BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146343.4 - phase: 0
(141 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC03540.1| putative protein [Arabidopsis thaliana] gi|15230... 93 1e-18
dbj|BAB10611.1| Na+/H+ antiporter-like protein [Arabidopsis thal... 91 5e-18
dbj|BAB10612.1| Na+/H+ antiporter-like protein [Arabidopsis thal... 88 4e-17
gb|AAX49540.1| cation/H+ exchanger [Arabidopsis thaliana] 83 1e-15
gb|AAC98448.1| hypothetical protein [Arabidopsis thaliana] gi|25... 83 1e-15
ref|NP_180385.2| cation/hydrogen exchanger, putative (CHX8) [Ara... 83 1e-15
emb|CAC03541.1| putative protein [Arabidopsis thaliana] gi|15230... 82 2e-15
gb|AAX49538.1| cation/H+ exchanger [Arabidopsis thaliana] 80 1e-14
ref|NP_172294.2| sodium/hydrogen exchanger family protein [Arabi... 80 1e-14
emb|CAC03542.1| putative protein [Arabidopsis thaliana] gi|15230... 79 2e-14
gb|AAX49541.1| cation/H+ exchanger [Arabidopsis thaliana] 77 1e-13
gb|AAX49542.1| cation/H+ exchanger [Arabidopsis thaliana] 76 2e-13
emb|CAC03543.1| putative protein [Arabidopsis thaliana] gi|15230... 76 2e-13
gb|AAX49544.1| cation/H+ exchanger [Arabidopsis thaliana] gi|455... 75 4e-13
gb|AAC98449.1| hypothetical protein [Arabidopsis thaliana] gi|25... 73 2e-12
gb|AAX49539.1| cation/H+ exchanger [Arabidopsis thaliana] 70 1e-11
dbj|BAC42972.1| unknown protein [Arabidopsis thaliana] gi|519701... 70 1e-11
gb|AAF79832.1| T6D22.24 [Arabidopsis thaliana] 70 1e-11
ref|NP_849611.1| cation/hydrogen exchanger (CHX6a) [Arabidopsis ... 70 1e-11
dbj|BAD43750.1| hypothetical protein [Arabidopsis thaliana] 70 1e-11
>emb|CAC03540.1| putative protein [Arabidopsis thaliana]
gi|15230545|ref|NP_190076.1| cation/hydrogen exchanger,
putative (CHX4) [Arabidopsis thaliana]
gi|11357702|pir||T51787 hypothetical protein F28D10_90 -
Arabidopsis thaliana
Length = 817
Score = 93.2 bits (230), Expect = 1e-18
Identities = 50/127 (39%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Query: 10 KGQSKKILITWVVYHLVSTIKN-DEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVEN 68
K ++ IT V L+S+ + ++ T WD MLD ELL+ VK + ++ + + V +
Sbjct: 687 KRMARDSRITITVVSLISSEQRANQATDWDRMLDLELLRDVKSNVLAGADIVFSEEVVND 746
Query: 69 TSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKAS 128
+ T++ + IA ++D IVGR G KS T+ L W+E+ ELG++GDLL S D N +AS
Sbjct: 747 ANQTSQLLKSIANEYDLFIVGREKGRKSVFTEGLEEWSEFEELGIIGDLLTSQDLNCQAS 806
Query: 129 ILVVQQQ 135
+LV+QQQ
Sbjct: 807 VLVIQQQ 813
>dbj|BAB10611.1| Na+/H+ antiporter-like protein [Arabidopsis thaliana]
gi|15237164|ref|NP_197681.1| cation/hydrogen exchanger,
putative (CHX3) [Arabidopsis thaliana]
Length = 822
Score = 91.3 bits (225), Expect = 5e-18
Identities = 47/115 (40%), Positives = 71/115 (60%), Gaps = 2/115 (1%)
Query: 21 VVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIA 80
+V + + K E T WD MLDDELL+ VK ++ ++ Y + +E+ ++T+ + +
Sbjct: 706 IVRLITTDEKARENTVWDKMLDDELLRDVKS--NTLVDIFYSEKAIEDAAETSSLLRSMV 763
Query: 81 IQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQ 135
D IVGR NG S T+ L W+E+ ELG++GDLL S D N +AS+LV+QQQ
Sbjct: 764 SDFDMFIVGRGNGRTSVFTEGLEEWSEFKELGIIGDLLTSQDFNCQASVLVIQQQ 818
>dbj|BAB10612.1| Na+/H+ antiporter-like protein [Arabidopsis thaliana]
gi|15237167|ref|NP_197682.1| cation/hydrogen exchanger,
putative (CHX9) [Arabidopsis thaliana]
Length = 800
Score = 88.2 bits (217), Expect = 4e-17
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 8 WLKGQSKKILITWVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVE 67
W+ GQ+ ++ +T V +S + D+ +WD ++DDE+L +K Y +N Y + V
Sbjct: 672 WM-GQNSRVCLT--VIRFLSGQELDKSKNWDYLVDDEVLNDLKATYSLANNFNYMEKVVN 728
Query: 68 NTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKA 127
+ +A HD +IVGR + S LA W E PELGV+GDLLAS D +
Sbjct: 729 GGPAVATTVRLVAEDHDLMIVGRDHEDYSLDLTGLAQWMELPELGVIGDLLASKDLRARV 788
Query: 128 SILVVQQQ 135
S+LVVQQQ
Sbjct: 789 SVLVVQQQ 796
>gb|AAX49540.1| cation/H+ exchanger [Arabidopsis thaliana]
Length = 816
Score = 83.2 bits (204), Expect = 1e-15
Identities = 47/131 (35%), Positives = 75/131 (56%), Gaps = 5/131 (3%)
Query: 10 KGQSKKILITWVVYHLVSTIKNDEFTSWDVMLDD----ELLKGVK-GVYGSVDNVTYEKV 64
K +++ +T V L+++ K+ + T WD MLD EL+K G+ + Y +
Sbjct: 679 KRMARQENVTLTVLRLLASGKSKDATGWDQMLDTVELRELIKSNNAGMVKEETSTIYLEQ 738
Query: 65 EVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTN 124
E+ + +DT+ + +A +D +VGR G T+ + +W E+ ELGV+GD LASPD
Sbjct: 739 EILDGADTSMLLRSMAFDYDLFVVGRTCGENHEATKGIENWCEFEELGVIGDFLASPDFP 798
Query: 125 TKASILVVQQQ 135
+K S+LVVQQQ
Sbjct: 799 SKTSVLVVQQQ 809
>gb|AAC98448.1| hypothetical protein [Arabidopsis thaliana] gi|25407961|pir||G84681
hypothetical protein At2g28180 [imported] - Arabidopsis
thaliana
Length = 822
Score = 83.2 bits (204), Expect = 1e-15
Identities = 47/131 (35%), Positives = 75/131 (56%), Gaps = 5/131 (3%)
Query: 10 KGQSKKILITWVVYHLVSTIKNDEFTSWDVMLDD----ELLKGVK-GVYGSVDNVTYEKV 64
K +++ +T V L+++ K+ + T WD MLD EL+K G+ + Y +
Sbjct: 685 KRMARQENVTLTVLRLLASGKSKDATGWDQMLDTVELRELIKSNNAGMVKEETSTIYLEQ 744
Query: 65 EVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTN 124
E+ + +DT+ + +A +D +VGR G T+ + +W E+ ELGV+GD LASPD
Sbjct: 745 EILDGADTSMLLRSMAFDYDLFVVGRTCGENHEATKGIENWCEFEELGVIGDFLASPDFP 804
Query: 125 TKASILVVQQQ 135
+K S+LVVQQQ
Sbjct: 805 SKTSVLVVQQQ 815
>ref|NP_180385.2| cation/hydrogen exchanger, putative (CHX8) [Arabidopsis thaliana]
Length = 847
Score = 83.2 bits (204), Expect = 1e-15
Identities = 47/131 (35%), Positives = 75/131 (56%), Gaps = 5/131 (3%)
Query: 10 KGQSKKILITWVVYHLVSTIKNDEFTSWDVMLDD----ELLKGVK-GVYGSVDNVTYEKV 64
K +++ +T V L+++ K+ + T WD MLD EL+K G+ + Y +
Sbjct: 710 KRMARQENVTLTVLRLLASGKSKDATGWDQMLDTVELRELIKSNNAGMVKEETSTIYLEQ 769
Query: 65 EVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTN 124
E+ + +DT+ + +A +D +VGR G T+ + +W E+ ELGV+GD LASPD
Sbjct: 770 EILDGADTSMLLRSMAFDYDLFVVGRTCGENHEATKGIENWCEFEELGVIGDFLASPDFP 829
Query: 125 TKASILVVQQQ 135
+K S+LVVQQQ
Sbjct: 830 SKTSVLVVQQQ 840
>emb|CAC03541.1| putative protein [Arabidopsis thaliana]
gi|15230547|ref|NP_190077.1| cation/hydrogen exchanger,
putative (CHX12) [Arabidopsis thaliana]
gi|11357697|pir||T51788 hypothetical protein F28D10_100
- Arabidopsis thaliana
Length = 705
Score = 82.4 bits (202), Expect = 2e-15
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 12 QSKKILITWVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSD 71
Q+ ++ IT V L+S + E T+WD +LD E+L+ +K + +++ Y + V +
Sbjct: 583 QNPRVKIT--VIRLISD-RETESTNWDYILDHEVLEDLKDTEAT-NSIAYTERIVTGGPE 638
Query: 72 TTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILV 131
+ ++ +D ++VGR +G+ SP L W E PELGV+GDLLAS + +++ S+LV
Sbjct: 639 VATTVRSLSEDYDLMVVGRDHGMASPDFDGLMEWVELPELGVIGDLLASRELDSRVSVLV 698
Query: 132 VQQQ 135
VQQQ
Sbjct: 699 VQQQ 702
>gb|AAX49538.1| cation/H+ exchanger [Arabidopsis thaliana]
Length = 811
Score = 80.1 bits (196), Expect = 1e-14
Identities = 42/108 (38%), Positives = 64/108 (58%), Gaps = 2/108 (1%)
Query: 21 VVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIA 80
+V + + K E T WD MLDDELL+ VK ++ ++ Y + +E+ ++T+ + +
Sbjct: 706 IVRLITTDEKARENTVWDKMLDDELLRDVKS--NTLVDIFYSEKAIEDAAETSSLLRSMV 763
Query: 81 IQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKAS 128
D IVGR NG S T+ L W+E+ ELG++GDLL S D N +AS
Sbjct: 764 SDFDMFIVGRGNGRTSVFTEGLEEWSEFKELGIIGDLLTSQDFNCQAS 811
>ref|NP_172294.2| sodium/hydrogen exchanger family protein [Arabidopsis thaliana]
Length = 815
Score = 80.1 bits (196), Expect = 1e-14
Identities = 46/122 (37%), Positives = 63/122 (50%), Gaps = 4/122 (3%)
Query: 18 ITWVVYHLVSTIKNDEFTSWDVMLDD----ELLKGVKGVYGSVDNVTYEKVEVENTSDTT 73
+ V L+ + T WD MLD E+L+ G V Y + V + SDT+
Sbjct: 688 VNLTVLKLIPAKMDGMTTGWDQMLDSAEVKEVLRNNNNTVGQHSFVEYVEETVNDGSDTS 747
Query: 74 EFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQ 133
+ IA D +VGR G+ + AL+ WTE+ ELGV+GDLL S D + S+LVVQ
Sbjct: 748 TLLLSIANSFDLFVVGRSAGVGTDVVSALSEWTEFDELGVIGDLLVSQDFPRRGSVLVVQ 807
Query: 134 QQ 135
QQ
Sbjct: 808 QQ 809
>emb|CAC03542.1| putative protein [Arabidopsis thaliana]
gi|15230549|ref|NP_190078.1| cation/hydrogen exchanger,
putative (CHX11) [Arabidopsis thaliana]
gi|11357698|pir||T51789 hypothetical protein F28D10_110
- Arabidopsis thaliana
Length = 671
Score = 79.3 bits (194), Expect = 2e-14
Identities = 40/101 (39%), Positives = 63/101 (61%), Gaps = 1/101 (0%)
Query: 35 TSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGI 94
+ WD +LD+E LK +K + D + E++ V + + + + +A ++D ++VGR + +
Sbjct: 568 SEWDYILDNEGLKDLKSTESNEDILYTERI-VTSVVEVVKAVQLLAEEYDLMVVGRDHDM 626
Query: 95 KSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQ 135
S L W E PELGV+GDLLA+ D N+K S+LVVQQQ
Sbjct: 627 TSQDLSGLTEWVELPELGVIGDLLAARDLNSKVSVLVVQQQ 667
>gb|AAX49541.1| cation/H+ exchanger [Arabidopsis thaliana]
Length = 789
Score = 76.6 bits (187), Expect = 1e-13
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 8 WLKGQSKKILITWVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVE 67
W+ GQ+ ++ +T V +S + D+ +WD ++DDE+L +K Y +N Y + V
Sbjct: 672 WM-GQNSRVCLT--VIRFLSGQELDKSKNWDYLVDDEVLNDLKATYSLANNFNYMEKVVN 728
Query: 68 NTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKA 127
+ +A HD +IVGR + S LA W E PELGV+GDLLAS D +
Sbjct: 729 GGPAVATTVRLVAEDHDLMIVGRDHEDYSLDLTGLAQWMELPELGVIGDLLASKDLRARV 788
Query: 128 S 128
S
Sbjct: 789 S 789
>gb|AAX49542.1| cation/H+ exchanger [Arabidopsis thaliana]
Length = 780
Score = 75.9 bits (185), Expect = 2e-13
Identities = 39/101 (38%), Positives = 63/101 (61%), Gaps = 1/101 (0%)
Query: 35 TSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGI 94
+ WD +LD+E LK +K + D E++ V ++ + + + +A ++D ++VGR + +
Sbjct: 680 SDWDYILDNEGLKDLKSTEDNKDIDYIERI-VTSSVEVVKAVQLLAEEYDLMVVGRDHDM 738
Query: 95 KSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQ 135
S L W E PELGV+GDLLA+ D ++K S+LVVQQQ
Sbjct: 739 TSQDLSGLMEWVELPELGVIGDLLAARDLSSKVSVLVVQQQ 779
>emb|CAC03543.1| putative protein [Arabidopsis thaliana]
gi|15230551|ref|NP_190079.1| cation/hydrogen exchanger,
putative (CHX10) [Arabidopsis thaliana]
gi|11357699|pir||T51790 hypothetical protein F28D10_120
- Arabidopsis thaliana
Length = 731
Score = 75.9 bits (185), Expect = 2e-13
Identities = 39/101 (38%), Positives = 63/101 (61%), Gaps = 1/101 (0%)
Query: 35 TSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGI 94
+ WD +LD+E LK +K + D E++ V ++ + + + +A ++D ++VGR + +
Sbjct: 628 SDWDYILDNEGLKDLKSTEDNKDIDYIERI-VTSSVEVVKAVQLLAEEYDLMVVGRDHDM 686
Query: 95 KSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQ 135
S L W E PELGV+GDLLA+ D ++K S+LVVQQQ
Sbjct: 687 TSQDLSGLMEWVELPELGVIGDLLAARDLSSKVSVLVVQQQ 727
>gb|AAX49544.1| cation/H+ exchanger [Arabidopsis thaliana]
gi|4558666|gb|AAD22684.1| putative Na/H antiporter
[Arabidopsis thaliana] gi|25411501|pir||B84509 probable
Na/H antiporter [imported] - Arabidopsis thaliana
gi|15225447|ref|NP_178985.1| cation/hydrogen exchanger,
putative (CHX15) [Arabidopsis thaliana]
Length = 821
Score = 74.7 bits (182), Expect = 4e-13
Identities = 38/96 (39%), Positives = 52/96 (53%)
Query: 41 LDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQ 100
LDD+ + + +++ Y + V N +T + + HD IVGR G+ SP T
Sbjct: 695 LDDDYINLFRAENAEYESIVYIEKLVSNGEETVAAVRSMDSSHDLFIVGRGEGMSSPLTA 754
Query: 101 ALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
L W+E PELG +GDLLAS D S+LVVQQ V
Sbjct: 755 GLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYV 790
>gb|AAC98449.1| hypothetical protein [Arabidopsis thaliana] gi|25407959|pir||F84681
hypothetical protein At2g28170 [imported] - Arabidopsis
thaliana gi|15226351|ref|NP_180384.1| cation/hydrogen
exchanger, putative (CHX7) [Arabidopsis thaliana]
Length = 617
Score = 72.8 bits (177), Expect = 2e-12
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Query: 22 VYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVE--VENTSDTTEFISDI 79
+ HL+ + +E LD + +K + S +N ++ +E V+ ++T+ + I
Sbjct: 500 ILHLIPQLTTEESEDSVQKLDYDDIKEIMKTEDSNENDSWICIEKSVKEGAETSVILRSI 559
Query: 80 AIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQ 135
A +D IVGR +G+ S T+ L WTE+ ELG LGD++AS + ++AS+LV+QQQ
Sbjct: 560 AYDYDLFIVGRSSGMNSAVTKGLNEWTEFEELGALGDVIASKEFPSRASVLVLQQQ 615
>gb|AAX49539.1| cation/H+ exchanger [Arabidopsis thaliana]
Length = 810
Score = 69.7 bits (169), Expect = 1e-11
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 27 STIKNDEFTSWDVMLDDELLKGVKGVYGSV-----DNVTYEKVEVENTSDTTEFISDIAI 81
S + NDE W+ L + V + GS VTY V + S+T+ + +A
Sbjct: 694 SEMDNDE---WEQQQSINLKESVTSIVGSNIKENDAKVTYIDKAVSDGSETSRILRAMAN 750
Query: 82 QHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
+D IVG +GI + T ++ WTE+ ELG +GDLLAS + + AS+LVVQ+QV
Sbjct: 751 DYDLFIVGSGSGIGTEATSGISEWTEFNELGPIGDLLASHEYPSSASVLVVQKQV 805
>dbj|BAC42972.1| unknown protein [Arabidopsis thaliana] gi|51970138|dbj|BAD43761.1|
hypothetical protein [Arabidopsis thaliana]
Length = 818
Score = 69.7 bits (169), Expect = 1e-11
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 27 STIKNDEFTSWDVMLDDELLKGVKGVYGSV-----DNVTYEKVEVENTSDTTEFISDIAI 81
S + NDE W+ L + V + GS VTY V + S+T+ + +A
Sbjct: 694 SEMDNDE---WEQQQSINLKESVTSIVGSNIKENDAKVTYIDKAVSDGSETSRILRAMAN 750
Query: 82 QHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
+D IVG +GI + T ++ WTE+ ELG +GDLLAS + + AS+LVVQ+QV
Sbjct: 751 DYDLFIVGSGSGIGTEATSGISEWTEFNELGPIGDLLASHEYPSSASVLVVQKQV 805
>gb|AAF79832.1| T6D22.24 [Arabidopsis thaliana]
Length = 2621
Score = 69.7 bits (169), Expect = 1e-11
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 27 STIKNDEFTSWDVMLDDELLKGVKGVYGSV-----DNVTYEKVEVENTSDTTEFISDIAI 81
S + NDE W+ L + V + GS VTY V + S+T+ + +A
Sbjct: 1681 SEMDNDE---WEQQQSINLKESVTSIVGSNIKENDAKVTYIDKAVSDGSETSRILRAMAN 1737
Query: 82 QHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
+D IVG +GI + T ++ WTE+ ELG +GDLLAS + + AS+LVVQ+QV
Sbjct: 1738 DYDLFIVGSGSGIGTEATSGISEWTEFNELGPIGDLLASHEYPSSASVLVVQKQV 1792
Score = 67.0 bits (162), Expect = 9e-11
Identities = 31/70 (44%), Positives = 49/70 (69%)
Query: 66 VENTSDTTEFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNT 125
V + ++T++ + ++ +D IVGRR+G+ + T+ L W E+ ELGV+GDLLAS +
Sbjct: 2551 VGDGTETSKILHSVSYDYDLFIVGRRSGVGTTVTRGLGDWMEFEELGVIGDLLASEYFPS 2610
Query: 126 KASILVVQQQ 135
+AS+LVVQQQ
Sbjct: 2611 RASVLVVQQQ 2620
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 18 ITWVVYHLVSTIKNDEFTSWDVMLDD----ELLKGVKGVYGSVDNVTYEKVEVENTSDTT 73
+ V L+ + T WD MLD E+L+ G V Y + V + SDT+
Sbjct: 893 VNLTVLKLIPAKMDGMTTGWDQMLDSAEVKEVLRNNNNTVGQHSFVEYVEETVNDGSDTS 952
Query: 74 EFISDIAIQHDFIIVGRRNGIKSPQTQALASWTEYPEL 111
+ IA D +VGR G+ + AL+ WTE+ EL
Sbjct: 953 TLLLSIANSFDLFVVGRSAGVGTDVVSALSEWTEFDEL 990
>ref|NP_849611.1| cation/hydrogen exchanger (CHX6a) [Arabidopsis thaliana]
Length = 818
Score = 69.7 bits (169), Expect = 1e-11
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 27 STIKNDEFTSWDVMLDDELLKGVKGVYGSV-----DNVTYEKVEVENTSDTTEFISDIAI 81
S + NDE W+ L + V + GS VTY V + S+T+ + +A
Sbjct: 694 SEMDNDE---WEQQQSINLKESVTSIVGSNIKENDAKVTYIDKAVSDGSETSRILRAMAN 750
Query: 82 QHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
+D IVG +GI + T ++ WTE+ ELG +GDLLAS + + AS+LVVQ+QV
Sbjct: 751 DYDLFIVGSGSGIGTEATSGISEWTEFNELGPIGDLLASHEYPSSASVLVVQKQV 805
>dbj|BAD43750.1| hypothetical protein [Arabidopsis thaliana]
Length = 818
Score = 69.7 bits (169), Expect = 1e-11
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 27 STIKNDEFTSWDVMLDDELLKGVKGVYGSV-----DNVTYEKVEVENTSDTTEFISDIAI 81
S + NDE W+ L + V + GS VTY V + S+T+ + +A
Sbjct: 694 SEMDNDE---WEQQQSINLKESVTSIVGSNIKENDAKVTYIDKAVSDGSETSRILRAMAN 750
Query: 82 QHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTNTKASILVVQQQV 136
+D IVG +GI + T ++ WTE+ ELG +GDLLAS + + AS+LVVQ+QV
Sbjct: 751 DYDLFIVGSGSGIGTEATSGISEWTEFNELGPIGDLLASHEYPSSASVLVVQKQV 805
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,904,449
Number of Sequences: 2540612
Number of extensions: 9205212
Number of successful extensions: 24481
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 24395
Number of HSP's gapped (non-prelim): 93
length of query: 141
length of database: 863,360,394
effective HSP length: 117
effective length of query: 24
effective length of database: 566,108,790
effective search space: 13586610960
effective search space used: 13586610960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146343.4