BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146341.8 + phase: 0
(268 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38695.1| putative F-box protein [Solanum demissum] 58 2e-07
gb|AAU93581.1| putative F-box protein [Solanum demissum] 57 5e-07
dbj|BAB01261.1| unnamed protein product [Arabidopsis thaliana] g... 57 7e-07
gb|AAT38719.1| putative F-Box protein [Solanum demissum] 55 2e-06
dbj|BAD68914.1| unknown protein [Oryza sativa (japonica cultivar... 55 3e-06
gb|AAT39293.1| putative F-box-like protein [Solanum demissum] 54 3e-06
ref|NP_174618.1| F-box family protein [Arabidopsis thaliana] gi|... 52 1e-05
gb|AAM15177.1| hypothetical protein [Arabidopsis thaliana] gi|38... 50 5e-05
gb|AAP55062.1| unknown protein [Oryza sativa (japonica cultivar-... 50 9e-05
emb|CAB80550.1| putative protein [Arabidopsis thaliana] gi|44903... 49 1e-04
dbj|BAB10989.1| unnamed protein product [Arabidopsis thaliana] g... 49 2e-04
pir||D86381 hypothetical protein F4F7.4 [imported] - Arabidopsis... 48 3e-04
pir||A86381 hypothetical protein F4F7.1 [imported] - Arabidopsis... 48 3e-04
emb|CAC07923.1| putative protein [Arabidopsis thaliana] gi|15231... 47 4e-04
ref|NP_564505.1| F-box family protein [Arabidopsis thaliana] gi|... 47 6e-04
gb|AAF02818.1| hypothetical protein [Arabidopsis thaliana] gi|15... 47 7e-04
gb|AAF21197.1| unknown protein [Arabidopsis thaliana] gi|1598347... 46 0.001
emb|CAB62106.1| putative protein [Arabidopsis thaliana] gi|15229... 46 0.001
gb|AAM89220.1| suppressor of nim1-1 [Arabidopsis thaliana] gi|22... 46 0.001
dbj|BAB02038.1| unnamed protein product [Arabidopsis thaliana] g... 46 0.001
>gb|AAT38695.1| putative F-box protein [Solanum demissum]
Length = 427
Score = 58.2 bits (139), Expect = 2e-07
Identities = 51/172 (29%), Positives = 78/172 (44%), Gaps = 43/172 (25%)
Query: 25 MFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPP--------RLIL 76
+ LP+ELI +IL L VK++ + +C+SKSW LIS PTFV+ +K RLI
Sbjct: 51 LLLPDELITEILLKLPVKSLSKFMCVSKSWLQLISSPTFVKNHIKLTADDKGYIHHRLIF 110
Query: 77 K-----------PPCWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISC 125
+ PP + T + I ++ +++ +V S
Sbjct: 111 RNIDGNFKFCSLPPLFTKQQHTEELFHIDSPIERSTLST---------------HIVGSV 155
Query: 126 NGLLCFIFCSDNKEYHNYWFRIWNPATGTRSKALGTNHDYNLQLRSLRFNFG 177
NGL+C + KE + IWNP T T+SK L N+ S+++ FG
Sbjct: 156 NGLICVV--HGQKEAY-----IWNP-TITKSKEL-PKFTSNMCSSSIKYGFG 198
>gb|AAU93581.1| putative F-box protein [Solanum demissum]
Length = 383
Score = 57.0 bits (136), Expect = 5e-07
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 23 LSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPP--------RL 74
+ + LP+ELI +IL L +K++ + +C+SKSW LIS P FV+K +K RL
Sbjct: 7 IPLLLPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYHRL 66
Query: 75 ILKPP------CWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGL 128
I + C + P+ T Q L I +L S + +V S NGL
Sbjct: 67 IFRNTNNDFKFCPLPPLFTNQQL-IEEILHIDSPIERTTL---------STHIVGSVNGL 116
Query: 129 LCFIFCSDNKEYHNYWFRIWNPATGTRSKALGTNHDYNLQLRSLRFNFG 177
+C + Y IWNPA T+SK L + NL ++ FG
Sbjct: 117 ICVAHVRQREAY------IWNPAI-TKSKELPKSTS-NLCSDGIKCGFG 157
>dbj|BAB01261.1| unnamed protein product [Arabidopsis thaliana]
gi|15233315|ref|NP_188242.1| F-box family protein
[Arabidopsis thaliana]
Length = 360
Score = 56.6 bits (135), Expect = 7e-07
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 23 LSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWV 82
+S FLPEEL +IL L +K + R C+ K+W LI+DP F + P +
Sbjct: 1 MSKFLPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKN 60
Query: 83 YPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLCFIFCSDNKEYHN 142
+ M ++ K+P IT DF D + D V+ C+G LC N
Sbjct: 61 FYMLDVEG-------KHPVITNKLDFPLD-QSMIDESTCVLHCDGTLCVTL-------KN 105
Query: 143 YWFRIWNP 150
+ +WNP
Sbjct: 106 HTLMVWNP 113
>gb|AAT38719.1| putative F-Box protein [Solanum demissum]
Length = 327
Score = 55.5 bits (132), Expect = 2e-06
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 25 MFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPP--------RLIL 76
+ LP+ELI +IL L +K++L+ +C+SKSW LIS P FV+ +K RLI
Sbjct: 10 LLLPDELITEILLKLPIKSLLKFMCVSKSWLQLISSPAFVKNHIKLTADDKGYIYHRLIF 69
Query: 77 KPP------CWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLC 130
+ C + P+ T Q L I L S + +V S NGL+C
Sbjct: 70 RNTNDDFKFCPLPPLFTQQQL-IKELYHIDSPIERTTL---------STHIVGSVNGLIC 119
Query: 131 FIFCSDNKEYHNYWFRIWNPATGTRSKALGTNHDYNLQLRSLRFNFG 177
+ Y IWNP T T+SK L + NL ++ FG
Sbjct: 120 AAHVRQREAY------IWNP-TITKSKELPKSRS-NLCSDGIKCGFG 158
>dbj|BAD68914.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 433
Score = 54.7 bits (130), Expect = 3e-06
Identities = 46/151 (30%), Positives = 70/151 (45%), Gaps = 14/151 (9%)
Query: 3 YSKLMSIKKKKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPT 62
Y+ + S K + + K K T + L ++L+ ILS L +K++ C+ KSW +L SD
Sbjct: 41 YTAINSTLKGEMNSKKSKCTCT--LTDDLVVDILSRLPLKSVCCFKCVCKSWASLFSDQY 98
Query: 63 FVQKQLKRPPRLILKPPCWVYPMRTIQSLPITRLLK-NPSITVSGDFCYDGGGLNDNCKV 121
F K +RP L+ Y S+ I +L N I S F ++N K+
Sbjct: 99 FCTKLPRRPAGLL-------YQDSNNSSIQIAKLPSGNSEIGTSLSFMPH----HENLKL 147
Query: 122 VISCNGLLCFIFCSDNKEYHNYWFRIWNPAT 152
V NGL+ F S + + F + NPAT
Sbjct: 148 VDCSNGLILFTHGSKSDSPDSSHFIVCNPAT 178
>gb|AAT39293.1| putative F-box-like protein [Solanum demissum]
Length = 384
Score = 54.3 bits (129), Expect = 3e-06
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 25 MFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPP--------RLIL 76
+ LP+ELI +IL L +K++ + +C+SKSW LIS P FV+ +K RLI
Sbjct: 10 LLLPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKNHIKLTANGKGYIYHRLIF 69
Query: 77 KPPCWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLCFIFCSD 136
+ + + SL K I D + +V S NGL+C
Sbjct: 70 RNTNDDFKFCPLPSL----FTKQQLIEELFDIVSPIERTTLSTHIVGSVNGLICAAHVRQ 125
Query: 137 NKEYHNYWFRIWNPATGTRSKALGTNHDYNLQLRSLRFNFGSEAFGSCYYDYR 189
+ Y IWNP T T+SK L + NL ++ FG + + DY+
Sbjct: 126 REAY------IWNP-TITKSKELPKSRS-NLCSDGIKCGFG---YDESHDDYK 167
>ref|NP_174618.1| F-box family protein [Arabidopsis thaliana] gi|25513466|pir||B86459
50.0K hypothetical protein F10C21.17 - Arabidopsis
thaliana gi|12322373|gb|AAG51205.1| hypothetical
protein; 83642-85072 [Arabidopsis thaliana]
Length = 441
Score = 52.4 bits (124), Expect = 1e-05
Identities = 65/274 (23%), Positives = 113/274 (40%), Gaps = 74/274 (27%)
Query: 11 KKKKDKKNK-----KLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQ 65
+KK+++ K + TL++ LP+ L+ +IL L VK ++RL +SK W +LI +
Sbjct: 76 RKKQERSGKSPSCSETTLAVELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAE 135
Query: 66 KQLKRPPRLILKPPCWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLN-------DN 118
K L RL+ K Y ++ I+ + ++ S ++ F G+N D
Sbjct: 136 KHL----RLLEKK----YGLKEIK----ITVERSTSKSICIKFFSRRSGMNAINSDSDDL 183
Query: 119 CKVVISCNGLLCFIFCSDNKEYHNYWFRIWNPATGTRSKALGTNHDYNLQLRSLRFNFGS 178
+V SCNGL+C E + + + NP TG R+L G+
Sbjct: 184 LRVPGSCNGLVCVY------ELDSVYIYLLNPMTGV--------------TRTLTPPRGT 223
Query: 179 EAFGSCYYDYRRRYLLGCLKFTFGCGILSGTYKTVEFRAKGDEENKYGPWRSQVRILSLS 238
+ L FG +++GTYK + YG R + L
Sbjct: 224 K-----------------LSVGFGIDVVTGTYKVMVL---------YGFDRVGTVVFDLD 257
Query: 239 DDCWR----NIDSFPVIPLISPFNNGVYLSGTIY 268
+ WR P+ + +P N V+++G+++
Sbjct: 258 TNKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLF 291
>gb|AAM15177.1| hypothetical protein [Arabidopsis thaliana]
gi|3860278|gb|AAC73046.1| hypothetical protein
[Arabidopsis thaliana] gi|18401449|ref|NP_565653.1|
F-box family protein [Arabidopsis thaliana]
gi|25345718|pir||H84673 hypothetical protein At2g27520
[imported] - Arabidopsis thaliana
Length = 347
Score = 50.4 bits (119), Expect = 5e-05
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 54/252 (21%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPR---LILKPPCWVY 83
LP +L+ +ILS L ++ RL K WN L DP F+ KQ + + +++ VY
Sbjct: 6 LPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLSNFGVY 65
Query: 84 PMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLCFIFCSDNKEYHNY 143
M T L + P+ N V CNGLL CS +E +
Sbjct: 66 SMS-------TNLKEIPN--------------NIEIAQVFHCNGLL---LCS-TEEGNKT 100
Query: 144 WFRIWNPATG-TRSKALGTNHDYNLQLRSLRFNFGSEAFGSCYYDYRRRYLLGCLKFTFG 202
+ NP TG TR T+++YN + +G+ + Y Y+ L+ T+G
Sbjct: 101 KLVVVNPCTGQTRWIEPRTDYNYN---HDIALGYGNNSTKKSYDSYK------ILRITYG 151
Query: 203 CGIL------SGTYKTVEFRAKGDEENKYGP--------WRSQVRILSLSDDCWRNIDSF 248
C ++ S +++ + E++ YG W S + LS D ++F
Sbjct: 152 CKLVEIFELKSNSWRVLSKVHPNVEKHYYGGVSFKGNTYWLSYTKFNILSFDF--TTETF 209
Query: 249 PVIPLISPFNNG 260
+PL + +G
Sbjct: 210 RSVPLPFLYQDG 221
>gb|AAP55062.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37536946|ref|NP_922775.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|18854994|gb|AAL79686.1| unknown protein [Oryza
sativa]
Length = 445
Score = 49.7 bits (117), Expect = 9e-05
Identities = 24/74 (32%), Positives = 43/74 (57%), Gaps = 5/74 (6%)
Query: 10 KKKKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQL- 68
K+K+ T LPEE++ +IL+ L VK++LR + + W +IS+P+F++ QL
Sbjct: 38 KRKRTVVPPAAATFPDLLPEEIVVEILARLPVKSLLRFKSVCRGWRAIISEPSFIRTQLQ 97
Query: 69 ----KRPPRLILKP 78
K+ P +++ P
Sbjct: 98 CSASKQEPSILISP 111
>emb|CAB80550.1| putative protein [Arabidopsis thaliana] gi|4490339|emb|CAB38621.1|
putative protein [Arabidopsis thaliana]
gi|15234860|ref|NP_195598.1| F-box family protein
[Arabidopsis thaliana] gi|7487838|pir||T06086
hypothetical protein T9A14.150 - Arabidopsis thaliana
Length = 426
Score = 48.9 bits (115), Expect = 1e-04
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 8 SIKKKKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDP----TF 63
S + ++ K K S LP +LI +IL L +K ++R +C+SK W ++I DP F
Sbjct: 34 STMETQRKKFTKVSVNSELLPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLF 93
Query: 64 VQKQLKRPPRLI 75
+ + LKRP L+
Sbjct: 94 LNESLKRPKSLV 105
>dbj|BAB10989.1| unnamed protein product [Arabidopsis thaliana]
gi|15241447|ref|NP_199235.1| F-box family protein
[Arabidopsis thaliana]
Length = 295
Score = 48.5 bits (114), Expect = 2e-04
Identities = 37/128 (28%), Positives = 60/128 (45%), Gaps = 24/128 (18%)
Query: 12 KKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISD----PTFVQKQ 67
+KK +++ T S LP +LI +IL L KT+ R +C+SK W+++I F+ +
Sbjct: 47 RKKVSDDRRSTNSDLLPMDLIKEILKRLPAKTLARFLCVSKLWSSIIRSRDLMKLFLTES 106
Query: 68 LKRPPRLIL----KPPCWVYPMRTIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVI 123
RP RL K C+++ +S T L P+ G +NC V
Sbjct: 107 SARPGRLFFTFRRKDDCFLFSSE--ESSVATYLFTIPA-----------SGYTNNCSFV- 152
Query: 124 SCNGLLCF 131
+GL+C+
Sbjct: 153 --HGLICY 158
>pir||D86381 hypothetical protein F4F7.4 [imported] - Arabidopsis thaliana
Length = 1012
Score = 47.8 bits (112), Expect = 3e-04
Identities = 42/152 (27%), Positives = 69/152 (44%), Gaps = 23/152 (15%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWVYPMR 86
LPE L+ +IL + ++ +L K WN L D F +K L + P+ L +R
Sbjct: 5 LPEHLLEEILYRVPAMSLKQLGSTCKGWNCLFKDRRFTRKHLDKGPKQFLIHMSKGLRVR 64
Query: 87 TIQSLPITRLLKNPSITVSGDF---------CYDGGGLNDNCKV--VISCNGLLCFIFCS 135
++ S+ + RL P + V+ +F C D D ++ V C+GLL C
Sbjct: 65 SM-SVDLHRL---PHVKVTVEFTLINPKYPSCLD----QDQFEIYKVSHCDGLL---LCV 113
Query: 136 DNKEYHNYWFRIWNPATGTRSKALGTNHDYNL 167
+ N W +WNP TG +++ + D+ L
Sbjct: 114 CVTKEDNTWLAVWNPCTG-QTRIIDATLDFKL 144
>pir||A86381 hypothetical protein F4F7.1 [imported] - Arabidopsis thaliana
Length = 1020
Score = 47.8 bits (112), Expect = 3e-04
Identities = 42/152 (27%), Positives = 69/152 (44%), Gaps = 23/152 (15%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWVYPMR 86
LPE L+ +IL + ++ +L K WN L D F +K L + P+ L +R
Sbjct: 5 LPEHLLEEILYRVPAMSLKQLGSTCKGWNCLFKDRRFTRKHLDKGPKQFLIHMSKGLRVR 64
Query: 87 TIQSLPITRLLKNPSITVSGDF---------CYDGGGLNDNCKV--VISCNGLLCFIFCS 135
++ S+ + RL P + V+ +F C D D ++ V C+GLL C
Sbjct: 65 SM-SVDLHRL---PHVKVTVEFTLINPKYPSCLD----QDQFEIYKVSHCDGLL---LCV 113
Query: 136 DNKEYHNYWFRIWNPATGTRSKALGTNHDYNL 167
+ N W +WNP TG +++ + D+ L
Sbjct: 114 CVTKEDNTWLAVWNPCTG-QTRIIDATLDFKL 144
>emb|CAC07923.1| putative protein [Arabidopsis thaliana]
gi|15231179|ref|NP_190800.1| F-box family protein
[Arabidopsis thaliana] gi|11281326|pir||T46102
hypothetical protein T25B15.90 - Arabidopsis thaliana
Length = 390
Score = 47.4 bits (111), Expect = 4e-04
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 1 MRYSKLMSIKKKKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISD 60
M S ++++KK+K K+ K + +PEE++ IL L K+++R C+SK W +LI+
Sbjct: 1 MGSSLCVAVRKKEKQKQKKTVVFLPEIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITS 60
Query: 61 PTFVQKQLK 69
F + K
Sbjct: 61 RYFTNRFFK 69
>ref|NP_564505.1| F-box family protein [Arabidopsis thaliana] gi|25352628|pir||F96514
hypothetical protein T3F24.1 [imported] - Arabidopsis
thaliana gi|9993346|gb|AAG11419.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 370
Score = 47.0 bits (110), Expect = 6e-04
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 20/124 (16%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWVYPMR 86
LP ELI +ILS + ++++R +SK WN L D F+ K R IL Y
Sbjct: 7 LPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFINNH-KMTFRFILATESKFY--- 62
Query: 87 TIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLCFIFCSDNKEYHNYWFR 146
S+ +T P I V + D GL K++I CNG F+ C KE
Sbjct: 63 ---SVSMT-----PKIEVR-ELSLDIPGLELKPKILIDCNG---FLLCGMEKE----GIV 106
Query: 147 IWNP 150
+WNP
Sbjct: 107 VWNP 110
>gb|AAF02818.1| hypothetical protein [Arabidopsis thaliana]
gi|15228241|ref|NP_187635.1| F-box protein-related
[Arabidopsis thaliana]
Length = 389
Score = 46.6 bits (109), Expect = 7e-04
Identities = 22/65 (33%), Positives = 42/65 (63%), Gaps = 2/65 (3%)
Query: 12 KKKDKKNKKLTLSMFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRP 71
++K K++K + S +P +L+++IL L K++ R C+SK W+++ ++P F+ R
Sbjct: 14 QRKSKRSKSGSSS--IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFINLLTTRS 71
Query: 72 PRLIL 76
PRL+L
Sbjct: 72 PRLLL 76
>gb|AAF21197.1| unknown protein [Arabidopsis thaliana] gi|15983479|gb|AAL11607.1|
AT3g07870/F17A17_21 [Arabidopsis thaliana]
gi|18398079|ref|NP_566322.1| F-box family protein
[Arabidopsis thaliana]
Length = 417
Score = 46.2 bits (108), Expect = 0.001
Identities = 57/229 (24%), Positives = 97/229 (41%), Gaps = 31/229 (13%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWVYPMR 86
LPE++IA I S L + +I RL+ + +SW ++++ + P + L C P+R
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHC-DSPIR 86
Query: 87 TIQSLPITRLLKNPSITVSGDFCYDGGGLNDNCKVVISCNGLLCFIFCSDNKEYHNYWFR 146
L L + + F VV SCNGLLC + +N
Sbjct: 87 --NGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCL-----SDSLYNDSLY 139
Query: 147 IWNPATGTRSKALGTNHDYNLQLRSLRFNFGSEAFGSCYYDYRRRYLLGCLKFTFGCGIL 206
++NP T + ++ Y+ Q L F FG +++ + Y + LK + G
Sbjct: 140 LYNPFTTNSLELPECSNKYHDQ--ELVFGFG-------FHEMTKEYKV--LKIVYFRG-- 186
Query: 207 SGTYKTVEFRAKGDEENKYGPWRSQVRILSLSDD------CWRNIDSFP 249
S + +R +G + K +S+V+IL+LS WR++ P
Sbjct: 187 SSSNNNGIYRGRGRIQYK----QSEVQILTLSSKTTDQSLSWRSLGKAP 231
>emb|CAB62106.1| putative protein [Arabidopsis thaliana]
gi|15229648|ref|NP_190567.1| F-box family protein
[Arabidopsis thaliana] gi|11281398|pir||T45851
hypothetical protein F3A4.60 - Arabidopsis thaliana
Length = 382
Score = 46.2 bits (108), Expect = 0.001
Identities = 53/234 (22%), Positives = 85/234 (35%), Gaps = 56/234 (23%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPR----LILKPPCWV 82
LP+EL+ +IL + ++ +L K WN L +D TF +K + P+ +L+ C
Sbjct: 5 LPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPKQFLITVLEERC-- 62
Query: 83 YPMRTIQSLPITRLLKNPSITVSGDFC---YDGGGLNDNCKVVISCNGLLCFIFCSDNKE 139
+ SL I PS +G+ Y + C+GL D +
Sbjct: 63 ----RLSSLSINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTR- 117
Query: 140 YHNYWFRIWNPATGTRS-KALGTNHDYNLQLRSLRFNFGSEAFGSCYYDYRRRYLLGCLK 198
+WNP TG + G N D N G + Y D +
Sbjct: 118 -----IVVWNPCTGQKKWIQTGENLDEN----------GQDFVLGYYQDNKSS------- 155
Query: 199 FTFGCGILSGTYKTVEFRA--KGDEENKYGPWRSQVRILSLSDDCWRNIDSFPV 250
+YK + ++ GD+E K I + + WRN+D P+
Sbjct: 156 --------DKSYKILSYKGYNYGDQEFK---------IYDIKSNTWRNLDVTPI 192
>gb|AAM89220.1| suppressor of nim1-1 [Arabidopsis thaliana]
gi|2262162|gb|AAB86508.1| unknown protein [Arabidopsis
thaliana] gi|15227809|ref|NP_179323.1| F-box family
protein [Arabidopsis thaliana] gi|25352635|pir||F84550
hypothetical protein At2g17310 [imported] - Arabidopsis
thaliana
Length = 370
Score = 46.2 bits (108), Expect = 0.001
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 25 MFLPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRP-PRLILKPPCWVY 83
M LP EL ILS L +++R +SK WN+L +D TF+ L R P I+ +Y
Sbjct: 1 MALPWELEEDILSRLPPISLVRFRTVSKHWNSLFNDKTFINNHLSRSRPEFIILTNSKIY 60
Query: 84 PMRTIQSLPITRLLKNPSITVSGDFCYD--GGGLNDNCKVVISCNGLLCFIFCSDNKEYH 141
+ I I +P+I + YD G + N ++ +C+ L + N Y
Sbjct: 61 SVDIIDHNNI-----DPTIRLHEIPTYDIHSRGTDLNRTIINTCDEFLFY-----NYRYW 110
Query: 142 NYWFRIWNP 150
+ +WNP
Sbjct: 111 DNMTALWNP 119
>dbj|BAB02038.1| unnamed protein product [Arabidopsis thaliana]
gi|15229053|ref|NP_188376.1| F-box family protein
[Arabidopsis thaliana]
Length = 388
Score = 46.2 bits (108), Expect = 0.001
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 27 LPEELIAQILSLLDVKTILRLICLSKSWNTLISDPTFVQKQLKRPPRLILKPPCWVYPMR 86
L E+L+ +ILS + ++ RL K WN L +D F +K + P+ L + +
Sbjct: 6 LSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLKDFRIY 65
Query: 87 TIQSLPITRLLKNPSITVSGDFCYDGGGLND----NCKVVISCNGLLCFIFCSDNKEYHN 142
++ S + LL N +I + +F LND + C+GL I CS + N
Sbjct: 66 SMSS-NLHGLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGL---ILCSTKR---N 118
Query: 143 YWFRIWNPATG 153
+WNP TG
Sbjct: 119 TRLVVWNPCTG 129
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.142 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,871,666
Number of Sequences: 2540612
Number of extensions: 21255977
Number of successful extensions: 44002
Number of sequences better than 10.0: 356
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 43643
Number of HSP's gapped (non-prelim): 388
length of query: 268
length of database: 863,360,394
effective HSP length: 126
effective length of query: 142
effective length of database: 543,243,282
effective search space: 77140546044
effective search space used: 77140546044
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 74 (33.1 bits)
Medicago: description of AC146341.8