWSEDLKLVGRCIDSVSAKILVNPETITWSYTFNRKLSGPDKIVEYHRE 200
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
+PKDWWVED+CELE+DM+K VI+ +K+ +N VI EAL+ Y R LP +
Sbjct: 201 KREENVIPKDWWVEDVCELEIDMFKGVISVVKSSGRMNNGVIAEALRYYVARWLPESMES 260
Query: 243 MIPCEDVSKHRLIVETIVKLLPSDKGSV---SCRFLVKLLKAVIFVESEDRIRDVLVKRI 299
+ + S ++ +VET+V LLP ++ SC FL+KLLK I V +++ +R+ LV+ +
Sbjct: 261 L--TSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLLKVSILVGADETVREDLVENV 318
Query: 300 GQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPG 359
+L EASV D+LI ++V +V +IV +F M D E + K
Sbjct: 319 SLKLHEASVKDLLI---------HEVELVHRIVDQF-MADEKRVSE-------DDRYKEF 361
Query: 360 ILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKE 419
+L + L V +LID YL A + L L +FV L+ELV +RP HDGLY+AIDT++KE
Sbjct: 362 VLGNGILLSVGRLIDAYL---ALNSELTLSSFVELSELVPESARPIHDGLYKAIDTFMKE 418
Query: 420 HPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTP 479
HP ++K EKK +C LMD RKL+ +AS HA QNERLP RV+VQVL+FEQ+R S
Sbjct: 419 HPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRANHS------ 472
Query: 480 DIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDG 539
+ S +S + G ++++ +K S +G G
Sbjct: 473 ---------PVASVAASSHSPVEKTEENKGEEATKKVELSKKSRGSKSTRSGGGAQLMPS 523
Query: 540 DAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSR 599
+S++ F K+W K G N S+ S P + S+ SR
Sbjct: 524 ------------------RSRRIFEKIWPGK-GEISNKSSEVSSGSSQSPPAKSSSSSSR 564
Query: 600 NRRNSVS 606
RR+S+S
Sbjct: 565 RRRHSIS 571
>gb|AAN13030.1| unknown protein [Arabidopsis thaliana] gi|22329064|ref|NP_194910.2|
phototropic-responsive NPH3 family protein [Arabidopsis
thaliana]
Length = 571
Score = 440 bits (1131), Expect = e-122
Identities = 253/607 (41%), Positives = 360/607 (58%), Gaps = 59/607 (9%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
+Y S+L SD+ + +G+ F+LHKFPL+SKS+ +Q+L+ +EE +EI I D+PGG A
Sbjct: 21 KYAVSDLDSDVTIHVGEVTFHLHKFPLLSKSNRMQRLVFEASEEKTDEITILDMPGGYKA 80
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FEICAKFCYGMTVTLNAYN+ A RCAAEYL M E+ ++GNL++KI+VFL+S IFRSWKDS
Sbjct: 81 FEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRGNLIYKIEVFLNSGIFRSWKDS 140
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
II+LQTT+S+ P E+ K+V RCI+S++ K V+ + WSYT+NRK + E ++
Sbjct: 141 IIVLQTTRSLLPWSEDLKLVGRCIDSVSAKILVNPETITWSYTFNRKLSGPDKIVEYHRE 200
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
+PKDWWVED+CELE+DM+K VI+ +K+ +N VI EAL+ Y R LP +
Sbjct: 201 KREENVIPKDWWVEDVCELEIDMFKRVISVVKSSGRMNNGVIAEALRYYVARWLPESMES 260
Query: 243 MIPCEDVSKHRLIVETIVKLLPSDKGSV---SCRFLVKLLKAVIFVESEDRIRDVLVKRI 299
+ + S ++ +VET+V LLP ++ SC FL+KLLK I V +++ +R+ LV+ +
Sbjct: 261 L--TSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLLKVSILVGADETVREDLVENV 318
Query: 300 GQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGELEGIRKPG 359
+L EASV D+LI ++V +V +IV +F M D E + K
Sbjct: 319 SLKLHEASVKDLLI---------HEVELVHRIVDQF-MADEKRVSE-------DDRYKEF 361
Query: 360 ILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRAIDTYLKE 419
+L + L V +LID YL A + L L +FV L+ELV +RP HDGLY+AIDT++KE
Sbjct: 362 VLGNGILLSVGRLIDAYL---ALNSELTLSSFVELSELVPESARPIHDGLYKAIDTFMKE 418
Query: 420 HPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAASSGTSTP 479
HP ++K EKK +C LMD RKL+ +AS HA QNERLP RV+VQVL+FEQ+R S
Sbjct: 419 HPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRANHS------ 472
Query: 480 DIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDG 539
+ S +S + G ++++ +K S +G G
Sbjct: 473 ---------PVASVAASSHSPVEKTEENKGEEATKKVELSKKSRGSKSTRSGGGAQLMPS 523
Query: 540 DAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEEVKSTPSR 599
+S++ F K+W K G N S+ S P + S+ SR
Sbjct: 524 ------------------RSRRIFEKIWPGK-GEISNKSSEVSSGSSQSPPAKSSSSSSR 564
Query: 600 NRRNSVS 606
RR+S+S
Sbjct: 565 RRRHSIS 571
>gb|AAP68226.1| At1g67900 [Arabidopsis thaliana] gi|21539469|gb|AAM53287.1| unknown
protein [Arabidopsis thaliana]
gi|42572025|ref|NP_974103.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
gi|15220579|ref|NP_176957.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
gi|12324088|gb|AAG52016.1| unknown protein; 76653-74502
[Arabidopsis thaliana] gi|25336217|pir||G96701 unknown
protein, 76653-74502 [imported] - Arabidopsis thaliana
Length = 631
Score = 395 bits (1016), Expect = e-108
Identities = 236/612 (38%), Positives = 352/612 (56%), Gaps = 60/612 (9%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
R V+SE++SD + + +++ LHKFPL+SK LQ++ S + E + IQ+ + PGG A
Sbjct: 20 RCVSSEVSSDFTIEVSGSRYLLHKFPLLSKCLRLQRMCSESPE---SIIQLPEFPGGVEA 76
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FE+CAKFCYG+T+T++AYN++A RCAAEYL M E +EKGNL++K++VF +S I W+DS
Sbjct: 77 FELCAKFCYGITITISAYNIVAARCAAEYLQMSEEVEKGNLVYKLEVFFNSCILNGWRDS 136
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
I+ LQTTK+ E+ + +RCIE+IA+K SKV S++++R+ ++ SN+
Sbjct: 137 IVTLQTTKAFPLWSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRV--RDDDMSSNRA 194
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSKG 242
+R WW ED+ EL +D+Y + IK+ +IG+AL+ YA + LP +
Sbjct: 195 AASSRG----WWAEDIAELGIDLYWRTMIAIKSGGKVPASLIGDALRVYASKWLPTLQRN 250
Query: 243 M------------IPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDR 290
+ SKHRL++E+I+ LLP++KG+VSC FL+KLLKA + +
Sbjct: 251 RKVVKKKEDSDSDSDTDTSSKHRLLLESIISLLPAEKGAVSCSFLLKLLKAANILNASTS 310
Query: 291 IRDVLVKRIGQQLEEASVNDILIKAPDGEITM-YDVGIVQKIVREFLMKDHNSEIELVGG 349
+ L +R+ QLEEA+V+D+LI + + YDV IV I+ +F+++ S
Sbjct: 311 SKMELARRVALQLEEATVSDLLIPPMSYKSELLYDVDIVATILEQFMVQGQTSPPTSPLR 370
Query: 350 G-------------------ELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLN 390
G E + R+ S +SKL VAKL+DGYL +IA+D NLPL
Sbjct: 371 GKKGMMDRRRRSRSAENIDLEFQESRRSSSASHSSKLKVAKLVDGYLQQIARDVNLPLSK 430
Query: 391 FVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQ 450
FV LAE V SR HD LYRAID YLK H ++K E+K +C+++DC+KLS++A +HA Q
Sbjct: 431 FVTLAESVPEFSRLDHDDLYRAIDIYLKAHKNLNKSERKRVCRVLDCKKLSMEACMHAAQ 490
Query: 451 NERLPTRVIVQVLHFEQVRTAASSGT---STPDIAKGIKDLSIGSN------GSSRSGTT 501
NE LP RV+VQVL +EQ R AA++ +T ++ IK L N ++ TT
Sbjct: 491 NEMLPLRVVVQVLFYEQARAAAATNNGEKNTTELPSNIKALLAAHNIDPSNPNAAAFSTT 550
Query: 502 NPEYDTDGAGTAEELKALRKEL-----ASLRQSNGVGNSFKDGDA--KPNMDKAVIGKMK 554
+ + LK+ + +L + L + V F +GD P+ KA +
Sbjct: 551 TSIAAPEDRWSVSGLKSPKSKLSGTLRSKLAEDEEVDERFMNGDGGRTPSRFKAFCA-IP 609
Query: 555 GLLKSKKSFIKL 566
G + KK F KL
Sbjct: 610 G--RPKKMFSKL 619
>emb|CAB79900.1| putative protein [Arabidopsis thaliana] gi|4584521|emb|CAB40752.1|
putative protein [Arabidopsis thaliana]
gi|7485376|pir||T06304 hypothetical protein F11C18.20 -
Arabidopsis thaliana
Length = 498
Score = 388 bits (996), Expect = e-106
Identities = 229/554 (41%), Positives = 322/554 (57%), Gaps = 59/554 (10%)
Query: 56 IPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSI 115
+PGG AFEICAKFCYGMTVTLNAYN+ A RCAAEYL M E+ ++GNL++KI+VFL+S I
Sbjct: 1 MPGGYKAFEICAKFCYGMTVTLNAYNITAVRCAAEYLEMTEDADRGNLIYKIEVFLNSGI 60
Query: 116 FRSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEEN 175
FRSWKDSII+LQTT+S+ P E+ K+V RCI+S++ K V+ + WSYT+NRK +
Sbjct: 61 FRSWKDSIIVLQTTRSLLPWSEDLKLVGRCIDSVSAKILVNPETITWSYTFNRKLSGPDK 120
Query: 176 GFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRK 235
E ++ +PKDWWVED+CELE+DM+K VI+ +K+ +N VI EAL+ Y R
Sbjct: 121 IVEYHREKREENVIPKDWWVEDVCELEIDMFKRVISVVKSSGRMNNGVIAEALRYYVARW 180
Query: 236 LPNFSKGMIPCEDVSKHRLIVETIVKLLPSDKGSV---SCRFLVKLLKAVIFVESEDRIR 292
LP + + + S ++ +VET+V LLP ++ SC FL+KLLK I V +++ +R
Sbjct: 181 LPESMESL--TSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLLKVSILVGADETVR 238
Query: 293 DVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMKDHNSEIELVGGGEL 352
+ LV+ + +L EASV D+LI ++V +V +IV +F M D E
Sbjct: 239 EDLVENVSLKLHEASVKDLLI---------HEVELVHRIVDQF-MADEKRVSE------- 281
Query: 353 EGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYRA 412
+ K +L + L V +LID YL A + L L +FV L+ELV +RP HDGLY+A
Sbjct: 282 DDRYKEFVLGNGILLSVGRLIDAYL---ALNSELTLSSFVELSELVPESARPIHDGLYKA 338
Query: 413 IDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTAA 472
IDT++KEHP ++K EKK +C LMD RKL+ +AS HA QNERLP RV+VQVL+FEQ+R
Sbjct: 339 IDTFMKEHPELTKSEKKRLCGLMDVRKLTNEASTHAAQNERLPLRVVVQVLYFEQLRANH 398
Query: 473 SSGTSTPDIAKGIKDLSIGSNGSSRSGTTNPEYDTDGAGTAEELKALRKELASLRQSNGV 532
S + S +S + G ++++ +K S +G
Sbjct: 399 S---------------PVASVAASSHSPVEKTEENKGEEATKKVELSKKSRGSKSTRSGG 443
Query: 533 GNSFKDGDAKPNMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSVNPEE 592
G +S++ F K+W K G N S+ S P +
Sbjct: 444 GAQLMPS------------------RSRRIFEKIWPGK-GEISNKSSEVSSGSSQSPPAK 484
Query: 593 VKSTPSRNRRNSVS 606
S+ SR RR+S+S
Sbjct: 485 SSSSSSRRRRHSIS 498
>gb|AAL73542.1| putative photoreceptor-interacting protein [Sorghum bicolor]
Length = 658
Score = 353 bits (907), Expect = 7e-96
Identities = 203/496 (40%), Positives = 291/496 (57%), Gaps = 35/496 (7%)
Query: 4 YVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI--SLNNEENINEIQISDIPGGAS 61
Y S L SDI V +G+ F+LHKFPL+SKS L+K I ++ ++ I +SDIPGGA
Sbjct: 21 YCTSGLPSDITVVVGEQSFHLHKFPLLSKSGLLEKRIREKIDKGDDSCTIDLSDIPGGAK 80
Query: 62 AFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKD 121
AFE+ AKFCYG+ + A NV+ RCAA+YL M E I + NL+ + + FL+ ++ RSWKD
Sbjct: 81 AFELAAKFCYGVKFEMTASNVVHLRCAADYLEMTEEISEENLIAQTEYFLTQTVLRSWKD 140
Query: 122 SIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENG---FE 178
S+ LQT ++ + E ++V RC++SIA ++C D W + G +
Sbjct: 141 SVKALQTCDNVLEVAERLQIVKRCVDSIATRSCSDPDLFGWPVAQYGGPMQSPGGSLLWN 200
Query: 179 SNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPN 238
G R RN DWW +D+ L + +YK +I+ ++ + I ++G +L YA R+LP
Sbjct: 201 GISTGARPRNSSPDWWYDDVSCLSLPLYKKLISAMEYRGISQEIIVG-SLNHYAKRRLPG 259
Query: 239 FSKGM----------------IPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAV 282
++ IP ED K+ ++E I +LLP +G SC+ L LL+
Sbjct: 260 LNRRKSIGDVSNCLSMTSLTSIPSEDDQKY--LLEEIDRLLPFQRGVTSCKLLFGLLRTA 317
Query: 283 IFVESEDRIRDVLVKRIGQQLEEASVNDILI-KAPDGEITMYDVGIVQKIVREFLMKDHN 341
IF+++ L +RIG QL++AS+ D+LI D T+YDV Q+I+ FL D
Sbjct: 318 IFLKASPSCVSNLERRIGMQLDKASLEDLLIPNVSDSVETLYDVDCAQRILDHFLAMDQE 377
Query: 342 SEIELVGGGELEGIRKPGILSDASKLM----VAKLIDGYLAEIAKDPNLPLLNFVNLAEL 397
+ GG GI + G + + LM VAKLIDGYLAE+A D NL L F +LA
Sbjct: 378 T------GGASPGIGEDGQMLASPSLMPIMMVAKLIDGYLAEVAPDMNLKLPKFRSLAAA 431
Query: 398 VSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTR 457
+ +RP DGLYRAID YLK HP +S+ EK+ +C++MDC+KLS++A HA QNERLP R
Sbjct: 432 IPDYARPIDDGLYRAIDIYLKAHPHLSESEKEELCRVMDCQKLSLEACTHAAQNERLPLR 491
Query: 458 VIVQVLHFEQVRTAAS 473
+IVQVL FEQ++ +S
Sbjct: 492 IIVQVLFFEQLQLRSS 507
>ref|XP_479933.1| putative non-phototropic hypocotyl 3 (NPH3)/phototropic response
protein [Oryza sativa (japonica cultivar-group)]
gi|42408462|dbj|BAD09643.1| putative non-phototropic
hypocotyl 3 (NPH3)/phototropic response protein [Oryza
sativa (japonica cultivar-group)]
gi|50725834|dbj|BAD33364.1| putative non-phototropic
hypocotyl 3 (NPH3)/phototropic response protein [Oryza
sativa (japonica cultivar-group)]
Length = 641
Score = 351 bits (901), Expect = 3e-95
Identities = 204/501 (40%), Positives = 290/501 (57%), Gaps = 45/501 (8%)
Query: 4 YVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLI--SLNNEENINEIQISDIPGGAS 61
Y + L SDI V++G+ F+LHKFPL+SKS L++ I + N +N I +SDIPGGA
Sbjct: 21 YCTTGLPSDITVTVGEQSFHLHKFPLLSKSGLLERCIREKIENGDNSCVIDLSDIPGGAK 80
Query: 62 AFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKD 121
AFE+ AKFCYG+ + A NV+ RCAAEYL M E I +GNL+ + + FL+ ++ RSWKD
Sbjct: 81 AFELTAKFCYGVKFEMTASNVVHLRCAAEYLEMTEEIAEGNLIAQTENFLTQTVLRSWKD 140
Query: 122 SIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENG---FE 178
SI L T + L E+ ++V RCI+S+A ++C D W + G +
Sbjct: 141 SIKALHTCDDIIDLAEKLQIVKRCIDSVATRSCTDPDLFGWPVVQYGGPMQSPGGSVLWN 200
Query: 179 SNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPN 238
G R R+ DWW +D+ L + +YK VI+ ++ + I + ++G +L YA R+LP
Sbjct: 201 GISTGARPRHSSPDWWYDDVSCLSLPLYKKVISAMEYRGINQDIIVG-SLNHYAKRRLPG 259
Query: 239 FSKGM----------------IPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAV 282
++ IP E+ K+ ++E I +LLP +G SC+ L LL+
Sbjct: 260 LNRRKSISDVSSCLSISSLTSIPSEEEQKY--LLEEIDRLLPFQRGVTSCKLLFGLLRTA 317
Query: 283 IFVESEDRIRDVLVKRIGQQLEEASVNDILIKAPDGEI-TMYDVGIVQKIVREFLMKDHN 341
I +++ L +RIG QL++A++ D+LI + T+YDV V KI+ FL D
Sbjct: 318 IILKASPSCVSNLERRIGMQLDKATLEDLLIPNISESVETLYDVDCVHKILDHFLAMDQE 377
Query: 342 SEIELVGGGELEGIRKPGILSDASKL---------MVAKLIDGYLAEIAKDPNLPLLNFV 392
+ G PG+ DA L MVAKLIDGYLAE+A D NL L F
Sbjct: 378 T-----------GGASPGLGEDAQMLASPSLMPITMVAKLIDGYLAEVAPDVNLKLPKFR 426
Query: 393 NLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNE 452
+LA + +RP DGLYRAID YLK HP +S+ EK+ +C++MDC+KLS++A HA QNE
Sbjct: 427 SLAAAIPDYARPIDDGLYRAIDIYLKAHPHLSESEKEELCRVMDCQKLSLEACTHAAQNE 486
Query: 453 RLPTRVIVQVLHFEQVRTAAS 473
RLP RVIVQVL FEQ++ +S
Sbjct: 487 RLPLRVIVQVLFFEQLQLRSS 507
>dbj|BAB02210.1| unnamed protein product [Arabidopsis thaliana]
gi|15231566|ref|NP_189280.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
Length = 588
Score = 338 bits (867), Expect = 3e-91
Identities = 197/506 (38%), Positives = 294/506 (57%), Gaps = 47/506 (9%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINE---IQISDIPGG 59
R V+S+L +D+++ + TK+ LHKFP++SK L+ L+S E E IQ+ D PG
Sbjct: 20 RSVSSDLLNDLVIQVKSTKYLLHKFPMLSKCLRLKNLVSSQETETSQEQQVIQLVDFPGE 79
Query: 60 ASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKG---NLLFKIDVFLSSSIF 116
AFE+CAKFCYG+T+TL A+NV+A RCAAEYLGM E +E G NL+ ++++FL++ +F
Sbjct: 80 TEAFELCAKFCYGITITLCAHNVVAVRCAAEYLGMTEEVELGETENLVQRLELFLTTCVF 139
Query: 117 RSWKDSIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDV-----SKVDWSYTYNRKKL 171
+SW+DS + LQTTK + E+ + NRCIE+IAN V ++++ NR ++
Sbjct: 140 KSWRDSYVTLQTTKVLPLWSEDLGITNRCIEAIANGVTVSPGEDFSTQLETGLLRNRSRI 199
Query: 172 PEENGFESNQNGVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQ-SNDVIGEALKA 230
+ + G + ++ WW EDL EL +D+Y+ + IK+ + S +IG AL+
Sbjct: 200 RRDEILCNGGGGSKAESLR--WWGEDLAELGLDLYRRTMVAIKSSHRKISPRLIGNALRI 257
Query: 231 YAYRKLPNFSKGMIPCEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDR 290
YA + LP+ E + L++E+++ LLP +K SV C FL++LLK +
Sbjct: 258 YASKWLPSIQ------ESSADSNLVLESVISLLPEEKSSVPCSFLLQLLKMANVMNVSHS 311
Query: 291 IRDVLVKRIGQQLEEASVNDILIKAPDGEITMYDVGIVQKIVREFLMK------------ 338
+ L + G QL++A+V+++LI D +YDV +V+ +V++FL
Sbjct: 312 SKMELAIKAGNQLDKATVSELLIPLSDKSGMLYDVDVVKMMVKQFLSHISPEIRPTRTRT 371
Query: 339 DHN----------SEIELVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPL 388
+H EI+ V G P +LS VAKL+D YL EIA+D NL +
Sbjct: 372 EHRRSRSEENINLEEIQEVRGSLSTSSSPPPLLSK-----VAKLVDSYLQEIARDVNLTV 426
Query: 389 LNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHA 448
FV LAE + SR HD LY AID YL+ H I K E+K +C+++DC+KLSV+AS A
Sbjct: 427 SKFVELAETIPDTSRICHDDLYNAIDVYLQVHKKIEKCERKRLCRILDCKKLSVEASKKA 486
Query: 449 VQNERLPTRVIVQVLHFEQVRTAASS 474
QNE LP RVIVQ+L EQ R ++
Sbjct: 487 AQNELLPLRVIVQILFVEQARATLAT 512
>gb|AAP04068.1| putative photoreceptor-interacting protein [Arabidopsis thaliana]
gi|10177916|dbj|BAB11327.1| photoreceptor-interacting
protein-like [Arabidopsis thaliana]
gi|28973697|gb|AAO64165.1| putative
photoreceptor-interacting protein [Arabidopsis thaliana]
gi|15238817|ref|NP_199591.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
Length = 559
Score = 337 bits (864), Expect = 7e-91
Identities = 183/487 (37%), Positives = 292/487 (59%), Gaps = 34/487 (6%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
R + ++ +D+++ I +T ++LH+ L+ K L++L + E + I+++DIPGGA A
Sbjct: 20 RILITDTPNDLVIRINNTTYHLHRSCLVPKCGLLRRLCTDLEESDTVTIELNDIPGGADA 79
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FE+CAKFCY +T+ L+A+N++ CA+++L M ++++KGNLL K++ F S I + WKDS
Sbjct: 80 FELCAKFCYDITINLSAHNLVNALCASKFLRMSDSVDKGNLLPKLEAFFHSCILQGWKDS 139
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
I+ LQ+T + E +V +CI+SI K S+V WS+TY R G+ Q+
Sbjct: 140 IVTLQSTTKLPEWCENLGIVRKCIDSIVEKILTPTSEVSWSHTYTRP------GYAKRQH 193
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFS-- 240
+VP+DWW ED+ +L++D+++ VIT ++ +IGEAL Y R LP F
Sbjct: 194 ----HSVPRDWWTEDISDLDLDLFRCVITAARSTFTLPPQLIGEALHVYTCRWLPYFKSN 249
Query: 241 --KGMIPCED---VSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESEDRIRDVL 295
G E+ + +HR +V T+V ++P+DKGSVS FL++L+ +V + + L
Sbjct: 250 SHSGFSVKENEAALERHRRLVNTVVNMIPADKGSVSEGFLLRLVSIASYVRASLTTKTEL 309
Query: 296 VKRIGQQLEEASVNDILIKA-PDGEITMYDVGIVQKIVREFLM---KDHNSEIELVGGGE 351
+++ QLEEA++ D+L+ + + YD +V ++ FLM + ++ +
Sbjct: 310 IRKSSLQLEEATLEDLLLPSHSSSHLHRYDTDLVATVLESFLMLWRRQSSAHLSSNNTQL 369
Query: 352 LEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSHDGLYR 411
L IRK VAKLID YL +A+D ++P+ FV+L+E V I+R SHD LY+
Sbjct: 370 LHSIRK-----------VAKLIDSYLQAVAQDVHMPVSKFVSLSEAVPDIARQSHDRLYK 418
Query: 412 AIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFEQVRTA 471
AI+ +LK HP ISK EKK +C+ +DC+KLS HAV+NER+P R +VQ L F+Q +
Sbjct: 419 AINIFLKVHPEISKEEKKRLCRSLDCQKLSAQVRAHAVKNERMPLRTVVQALFFDQ--ES 476
Query: 472 ASSGTST 478
S G S+
Sbjct: 477 GSKGASS 483
>gb|AAT85278.1| NPH3 family protein [Oryza sativa (japonica cultivar-group)]
Length = 650
Score = 333 bits (853), Expect = 1e-89
Identities = 211/550 (38%), Positives = 315/550 (56%), Gaps = 34/550 (6%)
Query: 2 RRYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGAS 61
R++ + L SD+ V +GD F+LHKFPL+SKS+ L++LI ++++ I ++DIPGGA
Sbjct: 46 RKFCTTGLPSDVTVEVGDMSFHLHKFPLLSKSAFLERLIEETSDQDECVIILNDIPGGAK 105
Query: 62 AFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKD 121
+FE+ A+FCYG+ + L++ NV+ RCA+E+L M E I + NL+ + ++FL+ I R+WKD
Sbjct: 106 SFELVARFCYGVKIELSSENVVYLRCASEHLQMTEEIAEDNLISQSEIFLNQVIIRNWKD 165
Query: 122 SIILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQ 181
S+ L+T + + P E ++V RCIES+A+KA D + W + + G
Sbjct: 166 SLKALETCEDLLPHAENLQIVKRCIESLASKATTDPNLFGW--PIREHGIMQSPGGSVLW 223
Query: 182 NGV----RTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLP 237
NG+ R RN +WW ED L MYK +I+ ++++ I+ ++I +L YA + LP
Sbjct: 224 NGISTGARPRNFSSNWWYEDASALSFHMYKRLISTMESRGIRP-EIIAGSLTYYAKKYLP 282
Query: 238 NF----SKGMIP----CEDVSKHRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVESED 289
S G +P +V + L+ E I +LLP KG S R L+ LL+ + +++
Sbjct: 283 GLNRRHSMGAVPLTATLSEVEQKNLL-EEIDRLLPVQKGLASTRVLLGLLRTAMILKASP 341
Query: 290 RIRDVLVKRIGQQLEEASVNDILIKAPDGEITM---YDVGIVQKIVREFLMKDHNSEIEL 346
L KRIG QL+ A++ D+L+ P+ TM Y+V VQ+I+ FL D +
Sbjct: 342 TCISNLEKRIGMQLDHATLEDLLL--PNFSYTMETLYNVECVQRILDHFLAMD---QANG 396
Query: 347 VGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPNLPLLNFVNLAELVSRISRPSH 406
L+ + L+ + VAKLIDGYLAEIA D NL L F LA V +RP
Sbjct: 397 AASPCLDDVMASPSLAPIT--TVAKLIDGYLAEIAPDINLKLPKFQALASAVPEYARPLD 454
Query: 407 DGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASLHAVQNERLPTRVIVQVLHFE 466
DGLYRAID YLK H +S+ E++ +C+LMDC+KLS++A HA QNERLP RV+VQVL FE
Sbjct: 455 DGLYRAIDIYLKAHSWLSEAEREQLCRLMDCQKLSLEACTHAAQNERLPLRVVVQVLFFE 514
Query: 467 --QVRTAASSGTSTPDIAKGIKDL--SIGSNGSSRSGTT----NPEYDTDGAGTAEELKA 518
Q+RT+ + D +G + L SI ++G + T N L
Sbjct: 515 QLQLRTSIAGCLLVSDNLEGSRPLRSSITTSGEAGGWATAVRENQVLKVGMDNMRMRLSE 574
Query: 519 LRKELASLRQ 528
L KE +++RQ
Sbjct: 575 LEKECSTMRQ 584
>emb|CAE05861.1| OSJNBa0044K18.3 [Oryza sativa (japonica cultivar-group)]
gi|50925129|ref|XP_472874.1| OSJNBa0044K18.3 [Oryza
sativa (japonica cultivar-group)]
Length = 627
Score = 330 bits (845), Expect = 1e-88
Identities = 222/623 (35%), Positives = 323/623 (51%), Gaps = 86/623 (13%)
Query: 3 RYVASELASDIIVSIGDTKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASA 62
R V+++LA+D+ + + F LHKFPL+SK LQ L + + + +++ PGGA A
Sbjct: 20 RSVSTDLATDMQILVDGCLFRLHKFPLLSKCMWLQALC-VESGDGGGAVELPAFPGGAEA 78
Query: 63 FEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHENIEKGNLLFKIDVFLSSSIFRSWKDS 122
FE CAKFCYG+ VT+ +NV+A RCAA LGM E ++GNL K+D FLSS + R WKD+
Sbjct: 79 FEACAKFCYGVAVTIGPHNVVAVRCAAARLGMSEAADRGNLAAKLDAFLSSCLLRRWKDA 138
Query: 123 IILLQTTKSMSPLDEEQKVVNRCIESIANKACVDVSKVDWSYTYNRKKLPEENGFESNQN 182
+ +L +T+ + L EE V +RC++++A A D S +P + S
Sbjct: 139 LAVLHSTRRYAALCEELGVTSRCVDAVAALAVGDASGA----------VPAGSSSSS--- 185
Query: 183 GVRTRNVPKDWWVEDLCELEVDMYKSVITNIKTKEIQSNDVIGEALKAYAYRKLPNFSK- 241
WW D+ EL VD+Y V+ +K IG+ LKAYA R LP +K
Sbjct: 186 --------PPWWARDISELGVDLYWRVMVAVKATGTVHAKAIGDTLKAYARRWLPIAAKN 237
Query: 242 -------------GMIPCEDVSK-HRLIVETIVKLLPSDKGSVSCRFLVKLLKAVIFVES 287
G E +K HRL+VE IV LLP+++ +VSC FL+KLLKA + +
Sbjct: 238 HHAAERTAGGGGGGAANAERATKNHRLLVEKIVSLLPAERNAVSCGFLLKLLKAANILGA 297
Query: 288 EDRIRDVLVKRIGQQLEEASVNDILIKAPD--GEITMYDVGIVQKIVREFLMKDHNSEIE 345
+ L +R+ QLE+A+V+D+LI AP +YDV V I+ EF ++ +
Sbjct: 298 SPASKAELTRRVASQLEDANVSDLLIPAPPPCAGGVLYDVDAVVTILEEFALRQAAASGS 357
Query: 346 LVG---------------GGELEGIRKP---GILSDASKLMVAKLIDGYLAEIA-KDPNL 386
G GELEG R+ +S + + V +L+DG+LA +A KD
Sbjct: 358 PKGSPARAGRHRRSMSAESGELEGARRSTSMAAVSHGAMVRVGRLVDGFLAMVATKDART 417
Query: 387 PLLNFVNLAELVSRISRPSHDGLYRAIDTYLKEHPGISKGEKKSICQLMDCRKLSVDASL 446
PL + +AE V +RP HD LYRAIDTYL+ HP + K +K +C++++CRKLS AS+
Sbjct: 418 PLDKMIAVAEAVPDFARPEHDDLYRAIDTYLRAHPEMDKSSRKKLCRVLNCRKLSEKASM 477
Query: 447 HAVQNERLPTRVIVQVLHFEQVRTAA-SSGTSTPDIAKGIKDLSIGSNGSSRSGTTNP-- 503
HA QNE LP RV+VQVL FE R A SSG A+ D G + S+ GT P
Sbjct: 478 HAAQNELLPLRVVVQVLFFENARAAGLSSGHGNRVAARFPGD---GGDVSALLGTGRPRT 534
Query: 504 ---------------EYDTDGAGTAEELKALRKELASLRQSNGVGNSFKDGDAKPNMDKA 548
DG + E L+ +A+L+ ++ D + D+A
Sbjct: 535 TEENGKDGQSPAAAGSVAADGDWSVEGLRRAASRVATLKM------RLEEEDGEDAGDEA 588
Query: 549 VIGKMK-GLLKSKKSFIKLWASK 570
+ + + GL +S S + A +
Sbjct: 589 FVHRTRAGLARSASSRVTAAAGR 611
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 982,949,356
Number of Sequences: 2540612
Number of extensions: 41033366
Number of successful extensions: 92359
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 91851
Number of HSP's gapped (non-prelim): 242
length of query: 606
length of database: 863,360,394
effective HSP length: 134
effective length of query: 472
effective length of database: 522,918,386
effective search space: 246817478192
effective search space used: 246817478192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)
Medicago: description of AC146551.5