BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146341.2 - phase: 0 /pseudo
         (875 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP40468.1| unknown protein [Arabidopsis thaliana] gi|4256619...    57  3e-06
emb|CAB80802.1| putative protein [Arabidopsis thaliana] gi|60498...    57  3e-06
gb|AAC28549.1| hypothetical protein [Arabidopsis thaliana] gi|15...    48  0.002
emb|CAE03490.2| OSJNBa0065O17.15 [Oryza sativa (japonica cultiva...    39  0.75
gb|AAP54922.1| unknown protein [Oryza sativa (japonica cultivar-...    37  3.7

>gb|AAP40468.1| unknown protein [Arabidopsis thaliana]
          gi|42566192|ref|NP_191954.3| expressed protein
          [Arabidopsis thaliana]
          Length = 831

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)

Query: 1  MAKKSQRRAV-RYEKDKAGCMWGFISMLDFRHGHSTRKLIADKRRSS 46
          MAKK+QRRA  R E+++ GCMWGF++M  FRHG    KL+ D++ +S
Sbjct: 1  MAKKTQRRAAARQEREQLGCMWGFMNMFSFRHGPLAHKLLLDQKHAS 47


>emb|CAB80802.1| putative protein [Arabidopsis thaliana] gi|6049884|gb|AAF02799.1|
          F5I10.23 gene product [Arabidopsis thaliana]
          gi|2252842|gb|AAB62841.1| A_IG005I10.23 gene product
          [Arabidopsis thaliana] gi|7485266|pir||T01527
          hypothetical protein A_IG005I10.23 - Arabidopsis
          thaliana
          Length = 770

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)

Query: 1  MAKKSQRRAV-RYEKDKAGCMWGFISMLDFRHGHSTRKLIADKRRSS 46
          MAKK+QRRA  R E+++ GCMWGF++M  FRHG    KL+ D++ +S
Sbjct: 1  MAKKTQRRAAARQEREQLGCMWGFMNMFSFRHGPLAHKLLLDQKHAS 47


>gb|AAC28549.1| hypothetical protein [Arabidopsis thaliana]
          gi|15225907|ref|NP_182114.1| expressed protein
          [Arabidopsis thaliana] gi|7486456|pir||T02457
          hypothetical protein At2g45900 [imported] - Arabidopsis
          thaliana
          Length = 720

 Score = 47.8 bits (112), Expect = 0.002
 Identities = 23/47 (48%), Positives = 32/47 (67%), Gaps = 2/47 (4%)

Query: 1  MAKKSQRRAVRYEKDKAGCMWGFISMLDFRHGHSTRKLIADKRRSSK 47
          M K+  RR +   ++  GC+W F+SM DFRHG S +KL+ DK+R SK
Sbjct: 1  MEKEICRRHL--SREGLGCVWVFMSMFDFRHGGSNQKLLMDKKRRSK 45


>emb|CAE03490.2| OSJNBa0065O17.15 [Oryza sativa (japonica cultivar-group)]
          gi|50927901|ref|XP_473478.1| OSJNBa0065O17.15 [Oryza
          sativa (japonica cultivar-group)]
          Length = 859

 Score = 38.9 bits (89), Expect = 0.75
 Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 5/54 (9%)

Query: 1  MAKKSQRRAVRYEKDKAGCMWGFISMLDFRHGHSTRKLIADK--RRSSKHSEGK 52
          MAKKS ++  + EK   GCM G I M DFR    + KLI+D   RRSS  S+ K
Sbjct: 1  MAKKSYKQRCKSEKVHMGCMSGLIHMFDFRR---SPKLISDGTIRRSSVRSDLK 51


>gb|AAP54922.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          gi|37536666|ref|NP_922635.1| unknown protein [Oryza
          sativa (japonica cultivar-group)]
          gi|13876517|gb|AAK43493.1| unknown protein [Oryza
          sativa (japonica cultivar-group)]
          Length = 901

 Score = 36.6 bits (83), Expect = 3.7
 Identities = 16/49 (32%), Positives = 29/49 (58%), Gaps = 2/49 (4%)

Query: 1  MAKKSQRRAVRYEKDKAGCMWGFISMLDFRHGHSTRKLIADKRRSSKHS 49
          M ++S +R+   E++  GC+WG + ML FR     + L+  K+ S +H+
Sbjct: 1  MGRRSHKRSTEQEENNVGCVWGLMRMLYFR--RDAKFLLDTKQVSRRHT 47


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.374    0.166    0.667 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,135,494,641
Number of Sequences: 2540612
Number of extensions: 37465452
Number of successful extensions: 176262
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 176257
Number of HSP's gapped (non-prelim): 5
length of query: 875
length of database: 863,360,394
effective HSP length: 137
effective length of query: 738
effective length of database: 515,296,550
effective search space: 380288853900
effective search space used: 380288853900
T: 11
A: 40
X1: 13 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 35 (21.5 bits)
S2: 80 (35.4 bits)