BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146343.12 + phase: 0 /pseudo
(176 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS47511.1| ribosomal protein S6 [Glycine max] 339 2e-92
emb|CAB89081.1| S6 ribosomal protein [Asparagus officinalis] gi|... 334 7e-91
ref|NP_914768.1| putative 40S ribosomal protein S6 [Oryza sativa... 330 1e-89
gb|AAG02240.1| ribosomal protein s6 RPS6-2 [Zea mays] 328 4e-89
gb|AAB51304.1| ribosomal protein S6 RPS6-1 [Zea mays] gi|7440313... 328 4e-89
gb|AAR06352.1| ribosomal protein s6 RPS6-2 [Oryza sativa (japoni... 328 5e-89
emb|CAB89407.1| 40S ribsomal protein S6 [Arabidopsis thaliana] g... 328 5e-89
emb|CAA74381.1| ribosomal protein S6 [Arabidopsis thaliana] 328 5e-89
emb|CAB79888.1| ribosomal protein S6-like [Arabidopsis thaliana]... 327 7e-89
gb|AAB88298.1| ribosomal protein S6 [Arabidopsis thaliana] 316 2e-85
gb|AAP46142.1| ribosomal protein S6 [Brassica napus] 311 4e-84
emb|CAA09042.1| 40S ribosomal protein S6 [Cicer arietinum] 271 4e-72
gb|AAH61437.1| 40S ribosomal protein S6 [Xenopus tropicalis] gi|... 231 9e-60
ref|NP_001015548.1| ribosomal protein S6 [Bos taurus] gi|5876042... 225 4e-58
ref|NP_058856.1| ribosomal protein S6 [Rattus norvegicus] gi|667... 224 1e-57
gb|AAH09427.2| RPS6 protein [Homo sapiens] 224 1e-57
gb|AAX43323.1| ribosomal protein S6 [synthetic construct] 224 1e-57
gb|AAH27620.1| Ribosomal protein S6 [Homo sapiens] 224 1e-57
dbj|BAC25813.1| unnamed protein product [Mus musculus] 224 1e-57
gb|AAH13296.1| Ribosomal protein S6 [Homo sapiens] 223 2e-57
>gb|AAS47511.1| ribosomal protein S6 [Glycine max]
Length = 247
Score = 339 bits (869), Expect = 2e-92
Identities = 163/174 (93%), Positives = 169/174 (96%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEFKGYVFKITGGCDKQGFP
Sbjct: 3 FNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRKSVRGCIVSPDLSVLNL+IVKKGEND
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLIIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTDVEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFTTK G K+ +
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSK 176
>emb|CAB89081.1| S6 ribosomal protein [Asparagus officinalis]
gi|20139942|sp|Q9M3V8|RS6_ASPOF 40S ribosomal protein S6
Length = 251
Score = 334 bits (856), Expect = 7e-91
Identities = 161/169 (95%), Positives = 166/169 (97%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDG 169
LPGLTDVEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFT K G
Sbjct: 123 LPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKG 171
>ref|NP_914768.1| putative 40S ribosomal protein S6 [Oryza sativa (japonica
cultivar-group)] gi|22296425|dbj|BAC10193.1| putative
40S ribosomal protein S6 [Oryza sativa (japonica
cultivar-group)]
Length = 250
Score = 330 bits (845), Expect = 1e-89
Identities = 159/174 (91%), Positives = 168/174 (96%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLT GRVRLLLHRGTPCFRG+GRR+GERRRKSVRGCIVS DLSV+NLVIVKKGEND
Sbjct: 63 MKQGVLTAGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSQDLSVINLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTK+G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKNGKKVSK 176
>gb|AAG02240.1| ribosomal protein s6 RPS6-2 [Zea mays]
Length = 251
Score = 328 bits (841), Expect = 4e-89
Identities = 157/174 (90%), Positives = 168/174 (96%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANP+TGCQKKLEIDDDQKLRAF+D+RISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLT GRVRLLLHRGTPCFRG+GRRNGERRRKSVRGCIVS DLSV+NLVIVKKGEND
Sbjct: 63 MKQGVLTSGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVINLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFTTK+G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVNTYRRTFTTKNGKKVSK 176
>gb|AAB51304.1| ribosomal protein S6 RPS6-1 [Zea mays] gi|7440313|pir||T04334
ribosomal protein S6.1, cytosolic - maize
Length = 251
Score = 328 bits (841), Expect = 4e-89
Identities = 157/174 (90%), Positives = 168/174 (96%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANP+TGCQKKLEIDDDQKLRAF+D+RISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPSTGCQKKLEIDDDQKLRAFYDRRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLT GRVRLLLHRGTPCFRG+GRRNGERRRKSVRGCIVS DLSV+NLVIVKKGEND
Sbjct: 63 MKQGVLTSGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVINLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFTTK+G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLNKDDDVRKYVNTYRRTFTTKNGKKVSK 176
>gb|AAR06352.1| ribosomal protein s6 RPS6-2 [Oryza sativa (japonica
cultivar-group)] gi|50920881|ref|XP_470801.1| ribosomal
protein s6 RPS6-2 [Oryza sativa (japonica
cultivar-group)]
Length = 245
Score = 328 bits (840), Expect = 5e-89
Identities = 157/174 (90%), Positives = 168/174 (96%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLT GRVRLLLHRGTPCFRG+GRR+GERRRKSVRGCIVS DLSV+NLVIVKKG+ND
Sbjct: 63 MKQGVLTSGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSQDLSVINLVIVKKGDND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL+KDDDVRKYVNTYRRTFTTK+G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVNTYRRTFTTKNGKKVSK 176
>emb|CAB89407.1| 40S ribsomal protein S6 [Arabidopsis thaliana]
gi|20147379|gb|AAM10399.1| AT5g10360/F12B17_290
[Arabidopsis thaliana] gi|15238142|ref|NP_196598.1| 40S
ribosomal protein S6 (RPS6B) [Arabidopsis thaliana]
gi|16323061|gb|AAL15265.1| AT5g10360/F12B17_290
[Arabidopsis thaliana] gi|15010586|gb|AAK73952.1|
AT5g10360/F12B17_290 [Arabidopsis thaliana]
gi|21542430|sp|P51430|RS6_ARATH 40S ribosomal protein S6
Length = 249
Score = 328 bits (840), Expect = 5e-89
Identities = 158/174 (90%), Positives = 165/174 (94%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKR+SQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVSPDLSVLNLVIVKKG +D
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSK 176
>emb|CAA74381.1| ribosomal protein S6 [Arabidopsis thaliana]
Length = 249
Score = 328 bits (840), Expect = 5e-89
Identities = 158/174 (90%), Positives = 165/174 (94%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKR+SQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVSPDLSVLNLVIVKKG +D
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSD 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL K+DDVRKYVNTYRRTFT K G K+ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSK 176
>emb|CAB79888.1| ribosomal protein S6-like [Arabidopsis thaliana]
gi|3281858|emb|CAA19753.1| ribosomal protein S6 - like
[Arabidopsis thaliana] gi|23397107|gb|AAN31838.1|
putative ribosomal protein S6 [Arabidopsis thaliana]
gi|21280957|gb|AAM45031.1| putative ribosomal protein S6
[Arabidopsis thaliana] gi|15292739|gb|AAK92738.1|
putative ribosomal protein S6 [Arabidopsis thaliana]
gi|15236042|ref|NP_194898.1| 40S ribosomal protein S6
(RPS6A) [Arabidopsis thaliana] gi|7440312|pir||T05100
ribosomal protein S6, cytosolic - Arabidopsis thaliana
Length = 250
Score = 327 bits (839), Expect = 7e-89
Identities = 158/174 (90%), Positives = 164/174 (93%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVSPDLSVLNLVIVKKGEND
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD EKPRMRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K G ++ +
Sbjct: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSK 176
>gb|AAB88298.1| ribosomal protein S6 [Arabidopsis thaliana]
Length = 249
Score = 316 bits (809), Expect = 2e-85
Identities = 155/174 (89%), Positives = 162/174 (93%), Gaps = 1/174 (0%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GDALGEEFKGYVFKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVSPDLSVLNLVIVKKGEND
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD E +MRGPKRASKIRKLFNL K+DDVR YVNTYRR FT K G ++ +
Sbjct: 123 LPGLTDHES-KMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSK 175
>gb|AAP46142.1| ribosomal protein S6 [Brassica napus]
Length = 249
Score = 311 bits (798), Expect = 4e-84
Identities = 152/174 (87%), Positives = 160/174 (91%), Gaps = 1/174 (0%)
Query: 1 FNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFP 60
FNVANPTTGCQKKLEIDDDQKLRAF+DKR+SQEV+GDALGEEFKGY+FKI GGCDKQGFP
Sbjct: 3 FNVANPTTGCQKKLEIDDDQKLRAFYDKRLSQEVSGDALGEEFKGYIFKIMGGCDKQGFP 62
Query: 61 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 120
MKQGVLTPGRVRLLLHRGTPCFRGHGRR GERRRKSVRGCIVS DLSVLNLVIVKKGE D
Sbjct: 63 MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSQDLSVLNLVIVKKGEKD 122
Query: 121 LPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPR 174
LPGLTD E RMRGPKRASKIRKLFN K+DDVRKYVNTYRR FT K G ++ +
Sbjct: 123 LPGLTDTES-RMRGPKRASKIRKLFNFIKEDDVRKYVNTYRRKFTNKKGKEVSK 175
>emb|CAA09042.1| 40S ribosomal protein S6 [Cicer arietinum]
Length = 212
Score = 271 bits (694), Expect = 4e-72
Identities = 131/139 (94%), Positives = 135/139 (96%)
Query: 36 GDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRK 95
GDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRRNGERRRK
Sbjct: 1 GDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRK 60
Query: 96 SVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRK 155
SVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSK+DDVRK
Sbjct: 61 SVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRK 120
Query: 156 YVNTYRRTFTTKDGAKLPR 174
YVNTYRR FTTK G K+ +
Sbjct: 121 YVNTYRRNFTTKAGKKVSK 139
>gb|AAH61437.1| 40S ribosomal protein S6 [Xenopus tropicalis]
gi|45360889|ref|NP_989120.1| 40S ribosomal protein S6
[Xenopus tropicalis]
Length = 247
Score = 231 bits (588), Expect = 9e-60
Identities = 118/170 (69%), Positives = 138/170 (80%), Gaps = 4/170 (2%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N+ANP TG QK +E DD+ KLRAF++KR++QEV+G+ LGEEFKG+VFKI+GG DKQGFPM
Sbjct: 4 NIANPHTGMQKVIECDDELKLRAFYEKRMTQEVDGEHLGEEFKGFVFKISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GR RLLL +G C+R RR GER+RKSVRGCIV PDLSVLNLV+VK G+ ++
Sbjct: 64 KQGVLTNGRARLLLSKGKSCYR--PRRKGERKRKSVRGCIVGPDLSVLNLVVVKAGDAEV 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAK 171
PGLTD PR GPKRAS IRKLFNLSK+DDVRKYV RR F +K G K
Sbjct: 122 PGLTDGHIPRRLGPKRASNIRKLFNLSKEDDVRKYV--IRRKFDSKTGKK 169
>ref|NP_001015548.1| ribosomal protein S6 [Bos taurus] gi|58760429|gb|AAW82123.1|
ribosomal protein S6-like [Bos taurus]
gi|59858415|gb|AAX09042.1| ribosomal protein S6 [Bos
taurus]
Length = 249
Score = 225 bits (574), Expect = 4e-58
Identities = 118/175 (67%), Positives = 139/175 (79%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R KDG K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKDGKK-PRTK 172
>ref|NP_058856.1| ribosomal protein S6 [Rattus norvegicus]
gi|6677809|ref|NP_033122.1| ribosomal protein S6 [Mus
musculus] gi|57093617|ref|XP_531949.1| PREDICTED:
similar to ribosomal protein S6 [Canis familiaris]
gi|62024568|gb|AAH92050.1| Ribosomal protein S6 [Mus
musculus] gi|60688118|gb|AAH90392.1| Ribosomal protein
S6 [Mus musculus] gi|61359219|gb|AAX41685.1| ribosomal
protein S6 [synthetic construct]
gi|67971254|dbj|BAE01969.1| unnamed protein product
[Macaca fascicularis] gi|14714897|gb|AAH10604.1|
Ribosomal protein S6 [Mus musculus]
gi|48735349|gb|AAH71908.1| Ribosomal protein S6 [Homo
sapiens] gi|48735346|gb|AAH71907.1| Ribosomal protein S6
[Homo sapiens] gi|37194798|gb|AAH58149.1| Ribosomal
protein S6 [Rattus norvegicus]
gi|12653505|gb|AAH00524.1| Ribosomal protein S6 [Homo
sapiens] gi|17158044|ref|NP_001001.2| ribosomal protein
S6 [Homo sapiens] gi|51338632|sp|P62753|RS6_HUMAN 40S
ribosomal protein S6 (Phosphoprotein NP33)
gi|51338633|sp|P62754|RS6_MOUSE 40S ribosomal protein S6
(Phosphoprotein NP33) gi|51338614|sp|P62755|RS6_RAT 40S
ribosomal protein S6 gi|66267430|gb|AAH94826.1|
Ribosomal protein S6 [Homo sapiens]
gi|1177549|emb|CAA90936.1| rpS6 [Mus musculus]
gi|54010|emb|CAA68430.1| unnamed protein product [Mus
musculus] gi|36148|emb|CAA47719.1| ribosomal protein S6
[Homo sapiens] gi|26341356|dbj|BAC34340.1| unnamed
protein product [Mus musculus] gi|307393|gb|AAA60289.1|
ribosomal protein S6 gi|206747|gb|AAA42079.1| ribosomal
protein S6 gi|12850632|dbj|BAB28796.1| unnamed protein
product [Mus musculus] gi|12849830|dbj|BAB28498.1|
unnamed protein product [Mus musculus]
gi|12848931|dbj|BAB28142.1| unnamed protein product [Mus
musculus] gi|21104370|dbj|BAB93455.1| ribosomal protein
S6 [Homo sapiens]
Length = 249
Score = 224 bits (570), Expect = 1e-57
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>gb|AAH09427.2| RPS6 protein [Homo sapiens]
Length = 247
Score = 224 bits (570), Expect = 1e-57
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 2 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 61
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 62 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 119
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 120 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 170
>gb|AAX43323.1| ribosomal protein S6 [synthetic construct]
Length = 250
Score = 224 bits (570), Expect = 1e-57
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>gb|AAH27620.1| Ribosomal protein S6 [Homo sapiens]
Length = 249
Score = 224 bits (570), Expect = 1e-57
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>dbj|BAC25813.1| unnamed protein product [Mus musculus]
Length = 249
Score = 224 bits (570), Expect = 1e-57
Identities = 117/175 (66%), Positives = 139/175 (78%), Gaps = 6/175 (3%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGAKLPRYK 176
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV R K+G K PR K
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKEGKK-PRTK 172
>gb|AAH13296.1| Ribosomal protein S6 [Homo sapiens]
Length = 249
Score = 223 bits (568), Expect = 2e-57
Identities = 110/156 (70%), Positives = 131/156 (83%), Gaps = 2/156 (1%)
Query: 2 NVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPM 61
N++ P TGCQK +E+DD++KLR F++KR++ EV DALGEE+KGYV +I+GG DKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 62 KQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDL 121
KQGVLT GRVRLLL +G C+R RR GER+RKSVRGCIV +LSVLNLVIVKKGE D+
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDI 121
Query: 122 PGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYV 157
PGLTD PR GPKRAS+IRKLFNLSK+DDVR+YV
Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV 157
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 322,625,804
Number of Sequences: 2540612
Number of extensions: 13719719
Number of successful extensions: 25230
Number of sequences better than 10.0: 199
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 24891
Number of HSP's gapped (non-prelim): 205
length of query: 176
length of database: 863,360,394
effective HSP length: 119
effective length of query: 57
effective length of database: 561,027,566
effective search space: 31978571262
effective search space used: 31978571262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)
Medicago: description of AC146343.12