Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146332.8 - phase: 0 /pseudo
         (199 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL06537.1| AT3g11590/F24K9_26 [Arabidopsis thaliana]               96  6e-19
gb|AAN72254.1| At3g11590/F24K9_26 [Arabidopsis thaliana] gi|1232...    96  6e-19
gb|AAM91355.1| At5g22310/MWD9_9 [Arabidopsis thaliana] gi|184204...    68  2e-10
dbj|BAB08329.1| unnamed protein product [Arabidopsis thaliana]         66  6e-10
ref|XP_636178.1| hypothetical protein DDB0188445 [Dictyostelium ...    37  0.32
ref|NP_572751.1| CG15741-PA [Drosophila melanogaster] gi|7292702...    36  0.72
emb|CAH77277.1| conserved hypothetical protein [Plasmodium chaba...    35  0.94
ref|XP_464896.1| intracellular protein transport protein USO1-li...    35  1.2
gb|AAP68906.1| Prion-like-(q/n-rich)-domain-bearing protein prot...    35  1.6
gb|AAP68905.1| Prion-like-(q/n-rich)-domain-bearing protein prot...    35  1.6
ref|NP_871824.1| prion-like Q/N-rich domain protein PQN-64, Prio...    35  1.6
ref|NP_491209.2| prion-like Q/N-rich domain protein PQN-64, Prio...    35  1.6
ref|XP_656594.1| conserved hypothetical protein [Entamoeba histo...    34  2.1
gb|AAW66880.1| thiol oxidoreductase [Zea mays]                         34  2.1
gb|EAL27339.1| GA11248-PA [Drosophila pseudoobscura]                   34  2.1
gb|EAL02919.1| hypothetical protein CaO19.1630 [Candida albicans...    34  2.7
gb|AAM50251.1| LD19808p [Drosophila melanogaster]                      34  2.7
dbj|BAB79591.1| vitellogenin II [Oryzias latipes]                      34  2.7
ref|NP_620271.1| CDC2-related kinase 7 [Rattus norvegicus] gi|19...    33  3.6
ref|NP_523583.2| CG5813-PA, isoform A [Drosophila melanogaster] ...    33  4.7

>gb|AAL06537.1| AT3g11590/F24K9_26 [Arabidopsis thaliana]
          Length = 622

 Score = 95.9 bits (237), Expect = 6e-19
 Identities = 72/174 (41%), Positives = 90/174 (51%), Gaps = 15/174 (8%)

Query: 15  KIRKRGCSS-TSSSSPFSRR-YRFKRAILMGKKSGYNTPAPMWKTSSKSPS-MATHHHHA 71
           KIRKRGCSS TSS+S   R  YRFKRAI++GK+ G  TP P W+   +SPS  A+   HA
Sbjct: 16  KIRKRGCSSPTSSTSSILREGYRFKRAIVVGKRGGSTTPVPTWRLMGRSPSPRASGALHA 75

Query: 72  MKKTALH-SSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKES----MKSNKER- 125
               + H  S+TG   K      VSARKLAATLWE+N++   R+ +E+     KS KER 
Sbjct: 76  AASPSSHCGSKTG---KVSAPAPVSARKLAATLWEMNEMPSPRVVEEAAPMIRKSRKERI 132

Query: 126 ---DKVERLCRSVLLGPQKLDPLVSPFSERTKGIEVDGCKRNVSDLSHQFHFVD 176
                      S  L P   DP  SP SER +       +R  S    +    D
Sbjct: 133 APLPPPRSSVHSGSLPPHLSDPSHSPVSERMERSGTGSRQRRASSTVQKLRLGD 186


>gb|AAN72254.1| At3g11590/F24K9_26 [Arabidopsis thaliana]
           gi|12322915|gb|AAG51453.1| unknown protein;
           103163-106072 [Arabidopsis thaliana]
           gi|18399293|ref|NP_566392.1| expressed protein
           [Arabidopsis thaliana]
          Length = 622

 Score = 95.9 bits (237), Expect = 6e-19
 Identities = 72/174 (41%), Positives = 90/174 (51%), Gaps = 15/174 (8%)

Query: 15  KIRKRGCSS-TSSSSPFSRR-YRFKRAILMGKKSGYNTPAPMWKTSSKSPS-MATHHHHA 71
           KIRKRGCSS TSS+S   R  YRFKRAI++GK+ G  TP P W+   +SPS  A+   HA
Sbjct: 16  KIRKRGCSSPTSSTSSILREGYRFKRAIVVGKRGGSTTPVPTWRLMGRSPSPRASGALHA 75

Query: 72  MKKTALH-SSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKES----MKSNKER- 125
               + H  S+TG   K      VSARKLAATLWE+N++   R+ +E+     KS KER 
Sbjct: 76  AASPSSHCGSKTG---KVSAPAPVSARKLAATLWEMNEMPSPRVVEEAAPMIRKSRKERI 132

Query: 126 ---DKVERLCRSVLLGPQKLDPLVSPFSERTKGIEVDGCKRNVSDLSHQFHFVD 176
                      S  L P   DP  SP SER +       +R  S    +    D
Sbjct: 133 APLPPPRSSVHSGSLPPHLSDPSHSPVSERMERSGTGSRQRRASSTVQKLRLGD 186


>gb|AAM91355.1| At5g22310/MWD9_9 [Arabidopsis thaliana]
           gi|18420452|ref|NP_568415.1| expressed protein
           [Arabidopsis thaliana] gi|15983779|gb|AAL10486.1|
           AT5g22310/MWD9_9 [Arabidopsis thaliana]
          Length = 481

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 58/160 (36%), Positives = 79/160 (49%), Gaps = 36/160 (22%)

Query: 10  KQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKS-----GYNTPAPMWKTSSKSPSM 64
           ++K  KIRKRG SS+SSSS  +RR RFKRAI  GK++     G  TP     T++K+P +
Sbjct: 4   RKKGCKIRKRGGSSSSSSS-LARRNRFKRAIFAGKRAAQDDGGSGTPVKSI-TAAKTPVL 61

Query: 65  ATHH-------HHAMKKTALHSSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKE 117
            +         HH ++K+                  VSARKLAATLWEIND     +  +
Sbjct: 62  LSFSPENLPIDHHQLQKSC-----------------VSARKLAATLWEINDDADPPVNSD 104

Query: 118 -----SMKSNKERDKVERLCRSVLLGPQKLDPLVSPFSER 152
                S K ++ R K      S+   P+  DP+    SER
Sbjct: 105 KDCLRSKKPSRYRAKKSTEFSSIDFPPRSSDPISRLSSER 144


>dbj|BAB08329.1| unnamed protein product [Arabidopsis thaliana]
          Length = 450

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 57/159 (35%), Positives = 78/159 (48%), Gaps = 36/159 (22%)

Query: 10  KQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKS-----GYNTPAPMWKTSSKSPSM 64
           ++K  KIRKRG SS+SSSS  +RR RFKRAI  GK++     G  TP     T++K+P +
Sbjct: 4   RKKGCKIRKRGGSSSSSSS-LARRNRFKRAIFAGKRAAQDDGGSGTPVKSI-TAAKTPVL 61

Query: 65  ATHH-------HHAMKKTALHSSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKE 117
            +         HH ++K+                  VSARKLAATLWEIND     +  +
Sbjct: 62  LSFSPENLPIDHHQLQKSC-----------------VSARKLAATLWEINDDADPPVNSD 104

Query: 118 -----SMKSNKERDKVERLCRSVLLGPQKLDPLVSPFSE 151
                S K ++ R K      S+   P+  DP+    SE
Sbjct: 105 KDCLRSKKPSRYRAKKSTEFSSIDFPPRSSDPISRLSSE 143


>ref|XP_636178.1| hypothetical protein DDB0188445 [Dictyostelium discoideum]
           gi|60464541|gb|EAL62679.1| hypothetical protein
           DDB0188445 [Dictyostelium discoideum]
          Length = 1197

 Score = 37.0 bits (84), Expect = 0.32
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 4   CQTKHLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPS 63
           C T++L +  N I  R  S+ S          F+   L+ +  GY TP+P  K+SS +P+
Sbjct: 918 CDTQYLVECINYIESRSPSTISQHDLV-----FRVTNLIAELQGYWTPSPKTKSSS-TPN 971

Query: 64  MATHHHH 70
              HHHH
Sbjct: 972 SKLHHHH 978


>ref|NP_572751.1| CG15741-PA [Drosophila melanogaster] gi|7292702|gb|AAF48099.1|
           CG15741-PA [Drosophila melanogaster]
          Length = 135

 Score = 35.8 bits (81), Expect = 0.72
 Identities = 33/118 (27%), Positives = 49/118 (40%), Gaps = 5/118 (4%)

Query: 22  SSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATHHHHAMKKTALHSSR 81
           SSTSS+SP S              S  ++ +P   TS  S S ++    A   T   +  
Sbjct: 17  SSTSSTSPASSTSPASSTSPTSSTSPTSSTSPTSSTSPTSSSSSSSSSTATTTTTTVAPT 76

Query: 82  TGLPFKEKKEISVSARKLAATLWEIN-----DLTPSRIKKESMKSNKERDKVERLCRS 134
           T    +     S S +K+  T   +N     D   ++ KK++ K NK+  KV R  RS
Sbjct: 77  TTTTTEASSSSSSSDKKVRHTRHYVNRRHRKDKKTTKSKKKNSKKNKKTKKVRRTRRS 134


>emb|CAH77277.1| conserved hypothetical protein [Plasmodium chabaudi]
          Length = 303

 Score = 35.4 bits (80), Expect = 0.94
 Identities = 28/122 (22%), Positives = 57/122 (45%), Gaps = 19/122 (15%)

Query: 5   QTKHLKQKHNKIR-KRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPS 63
           +T   +   N+ + K   S  SS +P+  R+RFK++ +  KK+       + KT  K+ +
Sbjct: 2   ETNEFENTDNETKSKENSSDESSDTPYKNRFRFKKSSIQIKKNS------LLKTKIKNAN 55

Query: 64  MATHHHHAMKKTALHSSRTGLPFK-EKKEISVSARKLAATLWEINDLTPSRIKKESMKSN 122
                   ++ T  + S  G P +   K+  +S+++        ND+    ++K+S+K N
Sbjct: 56  --------LEGTTQNDSALGTPVQLNNKDDQISSKENNVI---TNDIPNEELEKDSIKKN 104

Query: 123 KE 124
            +
Sbjct: 105 SQ 106


>ref|XP_464896.1| intracellular protein transport protein USO1-like [Oryza sativa
           (japonica cultivar-group)] gi|47497922|dbj|BAD20128.1|
           intracellular protein transport protein USO1-like [Oryza
           sativa (japonica cultivar-group)]
           gi|47497898|dbj|BAD20082.1| intracellular protein
           transport protein USO1-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 711

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 18  KRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATHHHHAMKKTAL 77
           +RG            R R  RA    +++G  TP+P WK   +   +A      +     
Sbjct: 46  RRGEGDCRGEEEVPLRVRLGRAAR--RRAGPCTPSPSWKLEGEEVEVAAGELAPVHPAVA 103

Query: 78  HSSRTGLPFKEKKEISVSARKLAATLWEINDL 109
            + R+          S SAR+L A+LWEI+D+
Sbjct: 104 PARRSSA------SASASARQLGASLWEIHDV 129


>gb|AAP68906.1| Prion-like-(q/n-rich)-domain-bearing protein protein 64, isoform b
           [Caenorhabditis elegans]
          Length = 662

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 22/58 (37%), Positives = 31/58 (52%), Gaps = 3/58 (5%)

Query: 5   QTKHLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSP 62
           QT+  KQ+HN    R   S+SSSS  S +Y    A+     SG +TP    +TS ++P
Sbjct: 451 QTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETPTNSGSSTPP---QTSVRNP 505


>gb|AAP68905.1| Prion-like-(q/n-rich)-domain-bearing protein protein 64, isoform a
           [Caenorhabditis elegans]
          Length = 760

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 22/58 (37%), Positives = 31/58 (52%), Gaps = 3/58 (5%)

Query: 5   QTKHLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSP 62
           QT+  KQ+HN    R   S+SSSS  S +Y    A+     SG +TP    +TS ++P
Sbjct: 549 QTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETPTNSGSSTPP---QTSVRNP 603


>ref|NP_871824.1| prion-like Q/N-rich domain protein PQN-64, Prion-like Q/N-rich
           domain protein (pqn-64) [Caenorhabditis elegans]
           gi|7507746|pir||T32761 hypothetical protein T12F5.5 -
           Caenorhabditis elegans
          Length = 631

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 22/58 (37%), Positives = 31/58 (52%), Gaps = 3/58 (5%)

Query: 5   QTKHLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSP 62
           QT+  KQ+HN    R   S+SSSS  S +Y    A+     SG +TP    +TS ++P
Sbjct: 451 QTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETPTNSGSSTPP---QTSVRNP 505


>ref|NP_491209.2| prion-like Q/N-rich domain protein PQN-64, Prion-like Q/N-rich
           domain protein (pqn-64) [Caenorhabditis elegans]
          Length = 729

 Score = 34.7 bits (78), Expect = 1.6
 Identities = 22/58 (37%), Positives = 31/58 (52%), Gaps = 3/58 (5%)

Query: 5   QTKHLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSP 62
           QT+  KQ+HN    R   S+SSSS  S +Y    A+     SG +TP    +TS ++P
Sbjct: 549 QTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSPDAVETPTNSGSSTPP---QTSVRNP 603


>ref|XP_656594.1| conserved hypothetical protein [Entamoeba histolytica HM-1:IMSS]
            gi|56473807|gb|EAL51210.1| conserved hypothetical protein
            [Entamoeba histolytica HM-1:IMSS]
          Length = 1738

 Score = 34.3 bits (77), Expect = 2.1
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 21/126 (16%)

Query: 7    KHLKQKHNKIRKRGC--------SSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTS 58
            +HLK+  N  +   C        SST + SP S             KS   TP      S
Sbjct: 1602 QHLKESLNPSKSTNCIISAPPSVSSTPTISPASTP----------SKSKEETPRKHTINS 1651

Query: 59   SKSPSMATHHHHAMKKTALHSSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKES 118
              S S++    H++K++ +   ++    +  K IS S R       EI+DL P  +  E 
Sbjct: 1652 FTSESISETPKHSLKQSKIEKHKS---LRSAKTISFSKRDKKKDKKEIDDLVPETVDGEE 1708

Query: 119  MKSNKE 124
            ++  +E
Sbjct: 1709 VQLERE 1714


>gb|AAW66880.1| thiol oxidoreductase [Zea mays]
          Length = 511

 Score = 34.3 bits (77), Expect = 2.1
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 15/103 (14%)

Query: 80  SRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKESMKSNKERDKVERLCRSVLLGP 139
           S   +PFK       SAR LA  LW  +    +++ +  MK  KE D  +     ++  P
Sbjct: 358 SSVSVPFK-------SARDLALWLWTAH----NKVNERLMKEEKELDNADPSFPKIIWPP 406

Query: 140 QKLDPLVSPFSERTKGIEVDGCKRNVSDLSHQFHFVDPYFRGM 182
           ++L PL    S RT     DG  +   +    F+F+  Y+  M
Sbjct: 407 KQLCPLCYRSSSRT----ADGAMQVEWNEDEVFNFLVNYYGKM 445


>gb|EAL27339.1| GA11248-PA [Drosophila pseudoobscura]
          Length = 1467

 Score = 34.3 bits (77), Expect = 2.1
 Identities = 28/101 (27%), Positives = 45/101 (43%), Gaps = 3/101 (2%)

Query: 24  TSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATHHHHAMKKTALHSSRTG 83
           T+SSS  SR    K+ I + KKS    P P+  T+  SPS  T  +     T   SS+  
Sbjct: 651 TASSSSDSRPTTIKKIIKVSKKSKLVPPTPVTPTT--SPSATTTTNTTATTTPADSSKES 708

Query: 84  LPFKEKKEISVSARKLAATLWEINDLTPSRIKKESMKSNKE 124
            P  + KE S   +     L+ +      +++  +M  +K+
Sbjct: 709 SPVIKSKEKSPEKKPSKGLLYALGQKF-EKLRDSAMSKDKK 748


>gb|EAL02919.1| hypothetical protein CaO19.1630 [Candida albicans SC5314]
           gi|46443510|gb|EAL02791.1| hypothetical protein
           CaO19.9198 [Candida albicans SC5314]
          Length = 732

 Score = 33.9 bits (76), Expect = 2.7
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 8   HLKQKHNKIRKRGCSSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATH 67
           + K     ++KR  S  SSSS  SRR+ F R +   K+     P+P   +SS S +  T 
Sbjct: 570 NFKNLDQLVQKRNDSRASSSSSNSRRFEFIRGL---KEENERVPSPS-SSSSSSSATKTS 625

Query: 68  HHHAMKKTALHSSRTGLPFKEKKEISVSARKLAATLWE 105
            ++  K +    SRT     +++++S +       +WE
Sbjct: 626 QNNFEKSSESAISRT----DDQQDLSSTNTGSEGRMWE 659


>gb|AAM50251.1| LD19808p [Drosophila melanogaster]
          Length = 712

 Score = 33.9 bits (76), Expect = 2.7
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 1/96 (1%)

Query: 23  STSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATHHHHAMKKTALHSSRT 82
           ST SSS  S + RF  A +  ++     P P  K   K   +      +   TA+ ++ T
Sbjct: 615 STGSSSSNSNQQRFPSAPIQPEEGPQPQPKPQLKIKIKQEQLVATRKSSRTATAIVTAAT 674

Query: 83  GLPFKEKKEISVSARKLAATLWE-INDLTPSRIKKE 117
               ++++    + RK+A  L + + +L   +IKK+
Sbjct: 675 ASSHQQQQLRQTTCRKMANKLEDRMGELVKPKIKKK 710


>dbj|BAB79591.1| vitellogenin II [Oryzias latipes]
          Length = 1725

 Score = 33.9 bits (76), Expect = 2.7
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 5    QTKHLKQKHNKIRKRGC-SSTSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPS 63
            + K++  K  KI   G  +ST+SSS  S   R  R+ L    S  ++     KTSS+S S
Sbjct: 1068 EDKNVLLKLKKILTPGLKNSTTSSSSSSSSSRRSRSSLSSATSSLSSSRTSSKTSSRSSS 1127

Query: 64   MATHH------HHAMKKTALHSSRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKE 117
              +             KT+  SS +    ++ K I ++      + W+ +  + SR  + 
Sbjct: 1128 KTSSRSSSKTSSRTSSKTSSSSSSSSSSRRKSKTIDLAEVLNRTSKWQSSSSSSSRSSRP 1187

Query: 118  SMKSNKER 125
            S  S+  R
Sbjct: 1188 SRSSSSVR 1195


>ref|NP_620271.1| CDC2-related kinase 7 [Rattus norvegicus]
           gi|19879558|gb|AAL69525.1| protein kinase for splicing
           component [Rattus norvegicus]
          Length = 1258

 Score = 33.5 bits (75), Expect = 3.6
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 21/149 (14%)

Query: 22  SSTSSSSPFSRRYRFKRAILMGKKSGY--------NTPAPMWKTSSKSPSMATHHHHAMK 73
           SST S SP+SRR R        + S Y         +P+P  +  S SP ++     ++ 
Sbjct: 286 SSTRSPSPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLS---KRSLS 342

Query: 74  KTALHS-----SRTGLPFKEKKEISVSARKLAATLWEINDLTPSRIKKESM----KSNKE 124
           ++ + S     SR+  P   +   S S +K + +    + ++P R+   S      S K+
Sbjct: 343 RSPISSRKSMKSRSRSPAYSRHSSSHSKKKRSGSRSRHSSISPVRLPLNSSLGAELSRKK 402

Query: 125 RDKVERLCRSVLLGPQ-KLDPLVSPFSER 152
           +++      + L G + K  P++ P  E+
Sbjct: 403 KERAAAAAAAKLDGKESKGSPIILPKKEK 431


>ref|NP_523583.2| CG5813-PA, isoform A [Drosophila melanogaster]
           gi|7298300|gb|AAF53530.1| CG5813-PA, isoform A
           [Drosophila melanogaster]
           gi|57015320|sp|Q9NK54|CHIF_DROME Chiffon protein
          Length = 1711

 Score = 33.1 bits (74), Expect = 4.7
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 23  STSSSSPFSRRYRFKRAILMGKKSGYNTPAPMWKTSSKSPSMATHHHHAMKKTALHSSRT 82
           ST SSS  S + RF  A +  ++     P P  K   K   +      +   TA+ ++ T
Sbjct: 615 STGSSSSNSNQQRFPSAPIQPEEGPQPQPKPQLKIKIKQEQLVATRKSSRTATAIVTAAT 674

Query: 83  GLPFKEKKEISVSARKLAATLWE-INDLTPS--RIKKESMKSNKERD 126
               ++++    + RK+A  L + + +L     +IKKE ++  K ++
Sbjct: 675 ASSHQQQQLRQTTCRKMANKLEDRMGELVKPKIKIKKEVIEEQKVKE 721


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.316    0.128    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,028,293
Number of Sequences: 2540612
Number of extensions: 11994049
Number of successful extensions: 36549
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 36505
Number of HSP's gapped (non-prelim): 55
length of query: 199
length of database: 863,360,394
effective HSP length: 121
effective length of query: 78
effective length of database: 555,946,342
effective search space: 43363814676
effective search space used: 43363814676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)


Medicago: description of AC146332.8