BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146331.9 + phase: 0
(75 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP37786.1| At1g51560 [Arabidopsis thaliana] gi|52354014|gb|A... 99 4e-20
gb|AAN15724.1| unknown protein [Arabidopsis thaliana] gi|2026031... 94 7e-19
dbj|BAB01452.1| ABC transporter-like protein [Arabidopsis thaliana] 94 7e-19
ref|NP_188746.2| ABC transporter family protein [Arabidopsis tha... 94 7e-19
ref|NP_175557.1| ABC transporter family protein [Arabidopsis tha... 93 2e-18
dbj|BAC43047.1| putative ATP-dependent transmembrane transporter... 91 6e-18
gb|AAV59325.1| putative ATP-dependent transmembrane transporter ... 73 2e-12
gb|AAN12898.1| putative ABC transporter protein [Arabidopsis tha... 72 4e-12
pir||E86313 hypothetical protein F2H15.7 - Arabidopsis thaliana ... 72 4e-12
gb|AAP80385.1| ABC transporter [Gossypium hirsutum] 72 5e-12
emb|CAD41191.1| OSJNBa0074L08.3 [Oryza sativa (japonica cultivar... 69 3e-11
gb|AAP54419.1| putative ABC transporter [Oryza sativa (japonica ... 68 7e-11
ref|XP_450985.1| putative ABC transporter [Oryza sativa (japonic... 67 1e-10
ref|XP_450138.1| ABC transporter-like protein [Oryza sativa (jap... 65 5e-10
ref|XP_450986.1| putative ABC transporter [Oryza sativa (japonic... 64 8e-10
gb|AAM45334.2| similar to Dictyostelium discoideum (Slime mold).... 61 7e-09
gb|AAK69777.1| ABC transporter mdrA2 [Dictyostelium discoideum] 61 7e-09
ref|XP_477523.1| ABC transporter family protein-like [Oryza sati... 61 8e-09
ref|XP_477522.1| putative ABC transporter family protein [Oryza ... 61 8e-09
gb|EAL85604.1| ABC drug exporter AtrF [Aspergillus fumigatus Af293] 60 1e-08
>gb|AAP37786.1| At1g51560 [Arabidopsis thaliana] gi|52354014|gb|AAU44368.1| ABC
transporter CER5 [Arabidopsis thaliana]
gi|20260526|gb|AAM13161.1| ATP-dependent transmembrane
transporter, putative [Arabidopsis thaliana]
gi|15217942|ref|NP_175561.1| ABC transporter family
protein [Arabidopsis thaliana]
gi|15724278|gb|AAL06532.1| At1g51500/F5D21_6
[Arabidopsis thaliana] gi|12325360|gb|AAG52619.1|
ATP-dependent transmembrane transporter, putative;
39775-42780 [Arabidopsis thaliana]
gi|25297510|pir||D96553 hypothetical protein F5D21.6
[imported] - Arabidopsis thaliana
Length = 687
Score = 98.6 bits (244), Expect = 4e-20
Identities = 48/63 (76%), Positives = 54/63 (85%)
Query: 2 EIGYLMVLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
EIG LAWED+ V++PNF GPT+RLL+GLNG AEPGRIMAIMGPSGSGKSTLLD+LA
Sbjct: 17 EIGRGAYLAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLA 76
Query: 62 GSL 64
G L
Sbjct: 77 GRL 79
>gb|AAN15724.1| unknown protein [Arabidopsis thaliana] gi|20260310|gb|AAM13053.1|
unknown protein [Arabidopsis thaliana]
Length = 691
Score = 94.4 bits (233), Expect = 7e-19
Identities = 44/56 (78%), Positives = 50/56 (88%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
LAWED+ V++PNF GPT+RLL LNG+AEPGRIMAIMGPSGSGKSTLLD+LAG L
Sbjct: 25 LAWEDLTVVIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRL 80
>dbj|BAB01452.1| ABC transporter-like protein [Arabidopsis thaliana]
Length = 594
Score = 94.4 bits (233), Expect = 7e-19
Identities = 44/56 (78%), Positives = 50/56 (88%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
LAWED+ V++PNF GPT+RLL LNG+AEPGRIMAIMGPSGSGKSTLLD+LAG L
Sbjct: 25 LAWEDLTVVIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRL 80
>ref|NP_188746.2| ABC transporter family protein [Arabidopsis thaliana]
Length = 691
Score = 94.4 bits (233), Expect = 7e-19
Identities = 44/56 (78%), Positives = 50/56 (88%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
LAWED+ V++PNF GPT+RLL LNG+AEPGRIMAIMGPSGSGKSTLLD+LAG L
Sbjct: 25 LAWEDLTVVIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRL 80
>ref|NP_175557.1| ABC transporter family protein [Arabidopsis thaliana]
gi|12325372|gb|AAG52631.1| ATP-dependent transmembrane
transporter, putative; 59412-63615 [Arabidopsis
thaliana] gi|25297509|pir||H96552 hypothetical protein
F5D21.8 [imported] - Arabidopsis thaliana
Length = 678
Score = 92.8 bits (229), Expect = 2e-18
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 7 MVLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
M +AWED+ V++PNFG+G TKRLLNG+NG EP RI+AIMGPSGSGKSTLLD LAG L
Sbjct: 8 MYVAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRL 65
>dbj|BAC43047.1| putative ATP-dependent transmembrane transporter [Arabidopsis
thaliana]
Length = 678
Score = 91.3 bits (225), Expect = 6e-18
Identities = 42/58 (72%), Positives = 50/58 (85%)
Query: 7 MVLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
M +AW+D+ V++PNFG+G TKRLLNG+NG EP RI+AIMGPSGSGKSTLLD LAG L
Sbjct: 8 MYVAWKDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRL 65
>gb|AAV59325.1| putative ATP-dependent transmembrane transporter [Oryza sativa
(japonica cultivar-group)] gi|50933341|ref|XP_476198.1|
putative ATP-dependent transmembrane transporter [Oryza
sativa (japonica cultivar-group)]
gi|46981314|gb|AAT07632.1| putative ATP-dependent
transmembrane transporter [Oryza sativa (japonica
cultivar-group)] gi|46981246|gb|AAT07564.1| putative
ATP-dependent transmembrane transporter [Oryza sativa
(japonica cultivar-group)]
Length = 700
Score = 72.8 bits (177), Expect = 2e-12
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
L WE++ +LP G TK+L+ GL G+A PGR++AIMGPSGSGKSTLLD L+G L
Sbjct: 38 LTWENLTAVLPGGGGRATKKLVQGLYGYAVPGRVVAIMGPSGSGKSTLLDALSGRL 93
>gb|AAN12898.1| putative ABC transporter protein [Arabidopsis thaliana]
gi|19423992|gb|AAL87274.1| putative ABC transporter
protein [Arabidopsis thaliana]
gi|22329638|ref|NP_173226.2| ABC transporter family
protein [Arabidopsis thaliana]
Length = 703
Score = 72.0 bits (175), Expect = 4e-12
Identities = 34/63 (53%), Positives = 45/63 (70%), Gaps = 1/63 (1%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSLKVTS 68
L W+D+ VM+ G G T+ +L GL G+AEPG + A+MGPSGSGKST+LD LA L +
Sbjct: 50 LTWQDLTVMV-TMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANA 108
Query: 69 FLN 71
FL+
Sbjct: 109 FLS 111
>pir||E86313 hypothetical protein F2H15.7 - Arabidopsis thaliana
gi|9665062|gb|AAF97264.1| Contains similarity to ATP
dependent transmembrane transporter protein (wh3) from
Bombyx mori gb|AF229609 and contains an ABC transporter
PF|00005 domain. ESTs gb|Z18062, gb|AI999375,
gb|N96732, gb|F14058, gb|AV528782, gb|AV559526,
gb|AV556190, gb|AV562800, gb|AV559560, gb|AV523165,
gb|AV565094, gb|AV566285 come from this gene.
[Arabidopsis thaliana]
Length = 659
Score = 72.0 bits (175), Expect = 4e-12
Identities = 34/63 (53%), Positives = 45/63 (70%), Gaps = 1/63 (1%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSLKVTS 68
L W+D+ VM+ G G T+ +L GL G+AEPG + A+MGPSGSGKST+LD LA L +
Sbjct: 50 LTWQDLTVMV-TMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANA 108
Query: 69 FLN 71
FL+
Sbjct: 109 FLS 111
>gb|AAP80385.1| ABC transporter [Gossypium hirsutum]
Length = 705
Score = 71.6 bits (174), Expect = 5e-12
Identities = 34/63 (53%), Positives = 45/63 (70%), Gaps = 1/63 (1%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSLKVTS 68
L WED+ VM+ G T+++L GL G+AEPG + A+MGPSGSGKSTLLD L+ L +
Sbjct: 52 LTWEDLTVMV-TLSNGATQKVLEGLTGYAEPGTLTALMGPSGSGKSTLLDALSSRLAANA 110
Query: 69 FLN 71
FL+
Sbjct: 111 FLS 113
>emb|CAD41191.1| OSJNBa0074L08.3 [Oryza sativa (japonica cultivar-group)]
gi|50926616|ref|XP_473255.1| OSJNBa0074L08.3 [Oryza
sativa (japonica cultivar-group)]
Length = 692
Score = 68.9 bits (167), Expect = 3e-11
Identities = 34/63 (53%), Positives = 45/63 (70%), Gaps = 1/63 (1%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSLKVTS 68
L W+D+ V + G G T+ +L+ L G+AEPG + A+MGPSGSGKSTLLD LAG L +
Sbjct: 48 LTWKDLSVTVA-LGPGKTQTVLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAANA 106
Query: 69 FLN 71
FL+
Sbjct: 107 FLS 109
>gb|AAP54419.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|37535660|ref|NP_922132.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
gi|22128707|gb|AAM92819.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 723
Score = 67.8 bits (164), Expect = 7e-11
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 9 LAWEDVRVMLP------NFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAG 62
LAW D+ V + G G T+ +L GL G AEPG I A+MGPSGSGKSTLLD LAG
Sbjct: 64 LAWRDLTVTVVLGGGGGGGGGGTTQDVLQGLTGHAEPGTITALMGPSGSGKSTLLDALAG 123
Query: 63 SLKVTSFLN 71
L +FL+
Sbjct: 124 RLAANAFLD 132
>ref|XP_450985.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|47848378|dbj|BAD22237.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 721
Score = 67.0 bits (162), Expect = 1e-10
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 7 MVLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
+VLAWED+ V GK +L GLNG+A PG ++AIMGPSG GKSTLLD LAG L
Sbjct: 98 VVLAWEDLWVSAAG-GKSGRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDALAGRL 154
>ref|XP_450138.1| ABC transporter-like protein [Oryza sativa (japonica
cultivar-group)] gi|47848592|dbj|BAD22442.1| ABC
transporter-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 525
Score = 65.1 bits (157), Expect = 5e-10
Identities = 33/56 (58%), Positives = 40/56 (70%), Gaps = 1/56 (1%)
Query: 9 LAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
L WEDV V + G G +LNG++G A PG ++AIMGPSG GK+TLLDTLAG L
Sbjct: 93 LTWEDVWVTAVDSG-GKAATILNGVSGSARPGEVLAIMGPSGCGKTTLLDTLAGRL 147
>ref|XP_450986.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|47848379|dbj|BAD22238.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 728
Score = 64.3 bits (155), Expect = 8e-10
Identities = 34/57 (59%), Positives = 40/57 (69%), Gaps = 1/57 (1%)
Query: 8 VLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSL 64
VLAWED+ V G +L GLNG+A PG ++AIMGPSG GKSTLLD+LAG L
Sbjct: 104 VLAWEDLWVSTAG-GSRRRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDSLAGRL 159
>gb|AAM45334.2| similar to Dictyostelium discoideum (Slime mold). ABC transporter
mdrA2 gi|19550691|gb|AAL91487.1| ABC transporter AbcG18
[Dictyostelium discoideum] gi|66819687|ref|XP_643502.1|
ABC transporter G family protein [Dictyostelium
discoideum] gi|60471638|gb|EAL69594.1| ABC transporter G
family protein [Dictyostelium discoideum]
Length = 1476
Score = 61.2 bits (147), Expect = 7e-09
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 9 LAWEDV--RVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
+ W+D+ V + GK RLLNG+NG+ +PG ++A+MGPSG+GKSTLLD LA
Sbjct: 808 MQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLLDVLA 862
Score = 37.0 bits (84), Expect = 0.13
Identities = 15/35 (42%), Positives = 26/35 (73%)
Query: 27 KRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
K++L LN F +PG ++ ++G G GK++L++TLA
Sbjct: 85 KKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>gb|AAK69777.1| ABC transporter mdrA2 [Dictyostelium discoideum]
Length = 1476
Score = 61.2 bits (147), Expect = 7e-09
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 9 LAWEDV--RVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
+ W+D+ V + GK RLLNG+NG+ +PG ++A+MGPSG+GKSTLLD LA
Sbjct: 808 MQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLLDVLA 862
Score = 37.0 bits (84), Expect = 0.13
Identities = 15/35 (42%), Positives = 26/35 (73%)
Query: 27 KRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
K++L LN F +PG ++ ++G G GK++L++TLA
Sbjct: 85 KKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>ref|XP_477523.1| ABC transporter family protein-like [Oryza sativa (japonica
cultivar-group)] gi|33147054|dbj|BAC79957.1| ABC
transporter family protein-like [Oryza sativa (japonica
cultivar-group)] gi|34395341|dbj|BAC84400.1| ABC
transporter family protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 362
Score = 60.8 bits (146), Expect = 8e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 9 LAWEDVRVMLPNF-----GKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGS 63
L W+D+ V P G G +L+GL+G+A PG ++A+MGPSG GK+TLLD LAG
Sbjct: 120 LTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDALAGR 179
Query: 64 L 64
L
Sbjct: 180 L 180
>ref|XP_477522.1| putative ABC transporter family protein [Oryza sativa (japonica
cultivar-group)] gi|33147053|dbj|BAC79956.1| putative
ABC transporter family protein [Oryza sativa (japonica
cultivar-group)] gi|34395340|dbj|BAC84399.1| putative
ABC transporter family protein [Oryza sativa (japonica
cultivar-group)]
Length = 729
Score = 60.8 bits (146), Expect = 8e-09
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 5/61 (8%)
Query: 9 LAWEDVRVMLPNF-----GKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGS 63
L W+D+ V P G G +L+GL+G+A PG ++A+MGPSG GK+TLLD LAG
Sbjct: 120 LTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDALAGR 179
Query: 64 L 64
L
Sbjct: 180 L 180
>gb|EAL85604.1| ABC drug exporter AtrF [Aspergillus fumigatus Af293]
Length = 1547
Score = 60.5 bits (145), Expect = 1e-08
Identities = 29/59 (49%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 8 VLAWEDVRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGSLKV 66
+ W +V +P +G G T++LLNG+NG+A+PG ++A+MG SG+GK+TLL+TLA K+
Sbjct: 891 IFTWSNVEYTVP-YGNG-TRKLLNGVNGYAKPGVMIALMGASGAGKTTLLNTLAQRQKM 947
Score = 34.3 bits (77), Expect = 0.85
Identities = 18/42 (42%), Positives = 24/42 (56%), Gaps = 1/42 (2%)
Query: 21 FGKGPTKR-LLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLA 61
FGK P R LL+ G G +M ++G G+G ST L T+A
Sbjct: 202 FGKQPPVRELLHDFTGLVREGEMMLVLGRPGAGCSTFLKTIA 243
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.140 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,435,542
Number of Sequences: 2540612
Number of extensions: 4504480
Number of successful extensions: 54330
Number of sequences better than 10.0: 11289
Number of HSP's better than 10.0 without gapping: 10757
Number of HSP's successfully gapped in prelim test: 532
Number of HSP's that attempted gapping in prelim test: 41781
Number of HSP's gapped (non-prelim): 13089
length of query: 75
length of database: 863,360,394
effective HSP length: 51
effective length of query: 24
effective length of database: 733,789,182
effective search space: 17610940368
effective search space used: 17610940368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146331.9