BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146331.8 + phase: 2 /pseudo
(279 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN60225.1| unknown [Arabidopsis thaliana] 277 3e-73
gb|AAP06824.1| unknown protein [Arabidopsis thaliana] gi|2982442... 276 5e-73
gb|AAM67353.1| unknown [Arabidopsis thaliana] 201 2e-50
gb|AAD10641.1| Hypothetical protein [Arabidopsis thaliana] gi|25... 69 2e-10
gb|AAL96729.2| hypothetical protein [Dictyostelium discoideum] g... 38 0.28
gb|EAL25632.1| GA20777-PA [Drosophila pseudoobscura] 38 0.36
pir||S54262 methyl-accepting chemotaxis protein A - Rhodobacter ... 36 1.4
emb|CAB87131.1| methyl accepting chemotaxis protein [Rhodobacter... 36 1.4
gb|AAD43772.1| protocadherin gamma A5 short form protein [Homo s... 35 2.4
gb|AAD43719.1| protocadherin gamma A5 [Homo sapiens] gi|37999838... 35 2.4
gb|AAP11321.1| hypothetical Membrane Associated Protein [Bacillu... 35 2.4
ref|XP_574131.1| PREDICTED: similar to protocadherin gamma A3 [R... 35 2.4
ref|NP_727928.3| CG32580-PA [Drosophila melanogaster] gi|5538040... 35 2.4
dbj|BAB58816.1| serine-threoinine rich antigen [Staphylococcus a... 35 2.4
sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma A5 precursor (PCDH-gam... 35 2.4
ref|XP_394435.2| PREDICTED: similar to ENSANGP00000021149 [Apis ... 35 2.4
gb|AAT77596.1| protocadherin gamma a3 [Rattus norvegicus] 35 2.4
ref|YP_085737.1| hypothetical protein BCZK4158 [Bacillus cereus ... 35 3.1
gb|EAL85618.1| conserved hypothetical protein [Aspergillus fumig... 34 4.0
ref|ZP_00237425.1| membrane protein [Bacillus cereus G9241] gi|4... 34 4.0
>gb|AAN60225.1| unknown [Arabidopsis thaliana]
Length = 321
Score = 277 bits (708), Expect = 3e-73
Identities = 144/281 (51%), Positives = 198/281 (70%), Gaps = 6/281 (2%)
Query: 2 SENG-LKESVNYQVISLKDLAKSVLSEAGWSNFLCKGKKFQDPLDLALLFVGGELQSSDL 60
S NG L E+VNYQV+S KDL SV ++ GWSNFLC KK + P+D+AL+F+G EL SSD+
Sbjct: 42 SANGELDEAVNYQVMSAKDLVGSVFTQGGWSNFLCSEKKLEQPVDVALVFIGRELLSSDV 101
Query: 61 SLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSGFAEACGDDLGIGNVA 120
S +++D AL L + F SN S+AFPY++A E+ +E+ L+SG EAC +++G+ N+
Sbjct: 102 SSKRNSDPALVNTLNNLFTASNFSLAFPYIAAPEEERMENLLLSGLKEACPNNVGVSNIV 161
Query: 121 FLGSCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCN-GPQASKNVDSTKSEG 179
F SC + +G ++ + LQS + +L R+E +G+TDLVV C+ G +++ + SE
Sbjct: 162 FSDSCFVEDGTIQKLSDLQSFKDHLLARRETRKEGETDLVVLCSEGSESNSQAGQSHSER 221
Query: 180 EVLSELISSVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTN-STACDGV 238
E + EL+SSVE+SG+KY LYVSD Y SY+ LQRFLAE+ GN + +T CD +
Sbjct: 222 ESILELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDEL 278
Query: 239 CQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQ 279
C+ KSSLLEG+LVGIV L+ILISGLCCM GID+PTRFE PQ
Sbjct: 279 CKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQ 319
>gb|AAP06824.1| unknown protein [Arabidopsis thaliana] gi|29824423|gb|AAP04171.1|
unknown protein [Arabidopsis thaliana]
gi|16323424|gb|AAL15206.1| unknown protein [Arabidopsis
thaliana] gi|14334708|gb|AAK59532.1| unknown protein
[Arabidopsis thaliana] gi|30682651|ref|NP_566456.3|
expressed protein [Arabidopsis thaliana]
Length = 321
Score = 276 bits (706), Expect = 5e-73
Identities = 144/281 (51%), Positives = 197/281 (69%), Gaps = 6/281 (2%)
Query: 2 SENG-LKESVNYQVISLKDLAKSVLSEAGWSNFLCKGKKFQDPLDLALLFVGGELQSSDL 60
S NG L E+VNYQV+S KDL SV ++ GWSNFLC KK + P+D+AL+F+G EL SSD+
Sbjct: 42 SANGELDEAVNYQVMSAKDLVGSVFTQGGWSNFLCSEKKLEQPVDVALVFIGRELLSSDV 101
Query: 61 SLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSGFAEACGDDLGIGNVA 120
S +++D AL L + F SN S+AFPY++A E+ +E+ L+SG EAC +++G+ N+
Sbjct: 102 SSKRNSDPALVNTLNNLFTASNFSLAFPYIAAPEEERMENLLLSGLKEACPNNVGVSNIV 161
Query: 121 FLGSCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCN-GPQASKNVDSTKSEG 179
F SC + +G ++ + LQS + +L R+E +G+TDLVV C+ G +++ + SE
Sbjct: 162 FSDSCFVEDGTIQKLSDLQSFKDHLLARRETRKEGETDLVVLCSEGSESNSQAGQSHSER 221
Query: 180 EVLSELISSVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTN-STACDGV 238
E EL+SSVE+SG+KY LYVSD Y SY+ LQRFLAE+ GN + +T CD +
Sbjct: 222 ESFLELVSSVEQSGSKYTALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDEL 278
Query: 239 CQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQ 279
C+ KSSLLEG+LVGIV L+ILISGLCCM GID+PTRFE PQ
Sbjct: 279 CKFKSSLLEGILVGIVFLLILISGLCCMAGIDTPTRFETPQ 319
>gb|AAM67353.1| unknown [Arabidopsis thaliana]
Length = 203
Score = 201 bits (511), Expect = 2e-50
Identities = 103/204 (50%), Positives = 144/204 (70%), Gaps = 5/204 (2%)
Query: 78 FVRSNTSMAFPYVSASEDVNLEDSLVSGFAEACGDDLGIGNVAFLGSCSMGNGNREETAA 137
F SN S+AFPY++A E+ +E+ L+SG EAC +++G+ N+ F SC + +G ++ +
Sbjct: 1 FTASNFSLAFPYIAAPEEERMENLLLSGLKEACPNNVGVSNIVFSDSCFVEDGTIQKLSD 60
Query: 138 LQSVQAYLTKRKEESHKGKTDLVVFCN-GPQASKNVDSTKSEGEVLSELISSVEESGAKY 196
LQS + +L R+E +G+TDLVV C+ G +++ ++SE E + EL+SSVE+SG+KY
Sbjct: 61 LQSFKDHLLARRETRKEGETDLVVLCSEGSESNSQSGQSRSERESILELVSSVEQSGSKY 120
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTN-STACDGVCQLKSSLLEGLLVGIVL 255
LYVSD Y SY+ LQRFLAE+ GN + +T CD +C+ KSSLLEG+LVGIV
Sbjct: 121 TALYVSD---PYWYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLLEGILVGIVF 177
Query: 256 LIILISGLCCMMGIDSPTRFEAPQ 279
L+ILISGLCCM GID+PTRFE PQ
Sbjct: 178 LLILISGLCCMAGIDTPTRFETPQ 201
>gb|AAD10641.1| Hypothetical protein [Arabidopsis thaliana]
gi|25405838|pir||A96598 hypothetical protein T5A14.4
[imported] - Arabidopsis thaliana
Length = 76
Score = 68.6 bits (166), Expect = 2e-10
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 15 ISLKDLAKSVLSEAGWSNFLCKGKKFQDPLDLALLFVGGELQSSDLSLNKHADSALSYLL 74
+S KDL SV + GWSNFLC KK Q P+D+AL+F+G EL SSD+S N+++D L L
Sbjct: 1 MSAKDLVDSVFTLGGWSNFLCSEKKLQQPVDVALVFIGRELLSSDVSSNQNSDPVLVNTL 60
Query: 75 K 75
K
Sbjct: 61 K 61
>gb|AAL96729.2| hypothetical protein [Dictyostelium discoideum]
gi|66822493|ref|XP_644601.1| hypothetical protein
DDB0217155 [Dictyostelium discoideum]
gi|66822591|ref|XP_644650.1| hypothetical protein
DDB0217183 [Dictyostelium discoideum]
gi|60472773|gb|EAL70723.1| hypothetical protein
DDB0217183 [Dictyostelium discoideum]
gi|60472746|gb|EAL70696.1| hypothetical protein
DDB0217155 [Dictyostelium discoideum]
Length = 295
Score = 38.1 bits (87), Expect = 0.28
Identities = 20/61 (32%), Positives = 35/61 (56%), Gaps = 4/61 (6%)
Query: 223 STTGNGSTNSTACDGVCQ----LKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAP 278
S G+GS++S + + Q + +L L+ +LL IL +G+CC+ + P R+EAP
Sbjct: 231 SQQGSGSSSSGSNEPTKQHFTYVTGPVLSAYLIISILLAILFTGICCISDLQVPDRYEAP 290
Query: 279 Q 279
+
Sbjct: 291 K 291
>gb|EAL25632.1| GA20777-PA [Drosophila pseudoobscura]
Length = 383
Score = 37.7 bits (86), Expect = 0.36
Identities = 17/44 (38%), Positives = 30/44 (67%)
Query: 236 DGVCQLKSSLLEGLLVGIVLLIILISGLCCMMGIDSPTRFEAPQ 279
D V + ++L GL+V ++LL+I+ G+C MM I++ RF+ P+
Sbjct: 329 DCVGFVSPAILMGLMVVVILLVIIFIGICWMMDINTMDRFDDPK 372
>pir||S54262 methyl-accepting chemotaxis protein A - Rhodobacter sphaeroides
Length = 691
Score = 35.8 bits (81), Expect = 1.4
Identities = 27/102 (26%), Positives = 46/102 (44%), Gaps = 2/102 (1%)
Query: 128 GNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKSEGEVLSELIS 187
G+ R V+A L +R E+ + TDL++ +G Q + VD G+ L +++S
Sbjct: 530 GDAGRGFAVVASEVRA-LAQRSSEAAREITDLILK-SGNQVRRGVDLVGKTGDALKQIVS 587
Query: 188 SVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAESTTGNGS 229
SV E + + VS +S+ L +ST N +
Sbjct: 588 SVSEISTLVSDIAVSSRQQSVSLAEINCAVNNLDQSTQQNAA 629
>emb|CAB87131.1| methyl accepting chemotaxis protein [Rhodobacter sphaeroides]
Length = 792
Score = 35.8 bits (81), Expect = 1.4
Identities = 27/102 (26%), Positives = 46/102 (44%), Gaps = 2/102 (1%)
Query: 128 GNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKSEGEVLSELIS 187
G+ R V+A L +R E+ + TDL++ +G Q + VD G+ L +++S
Sbjct: 631 GDAGRGFAVVASEVRA-LAQRSSEAAREITDLILK-SGNQVRRGVDLVGKTGDALKQIVS 688
Query: 188 SVEESGAKYAVLYVSDISRSIQYPSYRDLQRFLAESTTGNGS 229
SV E + + VS +S+ L +ST N +
Sbjct: 689 SVSEISTLVSDIAVSSRQQSVSLAEINCAVNNLDQSTQQNAA 730
>gb|AAD43772.1| protocadherin gamma A5 short form protein [Homo sapiens]
gi|14196471|ref|NP_114443.1| protocadherin gamma
subfamily A, 5 isoform 2 precursor [Homo sapiens]
Length = 813
Score = 35.0 bits (79), Expect = 2.4
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 143 AYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKS------EGEVLSELISSVEESGAKY 196
+Y T E + +G + V + P + N T S +G LS +S ++G Y
Sbjct: 456 SYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLY 515
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTNS 232
A+ RS Y RDLQ ++ S +GN +S
Sbjct: 516 AL-------RSFDYEQLRDLQLWVTASDSGNPPLSS 544
>gb|AAD43719.1| protocadherin gamma A5 [Homo sapiens]
gi|37999838|sp|Q9Y5G8|PCDG5_HUMAN Protocadherin gamma A5
precursor (PCDH-gamma-A5) gi|11056024|ref|NP_061741.1|
protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 35.0 bits (79), Expect = 2.4
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 143 AYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKS------EGEVLSELISSVEESGAKY 196
+Y T E + +G + V + P + N T S +G LS +S ++G Y
Sbjct: 456 SYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLY 515
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTNS 232
A+ RS Y RDLQ ++ S +GN +S
Sbjct: 516 AL-------RSFDYEQLRDLQLWVTASDSGNPPLSS 544
>gb|AAP11321.1| hypothetical Membrane Associated Protein [Bacillus cereus ATCC
14579] gi|30022489|ref|NP_834120.1| hypothetical
Membrane Associated Protein [Bacillus cereus ATCC 14579]
Length = 215
Score = 35.0 bits (79), Expect = 2.4
Identities = 21/61 (34%), Positives = 33/61 (53%), Gaps = 1/61 (1%)
Query: 17 LKDLAKSVLSEAGWSNFLCKGKKFQDPLDLAL-LFVGGELQSSDLSLNKHADSALSYLLK 75
++D+ ++L +G + K K QD L L L + GE+QSS L + +H D L LK
Sbjct: 129 IRDVEYAILEPSGKLSVFQKQKNKQDTLQFTLPLIIDGEIQSSHLQMIEHTDEWLIEKLK 188
Query: 76 D 76
+
Sbjct: 189 N 189
>ref|XP_574131.1| PREDICTED: similar to protocadherin gamma A3 [Rattus norvegicus]
Length = 810
Score = 35.0 bits (79), Expect = 2.4
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 143 AYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKS------EGEVLSELISSVEESGAKY 196
+YL E + +G + V P KN T S +G LS +S +G Y
Sbjct: 453 SYLAYIPENNARGASIFSVTAQDPDTDKNAQITYSLAEDTLQGVPLSSFVSINSNTGVLY 512
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNG--STNST 233
A+ S Y +RDLQ + +GN S+NST
Sbjct: 513 ALC-------SFDYEQFRDLQLHITARDSGNPPLSSNST 544
>ref|NP_727928.3| CG32580-PA [Drosophila melanogaster] gi|55380402|gb|AAN09382.3|
CG32580-PA [Drosophila melanogaster]
Length = 16223
Score = 35.0 bits (79), Expect = 2.4
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 88 PYVSASEDVNLEDSLVSGFAEACGDDLGIGNVAFLGSCSMGNGNRE--ETAALQSVQAYL 145
P++S ++ E S G C L IG + + C++ E ++ S+ YL
Sbjct: 10452 PFLSTISNIKFEQSSFHGCDCTC--QLEIGKDSCICECNLKESTSERLKSVTASSLYIYL 10509
Query: 146 TKRKEESHKGKTDLVVFCNGPQASKNVDSTKSEGEVLSELISSVEESGAK 195
+ +H TDL N + + +KS ++ +E ISS +ES AK
Sbjct: 10510 PQSSTTAHSLLTDLSAE-NQTNQEETSELSKSLPQLTTEEISSFQESSAK 10558
>dbj|BAB58816.1| serine-threoinine rich antigen [Staphylococcus aureus subsp. aureus
Mu50] gi|15928240|ref|NP_375773.1| hypothetical protein
SA2447 [Staphylococcus aureus subsp. aureus N315]
gi|13702612|dbj|BAB43752.1| SA2447 [Staphylococcus aureus
subsp. aureus N315] gi|25507441|pir||F90073 hypothetical
protein SA2447 [imported] - Staphylococcus aureus (strain
N315) gi|15925644|ref|NP_373178.1| serine-threoinine rich
antigen [Staphylococcus aureus subsp. aureus Mu50]
Length = 2271
Score = 35.0 bits (79), Expect = 2.4
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 12/194 (6%)
Query: 57 SSDLSLNKHADSALSYLLKDSFVRSNTSMAFPYVSASEDVNLEDSLVSGFAEACGDDLGI 116
+S S+++ A ++ S + S S ++ S S+ +L S +E+ I
Sbjct: 1120 ASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDSI 1179
Query: 117 GNVAFLG---SCSMGNGNREETAALQSVQAYLTKRKEESHKGKTDLVVFCNGPQASKNVD 173
S S+ N + QS A+L++ ES T V + +++ D
Sbjct: 1180 SEAISASESTSISLSESNSTSDSESQSASAFLSESLSESTSESTSESVSSSTSESTSLSD 1239
Query: 174 STKSEGEVLSELISSVEESGAKYAVLYVSD---------ISRSIQYPSYRDLQRFLAEST 224
ST G + L +S S + +S+ +S S+ + L + ST
Sbjct: 1240 STSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSESVSTSLSMSTSTSLSNSTSLST 1299
Query: 225 TGNGSTNSTACDGV 238
+ + ST+ + D +
Sbjct: 1300 SLSDSTSDSKSDSL 1313
>sp|Q5DRB5|PCDG5_PANTR Protocadherin gamma A5 precursor (PCDH-gamma-A5)
gi|46982123|gb|AAT08109.1| protocadherin gamma a5 [Pan
troglodytes]
Length = 931
Score = 35.0 bits (79), Expect = 2.4
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 143 AYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKS------EGEVLSELISSVEESGAKY 196
+Y T E + +G + V + P + N T S +G LS +S ++G Y
Sbjct: 456 SYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLY 515
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNGSTNS 232
A+ RS Y RDLQ ++ S +GN +S
Sbjct: 516 AL-------RSFDYEQLRDLQLWVTASDSGNPPLSS 544
>ref|XP_394435.2| PREDICTED: similar to ENSANGP00000021149 [Apis mellifera]
Length = 796
Score = 35.0 bits (79), Expect = 2.4
Identities = 33/102 (32%), Positives = 48/102 (46%), Gaps = 11/102 (10%)
Query: 152 SHKGKTDLVVFCNGPQASKNVDSTKSEGEVLSELISSVEES--GAKYAVLYVSDISRSIQ 209
S +GK + V K T+SEG+ L E +++ +S Y + +SD R
Sbjct: 328 SRQGKINFVDLAGSEMTKK----TQSEGKTLEEA-NNINKSLMVLGYCIASLSDGKRKGG 382
Query: 210 YPSYRD--LQRFLAESTTGNGSTNSTACDGVCQLKSSLLEGL 249
+ YRD L + LA+S GNG T AC + KS+ E L
Sbjct: 383 HIPYRDSKLTKLLADSLAGNGVTLMIAC--ISPAKSNASETL 422
>gb|AAT77596.1| protocadherin gamma a3 [Rattus norvegicus]
Length = 929
Score = 35.0 bits (79), Expect = 2.4
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 143 AYLTKRKEESHKGKTDLVVFCNGPQASKNVDSTKS------EGEVLSELISSVEESGAKY 196
+YL E + +G + V P KN T S +G LS +S +G Y
Sbjct: 453 SYLAYIPENNARGASIFSVTAQDPDTDKNAQITYSLAEDTLQGVPLSSFVSINSNTGVLY 512
Query: 197 AVLYVSDISRSIQYPSYRDLQRFLAESTTGNG--STNST 233
A+ S Y +RDLQ + +GN S+NST
Sbjct: 513 ALC-------SFDYEQFRDLQLHITARDSGNPPLSSNST 544
>ref|YP_085737.1| hypothetical protein BCZK4158 [Bacillus cereus E33L]
gi|51974561|gb|AAU16111.1| conserved hypothetical
protein [Bacillus cereus E33L]
Length = 215
Score = 34.7 bits (78), Expect = 3.1
Identities = 22/72 (30%), Positives = 36/72 (49%), Gaps = 1/72 (1%)
Query: 17 LKDLAKSVLSEAGWSNFLCKGKKFQDPLDLAL-LFVGGELQSSDLSLNKHADSALSYLLK 75
++D+ ++L +G + K K QD L L L + GE+QSS L + +H D L LK
Sbjct: 129 IRDVEYAILEPSGKLSVFQKQKGGQDALQFTLPLIIDGEIQSSHLQMIEHTDEWLIGKLK 188
Query: 76 DSFVRSNTSMAF 87
+ T + +
Sbjct: 189 NLGYNDTTQILY 200
>gb|EAL85618.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
Length = 386
Score = 34.3 bits (77), Expect = 4.0
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 26/151 (17%)
Query: 27 EAGWSNFLCKGKKFQDPLDLALLFVGGELQSSDLSLNKHADSALSYLLKDSF-------- 78
E G + KG+ + D VG + S LSL K +D+A++ L K F
Sbjct: 70 EVGCGQIVVKGRPLNEKKD-----VGEKDTGSSLSLQKRSDAAIAKLRKAKFPPDLDWID 124
Query: 79 ---VRSNTSMAFPYVSASEDVNLEDSLVSGFAEACGDDLGIGNVAFLGSCSMGNGNREET 135
+R S++ P +A L + ++ AE G ++ +G+V +G
Sbjct: 125 PLLIRGYESISDPGETAQVHPYLFTTSIAKLAEEKGAEIKLGSVTKIGYAG--------- 175
Query: 136 AALQSVQAYLTKRKEESHKGKTDLVVFCNGP 166
A++SV Y K ES V+ GP
Sbjct: 176 DAVESV-TYNDKESGESRTISATDVIIAAGP 205
>ref|ZP_00237425.1| membrane protein [Bacillus cereus G9241] gi|47556633|gb|EAL14965.1|
membrane protein [Bacillus cereus G9241]
Length = 215
Score = 34.3 bits (77), Expect = 4.0
Identities = 21/61 (34%), Positives = 33/61 (53%), Gaps = 1/61 (1%)
Query: 17 LKDLAKSVLSEAGWSNFLCKGKKFQDPLDLAL-LFVGGELQSSDLSLNKHADSALSYLLK 75
++D+ ++L +G + K K QD L L L + GE+QSS L + +H D L LK
Sbjct: 129 IRDVEYAILEPSGKLSVFQKQKGGQDALQFTLPLIIDGEIQSSHLQMIEHTDEWLVEKLK 188
Query: 76 D 76
+
Sbjct: 189 N 189
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,045,304
Number of Sequences: 2540612
Number of extensions: 15961704
Number of successful extensions: 36282
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 36258
Number of HSP's gapped (non-prelim): 47
length of query: 279
length of database: 863,360,394
effective HSP length: 126
effective length of query: 153
effective length of database: 543,243,282
effective search space: 83116222146
effective search space used: 83116222146
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)
Medicago: description of AC146331.8