BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145512.11 - phase: 0 
         (127 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL56987.1| functional candidate resistance protein KR1 [Glyc...    79  2e-14
gb|AAL04149.1| NR1 [Glycine max]                                       65  3e-10
gb|AAG48132.1| putative resistance protein [Glycine max]               61  7e-09
gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine...    44  7e-04
ref|YP_024037.1| beta-galactosidase [Picrophilus torridus DSM 97...    33  1.2
gb|AAL95081.1| Hemin-binding periplasmic protein hmuT precursor ...    32  4.5
dbj|BAD85208.1| hypothetical protein, conserved [Thermococcus ko...    31  7.7

>gb|AAL56987.1| functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 54/140 (38%), Positives = 77/140 (54%), Gaps = 29/140 (20%)

Query: 3    VSFWFCNKFPSIALGVV--------SAYTWGYLEH-PARVIINDNTFFYTHGRKIDRCSR 53
            +SFWF NKFP+IA+  +        S+  W +  +   +VIIN N   +        C+ 
Sbjct: 936  ISFWFRNKFPAIAICHIIKRVAEFSSSRGWTFRPNIRTKVIINGNANLFNSVVLGSDCTC 995

Query: 54   PDTYHLHLFHMQVEYFNGNMDKALLENKWNHAEVDF-GFPFMF------SGIHVLKEKSN 106
                   LF ++ E    N+D+ALLEN+WNHAEV   GF F F      +G+HVLK++SN
Sbjct: 996  -------LFDLRGERVTDNLDEALLENEWNHAEVTCPGFTFTFAPTFIKTGLHVLKQESN 1048

Query: 107  MKDIRFTNP------ENDAN 120
            M+DIRF++P      +ND N
Sbjct: 1049 MEDIRFSDPCRKTKLDNDFN 1068


>gb|AAL04149.1| NR1 [Glycine max]
          Length = 175

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 50/123 (40%), Positives = 68/123 (54%), Gaps = 25/123 (20%)

Query: 10  KFPSIAL--------GVVSAYTWGYL-EHPARVIINDNT-FFYTHGRKIDRCSRPDTYHL 59
           KFP+IA+           S+  W Y  +   +VIIN N   FY+     D CS       
Sbjct: 1   KFPAIAICHSIKRVPEFSSSRGWTYRPDIRTKVIINGNANLFYSMDLGSD-CSV------ 53

Query: 60  HLFHMQVEYFNGNMDKALLENKWNHAEVDF-GFPFMFS------GIHVLKEKSNMKDIRF 112
            LF  + +    N+D+ALLEN+WNHAEV   GF F F+      G+HVLK++SNM+DIRF
Sbjct: 54  -LFDPRDDKVTDNLDEALLENEWNHAEVTCPGFTFTFAPTFIKTGLHVLKQESNMEDIRF 112

Query: 113 TNP 115
           ++P
Sbjct: 113 SDP 115


>gb|AAG48132.1| putative resistance protein [Glycine max]
          Length = 1093

 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 43/127 (33%), Positives = 64/127 (49%), Gaps = 16/127 (12%)

Query: 2    SVSFWFCNKFPSIAL---GVVSAYTWGYLEHPARVIINDNTFFYTHGRKIDRCSRPD-TY 57
            S+SFWF NKFP I+L   G++  + +G       V IN N       R+      P  T 
Sbjct: 964  SISFWFRNKFPVISLCLAGLMHKHPFGL---KPIVSINGNKMKTEFQRRWFYFEFPVLTD 1020

Query: 58   HLHLFHMQVEYFNGNMDKALLENKWNHAEVDFGFPFMF---------SGIHVLKEKSNMK 108
            H+ +F  +   F  N+D+ + EN WNH  V     F +         +G+HV+K KS+++
Sbjct: 1021 HILIFGERQIKFEDNVDEVVSENDWNHVVVSVDVDFKWNPTEPLVVRTGLHVIKPKSSVE 1080

Query: 109  DIRFTNP 115
            DIRF +P
Sbjct: 1081 DIRFIDP 1087


>gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 41/139 (29%), Positives = 67/139 (47%), Gaps = 29/139 (20%)

Query: 2    SVSFWFCNKFPSIALGVVSA-------------YTWGYLEHPARVIIND--NTFFYTHGR 46
            S SFWF NKFP+  L ++ A              ++G+     +V IN     F+  H +
Sbjct: 916  SSSFWFRNKFPAKLLCLLIAPVSVPLYSLFPPKVSFGHHVPYPKVFINGKCQAFWGCHWK 975

Query: 47   KIDRCSRPDTYHLHLFHMQ-VEYFNGNM-DKALLENKWNHAEVDFGFPFMF-------SG 97
            +  R    D  H ++F +Q + + N N+ ++   E +WNH EV +             SG
Sbjct: 976  Q--RMMELD--HTYIFDLQKLPFENDNLFEEGAWEEEWNHVEVRYESVLELESSLIKGSG 1031

Query: 98   IHVLKEKSNM-KDIRFTNP 115
            IH+ +E+ +M +DIRF +P
Sbjct: 1032 IHIFREEGSMEEDIRFDDP 1050


>ref|YP_024037.1| beta-galactosidase [Picrophilus torridus DSM 9790]
          gi|48430979|gb|AAT43844.1| beta-galactosidase
          [Picrophilus torridus DSM 9790]
          Length = 453

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 17 GVVSAYTWGYLEHPARVIINDNTFFYTHGRKIDRCSR-PDTYHLHLFHMQVEYFNGNMDK 75
          G +S +  GYL++   +  N + + +TH + +   +   D Y       ++EY N N+ +
Sbjct: 8  GFMSGFHLGYLQNNKNLPENSDWYQWTHDKNVRMMNYIRDGYPED---NKIEYLNDNVIR 64

Query: 76 ALLENKWNHAEVDFGFPFMF 95
           L +N +N  ++D  +P +F
Sbjct: 65 DLHDNNFNLIKIDMDWPSLF 84


>gb|AAL95081.1| Hemin-binding periplasmic protein hmuT precursor [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
           gi|19704220|ref|NP_603782.1| Hemin-binding periplasmic
           protein hmuT precursor [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 286

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 70  NGNMDKALLENKWNHAEVDFGFPFMFSGIHVLKEKSNMKDIR 111
           +GN +K L+EN      +D+G     S I  LKEKS +KD++
Sbjct: 207 DGNWEKVLVENPDIIVIIDYGDQSAESKIKFLKEKSPIKDLK 248


>dbj|BAD85208.1| hypothetical protein, conserved [Thermococcus kodakarensis KOD1]
           gi|57640954|ref|YP_183432.1| hypothetical protein TK1019
           [Thermococcus kodakaraensis KOD1]
          Length = 140

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 20/85 (23%), Positives = 34/85 (39%), Gaps = 11/85 (12%)

Query: 24  WGYLEHPARVIINDNTFFYTHGRKIDRCSRPDTYHLH-----------LFHMQVEYFNGN 72
           W +L+   R+ +N+    +T GRK   C+R D   L            +   +  YF+G 
Sbjct: 29  WVFLDRSKRIDVNEKITIFTDGRKALVCTRLDCERLQKSEILERVRGIMDSYECVYFDGR 88

Query: 73  MDKALLENKWNHAEVDFGFPFMFSG 97
           + K     K+     D  + F  +G
Sbjct: 89  VAKVTRPEKFIETVPDGEYCFYLNG 113


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.326    0.140    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,533,221
Number of Sequences: 2540612
Number of extensions: 9850642
Number of successful extensions: 21415
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21403
Number of HSP's gapped (non-prelim): 7
length of query: 127
length of database: 863,360,394
effective HSP length: 103
effective length of query: 24
effective length of database: 601,677,358
effective search space: 14440256592
effective search space used: 14440256592
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)