BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144893.11 + phase: 0 /pseudo/partial
(652 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB68149.1| putative protein [Arabidopsis thaliana] gi|15230... 397 e-109
gb|AAD23720.1| hypothetical protein [Arabidopsis thaliana] gi|15... 325 2e-87
dbj|BAD54326.1| hypothetical protein [Oryza sativa (japonica cul... 110 1e-22
gi|31621286 TPA: RTl1 [Mus musculus] gi|46309585|ref|NP_908998.1... 76 4e-12
gb|AAC95573.1| orf 48 [Ateline herpesvirus 3] gi|11361081|pir||T... 75 7e-12
gb|AAX49604.1| RPGR [Macaca mulatta] 75 9e-12
ref|XP_416780.1| PREDICTED: similar to retinitis pigmentosa GTP-... 75 9e-12
ref|NP_703434.1| hypothetical protein [Plasmodium falciparum 3D7... 72 4e-11
ref|NP_179030.2| hypothetical protein [Arabidopsis thaliana] 72 7e-11
gb|AAX49609.1| RPGR [Sus scrofa] 71 1e-10
gb|AAX49605.1| RPGR [Gorilla gorilla] 70 2e-10
gb|AAM22073.1| retinitis pigmentosa GTPase regulator [Canis fami... 70 2e-10
gb|AAB53389.1| middle molecular weight neurofilament protein NF-... 70 3e-10
gb|AAG00553.1| retinitis pigmentosa GTPase regulator [Bos taurus] 70 3e-10
gb|AAG00551.1| retinitis pigmentosa GTPase regulator [Homo sapiens] 69 5e-10
gb|AAD25853.1| hypothetical protein [Arabidopsis thaliana] gi|25... 68 8e-10
pir||E86336 hypothetical protein F14O10.11 - Arabidopsis thalian... 68 8e-10
pir||I51116 NF-180 - sea lamprey gi|632549|gb|AAA80106.1| NF-180 68 8e-10
gb|AAG00554.1| retinitis pigmentosa GTPase regulator-like protei... 68 8e-10
gb|AAH83371.1| TRDN protein [Danio rerio] 68 1e-09
>emb|CAB68149.1| putative protein [Arabidopsis thaliana]
gi|15230963|ref|NP_191370.1| expressed protein
[Arabidopsis thaliana] gi|11280707|pir||T45971
hypothetical protein F9D24.20 - Arabidopsis thaliana
Length = 784
Score = 397 bits (1020), Expect = e-109
Identities = 241/626 (38%), Positives = 380/626 (60%), Gaps = 25/626 (3%)
Query: 43 ETLENPQIQTIPDPDSTNPNHDQEDTLMDEDPTHPQIEDDPEPEPPSPAATTVRRGHKRK 102
E+ ++ + Q + D + ++ Q + ++E EDD + ++ R G ++
Sbjct: 48 ESTQDEETQNLQDLEESDGRDQQLEASLEESRNE---EDDMDTTQAVSSSYYRRGGGPKR 104
Query: 103 KFGGKRTAAQKRKSHEKFEVIIQTLKPIPFVPDKVLDFESHKSLLERLGLWGFVHIEFDS 162
K G ++ Q KS EK EV+++TLKPI F P K LDF H+ LL+ LGLW FVH++FD
Sbjct: 105 KKGNQKKRKQLEKSKEKLEVLLKTLKPIAFAPCKTLDFARHEKLLKTLGLWDFVHLDFDQ 164
Query: 163 VIRKDLVAQVIASYNSTQRCSFVNDVKIMVNRAELGRAFKLP-KKNSAAGGSVVDVGELS 221
IR+DLVA ++A YNS +RCS+VN +I V+R +L RA KLP KK+ ++ E +
Sbjct: 165 NIREDLVANLVAYYNSERRCSYVNGARINVSRPDLARALKLPMKKDFVVTEEERELLE-N 223
Query: 222 AEDIAFLDELASNWMLL-HDDTHIMTKDVMQQLGLIKEGNLEKMDWAGLMWSMLEKELKA 280
E + F+DE+ S +LL DD IM ++++ IK+ +LEK+DW L+W M+EKELKA
Sbjct: 224 DESVRFIDEIVSTCVLLQRDDMWIMPVEIVEWTRDIKQKHLEKLDWPKLLWFMVEKELKA 283
Query: 281 -THLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDG 339
L +C++ASHLQ LIKSQ ++L +E + E + ++ D+ +E + + +ED
Sbjct: 284 EPPLGDCFFASHLQLLIKSQKEDLLKEKCKADDEEDDDDD--DDDVKEVDFLVKSPKEDC 341
Query: 340 VVVKDEVDGSGDVKM--GGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGE-QMMD 396
+ VK+E G+ D + G V+ + + +EEH +EL+LGQ+ V + +E+G E Q MD
Sbjct: 342 LEVKEEDVGAADSRKDDGAVDLKEDKYVEEHMLELNLGQETVSEMVSGEERGPVEGQPMD 401
Query: 397 FEQSKKEETEMWFLGQKNYVGEPSLRPC-HNRDRKGIDCEQVK--EDEGEEEEHEQEEEE 453
E++KKEE E W ++ G LR C H+ R+G + ++ + GE+E E EEE
Sbjct: 402 VEENKKEEDERWAWNGDSHAGSHFLRRCNHSSAREGDEDNHIEGSMEMGEDEPIEDVEEE 461
Query: 454 EDDVEEDEHDVGF-HFSTKHHLEGMPSGTGSSIQAMEAVQMPFGSGIHLHDSSV-GDFLS 511
E + + ++H+ GF F L+G+ G ++ +A + + SG+ +H +S+ GDFL+
Sbjct: 462 ETEEDTEKHEGGFPFFPNGDSLQGVGQG---NLMLGDASPLGYNSGLQIHGNSIGGDFLA 518
Query: 512 ARDDPQMIHG---SSLFGNG-HKRDIGLDNHNSHHTLNGSNKRLRSDSP-WSSQPIDFEG 566
+R + M G SSLFGNG +KR+I +N ++H+ N NKRLR++ P W +P +
Sbjct: 519 SRGEMHMAMGSGSSSLFGNGNNKREIEHENGITYHSHNPINKRLRTEEPSWDEKPPPVDM 578
Query: 567 CMEQMQHFMEKARMMYASKDQAAEESAANQQVLLNELQRRDEMVAHLQKARIDQTQKTQI 626
C++QM ++ EKAR+ +A KD+ E+S NQQ L+NELQ + M+ L++ + ++ Q+ I
Sbjct: 579 CLDQMAYWAEKARLSFAEKDREREQSVINQQYLMNELQSKTAMIQELERTKFEEQQRKDI 638
Query: 627 EVYRLEKELYMMQSLVEGYRKALKET 652
+Y+LE EL MM S+VEGYRKALK T
Sbjct: 639 MIYKLESELRMMTSVVEGYRKALKIT 664
>gb|AAD23720.1| hypothetical protein [Arabidopsis thaliana]
gi|15227930|ref|NP_181766.1| expressed protein
[Arabidopsis thaliana] gi|25339468|pir||B84853
hypothetical protein At2g42370 [imported] - Arabidopsis
thaliana
Length = 715
Score = 325 bits (834), Expect = 2e-87
Identities = 206/559 (36%), Positives = 318/559 (56%), Gaps = 52/559 (9%)
Query: 98 GHKRKKFGGKRTAAQKRKSHEKFEVIIQTLKPIPFVPDKVLDFESHKSLLERLGLWGFVH 157
G KRKK K+ Q+ KS +K +V+++TLK +PF P K LDF ++SLL+ LGLW FVH
Sbjct: 92 GPKRKKCNDKKRKQQEEKSKKKLKVLVETLKLVPFKPLKTLDFACYESLLKTLGLWDFVH 151
Query: 158 IEFDSVIRKDLVAQVIASYNSTQRCSFVNDVKIMVNRAELGRAFKLPKKNSAAGGSVVDV 217
+EFD + DLVAQ+IASY++ +CS++N +I ++RA+L R+ KLP K D
Sbjct: 152 LEFDQDMDYDLVAQLIASYSAGGKCSYINGSRIKLSRADLARSLKLPNKKERVVILDEDK 211
Query: 218 GEL-SAEDIAFLDELASNWMLLH-DDTHIMTKDVMQQLGLIKEGNLEKMDWAGLMWSMLE 275
L S E I+ ++++ SNWMLLH DD +M +V++ + IK+ L+K+DWAGLMW M+E
Sbjct: 212 EFLESDESISVVEDVISNWMLLHCDDAWMMPDEVVEWMKGIKKKQLDKLDWAGLMWFMVE 271
Query: 276 KELKATH-LEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEE 334
KELKA L +C+YASHLQ +I+SQ +LF+E +D +
Sbjct: 272 KELKAEPPLGDCFYASHLQMVIRSQKIDLFKE------------------------RDLK 307
Query: 335 EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
++D + +D G + + +EE +L+LGQ V + E EQ
Sbjct: 308 VKDDIAALNLGMDD------GATDSKKENCVEESTTKLNLGQVIVSEMAATMELYHEEQA 361
Query: 395 MDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEE 454
+D E++K++ ++ K E R + ++ G +V E+E E+E E++ E++
Sbjct: 362 IDLEENKEQPMDL--KEAKEEGDEMEWRQPY--EKNGTRHRKVGENEILEDEIEKDGEKQ 417
Query: 455 DDVEEDEHDVGFHFSTKHHLEGMPSGTGSSIQAMEAVQMPFGSGIHLHDSSVGDFLSARD 514
+ + F H E + G S++ + SG+ +H SS DFL+ R
Sbjct: 418 EG-----GFLLFRNGKTLHQENLMLGDTSTLG--------YNSGLQVHGSSTCDFLAPRA 464
Query: 515 DPQMIHGSSLFGNGHKRDIGLDNHNSHHTLN-GSNKRLRSDSPWSSQPIDFEGCMEQMQH 573
M+ G S FGN +KR+ G +N S+H N S KRL++ S W +P+ F+ CMEQ++H
Sbjct: 465 VMHMVPGRSHFGNDNKREFGHENDISYHFDNPASTKRLKTPS-WDDKPVPFDICMEQIKH 523
Query: 574 FMEKARMMYASKDQAAEESAANQQVLLNELQRRDEMVAHLQKARIDQTQKTQIEVYRLEK 633
+KA++ Y KDQA ES +Q+L NELQRR++++ L K ++ K +E+Y+LE
Sbjct: 524 LADKAKLSYVEKDQACGESNMREQMLQNELQRREDIIQQLHKESYEELHKKNVEIYKLEN 583
Query: 634 ELYMMQSLVEGYRKALKET 652
EL MM S++ Y+KALKE+
Sbjct: 584 ELRMMTSVLAWYQKALKES 602
>dbj|BAD54326.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 981
Score = 110 bits (275), Expect = 1e-22
Identities = 125/462 (27%), Positives = 191/462 (41%), Gaps = 76/462 (16%)
Query: 77 PQIEDDPEP--EPPSPAATTVRRGHKRKK---FGGK---------RTAAQKRKSHEKFEV 122
P DP+P +P + AA + RK GGK R AA++R +H + +
Sbjct: 2 PDSSADPQPPLQPSAAAANSDPDMPPRKAPAGGGGKLKRPLTLKLRAAAEQRLAHLRARL 61
Query: 123 IIQTLKPIPFVPDKVLDFES--HKSLLERLGLWGFVHI------EFDSVIRKDLVAQVIA 174
L P+P P + L E ++ L LGL GF + +R DLVA ++A
Sbjct: 62 ---RLHPLPPPPPRALAPEGSPEEAALRALGLLGFARLGPAFSSSASEPLRPDLVAHLVA 118
Query: 175 SYNSTQRCSFVNDVKIMVNRAELGRAFKLPKKNSAAGGSVVDVGELSAEDIAFLDELASN 234
Y+ QR SFV V++ V R A LP K S A A A EL
Sbjct: 119 YYDPPQRRSFVRGVRVAVTRKHFADALCLPCKPSPAAAPPPPEDADPAAVAAAAMELLQA 178
Query: 235 WML---LHDDTHIMTKDVMQQLGLIKEGNLEKMDWAGLMWSMLEKELKATHLEE---CYY 288
++L DD I+ +V +++G+ ++DWAGL+W ++EKE++ + CYY
Sbjct: 179 YVLPPFQGDDMCILPPEVAAAEQAVRDGSAHRVDWAGLIWGLVEKEMQDLPKRDDGLCYY 238
Query: 289 ASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGE------AKDEEEEEDG--- 339
++LQ LI +Q ELFE T E GE V +EE+GE +K EE E G
Sbjct: 239 GAYLQRLIWAQKPELFERTEEGERGGEVVLEVSDMDEEDGEDDTDVKSKSMEELESGDAD 298
Query: 340 ------VVVKDEVDG------------SGDVKMGGVEENQVQELEEHNIELSLGQDKVET 381
+ K E G SGD + G +++ E + L + + E
Sbjct: 299 ADAKNSNLEKSEAGGADLRSNCLEELVSGDADVRGTSAEELESHVEDKVSKGLEETRAED 358
Query: 382 LPVEKEQGEGEQMMDFEQSKKE--ETEMWFLGQK-----NYVGEPSLRPCHNRDRKGIDC 434
+ + + +D + K E+EM F+ + + V P+
Sbjct: 359 VDANHMDLDESEAVDEDAKGKSFGESEMGFVSVEEVSVTHEVMLPNYEEVATEGDGDTAM 418
Query: 435 EQVKEDEGEEEE-----HE------QEEEEEDDVEEDEHDVG 465
V+ D G E HE +++EEE D +E+ G
Sbjct: 419 AAVENDAGSLAETVVMTHEEFVAVPEDDEEEADGDEENDATG 460
Score = 91.7 bits (226), Expect = 7e-17
Identities = 140/566 (24%), Positives = 230/566 (39%), Gaps = 100/566 (17%)
Query: 152 LWGFVHIEFDSVIRKDLVAQVIASYNSTQRCSFVNDVKIMVNRAELGRAFKLPKKNSAAG 211
+WG V E + ++D +Y QR I + EL F+ ++ G
Sbjct: 217 IWGLVEKEMQDLPKRDDGLCYYGAY--LQRL-------IWAQKPEL---FERTEEGERGG 264
Query: 212 GSVVDVGELSAEDIAFLDELASNWMLLHDDTHIMTKDVMQQLGL------IKEGNLEKMD 265
V++V ++ ED DDT + +K M++L K NLEK +
Sbjct: 265 EVVLEVSDMDEEDG-------------EDDTDVKSKS-MEELESGDADADAKNSNLEKSE 310
Query: 266 WAG--LMWSMLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEG---EEGV 320
G L + LE+ + A L+ ++ + + EET +V+ +E
Sbjct: 311 AGGADLRSNCLEELVSGDADVRGTSAEELESHVEDKVSKGLEETRAEDVDANHMDLDESE 370
Query: 321 VKDEEEEGEAKDEEE----EEDGVVVKDEV----------DGSGDVKMGGVEENQVQELE 366
DE+ +G++ E E + V V EV +G GD M VE N L
Sbjct: 371 AVDEDAKGKSFGESEMGFVSVEEVSVTHEVMLPNYEEVATEGDGDTAMAAVE-NDAGSLA 429
Query: 367 E-----HNIELSLGQDKVETLPVEKEQ-------GEGEQMMDFEQSKKEETEMWFLGQK- 413
E H +++ +D E ++E G G +E+ + LG+
Sbjct: 430 ETVVMTHEEFVAVPEDDEEEADGDEENDATGLSLGIGSANDYDSTDGEEDANVENLGEGD 489
Query: 414 --NYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQE---------EEEEDDVEED-E 461
N E S + R E + G+E++H + + +D++ +
Sbjct: 490 SGNEEAEESEEDAFGQYRG----EDMNWTMGDEKDHGSDFVNLQFDNLNKGDDEIRNEVS 545
Query: 462 HDVGFHFSTKHHLEGMPSGTGSSIQAMEAVQMPFGSGIHLHDSSVGDFLSARDDPQ---- 517
+D GF L GM S + +QAM ++ + + D S G+FL+ D
Sbjct: 546 YDDGFS-GKMGSLHGMTST--NLLQAMSSIPATYNVSENAPDLSSGEFLAMGADAHKNGL 602
Query: 518 -MIHGSS-LFGNGHKRDIG-LDNHNS----HHTLN--GSNKRLRSDSPWSSQP---IDFE 565
+ GSS F N KR IG ++ +N H + NKR+R+ + S P +
Sbjct: 603 DLGTGSSYFFENNGKRHIGEIEEYNDPMPGHEQFDQRNPNKRMRNSNNSSIPPGSSVFNA 662
Query: 566 GCMEQMQHFMEKARMMYASKDQAAEESAANQQVLLNELQRRDEMVAHLQKARIDQTQKTQ 625
E Q M KA M Y K++ ++ +Q L N LQ +++++ L AR +Q K Q
Sbjct: 663 HFAEPFQSLMSKASMFYEQKERELQDVLVEKQYLANMLQEKEQIIQSLNSARFEQENKWQ 722
Query: 626 IEVYRLEKELYMMQSLVEGYRKALKE 651
E+ R E +L +M LV GYR+ALK+
Sbjct: 723 AELRRFEHDLNVMAQLVTGYRRALKQ 748
>gi|31621286 TPA: RTl1 [Mus musculus] gi|46309585|ref|NP_908998.1|
retrotransposon-like 1 [Mus musculus]
Length = 1744
Score = 75.9 bits (185), Expect = 4e-12
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
E E +E ++EEE+GE ++ EEEEDG + E + G+ + EE + + EE E
Sbjct: 1289 ETEDKEDDEEEEEEDGEEEEGEEEEDGEEEEGEEEEDGEEE----EEEEEDDEEEEGEEE 1344
Query: 373 SLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGI 432
G+++ + E+ EGE+ D E+ + EE G++ GE + + +
Sbjct: 1345 EDGEEEEGEEEEDGEEEEGEEEEDGEEEEGEEE-----GEEEEEGEEEEEEEEDEEEEEE 1399
Query: 433 DCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ E+ +E+E EEEE E+EEEEE++ EE+E +
Sbjct: 1400 EEEEEEEEEEEEEEEEEEEEEEEEDEEEEDE 1430
Score = 73.9 bits (180), Expect = 1e-11
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 25/155 (16%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E +GE EEG +EEE+GE ++ EEEEDG ++E + D + G EE +E E
Sbjct: 1301 EEDGEEEEG---EEEEDGEEEEGEEEEDG--EEEEEEEEDDEEEEGEEEEDGEEEEGEEE 1355
Query: 371 ELSLGQDKVETLPVEKEQG--EGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRD 428
E ++ E E+E+G EGE+ + E+ ++EE + +
Sbjct: 1356 EDGEEEEGEEEEDGEEEEGEEEGEEEEEGEEEEEEEED------------------EEEE 1397
Query: 429 RKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ + E+ +E+E EEEE E+EEEEED+ EEDE +
Sbjct: 1398 EEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEDEEE 1432
Score = 68.9 bits (167), Expect = 5e-10
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 38/166 (22%)
Query: 299 QHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDE--EEEEDGVVVKDEVDGSGDVKMGG 356
+ +E EE E EGE EE ++EEEE + ++E EEEEDG + E + G+ + G
Sbjct: 1305 EEEEGEEEEDGEEEEGEEEEDGEEEEEEEEDDEEEEGEEEEDGEEEEGEEEEDGEEEEGE 1364
Query: 357 VEEN-QVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNY 415
EE+ + +E EE E G++ E+E+ E E+ + E+ ++EE E
Sbjct: 1365 EEEDGEEEEGEEEGEEEEEGEE-------EEEEEEDEEEEEEEEEEEEEEE--------- 1408
Query: 416 VGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
E+ +E+E EEEE E++EEEED+ EEDE
Sbjct: 1409 -------------------EEEEEEEEEEEEEEEDEEEEDEEEEDE 1435
Score = 58.2 bits (139), Expect = 8e-07
Identities = 56/203 (27%), Positives = 90/203 (43%), Gaps = 55/203 (27%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
EE E +GE EEG +EEE+GE ++ EEEEDG ++E + G+ + G EE + +E
Sbjct: 1338 EEEGEEEEDGEEEEG---EEEEDGEEEEGEEEEDG--EEEEGEEEGEEEEEGEEEEEEEE 1392
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
EE E+E+ E E+ + E+ ++EE E
Sbjct: 1393 DEE-----------------EEEEEEEEEEEEEEEEEEEEEE------------------ 1417
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGTGSS 484
+E+E E+EE E EEEE+++V ++ H L G+ + S
Sbjct: 1418 -------------EEEEEEDEEEEDEEEEDEEVPSMVRELLAAIPMDHILNGLLA--HFS 1462
Query: 485 IQAMEAVQMPFGSGIHLHDSSVG 507
+ + AV + F G+ S +G
Sbjct: 1463 VAQIRAVVLNFFRGLLYWKSLLG 1485
Score = 42.0 bits (97), Expect = 0.062
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 376 QDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCE 435
+DK + E+E GE E+ + E ++EE E G++ E + + +G + E
Sbjct: 1291 EDKEDDEEEEEEDGEEEEGEEEEDGEEEEGEEEEDGEEEEEEEED-----DEEEEGEEEE 1345
Query: 436 QVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+E+EGEEEE + EEEE ++ E+ E + G
Sbjct: 1346 DGEEEEGEEEE-DGEEEEGEEEEDGEEEEG 1374
>gb|AAC95573.1| orf 48 [Ateline herpesvirus 3] gi|11361081|pir||T42963 hypothetical
protein 48 - ateline herpesvirus 3 (strain 73)
gi|9631239|ref|NP_048021.1| orf 48 [Ateline herpesvirus
3]
Length = 792
Score = 75.1 bits (183), Expect = 7e-12
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
K +E E+ + E E EE +DEEEE E +DEE+EE+ +DE D +
Sbjct: 463 KGDGEEDEEDEEEEDEEEEEEEEEEEDEEEEEEEEDEEDEEEEEDEEDEEDEEDEED--- 519
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
EE++ E +E + E +++ E E+E+ E E+ + E + EE E ++
Sbjct: 520 -EEDEEDEEDEEDEEEEEDEEEEEDEEDEEEEEEEEEEEEEEDEEDEEDEEEKEDEEEKE 578
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E + + K D ++ +E+EGEE+E ++++EEE+D E+DE +
Sbjct: 579 DEEEKEDEEDEEEKEDDEDEEEEEEGEEKEDDEDDEEEEDEEDDEEE 625
Score = 74.3 bits (181), Expect = 1e-11
Identities = 48/153 (31%), Positives = 80/153 (51%), Gaps = 11/153 (7%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
+G+GEE +EEE+ E ++EEEEE+ ++E + D + EE++ E +E + E
Sbjct: 463 KGDGEEDEEDEEEEDEEEEEEEEEEEDEEEEEEEEDEEDEEEEEDEEDEEDEEDEEDEED 522
Query: 373 SLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGI 432
++ E E+++ E E D E+ ++EE E E D +
Sbjct: 523 EEDEEDEEDEEEEEDEEEEEDEEDEEEEEEEEEE-----------EEEEDEEDEEDEEEK 571
Query: 433 DCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ E+ KEDE E+E+ E EEE+EDD +E+E + G
Sbjct: 572 EDEEEKEDEEEKEDEEDEEEKEDDEDEEEEEEG 604
Score = 69.3 bits (168), Expect = 4e-10
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
EE + E E +E +DEE+E + +DEEEEED +DE D + + EE + +E
Sbjct: 504 EEEDEEDEEDEEDEEDEEDEEDEEDEEDEEEEEDEEEEEDEEDEEEEEEEEEEEEEEDEE 563
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
EE E ++K + E E+ E E+ D ++ ++EE E +K +
Sbjct: 564 DEEDEEEKEDEEEKEDEEEKEDEEDEEEKEDDEDEEEEEEGE-----EKEDDEDDEEEED 618
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
D + D E+ EDE E+E+ E E+EE++D E++E D
Sbjct: 619 EEDDEEEEDEEEEDEDE-EDEDEEDEDEEDEDEEDEEGD 656
Score = 56.6 bits (135), Expect = 2e-06
Identities = 54/164 (32%), Positives = 76/164 (45%), Gaps = 44/164 (26%)
Query: 299 QHKELFEETLVVEVEGEGEEGVVKDEEEEGE-AKDEEEEEDGVVVKDEVDGSGDVKMGGV 357
+ +E EE E E E EE ++EEE+ E +DEEE+ED +DE
Sbjct: 533 EEEEDEEEEEDEEDEEEEEEEEEEEEEEDEEDEEDEEEKEDEEEKEDE------------ 580
Query: 358 EENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVG 417
EE + +E EE E E+E+ EGE+ D E ++EE E
Sbjct: 581 EEKEDEEDEEEK----------EDDEDEEEEEEGEEKEDDEDDEEEEDE----------- 619
Query: 418 EPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
D + D E+ EDE EE+E E++E+EED+ EEDE
Sbjct: 620 --------EDDEEEEDEEE--EDEDEEDEDEEDEDEEDEDEEDE 653
Score = 55.5 bits (132), Expect = 5e-06
Identities = 51/163 (31%), Positives = 72/163 (43%), Gaps = 45/163 (27%)
Query: 301 KELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEEN 360
KE+ EE V EG+ E KD EEE E KDEEE + K G EE+
Sbjct: 428 KEVGEEKSVKSGEGKKSE---KDSEEEAEDKDEEENK---------------KKGDGEED 469
Query: 361 QVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPS 420
+ E EE E+E+ E E+ E+ ++EE E E
Sbjct: 470 EEDEEEED----------------EEEEEEEEE----EEDEEEEEE-------EEDEEDE 502
Query: 421 LRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
D + + E+ +EDE +EE+ E EEEEED+ EE++ +
Sbjct: 503 EEEEDEEDEEDEEDEEDEEDEEDEEDEEDEEEEEDEEEEEDEE 545
Score = 46.6 bits (109), Expect = 0.003
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 28/151 (18%)
Query: 317 EEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG---GVEENQVQELEEHNIELS 373
++ + K+E E G+ + E++ K GD ++G V+ + ++ E+ + E +
Sbjct: 393 DKSIDKNESEGGDHSEINREKNRKRKKPNGFRVGDKEVGEEKSVKSGEGKKSEKDSEEEA 452
Query: 374 LGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGID 433
+D+ E K++G+GE+ + E+ + EE E + + +
Sbjct: 453 EDKDEEEN----KKKGDGEEDEEDEEEEDEEEE--------------------EEEEEEE 488
Query: 434 CEQVKEDEGEEEEHEQEEEEEDDV-EEDEHD 463
E+ +E+E +EE+ E+EE+EED+ EEDE D
Sbjct: 489 DEEEEEEEEDEEDEEEEEDEEDEEDEEDEED 519
>gb|AAX49604.1| RPGR [Macaca mulatta]
Length = 553
Score = 74.7 bits (182), Expect = 9e-12
Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
E EGEEG EEEEGE K EEE E+G +E +G G+ + G EE + +E E
Sbjct: 301 EEEGEEG----EEEEGEGKGEEEGEEGEGEGEEEEGEGEGEEEGEEEEEGEEDGEEGEGE 356
Query: 373 SLGQDKVETLPVEKE-----QGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNR 427
G+ + E E+E +GEGE + + ++EE E G++ GE
Sbjct: 357 EEGKGEEEEGEGEEEGEGEEEGEGEGEEEEGEGEEEEGEEEGEGEEEGEGEEEEGEVEGE 416
Query: 428 DRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ ++ E+ E+EGEEE E+E EEE + +E E
Sbjct: 417 EEGEVEGEEEGEEEGEEEGEEEEGEEEGEEKEKE 450
Score = 67.4 bits (163), Expect = 1e-09
Identities = 69/224 (30%), Positives = 104/224 (45%), Gaps = 28/224 (12%)
Query: 254 GLIKEGNLEKMDWAGLMWSMLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVE 313
G ++EG EK + G KE K EE + + + ++ E V E +
Sbjct: 194 GEVEEGEREKEERVG-------KEEKGE--EEGDQGEGEEEGTEGEGEQKEEGGEVEEGK 244
Query: 314 GEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG--------GVEENQVQEL 365
GEGE+ K EEEEGE ++EEEE G ++E + G+ + G G EE + +E
Sbjct: 245 GEGEKEEGKGEEEEGEGEEEEEEGQGEREEEEGEEEGEEEEGEGKGEEEEGEEEGKEEEG 304
Query: 366 EEHNIELSLGQDKVETLPVEKE------QGEGEQMMDFEQSKKEETEMWFLGQKNYVGEP 419
EE E G+ + E E E +GEGE+ + E+ +E+ E G++ GE
Sbjct: 305 EEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEEEGEEEEEGEEDGEEG-EGEEEGKGEE 363
Query: 420 SLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ + E+ E EGEEEE E EEEE ++ E E +
Sbjct: 364 E----EGEGEEEGEGEEEGEGEGEEEEGEGEEEEGEEEGEGEEE 403
Score = 67.0 bits (162), Expect = 2e-09
Identities = 55/155 (35%), Positives = 75/155 (47%), Gaps = 13/155 (8%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EGE E G ++EEE+ E ++E+EEE K+E +G G EE +V+E E
Sbjct: 145 EGEGEEEHGEGEEEEEDREEEEEKEEEKEGEGKEEGEGEAVEGEGEKEEGEVEEGEREKE 204
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
E ++K E E +QGEGE E+ + E E QK GE +
Sbjct: 205 ERVGKEEKGEE---EGDQGEGE-----EEGTEGEGE-----QKEEGGEVEEGKGEGEKEE 251
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
G E+ E E EEEE + E EEE+ EE E + G
Sbjct: 252 GKGEEEEGEGEEEEEEGQGEREEEEGEEEGEEEEG 286
Score = 62.0 bits (149), Expect = 6e-08
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEE-------EEDGVVVKDEVDGSGDVKMG-GVEENQVQE 364
E EGEEG + EEEEGE + EEE EEDG + E +G G+ + G G EE + +E
Sbjct: 317 EEEGEEGEGEGEEEEGEGEGEEEGEEEEEGEEDGEEGEGEEEGKGEEEEGEGEEEGEGEE 376
Query: 365 LEEHNIELSLGQDKVETLPVE---KEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSL 421
E E G+ + E E +E+GEGE+ + E +EE E+ + GE
Sbjct: 377 EGEGEGEEEEGEGEEEEGEEEGEGEEEGEGEEE-EGEVEGEEEGEVEGEEEGEEEGEEE- 434
Query: 422 RPCHNRDRKGIDCEQVKEDEGE---------EEEHEQEEEEEDDVEEDEHDVGFHFSTKH 472
+ +G + + KE EGE EEE E+ + +E EE+E G +
Sbjct: 435 ----GEEEEGEEEGEEKEKEGEGEENRRNREEEEEEEGKYQETGEEENERQNGEEYKKVS 490
Query: 473 HLEG 476
++G
Sbjct: 491 KMKG 494
Score = 61.6 bits (148), Expect = 8e-08
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 305 EETLVVEVEGEGEEGVVKDE--EEEG----------EAKDEEEEEDGVVVKDEVDGSGDV 352
EE V E E E EE V K+E EEEG E + E++EE G V + + +G +
Sbjct: 192 EEGEVEEGEREKEERVGKEEKGEEEGDQGEGEEEGTEGEGEQKEEGGEVEEGKGEGEKEE 251
Query: 353 KMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQ 412
G EE + +E EE ++ E E+ +G+GE+ E+ K+EE E +
Sbjct: 252 GKGEEEEGEGEEEEEEGQGEREEEEGEEEGEEEEGEGKGEEEEGEEEGKEEEGEEGEEEE 311
Query: 413 KNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
GE + +G E+ E EGEEE E+EE EED E + + G
Sbjct: 312 GEGKGEE-----EGEEGEGEGEEEEGEGEGEEEGEEEEEGEEDGEEGEGEEEG 359
Score = 59.3 bits (142), Expect = 4e-07
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 296 IKSQHKELFEETLVVEVEGEGEEGVVKD------EEEEGEAKDEEEEEDGVVVKDEVDGS 349
I+ Q E EE + V + E ++ D E EG+AK E EDG + DG+
Sbjct: 16 IEEQEVEANEENVKVHGGRQEETEILSDDLTDKAEVSEGKAKSAGEAEDGP--EGRGDGT 73
Query: 350 GDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKK-EETEMW 408
+ G E Q +E EE EK++G GE + E K E E W
Sbjct: 74 CEEGSSGAEHWQGEEREEKG---------------EKDKGGGEMVRPGEGEKDLAEEEEW 118
Query: 409 FLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHF 468
+ H ++R ++++E EGEEE E EEEEED EE+E +
Sbjct: 119 EKRDGKEQEQKEREQGHQKERN----QEMEEGEGEEEHGEGEEEEEDREEEEEKE----- 169
Query: 469 STKHHLEGMPSGTGSSIQ 486
+ EG G G +++
Sbjct: 170 -EEKEGEGKEEGEGEAVE 186
Score = 57.8 bits (138), Expect = 1e-06
Identities = 54/159 (33%), Positives = 84/159 (51%), Gaps = 28/159 (17%)
Query: 311 EVEGEGEEG----VVKDEEEEGEAKDE-EEEEDGVVVKDEVDGSGDVKMG-----GVEEN 360
E E +GEEG K EEEEGE ++E E EE+G +E +G G+ + G G EE
Sbjct: 345 EGEEDGEEGEGEEEGKGEEEEGEGEEEGEGEEEGEGEGEEEEGEGEEEEGEEEGEGEEEG 404
Query: 361 QVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPS 420
+ +E EE +E G+++ E E+ + EGE+ + E+ ++E E +K GE +
Sbjct: 405 EGEE-EEGEVE---GEEEGEVEGEEEGEEEGEEEGEEEEGEEEGEEK----EKEGEGEEN 456
Query: 421 LRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEE 459
R NR E+ +E+EG+ +E +EE E + EE
Sbjct: 457 RR---NR-------EEEEEEEGKYQETGEEENERQNGEE 485
Score = 55.5 bits (132), Expect = 5e-06
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 35/203 (17%)
Query: 276 KELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEE 335
KE + E+ + Q + + + +E E E + E EE +++E EG+ + E E
Sbjct: 124 KEQEQKEREQGHQKERNQEMEEGEGEEEHGEGEEEEEDREEEEEKEEEKEGEGKEEGEGE 183
Query: 336 EEDGVVVKDEVDGSGDVKMG-------------GVEENQVQELEEHNIELSLGQDKVETL 382
+G K+E G+V+ G G EE E EE E G+ K E
Sbjct: 184 AVEGEGEKEE----GEVEEGEREKEERVGKEEKGEEEGDQGEGEEEGTE-GEGEQKEEGG 238
Query: 383 PVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEG 442
VE+ +GEGE+ E+ K EE E G+ GE + +G E+ E+EG
Sbjct: 239 EVEEGKGEGEK----EEGKGEEEE----GE----GEE-----EEEEGQGEREEEEGEEEG 281
Query: 443 EEEEHEQEEEEEDDVEEDEHDVG 465
EEEE E + EEE+ EE + + G
Sbjct: 282 EEEEGEGKGEEEEGEEEGKEEEG 304
Score = 53.5 bits (127), Expect = 2e-05
Identities = 52/183 (28%), Positives = 83/183 (44%), Gaps = 20/183 (10%)
Query: 314 GEGEEGVVKDEE------EEGEAKDEEEEEDGVVVKDEVDGSGDVKMG-GVEENQVQELE 366
GEGE+ + ++EE +E E K+ E+ ++ +G G+ + G G EE + +E E
Sbjct: 106 GEGEKDLAEEEEWEKRDGKEQEQKEREQGHQKERNQEMEEGEGEEEHGEGEEEEEDREEE 165
Query: 367 EHNIELSLGQDKVE------TLPVEKEQG-------EGEQMMDFEQSKKEETEMWFLGQK 413
E E G+ K E EKE+G E E+ + E+ +EE + ++
Sbjct: 166 EEKEEEKEGEGKEEGEGEAVEGEGEKEEGEVEEGEREKEERVGKEEKGEEEGDQGEGEEE 225
Query: 414 NYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHH 473
GE + +G + +E +GEEEE E EEEEE+ E E + G +
Sbjct: 226 GTEGEGEQKEEGGEVEEGKGEGEKEEGKGEEEEGEGEEEEEEGQGEREEEEGEEEGEEEE 285
Query: 474 LEG 476
EG
Sbjct: 286 GEG 288
Score = 44.7 bits (104), Expect = 0.010
Identities = 48/178 (26%), Positives = 80/178 (43%), Gaps = 21/178 (11%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEED---------GVVVKDEVDGSGDVKMGGVEENQVQ 363
+G EEG E +GE ++E+ E+D G KD + K G E+ Q +
Sbjct: 71 DGTCEEGSSGAEHWQGEEREEKGEKDKGGGEMVRPGEGEKDLAEEEEWEKRDGKEQEQKE 130
Query: 364 ELEEHNIELSLGQDKVETLPVEKEQGEGEQMM-DFEQSKKEETEMWFLGQKNYVGEPSLR 422
+ H E + ++ E E+E GEGE+ D E+ +++E E G++ GE
Sbjct: 131 REQGHQKERNQEMEEGEG---EEEHGEGEEEEEDREEEEEKEEEKEGEGKEEGEGEAV-- 185
Query: 423 PCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSG 480
+ +G + E+ + +EGE E+ E+ +EE EE + G T+ E G
Sbjct: 186 -----EGEG-EKEEGEVEEGEREKEERVGKEEKGEEEGDQGEGEEEGTEGEGEQKEEG 237
Score = 40.4 bits (93), Expect = 0.18
Identities = 29/71 (40%), Positives = 40/71 (55%), Gaps = 7/71 (9%)
Query: 305 EETLVVEVEGEGEE-GVVKDEEEEGEAKDEEEEEDGVVV------KDEVDGSGDVKMGGV 357
EE VE E EGEE G + EEEEGE + EE+E++G ++E + G + G
Sbjct: 416 EEEGEVEGEEEGEEEGEEEGEEEEGEEEGEEKEKEGEGEENRRNREEEEEEEGKYQETGE 475
Query: 358 EENQVQELEEH 368
EEN+ Q EE+
Sbjct: 476 EENERQNGEEY 486
Score = 39.3 bits (90), Expect = 0.40
Identities = 38/103 (36%), Positives = 50/103 (47%), Gaps = 16/103 (15%)
Query: 311 EVEGEGEE-GVVKDE------EEEGEAKDEEE-----EEDGVVVKDEVDGSGDVKMGGVE 358
E EGEGEE G ++E EEEGE + EEE EE+G + E +G K G E
Sbjct: 395 EEEGEGEEEGEGEEEEGEVEGEEEGEVEGEEEGEEEGEEEGEEEEGEEEGEEKEKEGEGE 454
Query: 359 ENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSK 401
EN+ EE E G+ + ET E E+ GE+ + K
Sbjct: 455 ENRRNREEEEEEE---GKYQ-ETGEEENERQNGEEYKKVSKMK 493
Score = 38.5 bits (88), Expect = 0.69
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 311 EVEGEGEEGVVKDEEE---EGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE--L 365
EVEGE EEG V+ EEE EGE + EEEE + + E +G G+ EE + +E
Sbjct: 412 EVEGE-EEGEVEGEEEGEEEGEEEGEEEEGEEEGEEKEKEGEGEENRRNREEEEEEEGKY 470
Query: 366 EEHNIELSLGQDKVETLPVEKEQG 389
+E E + Q+ E V K +G
Sbjct: 471 QETGEEENERQNGEEYKKVSKMKG 494
>ref|XP_416780.1| PREDICTED: similar to retinitis pigmentosa GTP-ase regulator RPGR
[Gallus gallus]
Length = 1240
Score = 74.7 bits (182), Expect = 9e-12
Identities = 57/173 (32%), Positives = 90/173 (51%), Gaps = 30/173 (17%)
Query: 304 FEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQ 363
F+E +E + +GE +++E E KDE E+E G + + VD +V++GG
Sbjct: 1021 FDEDKQLETKNDGESN--EEQESEDSVKDETEKESGCQLNETVDS--EVELGG------- 1069
Query: 364 ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVG------ 417
E EE +E G+D+ E +KE+ EGE+M + E +EE E+ L ++N G
Sbjct: 1070 EDEEAEVEKDTGEDEEEE---DKEEEEGEEMEEDEGKAEEEQELE-LEEENEEGVEEEEE 1125
Query: 418 ---EPSLRPCHNRDRKGIDCEQVKE------DEGEEEEHEQEEEEEDDVEEDE 461
E + + +G + E+ +E +EGEEE+ EQEEEEE EE+E
Sbjct: 1126 EIEEEEVEGADEEEGEGAEEEEGEESQKEEKEEGEEEKREQEEEEEGGEEEEE 1178
Score = 72.4 bits (176), Expect = 4e-11
Identities = 61/159 (38%), Positives = 81/159 (50%), Gaps = 35/159 (22%)
Query: 310 VEVEGEGEEGVV-KDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEH 368
VE+ GE EE V KD E+ E +D+EEEE + +DE G EE Q ELEE
Sbjct: 1065 VELGGEDEEAEVEKDTGEDEEEEDKEEEEGEEMEEDE---------GKAEEEQELELEEE 1115
Query: 369 NIE-LSLGQDKVETLPVE---KEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
N E + ++++E VE +E+GEG + + E+S+KEE E GE R
Sbjct: 1116 NEEGVEEEEEEIEEEEVEGADEEEGEGAEEEEGEESQKEEKEE---------GEEEKR-- 1164
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
EQ +E+EG EEE E EE EE EEDE +
Sbjct: 1165 ----------EQEEEEEGGEEEEEVEEVEEGGNEEDEDE 1193
Score = 50.1 bits (118), Expect = 2e-04
Identities = 35/95 (36%), Positives = 51/95 (52%), Gaps = 7/95 (7%)
Query: 273 MLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKD 332
M E E KA +E + ++ + +E+ EE EVEG EE EEEEGE
Sbjct: 1097 MEEDEGKAEEEQELELEEENEEGVEEEEEEIEEE----EVEGADEEEGEGAEEEEGEESQ 1152
Query: 333 EEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
+EE+E+G K E + + + GG EE +V+E+EE
Sbjct: 1153 KEEKEEGEEEKREQE---EEEEGGEEEEEVEEVEE 1184
Score = 46.6 bits (109), Expect = 0.003
Identities = 35/111 (31%), Positives = 60/111 (53%), Gaps = 5/111 (4%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + KE E + E EG+ EE + EEE E EEEEE+ + ++EV+G+ + + G
Sbjct: 1085 EEEDKEEEEGEEMEEDEGKAEEEQELELEEENEEGVEEEEEE--IEEEEVEGADEEEGEG 1142
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMD-FEQSKKEETE 406
EE + +E ++ E G+++ E+E GE E+ ++ E+ EE E
Sbjct: 1143 AEEEEGEESQKE--EKEEGEEEKREQEEEEEGGEEEEEVEEVEEGGNEEDE 1191
Score = 46.2 bits (108), Expect = 0.003
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDE---EEEEDGVVVKDEVDGSGDVKMGGVEENQ 361
EE +E+E E EEGV ++EEE E + E EEE +G ++ + + K G EE +
Sbjct: 1105 EEEQELELEEENEEGVEEEEEEIEEEEVEGADEEEGEGAEEEEGEESQKEEKEEGEEEKR 1164
Query: 362 VQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
QE EE E ++VE E+++ EG ++
Sbjct: 1165 EQEEEEEGGEEEEEVEEVEEGGNEEDEDEGSEL 1197
Score = 44.3 bits (103), Expect = 0.013
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 25/162 (15%)
Query: 313 EGEG---EEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDG--SGDVKMGGVEENQVQELEE 367
E EG E+G ++ + KD E +++G E++G + D + +E ++ L E
Sbjct: 957 ENEGYCYEDGEIQKSIKTENIKDLELQKEG----SEIEGMQATDSEKEYIEAIDIKSLNE 1012
Query: 368 HNI--ELSLGQDK-VETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
E +DK +ET K GE + + E S K+ETE Q N + +
Sbjct: 1013 EETYSEAKFDEDKQLET----KNDGESNEEQESEDSVKDETEKESGCQLNETVDSEV--- 1065
Query: 425 HNRDRKGIDCE-QVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ G D E +V++D GE+EE +E++EE++ EE E D G
Sbjct: 1066 ---ELGGEDEEAEVEKDTGEDEE--EEDKEEEEGEEMEEDEG 1102
>ref|NP_703434.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23504575|emb|CAD51454.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 3134
Score = 72.4 bits (176), Expect = 4e-11
Identities = 53/170 (31%), Positives = 85/170 (49%), Gaps = 19/170 (11%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
EVE E EE + DEEE+ E +D+EEEE+ V+D+ + D ++ EE + EE
Sbjct: 2494 EVEEEVEEEIEDDEEEDEEIEDDEEEEEDEEVEDDEEEEEDEEVDDEEEEVEESDEEVEC 2553
Query: 371 ELSLGQDKVETLPVEKEQGE-------------GEQMMDFEQSKKEETEMWFLGQKNYVG 417
+ + D+ E V+ E+ E E+ + E ++EE E+ + N G
Sbjct: 2554 DEEVDDDEEEEEEVDDEEEEEEVEESDEEVEDDEEEEEELEDGEEEEEEL----EDNEEG 2609
Query: 418 EPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEE--EEDDVEEDEHDVG 465
+ + + E+V+ DE EEEE + +EE EE+D EED+ +VG
Sbjct: 2610 DEEVDDEEEEEEVEESDEEVEVDEEEEEELDGDEEGDEEEDNEEDDEEVG 2659
Score = 70.5 bits (171), Expect = 2e-10
Identities = 52/167 (31%), Positives = 92/167 (54%), Gaps = 17/167 (10%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E+ +E EVE E +E V DEEEE E +D EEEE+ + +E D D
Sbjct: 2561 EEEEEEVDDEEEEEEVE-ESDEEVEDDEEEEEELEDGEEEEEELEDNEEGDEEVD----- 2614
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
+E + +E+EE + E+ + ++ E+E+ +G++ D E+ +E+ E +G +
Sbjct: 2615 -DEEEEEEVEESDEEVEVDEE-------EEEELDGDEEGDEEEDNEEDDEE--VGDEEEE 2664
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E D +G + E+++ DE EEEE E+ +EEE++++ DE D
Sbjct: 2665 EEVEESDEEVEDDEGEE-EELEGDEEEEEEVEESDEEEEELDSDEED 2710
Score = 70.5 bits (171), Expect = 2e-10
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 20/159 (12%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
EE V+ E E EE DEE E + ++EEE EDG ++E++ + + G EE +E
Sbjct: 2562 EEEEEVDDEEEEEEVEESDEEVEDDEEEEEELEDGEEEEEELEDNEE----GDEEVDDEE 2617
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
EE E+ ++VE E+E+ +G++ D E+ +E+ E VG+
Sbjct: 2618 EEE---EVEESDEEVEVDEEEEEELDGDEEGDEEEDNEEDDE--------EVGDE----- 2661
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ E+V++DEGEEEE E +EEEE++VEE + +
Sbjct: 2662 EEEEEVEESDEEVEDDEGEEEELEGDEEEEEEVEESDEE 2700
Score = 63.2 bits (152), Expect = 3e-08
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEE-----GEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEE 359
E+ V + E E E+ V DEEEE E + +EE +D ++EVD + + +
Sbjct: 2521 EDEEVEDDEEEEEDEEVDDEEEEVEESDEEVECDEEVDDDEEEEEEVDDEEEEEEVEESD 2580
Query: 360 NQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEP 419
+V++ EE EL G+++ E L ++ EG++ +D E+ ++E E + + E
Sbjct: 2581 EEVEDDEEEEEELEDGEEEEEEL---EDNEEGDEEVDDEEEEEEVEESDEEVEVDEEEEE 2637
Query: 420 SLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
L D + D E+ E+ G+EEE E+ EE +++VE+DE
Sbjct: 2638 ELDGDEEGDEEE-DNEEDDEEVGDEEEEEEVEESDEEVEDDE 2678
Score = 59.3 bits (142), Expect = 4e-07
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 278 LKATHLEECYYASHLQHLIKSQHKELFEETL---VVEVEGE------------GEEGVVK 322
LK+ HL + + H I + H +E ++ E E G+E +
Sbjct: 2430 LKSDHLNQAHEIKHNVKQIYTTHNMFCKEGEAYNMINKEKESKKKNGKKIFMRGDEELKD 2489
Query: 323 DEEEEGEAKDEE-----EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQD 377
+EEEE E + EE EEED + DE + + EE + +E+++ E+ +
Sbjct: 2490 NEEEEVEEEVEEEIEDDEEEDEEIEDDEEEEEDEEVEDDEEEEEDEEVDDEEEEVEESDE 2549
Query: 378 KVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQV 437
+VE + E E+ +D E+ ++E E + + E L + + D E+
Sbjct: 2550 EVECDEEVDDDEEEEEEVDDEEEEEEVEESDEEVEDDEEEEEELEDGEEEEEELEDNEEG 2609
Query: 438 KEDEGEEEEHEQEEEEEDDVEEDEHD 463
E+ +EEE E+ EE +++VE DE +
Sbjct: 2610 DEEVDDEEEEEEVEESDEEVEVDEEE 2635
Score = 58.2 bits (139), Expect = 8e-07
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 301 KELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEEN 360
+E+ +E EVE EE V +EEEE DEE +E +E + D ++G EE
Sbjct: 2611 EEVDDEEEEEEVEESDEEVEVDEEEEEELDGDEEGDE------EEDNEEDDEEVGDEEEE 2664
Query: 361 QVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPS 420
+ E + +E G++ E+ +G+ E+ + E+S +EE E+ + N +
Sbjct: 2665 EEVEESDEEVEDDEGEE-------EELEGDEEEEEEVEESDEEEEELDSDEEDNEEDDEE 2717
Query: 421 LRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
D + ++ +++ DE EEEE + EE ++++E+ E
Sbjct: 2718 EEDLEVEDDEDVEEGELEGDEEEEEELKDGEESDEELEDSE 2758
Score = 52.0 bits (123), Expect = 6e-05
Identities = 46/172 (26%), Positives = 83/172 (47%), Gaps = 16/172 (9%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEE--EEGEAKDEEEEEDGVVVKDEVDGSG-DVK 353
+ + +E+ E VEV+ E EE + DEE EE + ++++EE ++EV+ S +V+
Sbjct: 2616 EEEEEEVEESDEEVEVDEEEEEELDGDEEGDEEEDNEEDDEEVGDEEEEEEVEESDEEVE 2675
Query: 354 MGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGE--GEQMMDFEQSKKEETEMWFLG 411
EE +++ EE E+ ++ E L ++E E E+ D E E+ E
Sbjct: 2676 DDEGEEEELEGDEEEEEEVEESDEEEEELDSDEEDNEEDDEEEEDLEVEDDEDVE----- 2730
Query: 412 QKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E L + + D E+ E+ + EE ++E E+ +D EE+ H+
Sbjct: 2731 ------EGELEGDEEEEEELKDGEESDEELEDSEESDEEVEDVEDNEEEIHE 2776
Score = 48.1 bits (113), Expect = 9e-04
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 37/181 (20%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKD---EEEEEDGVVVKDEVDGSGDVK 353
+ ++E EE E E E EE + E++EGE ++ +EEEE+ V DE + D
Sbjct: 2648 EEDNEEDDEEVGDEEEEEEVEESDEEVEDDEGEEEELEGDEEEEEEVEESDEEEEELD-- 2705
Query: 354 MGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQK 413
E+N+ + EE ++E+ +D VE +E ++ E E++ D E+S +E
Sbjct: 2706 -SDEEDNEEDDEEEEDLEVEDDED-VEEGELEGDEEEEEELKDGEESDEE---------- 2753
Query: 414 NYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDV--------EEDEHDVG 465
D + D E ++ EEE HE +EED V EE++ ++
Sbjct: 2754 ------------LEDSEESDEEVEDVEDNEEEIHEYYCKEEDTVMKQPYNTFEEEKTNIS 2801
Query: 466 F 466
F
Sbjct: 2802 F 2802
>ref|NP_179030.2| hypothetical protein [Arabidopsis thaliana]
Length = 847
Score = 71.6 bits (174), Expect = 7e-11
Identities = 56/201 (27%), Positives = 96/201 (46%), Gaps = 16/201 (7%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEE---DGVVVKDEVDGSGDVKMGGVEENQVQE--- 364
E+EGE E+ +EEEG+ K+EE+ E D K E+ GD +M G EE Q +E
Sbjct: 475 EMEGEEEK-----QEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKE 529
Query: 365 LEEHNIEL--SLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLR 422
EE +E G +K E E+ EGE+ E+ K+EE E + K++ ++
Sbjct: 530 EEEEKVEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKICVEYKDHHSTCNVE 589
Query: 423 PCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGTG 482
++ E+++ +EG+EE+ E+ +E D +++ + + S + P+
Sbjct: 590 ETEKQENPKQGDEEMEREEGKEEKVEEHDEYNDAADQEAY---INLSDDEDNDTAPTEKE 646
Query: 483 SSIQAMEAVQMPFGSGIHLHD 503
S Q E ++P + HD
Sbjct: 647 SQPQKEETTEVPKEENVEEHD 667
Score = 64.7 bits (156), Expect = 9e-09
Identities = 57/189 (30%), Positives = 87/189 (45%), Gaps = 42/189 (22%)
Query: 309 VVEVEGEGEEGVVK-------DEEEEG-------EAKDEEEEE-----DGVVVKDEVDGS 349
V +E G+EG K DEE EG E K+EEEE+ D K E+
Sbjct: 412 VPAIEYRGDEGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQ 471
Query: 350 GDVKMGGVEENQVQ---ELEEHNIELSLGQDKVETLPVEK---EQGEGEQMMDFEQSKKE 403
GD +M G EE Q + E EE +E G ++ E + K E+ EGE+ E+ K+E
Sbjct: 472 GDEEMEGEEEKQEEEGKEKEEEKVEYR-GDEETEKQEIPKQGDEEMEGEEEKQEEEGKEE 530
Query: 404 ETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E E + Y G+ +G + +++ + EE E E+E++EE+ EE+E
Sbjct: 531 EEE-----KVEYRGD-----------EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEK 574
Query: 464 VGFHFSTKH 472
+ + H
Sbjct: 575 ICVEYKDHH 583
Score = 63.2 bits (152), Expect = 3e-08
Identities = 55/174 (31%), Positives = 86/174 (48%), Gaps = 28/174 (16%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEE------DGVVVKDEVDGSGDVKMGGVE 358
E T E+ +G+E + +EE++ E EEEEE D K E+ GD +M G E
Sbjct: 421 EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEE 480
Query: 359 ENQVQE---LEEHNIELSLGQDKVETLPVEK---EQGEGEQMMDFEQSKKEETEMWFLGQ 412
E Q +E EE +E G ++ E + K E+ EGE+ E+ K+EE E +
Sbjct: 481 EKQEEEGKEKEEEKVEYR-GDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEEEE-----K 534
Query: 413 KNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDD----VEEDEH 462
Y G+ +++ I + +E EGEEE+ E+E +EE++ VE +H
Sbjct: 535 VEYRGD------EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKICVEYKDH 582
Score = 38.5 bits (88), Expect = 0.69
Identities = 36/159 (22%), Positives = 67/159 (41%), Gaps = 29/159 (18%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
E T E+ +G+E + +EE++ E EEEEE V + + +V+ +EN Q
Sbjct: 541 EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKICVEYKDHHSTCNVEETEKQENPKQG 600
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
EE +E+E+G+ E++ + ++ + ++ +
Sbjct: 601 DEE----------------MEREEGKEEKVEEHDEYNDAADQEAYINLSD---------- 634
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
D KE + ++EE + +EE+ E DEHD
Sbjct: 635 ---DEDNDTAPTEKESQPQKEETTEVPKEENVEEHDEHD 670
Score = 37.7 bits (86), Expect = 1.2
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 375 GQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDC 434
G +K E E+ EGE+ E+ K+EE E + Y G+ +G +
Sbjct: 422 GTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEE-----KVEYRGD-----------EGTEK 465
Query: 435 EQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGTGSSIQAMEAVQ 492
+++ + EE E E+E++EE+ E++E V + + + +P ++ E Q
Sbjct: 466 QEIPKQGDEEMEGEEEKQEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQ 523
>gb|AAX49609.1| RPGR [Sus scrofa]
Length = 578
Score = 71.2 bits (173), Expect = 1e-10
Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 13/179 (7%)
Query: 315 EGEEGVVKDEEEEGEAKDEE-EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELS 373
EG+EG ++EE +GE ++EE EEE+G E +G + GG EE + QE EE E
Sbjct: 343 EGQEGEEEEEEGDGEGQEEEGEEEEGGEEGQEGEGEEEEGDGGGEEEEEQEGEEEGGEEE 402
Query: 374 LGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGID 433
GQ++ E E+E+GEGE+ EQ EE G+ GE + +G
Sbjct: 403 GGQEEEEE-GGEEEEGEGEEE---EQGGGEE------GEGEGEGEEEEGEGEEEEGEGGG 452
Query: 434 CEQVKE-DEGE-EEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGTGSSIQAMEA 490
+ KE D GE +EE ++ EEEE++ EED+ + G + T + G G ++ +A
Sbjct: 453 RAREKERDVGERKEEEKRREEEEEEEEEDKDETGKYQETGNAEGERQGGQGGGRESKKA 511
Score = 60.8 bits (146), Expect = 1e-07
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEE--------EEEDGVVVKDEVDGSGDVKMGGVEENQV 362
E +GEG+EG +EE +GE ++ E E ++G ++E DG G GG EE
Sbjct: 266 EGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEENG 325
Query: 363 Q------ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
+ E EE E GQ+ E E+E+G+GE ++EE E G++
Sbjct: 326 EGQEGEGEEEEEEGERDEGQEGEE----EEEEGDGE-------GQEEEGEEEEGGEEGQE 374
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEED 460
GE + + EQ E+EG EEE QEEEEE EE+
Sbjct: 375 GEGEEEEGDGGGEE--EEEQEGEEEGGEEEGGQEEEEEGGEEEE 416
Score = 60.5 bits (145), Expect = 2e-07
Identities = 59/185 (31%), Positives = 86/185 (45%), Gaps = 26/185 (14%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE + EG+ EEG ++ EEG+ + EEEE GD GG
Sbjct: 341 RDEGQEGEEEEEEGDGEGQEEEGEEEEGGEEGQEGEGEEEE------------GD---GG 385
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
EE + QE EE E GQ++ E E+E+GEGE+ EQ EE G+
Sbjct: 386 GEEEEEQEGEEEGGEEEGGQEEEEE-GGEEEEGEGEEE---EQGGGEE------GEGEGE 435
Query: 417 GEPSLRPCHNRDRKGIDCEQVKE-DEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLE 475
GE + +G + KE D GE +E E+ EEE++ EE++ D + + E
Sbjct: 436 GEEEEGEGEEEEGEGGGRAREKERDVGERKEEEKRREEEEEEEEEDKDETGKYQETGNAE 495
Query: 476 GMPSG 480
G G
Sbjct: 496 GERQG 500
Score = 55.1 bits (131), Expect = 7e-06
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQ------E 364
E GEG+EG +EE +GE ++ EE E +E DG G GG EE + E
Sbjct: 182 EGHGEGQEGEGGEEEGDGEGQEGEEGE------EEGDGEGQEGEGGEEEGDGEGQEGEGE 235
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGE-GEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
EE + E G+ + E E+++GE GE+ D E + E E G+ GE
Sbjct: 236 EEEGDGEGQEGEGEEEEGDGERQEGEGGEEEGDGEGQEGEGGEEEGDGE-GQEGEGGEEE 294
Query: 424 CHNRDRKGIDCEQVKEDEGEEEEHEQEEEE--------EDDVEEDEHDVG 465
++G E+ + EG+E E +EEE E++ EE E D G
Sbjct: 295 GDGEGQEGEGGEEEGDGEGQEGEGGEEEENGEGQEGEGEEEEEEGERDEG 344
Score = 54.7 bits (130), Expect = 9e-06
Identities = 47/154 (30%), Positives = 71/154 (45%), Gaps = 11/154 (7%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELE-EHN 369
E +GEG+EG +EE +GE ++ E EE+ E DG G G EE + E E
Sbjct: 210 EGDGEGQEGEGGEEEGDGEGQEGEGEEE------EGDGEGQEGEGEEEEGDGERQEGEGG 263
Query: 370 IELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDR 429
E G+ + E+ GEG++ E+ E + G++ GE +
Sbjct: 264 EEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEE 323
Query: 430 KGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
G + +E EGEEEE E E +E + EE+E +
Sbjct: 324 NG----EGQEGEGEEEEEEGERDEGQEGEEEEEE 353
Score = 53.5 bits (127), Expect = 2e-05
Identities = 47/153 (30%), Positives = 71/153 (45%), Gaps = 20/153 (13%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEE---EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHN 369
EGEGEE E +EGE ++EE E ++G ++E DG G GG EE + E
Sbjct: 231 EGEGEEEEGDGEGQEGEGEEEEGDGERQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEG 290
Query: 370 IELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDR 429
E E+ GEG++ E+ E + G++ GE +
Sbjct: 291 GE-------------EEGDGEGQEGEGGEEEGDGEGQEGEGGEEEENGEGQEGEGEEEEE 337
Query: 430 KGIDCEQVKEDEGEEEEHEQE-EEEEDDVEEDE 461
+G E+ + EGEEEE E + E +E++ EE+E
Sbjct: 338 EG---ERDEGQEGEEEEEEGDGEGQEEEGEEEE 367
Score = 53.1 bits (126), Expect = 3e-05
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E +GEG+EG ++EE +GE ++ E EE+ E DG GG EE + E
Sbjct: 224 EGDGEGQEGEGEEEEGDGEGQEGEGEEE------EGDGERQEGEGGEEEGDGEGQEGEG- 276
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
G+++ + E E GE E + ++ + E E GQ+ GE + ++
Sbjct: 277 ----GEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGGEEEE---NGEGQE 329
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
G E+ +E E +E + +EEEEE D E E +
Sbjct: 330 GEGEEEEEEGERDEGQEGEEEEEEGDGEGQEEE 362
Score = 51.6 bits (122), Expect = 8e-05
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 31/212 (14%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAK--- 331
EKE + E+ + + + + +E + E GE EEG ++EEEEGE +
Sbjct: 104 EKEREQKEREQGRQKERNKGMKEGEEEEQGRDRREEEEGGEEEEGEGEEEEEEGEEEQEG 163
Query: 332 -----DEEEEEDGVVVKDEVDGSGDVKMGGVEE--NQVQELEEHNIELSLGQDKVETLPV 384
+E EE +G ++E G G GG EE + QE EE G+++ +
Sbjct: 164 EGEEVEEGEEREGEGGEEEGHGEGQEGEGGEEEGDGEGQEGEE-------GEEEGDGEGQ 216
Query: 385 EKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEE 444
E E GE E + ++ + EE E GQ+ GE ++G E+ + EG+E
Sbjct: 217 EGEGGEEEGDGEGQEGEGEEEEGDGEGQE---GEGEEEEGDGERQEGEGGEEEGDGEGQE 273
Query: 445 EEHEQEE-----------EEEDDVEEDEHDVG 465
E +EE EEE D E E + G
Sbjct: 274 GEGGEEEGDGEGQEGEGGEEEGDGEGQEGEGG 305
Score = 47.0 bits (110), Expect = 0.002
Identities = 55/198 (27%), Positives = 78/198 (38%), Gaps = 30/198 (15%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQ--- 361
EE +E G E+ +EEEE E ++ + V +DE G+ ++ E +
Sbjct: 6 EEEADLEGNGVEEQEREANEEEEAELLSDDLSDRPEVSEDEGKPGGETELSPEGEGEGIR 65
Query: 362 --------VQELEEHNIELSLGQDKVETL---------PVEKEQGEGEQMMDFEQSKKEE 404
V+ EE E G+++ E L E+EQ E EQ E++K
Sbjct: 66 KESNSGVEVRRSEEGEEEKGKGEEETERLGSGEKDLEEEKEREQKEREQGRQKERNK--- 122
Query: 405 TEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDV 464
G K E R + G + E E+E EE E EQE E E +VEE E
Sbjct: 123 ------GMKEGEEEEQGRDRREEEEGGEEEEGEGEEEEEEGEEEQEGEGE-EVEEGEERE 175
Query: 465 GFHFSTKHHLEGMPSGTG 482
G + H EG G
Sbjct: 176 GEGGEEEGHGEGQEGEGG 193
Score = 43.9 bits (102), Expect = 0.016
Identities = 45/156 (28%), Positives = 72/156 (45%), Gaps = 16/156 (10%)
Query: 313 EGEGEEGVVKDEEEE-GEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQEL-EEHNI 370
EGE E+G ++E E G + + EEE K+ G + G++E + +E +
Sbjct: 79 EGEEEKGKGEEETERLGSGEKDLEEEKEREQKEREQGRQKERNKGMKEGEEEEQGRDRRE 138
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKK-EETEMWFLGQKNYVGEPSLRPCHNRDR 429
E G+++ E+E+GE EQ + E+ ++ EE E GE H +
Sbjct: 139 EEEGGEEEEGEGEEEEEEGEEEQEGEGEEVEEGEERE----------GEGGEEEGHGEGQ 188
Query: 430 KGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+G E+ + EG+E E E EEE D E E + G
Sbjct: 189 EGEGGEEEGDGEGQEGE---EGEEEGDGEGQEGEGG 221
>gb|AAX49605.1| RPGR [Gorilla gorilla]
Length = 549
Score = 70.5 bits (171), Expect = 2e-10
Identities = 53/153 (34%), Positives = 77/153 (49%), Gaps = 2/153 (1%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EGE E+G + EEEEGE K EEE E+G + E +G + + G EE + + EE
Sbjct: 250 EWEGEEEKGEGEGEEEEGEGKGEEEGEEGEEEEGEGEGEEEGEGEGEEEGEGEGEEEEG- 308
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
G+++ E E E+ EGE + + + EE E + G++ + +
Sbjct: 309 -EGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEEGE 367
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
G E+ E EGEEEE E E EEE+ EE E +
Sbjct: 368 GEGEEEEGEGEGEEEEGEGEGEEEEGEEEGEEE 400
Score = 66.6 bits (161), Expect = 2e-09
Identities = 63/181 (34%), Positives = 88/181 (47%), Gaps = 9/181 (4%)
Query: 311 EVEGEGEE-GVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG---GVEENQVQELE 366
E EGEGEE G + EEEEGE K EEE E+G +E +G G+ + G G EE E E
Sbjct: 290 EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGE 349
Query: 367 EHNIE---LSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
E E G+ + E+E+GEGE + + + EE E G++ GE
Sbjct: 350 EEEGEGEGEEEGEGEEGEGEGEEEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEGEGEG 409
Query: 424 CHNRDRKG-IDCE-QVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGT 481
+ +G ++ E + +E EGE EE E EEE E+ +E E + + EG T
Sbjct: 410 EGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEGKYQET 469
Query: 482 G 482
G
Sbjct: 470 G 470
Score = 64.7 bits (156), Expect = 9e-09
Identities = 51/156 (32%), Positives = 78/156 (49%), Gaps = 19/156 (12%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EGEGEEG + EEEEGE + EEEE +G ++E + G+ + G E + + EE
Sbjct: 358 EEEGEGEEGEGEGEEEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEGEGEGEGEEEEEG 417
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
E+ G+ VE E+GEGE + + + EE E G++N R+R+
Sbjct: 418 EVE-GE-------VEGEEGEGEGEEEEGEEEGEEREKEGEGEEN-----------RRNRE 458
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGF 466
+ E ++ GEEE Q+ EE V + + V +
Sbjct: 459 EEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKY 494
Score = 62.8 bits (151), Expect = 3e-08
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 313 EGEGEEGVVKDEEE-EGEAKDEEEEED--GVVVKDEVDGSGDVKMG----GVEENQVQEL 365
EGE EEG ++EEE EGE K+E E E+ G K+E + + + G G EE E
Sbjct: 153 EGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEG 212
Query: 366 EEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCH 425
EE E G++K E VE+ +GE E+ + + ++EE E GE
Sbjct: 213 EEEETE-GRGEEKEEGGEVEEGKGEREEEEEEGEGEEEEWE----------GEEEKGEGE 261
Query: 426 NRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ +G + + +EGEEEE E E EEE + E +E G
Sbjct: 262 GEEEEGEGKGEEEGEEGEEEEGEGEGEEEGEGEGEEEGEG 301
Score = 61.2 bits (147), Expect = 1e-07
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 310 VEVEGEGEEGVVKDEEEEG-EAKDEEEEEDGVVVKDEVDGSGDVK-MGGVEENQVQELEE 367
VE E E EEG K EE G E K EEE + G ++E +G G+ K GG E E EE
Sbjct: 180 VEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEEGKGEREE 239
Query: 368 HNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNR 427
E G+ + E E+E+GEGE + + K EE + GE
Sbjct: 240 EEEE---GEGEEEEWEGEEEKGEGEGEEEEGEGKGEE--------EGEEGEEEEGEGEGE 288
Query: 428 DRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ + E+ E EGEEEE E + EEE + E E
Sbjct: 289 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE 322
Score = 60.5 bits (145), Expect = 2e-07
Identities = 60/174 (34%), Positives = 84/174 (47%), Gaps = 18/174 (10%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG-GVEENQVQELEEHN 369
E EGEGE+G + EEEEGE E EEE+G + E +G G+ G G EE E EE
Sbjct: 327 EGEGEGEDGEGEGEEEEGEW--EGEEEEG-EGEGEEEGEGEEGEGEGEEEEGEGEGEEEE 383
Query: 370 IELSLGQDKVETLPVE-KEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRD 428
E G+ + E E +E+GEGE + E ++EE E+ + GE +
Sbjct: 384 GE---GEGEEEEGEEEGEEEGEGEGEGEGEGEEEEEGEV----EGEVEGEEGEGEGEEEE 436
Query: 429 RKGIDCEQVKEDEGEEEEHEQEEEEED------DVEEDEHDVGFHFSTKHHLEG 476
+ E+ KE EGEE +EEEEE+ EE+E G + ++G
Sbjct: 437 GEEEGEEREKEGEGEENRRNREEEEEEGKYQETGEEENERQDGEEYKKVSKIKG 490
Score = 60.5 bits (145), Expect = 2e-07
Identities = 53/161 (32%), Positives = 76/161 (46%), Gaps = 19/161 (11%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EG GEE E EEG+ + EEEEE+G ++E +G + G EE + +
Sbjct: 216 ETEGRGEEKEEGGEVEEGKGEREEEEEEGEGEEEEWEGEEEKGEGEGEEEEGE------- 268
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFE-----QSKKEETEMWFLGQK-----NYVGEPS 420
G+++ E E+ +GEGE+ + E + + EE E G++ GE
Sbjct: 269 --GKGEEEGEEGEEEEGEGEGEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEE 326
Query: 421 LRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
D +G E+ E EGEEEE E E EEE + EE E
Sbjct: 327 EGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEEGE 367
Score = 57.4 bits (137), Expect = 1e-06
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 310 VEVEGEGEEGVVKDEE---EEGEAKDEEEEEDGVVVK---DEVDGSGDVKMG-GVEENQV 362
+E GEGE+ + + EE +GE ++++E E G + + +G G+ + G G EE
Sbjct: 101 MERPGEGEKELAEKEEWKKRDGEGQEQKEREQGHQKERNQEMEEGGGEEEHGEGEEEEGD 160
Query: 363 QELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLR 422
+E EE + + E + E+E+ EGE+ + K+E+ E ++ GE
Sbjct: 161 REEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGE-----EEGDQGEGEEE 215
Query: 423 PCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
R + + +V+E +GE EE E+E E E++ E E + G
Sbjct: 216 ETEGRGEEKEEGGEVEEGKGEREEEEEEGEGEEEEWEGEEEKG 258
Score = 57.0 bits (136), Expect = 2e-06
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
EG GEE + EEEEG+ ++EEE+E + + +G G+ G E + +E E E
Sbjct: 144 EGGGEEEHGEGEEEEGDREEEEEKEG----EGKEEGEGEEVEG---EREKEEGERKKEER 196
Query: 373 SLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGI 432
+ ++K E E +QGEGE+ EETE G+ GE + KG
Sbjct: 197 AGKEEKGEE---EGDQGEGEE---------EETE----GR----GEEKEEGGEVEEGKGE 236
Query: 433 DCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
E+ +E EGEEEE E EEE+ + E+E G
Sbjct: 237 REEEEEEGEGEEEEWEGEEEKGEGEGEEEEGEG 269
Score = 54.3 bits (129), Expect = 1e-05
Identities = 58/198 (29%), Positives = 83/198 (41%), Gaps = 39/198 (19%)
Query: 296 IKSQHKELFEETLVVEVEGEGEEGVVKD------EEEEGEAKDEEEEEDGVVVKDEVDGS 349
I+ Q E EE + V + + ++ D E EG+AK E EDG E G
Sbjct: 16 IEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDG----PEGRGD 71
Query: 350 GDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGE-QMMDFEQSKKEETEMW 408
G + G Q+ E E G+ ++E GEGE ++ + E+ KK + E
Sbjct: 72 GTCEEGSSGAEHWQDEEREKGEKDKGRGEME------RPGEGEKELAEKEEWKKRDGE-- 123
Query: 409 FLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHF 468
GQ+ E H ++R Q E+ G EEEH + EEEE D EE+E G
Sbjct: 124 --GQEQKEREQG----HQKERN-----QEMEEGGGEEEHGEGEEEEGDREEEEEKEG--- 169
Query: 469 STKHHLEGMPSGTGSSIQ 486
EG G G ++
Sbjct: 170 ------EGKEEGEGEEVE 181
Score = 46.2 bits (108), Expect = 0.003
Identities = 43/124 (34%), Positives = 59/124 (46%), Gaps = 13/124 (10%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVV-----KDEVDGSGDVKMGGVEE 359
EE VE E EGEEG + EEEEGE + EE E++G ++E + G + G EE
Sbjct: 414 EEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEGKYQETGEEE 473
Query: 360 NQVQELEEH----NIELSLGQDKVETL---PVEKEQGEG-EQMMDFEQSKKEETEMWFLG 411
N+ Q+ EE+ I+ S+ K +T V QG G EQ K+ E G
Sbjct: 474 NERQDGEEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQRSKMPVQSKQLLENGPSG 533
Query: 412 QKNY 415
K +
Sbjct: 534 SKKF 537
Score = 39.3 bits (90), Expect = 0.40
Identities = 36/94 (38%), Positives = 47/94 (49%), Gaps = 11/94 (11%)
Query: 305 EETLVVEVEGEGE-EGVVKDEEE---EGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEEN 360
EE E EGEGE EG ++EEE EGE + EE E +G + E +G K G EEN
Sbjct: 394 EEEGEEEGEGEGEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 453
Query: 361 QVQELEEHNIELSLGQDKV-ETLPVEKEQGEGEQ 393
+ EE + K ET E E+ +GE+
Sbjct: 454 RRNREEEEE------EGKYQETGEEENERQDGEE 481
Score = 39.3 bits (90), Expect = 0.40
Identities = 49/182 (26%), Positives = 77/182 (41%), Gaps = 35/182 (19%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
EG G+ G ++ E +EE E G KD+ G G+++ G E ++ E EE
Sbjct: 67 EGRGD-GTCEEGSSGAEHWQDEEREKGE--KDK--GRGEMERPGEGEKELAEKEEWKKRD 121
Query: 373 SLGQDK--------------VETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGE 418
GQ++ +E E+E GEGE+ E ++EE E G++ GE
Sbjct: 122 GEGQEQKEREQGHQKERNQEMEEGGGEEEHGEGEEE---EGDREEEEEKEGEGKEEGEGE 178
Query: 419 PSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMP 478
++ E+ KE EGE ++ E+ +EE EE + G T+ E
Sbjct: 179 E------------VEGEREKE-EGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE 225
Query: 479 SG 480
G
Sbjct: 226 EG 227
Score = 35.8 bits (81), Expect = 4.5
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAK------DEEEEEDGVVVKDEVDGSG 350
+ + +E EE E EGEGEE EEEE E K +E E +DG K G
Sbjct: 431 EGEEEEGEEEGEEREKEGEGEENRRNREEEEEEGKYQETGEEENERQDGEEYKKVSKIKG 490
Query: 351 DVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQ 388
VK G + Q + + G+++ +PV+ +Q
Sbjct: 491 SVKYGKHKTYQKKSVTNTQ---GNGKEQRSKMPVQSKQ 525
>gb|AAM22073.1| retinitis pigmentosa GTPase regulator [Canis familiaris]
Length = 572
Score = 70.5 bits (171), Expect = 2e-10
Identities = 53/150 (35%), Positives = 75/150 (49%), Gaps = 7/150 (4%)
Query: 313 EGEGE-EGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIE 371
EGE E EG + EE EGE ++E EEE V + E +G G+V+ G EE +E E E
Sbjct: 278 EGEAEWEGKGEVEEGEGEVEEEGEEE---VEEGEGEGEGEVEEGEAEEEDAEEEEREVEE 334
Query: 372 LSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKG 431
G+ E+E+GE E+ E ++EE E G+ E +G
Sbjct: 335 EGEGEGNKREYEGEEEEGEEEER---ENEREEEEEGGEAGEGEEEEEGEAGQEEGEGEEG 391
Query: 432 IDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ +E EGEEEE +EEE E++ EE+E
Sbjct: 392 EEEVGEEEGEGEEEEEGEEEEGEEEGEEEE 421
Score = 68.2 bits (165), Expect = 8e-10
Identities = 67/209 (32%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEED----------GVVVKDEVDGSGDVKM 354
E L E EGE EEG K EE EGE + EEEE + G + E +G G+V+
Sbjct: 232 EGELEEEGEGELEEGEGKGEEREGELEGEEEEGEEEGEEKGEAGGEEGEAEWEGKGEVEE 291
Query: 355 GGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKN 414
G E +V+E E +E G+ + E E+GE E+ E +++EE E+ G+
Sbjct: 292 G---EGEVEEEGEEEVEEGEGEGEGEV-----EEGEAEE----EDAEEEEREVEEEGE-- 337
Query: 415 YVGEPSLRPCHNRDRKGIDCEQVKEDEGEEE-----EHEQEEEEEDDVEEDEHDVGFHFS 469
GE + R + +G + E+ E E EEE E E+EEE E EE E + G
Sbjct: 338 --GEGNKREYEGEEEEGEEEERENEREEEEEGGEAGEGEEEEEGEAGQEEGEGEEGEEEV 395
Query: 470 TKHHLEGMPSGTGSSIQAMEAVQMPFGSG 498
+ EG G + E + G G
Sbjct: 396 GEEEGEGEEEEEGEEEEGEEEGEEEEGEG 424
Score = 64.7 bits (156), Expect = 9e-09
Identities = 54/164 (32%), Positives = 86/164 (51%), Gaps = 20/164 (12%)
Query: 311 EVEGEGEE------GVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVK--MGGVEENQV 362
EVE EGEE G + E EEGEA++E+ EE+ V++E +G G+ + G EE +
Sbjct: 295 EVEEEGEEEVEEGEGEGEGEVEEGEAEEEDAEEEEREVEEEGEGEGNKREYEGEEEEGEE 354
Query: 363 QELEEHNIELSLGQDKVETLPVEKEQGE-GEQMMDFEQSKKEETEMWFLGQKNYVGEPSL 421
+E E E G + E E+E+GE G++ + E+ ++E E G++ GE
Sbjct: 355 EERENEREEEEEGGEAGE--GEEEEEGEAGQEEGEGEEGEEEVGEEEGEGEEEEEGE--- 409
Query: 422 RPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ +G + + +E EGEEE +E E E++V E+E G
Sbjct: 410 ------EEEGEEEGEEEEGEGEEEGRGREGEREEEVGEEEETEG 447
Score = 63.5 bits (153), Expect = 2e-08
Identities = 56/182 (30%), Positives = 85/182 (45%), Gaps = 39/182 (21%)
Query: 297 KSQHKELFEETLVVEVEGEGE------------------EGVVKDEEEEGEAKDEEEEED 338
+++ ++ EE VE EGEGE E ++EEE GEA + EEEE+
Sbjct: 319 EAEEEDAEEEEREVEEEGEGEGNKREYEGEEEEGEEEERENEREEEEEGGEAGEGEEEEE 378
Query: 339 GVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFE 398
G ++E +G + G EE + +E EE G+++ E+E+GEGE+
Sbjct: 379 GEAGQEEGEGEEGEEEVGEEEGEGEEEEE-------GEEEEGEEEGEEEEGEGEEEGRGR 431
Query: 399 QSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVE 458
+ ++EE VGE D++G E+ E+EGEE E E EE D E
Sbjct: 432 EGEREEE----------VGEEEETEGEG-DKEG---EEEGEEEGEEAEWGVREREEKDTE 477
Query: 459 ED 460
E+
Sbjct: 478 EE 479
Score = 63.5 bits (153), Expect = 2e-08
Identities = 52/158 (32%), Positives = 78/158 (48%), Gaps = 16/158 (10%)
Query: 315 EGEEGVVKDEEEEGEAK----DEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
EGEEG + +E+EGE + D EEEE+ K+E + + + G EE + +E EE
Sbjct: 126 EGEEGEEQRDEKEGEGRGGEEDREEEEEEEEGKEEGEWKEEGQGEGEEEGEEEEAEEKEE 185
Query: 371 ELSLGQDKVETLPVE-------KEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
E G ++ E E K +GEGE+ ++ + EE E G+ GE L
Sbjct: 186 EAEQGGEEGEGEEEEGGEGEGKKREGEGEEEGAEKEKEAEEVEEEGEGELEEEGEGEL-- 243
Query: 424 CHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ +G E+ E EGEEEE E+E EE+ + +E
Sbjct: 244 ---EEGEGKGEEREGELEGEEEEGEEEGEEKGEAGGEE 278
Score = 56.6 bits (135), Expect = 2e-06
Identities = 51/153 (33%), Positives = 75/153 (48%), Gaps = 19/153 (12%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIEL 372
E EG EG K E EGE + E+E++ V++E +G +EE ELEE
Sbjct: 198 EEEGGEGEGKKREGEGEEEGAEKEKEAEEVEEEGEGE-------LEEEGEGELEEGE--- 247
Query: 373 SLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGI 432
G+++ L E+E+GE E E +E W + GE + + +G
Sbjct: 248 GKGEEREGELEGEEEEGEEEGEEKGEAGGEEGEAEWEGKGEVEEGEGEV------EEEGE 301
Query: 433 DCEQVKEDEGE-EEEHEQEEEEEDDVEEDEHDV 464
E+V+E EGE E E E+ E EE+D EE+E +V
Sbjct: 302 --EEVEEGEGEGEGEVEEGEAEEEDAEEEEREV 332
Score = 54.7 bits (130), Expect = 9e-06
Identities = 51/165 (30%), Positives = 79/165 (46%), Gaps = 4/165 (2%)
Query: 299 QHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVE 358
+ +E EE + EGE +E + EEEGE ++ EE+E+ E +G G+ + GG
Sbjct: 146 EDREEEEEEEEGKEEGEWKEEGQGEGEEEGEEEEAEEKEEEAEQGGE-EGEGEEEEGGEG 204
Query: 359 ENQVQ--ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
E + + E EE E ++VE + + EGE ++ + K EE E G++
Sbjct: 205 EGKKREGEGEEEGAEKEKEAEEVEEEGEGELEEEGEGELEEGEGKGEEREGELEGEEEEG 264
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
E +G + E + E EE E E EEE E++VEE E
Sbjct: 265 EEEGEEKGEAGGEEG-EAEWEGKGEVEEGEGEVEEEGEEEVEEGE 308
Score = 50.8 bits (120), Expect = 1e-04
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 315 EGEEGVVKDEEEEGEAKDEE---EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIE 371
E EE + E E+G ++ E E+G +DE +G G GG E+ + +E EE
Sbjct: 103 EEEEAQEQREREQGHREERNKGTEGEEGEEQRDEKEGEG---RGGEEDREEEEEEE---- 155
Query: 372 LSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKG 431
+ K E E+ QGEGE+ + E+++++E E G++ E + R+G
Sbjct: 156 ----EGKEEGEWKEEGQGEGEEEGEEEEAEEKEEEAEQGGEEGEGEEEEGGEGEGKKREG 211
Query: 432 IDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ +E+ E+E+ +E EEE + E +E G
Sbjct: 212 ----EGEEEGAEKEKEAEEVEEEGEGELEEEGEG 241
Score = 45.4 bits (106), Expect = 0.006
Identities = 34/101 (33%), Positives = 54/101 (52%), Gaps = 1/101 (0%)
Query: 306 ETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQEL 365
E V E EGEGEE + EEEEGE + EEEE +G +G + ++G EE + +
Sbjct: 392 EEEVGEEEGEGEEEE-EGEEEEGEEEGEEEEGEGEEEGRGREGEREEEVGEEEETEGEGD 450
Query: 366 EEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETE 406
+E E ++ E E+E+ + E+ +E++ EE+E
Sbjct: 451 KEGEEEGEEEGEEAEWGVREREEKDTEEEGKYEETGDEESE 491
Score = 43.1 bits (100), Expect = 0.028
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 312 VEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIE 371
++ EG+ GV + + EEG+ EEE++ G ++ G +++ +E + +E + H E
Sbjct: 65 IQREGDSGVEQRQSEEGQ---EEEDKRGGEMEGLAKGEKNLEEEEAQEQRERE-QGHREE 120
Query: 372 LSLGQDKVETLPVEKE-QGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
+ G + E E +GEG + + ++EE E G+ G+
Sbjct: 121 RNKGTEGEEGEEQRDEKEGEGRGGEEDREEEEEEEEGKEEGEWKEEGQG----------- 169
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSGTGSSIQAME 489
+ E+ E+E EE+ E+ E+ ++ E +E + G K EG G +A E
Sbjct: 170 --EGEEEGEEEEAEEKEEEAEQGGEEGEGEEEEGGEGEGKKREGEGEEEGAEKEKEAEE 226
Score = 38.5 bits (88), Expect = 0.69
Identities = 40/182 (21%), Positives = 72/182 (38%), Gaps = 32/182 (17%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG----------------- 355
EG G E + E E +EE++ ++ D++ +V G
Sbjct: 12 EGSGIEEQEVEANENVEVPAGKEEKEIEILSDDLTDRAEVSEGKGKAGGGGEGIQREGDS 71
Query: 356 GVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNY 415
GVE+ Q +E +E + + + E+ E ++ + EQ +EE G++
Sbjct: 72 GVEQRQSEEGQEEEDKRGGEMEGLAKGEKNLEEEEAQEQREREQGHREERNKGTEGEE-- 129
Query: 416 VGEPSLRPCHNRDRKGIDCEQVKEDE------------GEEEEHEQEEEEEDDVEEDEHD 463
GE R G + + +E+E G+ E E+ EEEE + +E+E +
Sbjct: 130 -GEEQRDEKEGEGRGGEEDREEEEEEEEGKEEGEWKEEGQGEGEEEGEEEEAEEKEEEAE 188
Query: 464 VG 465
G
Sbjct: 189 QG 190
>gb|AAB53389.1| middle molecular weight neurofilament protein NF-M(1) [Xenopus
laevis]
Length = 897
Score = 69.7 bits (169), Expect = 3e-10
Identities = 59/200 (29%), Positives = 98/200 (48%), Gaps = 17/200 (8%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDE- 333
E+++KA EE + + +++ +E EE VE E E EEG ++E+EE A++E
Sbjct: 552 EEDVKADEKEEGEEEAEGE---EAKTEEGEEEGETVEEEAEKEEGGEEEEKEEVAAEEEG 608
Query: 334 ----------EEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKV--ET 381
E EED V+ E + + GG EE + +E +E ++ + K+ E
Sbjct: 609 GEGEEEGGEGETEEDKGEVEKEEEAETEEAEGGDEEATEEAQDEEVVEETMTETKIVREK 668
Query: 382 LPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDE 441
V+++ EGE+ D E+ +K+E E G+ E ++ EQ +E++
Sbjct: 669 AEVQEKAAEGEEKQDSEE-QKDEGEDEETGEGKEEAEEKEEGGEEKEDASEGTEQQEEEK 727
Query: 442 GEEEEHEQEEEEEDDVEEDE 461
EEE+ E EE E+D EDE
Sbjct: 728 AEEEKGESEEGAEEDAGEDE 747
Score = 56.2 bits (134), Expect = 3e-06
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 311 EVEGEGEEGVVKD--EEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEH 368
E +GE E V++ +EEE E K EE EE+G +E D D K G EE + +E +
Sbjct: 516 EEKGEDEAEAVEEGEKEEEEEEKGEEGEEEGGEQGEEEDVKADEKEEGEEEAEGEEAKTE 575
Query: 369 NIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRD 428
G+++ ET+ E E+ EG ++EE E ++ GE +
Sbjct: 576 E-----GEEEGETVEEEAEKEEG--------GEEEEKEEVAAEEEGGEGEEEGGEGETEE 622
Query: 429 RKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDV 464
KG E KE+E E EE E +EE + +DE V
Sbjct: 623 DKG---EVEKEEEAETEEAEGGDEEATEEAQDEEVV 655
Score = 53.9 bits (128), Expect = 2e-05
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 296 IKSQHK---ELFEETLVVEVEGEGEE----------------GVVKDEEEEGEAKDEEEE 336
+K QHK E+ EET V + + E G +++EEE + E EE
Sbjct: 433 MKVQHKFVEEIIEETKVEDDRSDMEAALAAMADEFASGLLDGGEEEEQEEETQEGGEAEE 492
Query: 337 EDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQ--M 394
E V+ V + + G EE + E E +E +++ E E E+ GEQ
Sbjct: 493 EIVAAVESSVQAAAPGEEGEEEEEEKGEDEAEAVEEGEKEEEEEEKGEEGEEEGGEQGEE 552
Query: 395 MDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEE 454
D + +KEE G++ GE + + + ++ E KE+ GEEEE E+ EE
Sbjct: 553 EDVKADEKEE------GEEEAEGEEAKTEEGEEEGETVEEEAEKEEGGEEEEKEEVAAEE 606
Query: 455 DDVEEDE 461
+ E +E
Sbjct: 607 EGGEGEE 613
Score = 52.4 bits (124), Expect = 5e-05
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 46/185 (24%)
Query: 305 EETLVVEVEGE------GEEGVVKDEE---------EEGEAKDEEEEEDGVVVKDEVDGS 349
EE +V VE GEEG ++EE EEGE K+EEEEE G ++E
Sbjct: 491 EEEIVAAVESSVQAAAPGEEGEEEEEEKGEDEAEAVEEGE-KEEEEEEKGEEGEEEGGEQ 549
Query: 350 G---DVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETE 406
G DVK EE + +E E + G+++ ET+ E E+ EG E+ +KEE
Sbjct: 550 GEEEDVKADEKEEGE-EEAEGEEAKTEEGEEEGETVEEEAEKEEGG-----EEEEKEEVA 603
Query: 407 MWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGF 466
+ +G + E+ + EGE EE + E E+E++ E +E + G
Sbjct: 604 A--------------------EEEGGEGEE-EGGEGETEEDKGEVEKEEEAETEEAEGGD 642
Query: 467 HFSTK 471
+T+
Sbjct: 643 EEATE 647
Score = 51.6 bits (122), Expect = 8e-05
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 297 KSQHKELFEETLV--------VEVEGEGEEGVVK-DEEEEGEAKDEEEEEDGVVVKDEVD 347
++Q +E+ EET+ EV+ + EG K D EE+ + ++EE +G +E +
Sbjct: 648 EAQDEEVVEETMTETKIVREKAEVQEKAAEGEEKQDSEEQKDEGEDEETGEGKEEAEEKE 707
Query: 348 GSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEM 407
G+ K E + QE E+ E ++ E++ GE EQ E+ EET
Sbjct: 708 EGGEEKEDASEGTEQQEEEKAEEEKGESEE-----GAEEDAGEDEQAKSPEEKSSEETIS 762
Query: 408 WFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKED---EGEEEEHEQEEEEED 455
+ + VG P + K + KED G+ EE E +EE ED
Sbjct: 763 --VSKAASVG-PEKEGAKQEEEKSTQRDNGKEDTAVNGDVEEEEVKEESED 810
Score = 38.5 bits (88), Expect = 0.69
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 298 SQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEE-----------------EEDGV 340
S+ E EE E +GE EEG +D E+ +AK EE E++G
Sbjct: 717 SEGTEQQEEEKAEEEKGESEEGAEEDAGEDEQAKSPEEKSSEETISVSKAASVGPEKEGA 776
Query: 341 VVKDEV-----DGSGDVKMGG-VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
++E +G D + G VEE +V+E E ++ G D ++ +KE +G+Q
Sbjct: 777 KQEEEKSTQRDNGKEDTAVNGDVEEEEVKEESEDKAVVTNGLD--DSPSEDKESSKGQQT 834
Query: 395 MDFEQSKKEET 405
+ +KK ET
Sbjct: 835 VVI--TKKIET 843
>gb|AAG00553.1| retinitis pigmentosa GTPase regulator [Bos taurus]
Length = 934
Score = 69.7 bits (169), Expect = 3e-10
Identities = 62/170 (36%), Positives = 87/170 (50%), Gaps = 14/170 (8%)
Query: 301 KELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDV--KMGGVE 358
+E EE E + E EEG K+EEEE E + EE EE +E +G GD + GG E
Sbjct: 414 EEADEEEGEEEKDKEKEEGKEKEEEEEQEGEGEELEEGRWQDGEEGEGKGDEEGQEGGRE 473
Query: 359 ENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGE 418
E +E +E E G++ E +E+GEGE+ E +EE E G+ GE
Sbjct: 474 EEGDREGQEGE-EEGEGEEAGE----GEEEGEGEE----EGEGEEEGEGEEAGEGEEAGE 524
Query: 419 PSLRPCHNRDRKGIDCEQV---KEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
R + +G E+V +E++GE +E E+EEEEE D EE+E G
Sbjct: 525 GKGREEEEKGEEGEGEEKVGGEEEEDGEGQEGEEEEEEEGDGEEEEEGDG 574
Score = 64.3 bits (155), Expect = 1e-08
Identities = 63/195 (32%), Positives = 90/195 (45%), Gaps = 35/195 (17%)
Query: 313 EGEGEEGVVKDEEEEGEAKD--EEEEEDGVVVKD-------------EVDGSGDVKMGGV 357
EGEGEE V +EEE+GE ++ EEEEE+G ++ EV+G G+V+ G
Sbjct: 536 EGEGEEKVGGEEEEDGEGQEGEEEEEEEGDGEEEEEGDGEEQEAEGGEVEGDGEVEEVGD 595
Query: 358 EENQVQELEEHNIELSLGQ---DKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKN 414
EE + EE + E G D+ E E+E+G+GE + + +EE + G++
Sbjct: 596 EEKEGDGEEEGDGEREGGTGEGDEEEQKGEEEEEGDGEGEEEGDGEGEEEGD--GEGEEE 653
Query: 415 YVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHL 474
GE K D E +E +GE EE + E EEE D E +E G
Sbjct: 654 GDGE------EQEGEKEEDGEGEEEGDGEGEEGDGEGEEEGDGEGEEEGDG--------- 698
Query: 475 EGMPSGTGSSIQAME 489
EG G G + E
Sbjct: 699 EGEEEGDGEEQEGEE 713
Score = 62.8 bits (151), Expect = 3e-08
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EGEGEE + EE GE K EEEE G +G G+ K+GG EE + E
Sbjct: 508 EEEGEGEE--AGEGEEAGEGKGREEEEKG------EEGEGEEKVGGEEEEDGEGQE---- 555
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
G+++ E E+ GE E+ D E+ + E E+ G+ VG+ + + +
Sbjct: 556 ----GEEEEE----EEGDGEEEEEGDGEEQEAEGGEVEGDGEVEEVGDEEKE--GDGEEE 605
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
G + EG+EEE + EEEEE D E +E G
Sbjct: 606 GDGEREGGTGEGDEEEQKGEEEEEGDGEGEEEGDG 640
Score = 57.4 bits (137), Expect = 1e-06
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 17/156 (10%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
EVEG+GE V DEE+EG+ EE+G ++ G GD EE + +E EE +
Sbjct: 583 EVEGDGEVEEVGDEEKEGD-----GEEEGDGEREGGTGEGD-----EEEQKGEEEEEGDG 632
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
E G+++ + E+ GEGE+ D E+ + E+ E G++ GE +
Sbjct: 633 E---GEEEGDGEGEEEGDGEGEEEGDGEEQEGEKEEDG-EGEEEGDGEGEEGDGEGEEEG 688
Query: 431 GIDCEQVKEDEGEEE---EHEQEEEEEDDVEEDEHD 463
+ E+ + EGEEE E ++ EEEED E+E D
Sbjct: 689 DGEGEEEGDGEGEEEGDGEEQEGEEEEDGEGEEEGD 724
Score = 55.5 bits (132), Expect = 5e-06
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 37/160 (23%)
Query: 311 EVEGEGEEGVVKDEE-----EEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQEL 365
E EG+GEE + EE EEG+ + EE + +G ++E DG G+ EE +
Sbjct: 651 EEEGDGEEQEGEKEEDGEGEEEGDGEGEEGDGEG---EEEGDGEGE------EEGDGEGE 701
Query: 366 EEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCH 425
EE + E G+ E+E GEGE+ D EQ +EE E G +
Sbjct: 702 EEGDGEEQEGE--------EEEDGEGEEEGDGEQEGEEEEEGG--GDEG----------- 740
Query: 426 NRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ +G E+++E EGEEE + EE E + EE E + G
Sbjct: 741 --EEEGEGEEELEEGEGEEEGEAEGEEGEGEEEEGEGEKG 778
Score = 54.7 bits (130), Expect = 9e-06
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 309 VVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEH 368
V+E G+GE+ + ++E+E+ E + +EE K+ + G E ++ + EE
Sbjct: 366 VIESLGKGEKDLEEEEQEQKEREQGHQEERSTGRKEAGEREQGGGEGEEEADEEEGEEEK 425
Query: 369 NIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRD 428
+ E G++K E E+++GEGE++ + EE E G+ + G+ R D
Sbjct: 426 DKEKEEGKEKEEE---EEQEGEGEELEEGRWQDGEEGE----GKGDEEGQEGGRE-EEGD 477
Query: 429 RKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
R+G Q E+EGE EE + EEE + EE E
Sbjct: 478 REG----QEGEEEGEGEEAGEGEEEGEGEEEGE 506
Score = 54.7 bits (130), Expect = 9e-06
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEE--EEEDGVVVKDEVDGSGDVK-----MGGVEENQVQ 363
E +GEGEE + EEEG+ +++E EEEDG + E +G G+ + GG +E + +
Sbjct: 687 EGDGEGEEEGDGEGEEEGDGEEQEGEEEEDG---EGEEEGDGEQEGEEEEEGGGDEGEEE 743
Query: 364 ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQ----KNYVGEP 419
E +E G+++ E E E+GEGE+ E+ + E+ G+ + GE
Sbjct: 744 GEGEEELEEGEGEEEGEA---EGEEGEGEE----EEGEGEKGGEGLGGEGEEGEEEGGER 796
Query: 420 SLRPCHNRDRKGIDCEQ---VKEDEGEEEEHEQEEEEEDDVEEDE 461
R+R+G++ E+ V E+E EE+EED+ E+E
Sbjct: 797 VEEGEGEREREGMEREEKEWVVRKRKEKENGRGEEKEEDENNEEE 841
Score = 53.9 bits (128), Expect = 2e-05
Identities = 56/181 (30%), Positives = 84/181 (45%), Gaps = 30/181 (16%)
Query: 305 EETLVVEVEGEGEE----------GVVKDEEEEGEAKDE-----EEEEDGVVVKDEVDGS 349
EE E EG+GEE G +EE++GE ++E EEE DG ++E DG
Sbjct: 591 EEVGDEEKEGDGEEEGDGEREGGTGEGDEEEQKGEEEEEGDGEGEEEGDG-EGEEEGDGE 649
Query: 350 GDVKMGGVEENQVQELEEHNIEL---------SLGQDKVETLPVEKEQGEGEQMMDFEQS 400
G+ + G E+ +E + E G+++ + E+ GEGE+ D E+
Sbjct: 650 GEEEGDGEEQEGEKEEDGEGEEEGDGEGEEGDGEGEEEGDGEGEEEGDGEGEEEGDGEEQ 709
Query: 401 KKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEED 460
+ EE E G++ GE + +G E +E EGEEE E E EEE + E +
Sbjct: 710 EGEEEEDG-EGEEEGDGEQE----GEEEEEGGGDEGEEEGEGEEELEEGEGEEEGEAEGE 764
Query: 461 E 461
E
Sbjct: 765 E 765
Score = 52.4 bits (124), Expect = 5e-05
Identities = 49/149 (32%), Positives = 75/149 (49%), Gaps = 16/149 (10%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEE----EEEDGVVVKDEVDGSGDVKMGGVEENQVQELE 366
E +GEGEE + EEEG+ + EE EE++G ++E DG G+ + G +E + E
Sbjct: 679 EGDGEGEEEGDGEGEEEGDGEGEEEGDGEEQEG---EEEEDGEGEEEGDGEQEGE----E 731
Query: 367 EHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHN 426
E G+++ E E E+GEGE+ + E + E E G+K GE
Sbjct: 732 EEEGGGDEGEEEGEG-EEELEEGEGEEEGEAEGEEGEGEEEEGEGEKG--GEGLGGEGEE 788
Query: 427 RDRKGIDCEQVKEDEGEEEEHEQEEEEED 455
+ +G E+V+E EGE E E EE++
Sbjct: 789 GEEEG--GERVEEGEGEREREGMEREEKE 815
Score = 47.0 bits (110), Expect = 0.002
Identities = 48/146 (32%), Positives = 71/146 (47%), Gaps = 15/146 (10%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVV-KDEVDGSGDVKMGGVEENQVQELEEHN 369
E EGE EE +EE +GE + EEEEE G ++E +G +++ G EE E EE
Sbjct: 708 EQEGEEEEDGEGEEEGDGEQEGEEEEEGGGDEGEEEGEGEEELEEGEGEEEGEAEGEEGE 767
Query: 370 IELSLGQDKV--ETLPVEKEQGEGEQMMDFEQSKKE-ETEMWFLGQKNYVGEPSLRPCHN 426
E G+ + E L E E+GE E E+ + E E E +K +V
Sbjct: 768 GEEEEGEGEKGGEGLGGEGEEGEEEGGERVEEGEGEREREGMEREEKEWVV--------- 818
Query: 427 RDRKGIDCEQVKEDEGEEEEHEQEEE 452
RK + E + +E EE+E+ +EE+
Sbjct: 819 --RKRKEKENGRGEEKEEDENNEEEK 842
Score = 45.4 bits (106), Expect = 0.006
Identities = 40/171 (23%), Positives = 77/171 (44%), Gaps = 39/171 (22%)
Query: 324 EEEEGEAKDEE----EEEDGVVVKDEVDGSGDVKMG------------------------ 355
EE+E EA +EE E+E+ ++ D++ +V G
Sbjct: 283 EEQEIEANEEECGEKEKEETALLSDDLTDRAEVSEGKGKLGGEAEHVPKGGGEGIRKEGN 342
Query: 356 -GVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKN 414
GVE+ EE +G+ +E+L G+GE+ ++ E+ +++E E +++
Sbjct: 343 SGVEQRSRTGSEEGEEGEDMGEGVIESL------GKGEKDLEEEEQEQKEREQGHQEERS 396
Query: 415 YVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ R++ G + E+ ++E EEE ++E+EE + EE+E G
Sbjct: 397 ----TGRKEAGEREQGGGEGEEEADEEEGEEEKDKEKEEGKEKEEEEEQEG 443
Score = 43.5 bits (101), Expect = 0.021
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 38/171 (22%)
Query: 312 VEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIE 371
+ EG GV + G + EE E+ G V + + G G+ + E+ Q + + H E
Sbjct: 337 IRKEGNSGV-EQRSRTGSEEGEEGEDMGEGVIESL-GKGEKDLEEEEQEQKEREQGHQEE 394
Query: 372 LSLGQDKVETLPVEKEQG--EGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDR 429
S G+ + E+EQG EGE+ D E+ ++E+
Sbjct: 395 RSTGRKEAG----EREQGGGEGEEEADEEEGEEEK------------------------- 425
Query: 430 KGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSG 480
++ KE+ E+EE E++E E +++EE G K EG G
Sbjct: 426 -----DKEKEEGKEKEEEEEQEGEGEELEEGRWQDGEEGEGKGDEEGQEGG 471
Score = 42.4 bits (98), Expect = 0.048
Identities = 42/136 (30%), Positives = 63/136 (45%), Gaps = 22/136 (16%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDG-SGDVKMGGVEENQVQELEEHN 369
E EGEGEE + EE EGE + E E E+G ++E +G G +GG E +E
Sbjct: 741 EEEGEGEEEL---EEGEGEEEGEAEGEEGEGEEEEGEGEKGGEGLGGEGEEGEEE----- 792
Query: 370 IELSLGQDKVETLPVEKEQGEGEQMMD-FEQSKKEETEMWFLGQKNYVGEPSLRPCHNRD 428
G ++V E+GEGE+ + E+ +KE ++N GE +N +
Sbjct: 793 -----GGERV-------EEGEGEREREGMEREEKEWVVRKRKEKENGRGEEKEEDENNEE 840
Query: 429 RKGIDCEQVKEDEGEE 444
KG E E+ G +
Sbjct: 841 EKGKCQETGNEESGRQ 856
Score = 38.9 bits (89), Expect = 0.53
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 301 KELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMG-GVEE 359
+EL E E E EGEEG EEEEGE + E G + E +G V+ G G E
Sbjct: 748 EELEEGEGEEEGEAEGEEGE--GEEEEGEGEKGGEGLGGEGEEGEEEGGERVEEGEGERE 805
Query: 360 NQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEE 404
+ E EE ++ V EKE G GE+ + E +++E+
Sbjct: 806 REGMEREE--------KEWVVRKRKEKENGRGEEKEEDENNEEEK 842
>gb|AAG00551.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 567
Score = 68.9 bits (167), Expect = 5e-10
Identities = 61/165 (36%), Positives = 83/165 (49%), Gaps = 11/165 (6%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
K + +E EE E EGEGEE + EEEEGE K EEE E+G ++ +G G+ G
Sbjct: 238 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGE---GE 294
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
EE + + EE E G+++ E +E+GEGE + + K EE G+
Sbjct: 295 EEEGEGEGEEEGEGE---GEEE-EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE---- 346
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
GE D +G E+ E EGEEEE E E EEE + E +E
Sbjct: 347 GEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEE 391
Score = 65.1 bits (157), Expect = 7e-09
Identities = 54/176 (30%), Positives = 83/176 (46%), Gaps = 16/176 (9%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEE-----EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
E EGEEG + EEEEGE + E+ EEE+G +E +G G+ + G E + E E
Sbjct: 337 EEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEG 396
Query: 368 HNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNR 427
E ++ E +E+GEGE+ + E ++EE E+ + GE
Sbjct: 397 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEV----EGEVEGEEGEGEGEEE 452
Query: 428 DRKGIDCEQVKEDEGEEEEHEQEEEEEDD-------VEEDEHDVGFHFSTKHHLEG 476
+ + E+ KE EGEE +EEEEE++ EE+E G + ++G
Sbjct: 453 EGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKG 508
Score = 62.8 bits (151), Expect = 3e-08
Identities = 59/177 (33%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 313 EGEGEEGVVKDEEEEGEAKDEEEE------EDGVVVKDEVDGSGDVKMGGVEENQVQELE 366
E EGEEG ++E EEGE + EEEE E+G +E +G G+ + G E + +E E
Sbjct: 274 EEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGE 333
Query: 367 ---EHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
E E G+ + E E E GEGE + + + EE E G++ GE
Sbjct: 334 GKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGE----- 388
Query: 424 CHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKHHLEGMPSG 480
+ +G E+ E EGEEEE E EE EE+ E+E + + +EG G
Sbjct: 389 --GEEGEGEGEEEEGEGEGEEEEGE-EEGEEEGEGEEEGEGEGEEEEEGEVEGEVEG 442
Score = 62.8 bits (151), Expect = 3e-08
Identities = 67/199 (33%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEE-EGEAKDEEEEED--GVVVKDEVDGSGDVK 353
K +++E+ E EGE EEG ++EEE EGE K+E E E+ G K+E + + +
Sbjct: 136 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER 195
Query: 354 MG----GVEENQVQELEEHNIELSLGQDKVETLPVEK---EQGEGEQMMDFEQSKKEETE 406
G G EE E EE E G++K E VE E+G+GE+ + E+ + EE E
Sbjct: 196 AGKEEKGEEEGDQGEGEEEETE-GRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEE 254
Query: 407 MWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQE---EEEEDDVEEDEHD 463
G+ GE + +G E+ +E EGEEE E E EEEE + E +E
Sbjct: 255 ----GE----GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEG 306
Query: 464 VGFHFSTKHHLEGMPSGTG 482
G + EG G G
Sbjct: 307 EGEGEEEEGEGEGEEEGEG 325
Score = 60.5 bits (145), Expect = 2e-07
Identities = 56/167 (33%), Positives = 81/167 (47%), Gaps = 20/167 (11%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
K + + EE E +GE E + EEEE E + EE+EE G EV+G G+V+ G
Sbjct: 185 KEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGG-----EVEG-GEVEEGK 238
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
E +E EE E G+ + E E+E+GEG+ + E+ + EE
Sbjct: 239 GERE--EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEE----------- 285
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
GE + +G + E+ E EGEEEE E E EEE + E +E +
Sbjct: 286 GEEGEGEGEEEEGEG-EGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 331
Score = 58.5 bits (140), Expect = 6e-07
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 311 EVEGEGEEGVVKDEEEEGEA---KDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
E EG GEE E E GE K E EEE+ +E +G G+ + G EE + + E
Sbjct: 215 ETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGE 274
Query: 368 HNIELSLGQDKVETLPVEKEQGEGEQMMDFE-QSKKEETEMWFLGQKNYVGEPSLRPCHN 426
E G+++ E E E+ EGE + E + + EE E G++ GE
Sbjct: 275 EEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEG-----EE 329
Query: 427 RDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
+ +G E+ +E EGE EE E E E ED E E + G
Sbjct: 330 EEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEG 368
Score = 54.3 bits (129), Expect = 1e-05
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 310 VEVEGEGEEGVVKDEE---EEGEAKDEEEEEDGVVVK--DEVDGSGDVKMG-GVEENQVQ 363
+E GEGE+ + + EE +GE ++++E E G + E++ G+ + G G EE +
Sbjct: 101 MERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDR 160
Query: 364 ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
E EE + + E + E+E+ EGE+ + K+E+ E + E R
Sbjct: 161 EEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRG 220
Query: 424 CHNRDRKGIDCEQVKEDEGEEEEHEQE---EEEEDDVEEDE 461
+ ++ +V+E +GE EE E+E EEEE + EE+E
Sbjct: 221 EEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEE 261
Score = 50.4 bits (119), Expect = 2e-04
Identities = 54/198 (27%), Positives = 78/198 (39%), Gaps = 40/198 (20%)
Query: 296 IKSQHKELFEETLVVEVEGEGEEGVVKD------EEEEGEAKDEEEEEDGVVVKDEVDGS 349
I+ Q E EE + V + + ++ D E EG+AK E EDG + DG+
Sbjct: 16 IEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGP--EGRGDGT 73
Query: 350 GDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKK-EETEMW 408
+ G E Q +E E+ EK++G GE E K+ E E W
Sbjct: 74 CEEGSSGAEHWQDEEREKG----------------EKDKGRGEMERPGEGEKELAEKEEW 117
Query: 409 FLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHF 468
+ H ++R + +EG EEEH + EEEE D EE+E G
Sbjct: 118 KKRDGEEQEQKEREQGHQKERNQ------EMEEGGEEEHGEGEEEEGDREEEEEKEG--- 168
Query: 469 STKHHLEGMPSGTGSSIQ 486
EG G G ++
Sbjct: 169 ------EGKEEGEGEEVE 180
Score = 40.8 bits (94), Expect = 0.14
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E EGEGE ++ E EGE + EE E +G + E +G K G
Sbjct: 407 EEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGE 466
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQ 393
EEN+ EE E G+ + ET E E+ +GE+
Sbjct: 467 GEENRRNREEEEEEE---GKYQ-ETGEEENERQDGEE 499
>gb|AAD25853.1| hypothetical protein [Arabidopsis thaliana] gi|25411550|pir||F84514
hypothetical protein At2g14140 [imported] - Arabidopsis
thaliana
Length = 783
Score = 68.2 bits (165), Expect = 8e-10
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEE------DGVVVKDEVDGSGDVKMGGVE 358
E T E+ +G+E + +EE++ E EEEEE D K E+ GD +M G E
Sbjct: 399 EGTEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGDEEMEGEE 458
Query: 359 ENQVQ---ELEEHNIELSLGQDKVETLPVEK---EQGEGEQMMDFEQSKKEETEMWFLGQ 412
E Q + E EE +E G ++ E + K E+ EGE+ E+ K+EE E +
Sbjct: 459 EKQEEEGKEKEEEKVEYR-GDEETEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEK--VEY 515
Query: 413 KNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTKH 472
K++ ++ ++ E+++ +EG+EE+ E+ +E D +++ + + S
Sbjct: 516 KDHHSTCNVEETEKQENPKQGDEEMEREEGKEEKVEEHDEYNDAADQEAY---INLSDDE 572
Query: 473 HLEGMPSGTGSSIQAMEAVQMPFGSGIHLHD 503
+ P+ S Q E ++P + HD
Sbjct: 573 DNDTAPTEKESQPQKEETTEVPKEENVEEHD 603
Score = 60.1 bits (144), Expect = 2e-07
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEE---DGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
E+EGE E+ +EEEG+ K+EE+ E D K E+ GD +M G EE Q +E +E
Sbjct: 453 EMEGEEEK-----QEEEGKEKEEEKVEYRGDEETEKQEIPKQGDEEMEGEEEKQEEEGKE 507
Query: 368 HNIELSLGQDKVETLPVEKEQ-----GEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLR 422
E +D T VE+ + +G++ M+ E+ K+E+ E + N +
Sbjct: 508 EEEEKVEYKDHHSTCNVEETEKQENPKQGDEEMEREEGKEEKVEEH--DEYNDAADQEAY 565
Query: 423 PCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ D KE + ++EE + +EE+ E DEHD
Sbjct: 566 INLSDDEDNDTAPTEKESQPQKEETTEVPKEENVEEHDEHD 606
>pir||E86336 hypothetical protein F14O10.11 - Arabidopsis thaliana
gi|9558597|gb|AAF88160.1| Contains weak similarity to an
unknown protein T23E18.5 gi|6573728 from Arabidopsis
thaliana BAC T23E18 gb|AC009978. EST gb|W43440 comes
from this gene
Length = 409
Score = 68.2 bits (165), Expect = 8e-10
Identities = 48/158 (30%), Positives = 79/158 (49%), Gaps = 34/158 (21%)
Query: 306 ETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQEL 365
E +V+ E E EE ++EEEE E ++EEEEE+ ++E + + EE + +E
Sbjct: 269 EGTIVQAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE------EEEEEEEE 322
Query: 366 EEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCH 425
EE E +++ E E+E+ E E+ + E+ ++EE E
Sbjct: 323 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE------------------- 363
Query: 426 NRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E+ +E+E EEEE E+EEEEE++ EE+E +
Sbjct: 364 ---------EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 392
Score = 67.8 bits (164), Expect = 1e-09
Identities = 45/146 (30%), Positives = 77/146 (51%), Gaps = 20/146 (13%)
Query: 316 GEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLG 375
GE +V+ EEEE E ++EEEEE+ ++E + + + EE + +E EE E
Sbjct: 268 GEGTIVQAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 327
Query: 376 QDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCE 435
+++ E E+E+ E E+ + E+ ++EE E + + + E
Sbjct: 328 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE--------------------EEEEEEEEE 367
Query: 436 QVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ +E+E EEEE E+EEEEE++ EE+E
Sbjct: 368 EEEEEEEEEEEEEEEEEEEEEEEEEE 393
Score = 67.4 bits (163), Expect = 1e-09
Identities = 49/159 (30%), Positives = 79/159 (48%), Gaps = 34/159 (21%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
E T+V E E EE ++EEEE E ++EEEEE+ ++E + + EE + +E
Sbjct: 269 EGTIVQAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE------EEEEEEE 322
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
EE E +++ E E+E+ E E+ + E+ ++EE E
Sbjct: 323 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE------------------ 364
Query: 425 HNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E+ +E+E EEEE E+EEEEE++ EE+E +
Sbjct: 365 ----------EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 393
Score = 66.2 bits (160), Expect = 3e-09
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 28/150 (18%)
Query: 314 GEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELS 373
GEG ++EEEE E ++EEEEE+ ++E + + + EE + +E EE E
Sbjct: 268 GEGTIVQAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 327
Query: 374 LGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGID 433
+++ E E+E+ E E+ + E+ ++EE E
Sbjct: 328 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE--------------------------- 360
Query: 434 CEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E+ +E+E EEEE E+EEEEE++ EE+E +
Sbjct: 361 -EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 389
Score = 65.1 bits (157), Expect = 7e-09
Identities = 46/160 (28%), Positives = 79/160 (48%), Gaps = 28/160 (17%)
Query: 304 FEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQ 363
F ++V EG + ++EEEE E ++EEEEE+ ++E + + + EE + +
Sbjct: 260 FTPSMVHVGEGTIVQAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 319
Query: 364 ELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP 423
E EE E +++ E E+E+ E E+ + E+ ++EE E
Sbjct: 320 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE----------------- 362
Query: 424 CHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E+ +E+E EEEE E+EEEEE++ EE+E +
Sbjct: 363 -----------EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 391
Score = 60.1 bits (144), Expect = 2e-07
Identities = 48/166 (28%), Positives = 76/166 (44%), Gaps = 47/166 (28%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E E E EE ++EEEE E ++EEEEE+
Sbjct: 278 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE------------------ 319
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYV 416
EE + +E EE E +++ E E+E+ E E+ + E+ ++EE E
Sbjct: 320 -EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE---------- 368
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEH 462
E+ +E+E EEEE E+EEEEE++ EE ++
Sbjct: 369 ------------------EEEEEEEEEEEEEEEEEEEEEEEEEKKY 396
Score = 47.0 bits (110), Expect = 0.002
Identities = 32/107 (29%), Positives = 57/107 (52%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E E E EE ++EEEE E ++EEEEE+ ++E + + +
Sbjct: 299 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 358
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKE 403
EE + +E EE E +++ E E+E+ E ++ M ++ KK+
Sbjct: 359 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKYMIVKKKKKK 405
Score = 46.2 bits (108), Expect = 0.003
Identities = 32/109 (29%), Positives = 57/109 (51%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E E E EE ++EEEE E ++EEEEE+ ++E + + +
Sbjct: 300 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 359
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEET 405
EE + +E EE E +++ E E+E+ E + M+ ++ KK +
Sbjct: 360 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKYMIVKKKKKKRRS 408
Score = 45.8 bits (107), Expect = 0.004
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E E E EE ++EEEE E ++EEEEE+ ++E + + +
Sbjct: 298 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 357
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEE 404
EE + +E EE E +++ E E+E+ E E+ + KK++
Sbjct: 358 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKYMIVKKKKKK 405
Score = 44.3 bits (103), Expect = 0.013
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGG 356
+ + +E EE E E E EE ++EEEE E ++EEEEE+ ++E
Sbjct: 301 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE----EEE----------- 345
Query: 357 VEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQK 413
EE + +E EE E +++ E E+E+ E E+ + E+ ++EE + + + +K
Sbjct: 346 -EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKYMIVKK 401
>pir||I51116 NF-180 - sea lamprey gi|632549|gb|AAA80106.1| NF-180
Length = 1110
Score = 68.2 bits (165), Expect = 8e-10
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 17/153 (11%)
Query: 309 VVEVEGEGEEGVVKDEEEEGEAK-DEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
VV E + EE ++E+EE EA+ +EEEEED + +G + + EE + +E EE
Sbjct: 480 VVSAEKDEEEEEEEEEKEEEEAEAEEEEEED----RGRKEGEAEAEEEAEEEVEKEEAEE 535
Query: 368 HNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNR 427
+E + ++ E+E+ EGE+ + E + EE E V E ++
Sbjct: 536 AEVEEAEAEETEAEAAEEEEEAEGEEEAEAEGEEAEEAE--------EVEEEAIEKAEAA 587
Query: 428 DRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEED 460
+ K +V+E+E E EE E+EE EE++VE +
Sbjct: 588 EAKA----EVEEEEAEAEEEEEEEAEEEEVEAE 616
Score = 61.6 bits (148), Expect = 8e-08
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 257 KEGNLEKMDWAGLMWSMLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEG 316
KEG E + A E+E++ EE + +++ +E E E E EG
Sbjct: 514 KEGEAEAEEEA-------EEEVEKEEAEEA-------EVEEAEAEETEAEAAEEEEEAEG 559
Query: 317 EEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQ 376
EE + EE EA++ EEE E + + EE + +E EE +E +
Sbjct: 560 EEEAEAEGEEAEEAEEVEEEAIEKAEAAEAKAEVEEEEAEAEEEEEEEAEEEEVEAETKE 619
Query: 377 DKVETLPVEKEQGEGEQMMDFEQSKKEE-TEMWFLGQKNYVGEPSLRPCHNRDRKGIDCE 435
+ VE+E E+ + E++++EE T Q+ V E + + E
Sbjct: 620 EVEAEAEVEEEGEAAEEEAEEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEAEEE 679
Query: 436 QVKED-EGEEEEHEQEEEEEDDVEEDE 461
+ED E E +E E+E+ +E D EEDE
Sbjct: 680 AGEEDVEAESKEEEEEDSKEADAEEDE 706
Score = 60.5 bits (145), Expect = 2e-07
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVV---VKDEVDGSGDVKMGGVEENQVQELEE 367
E + E EE + EEEE EA++EEEE+ G + E + +V+ EE +V+E E
Sbjct: 484 EKDEEEEEEEEEKEEEEAEAEEEEEEDRGRKEGEAEAEEEAEEEVEKEEAEEAEVEEAEA 543
Query: 368 HNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNR 427
E +++ E E+ + EGE+ + E+ ++E E + E
Sbjct: 544 EETEAEAAEEEEEAEGEEEAEAEGEEAEEAEEVEEEAIEKAEAAEAKAEVEEEEAEAEEE 603
Query: 428 DRKGIDCEQVKEDEGEE--------EEHEQEEEEEDDVEEDEHDV 464
+ + + E+V+ + EE EE E EEE ++ E +E +V
Sbjct: 604 EEEEAEEEEVEAETKEEVEAEAEVEEEGEAAEEEAEEEEAEEEEV 648
Score = 57.8 bits (138), Expect = 1e-06
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEE---DGVVVKDEVDGSGDVKMGGVEENQVQELEE 367
E E E EE V K+E EE E ++ E EE + ++E +G + + G E + +E+EE
Sbjct: 519 EAEEEAEEEVEKEEAEEAEVEEAEAEETEAEAAEEEEEAEGEEEAEAEGEEAEEAEEVEE 578
Query: 368 HNIELSLGQD---KVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPC 424
IE + + +VE E E+ E E+ + E + + E+ + GE +
Sbjct: 579 EAIEKAEAAEAKAEVEEEEAEAEEEEEEEAEEEEVEAETKEEVEAEAEVEEEGEAAEEEA 638
Query: 425 HNRD--RKGIDCEQVKEDEGEEEEHEQEEEE---EDDVEED--EHDV 464
+ + + ++ K E E EE E E E E++ EE+ E DV
Sbjct: 639 EEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEAEEEAGEEDV 685
Score = 55.5 bits (132), Expect = 5e-06
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 256 IKEGNLEKMDWAGLMWSMLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGE 315
++E +EK + A + E+E +A EE EE EVE E
Sbjct: 576 VEEEAIEKAEAAEAKAEVEEEEAEAEEEEE-------------------EEAEEEEVEAE 616
Query: 316 GEEGVVKDEE--EEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELE---EHNI 370
+E V + E EEGEA +EE EE+ ++ + VEE + + E E
Sbjct: 617 TKEEVEAEAEVEEEGEAAEEEAEEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEA 676
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
E G++ VE E+E+ E + D E+ + EE E+ ++ V + +
Sbjct: 677 EEEAGEEDVEAESKEEEE-EDSKEADAEEDEAEEEEV----KEEEVTKSDAEEAEAEAEE 731
Query: 431 GIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ + E ++E E+EE EE+ VEE E
Sbjct: 732 EAAKSEEEAAEEAKDEAEEEEAEEEAVEETE 762
Score = 42.7 bits (99), Expect = 0.037
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 301 KELFEETLVVEVEGEGEEGVVKD------EEEEGEAKDEEEEEDGVVVKDEVDGSGDVKM 354
+E EE +VE E +E +D EE+E E ++ +EEE +E + + +
Sbjct: 674 EEAEEEAGEEDVEAESKEEEEEDSKEADAEEDEAEEEEVKEEEVTKSDAEEAEAEAEEEA 733
Query: 355 GGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKE--ETEMWFLGQ 412
EE +E ++ E ++ VE E+ E ++ D E+ ++E E+E +
Sbjct: 734 AKSEEEAAEEAKDEAEEEEAEEEAVEETEAATEEAEAKEASDDEKPEEEVKESEAPVAPE 793
Query: 413 KNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEE 454
EP P K EDE + E E++ + E
Sbjct: 794 AKKAPEPKAAPKKKAPAKVESPTSEPEDEPKAEVVEKKGKAE 835
Score = 42.4 bits (98), Expect = 0.048
Identities = 44/190 (23%), Positives = 78/190 (40%), Gaps = 34/190 (17%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEE 334
E+E + EE S +++ +E E E E E EE +E+ E E+K+EE
Sbjct: 635 EEEAEEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEAEE-EAGEEDVEAESKEEE 693
Query: 335 EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
EE+ E D D EE +V+E E + + + E + E+ E+
Sbjct: 694 EED-----SKEADAEED----EAEEEEVKEEEVTKSDAEEAEAEAEEEAAKSEEEAAEEA 744
Query: 395 MDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEE 454
D ++++EE E + ++ + +E E +E +E+ E
Sbjct: 745 KD--EAEEEEAE----------------------EEAVEETEAATEEAEAKEASDDEKPE 780
Query: 455 DDVEEDEHDV 464
++V+E E V
Sbjct: 781 EEVKESEAPV 790
Score = 40.0 bits (92), Expect = 0.24
Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 30/184 (16%)
Query: 301 KELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVV-------------KDEVD 347
+E EE V E E EE K+ ++ + ++E +E + V K +
Sbjct: 750 EEEAEEEAVEETEAATEEAEAKEASDDEKPEEEVKESEAPVAPEAKKAPEPKAAPKKKAP 809
Query: 348 GSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEM 407
+ E+ E+ E + + K + +KE E+ + E+S EE
Sbjct: 810 AKVESPTSEPEDEPKAEVVEKKGKAEAPKPKAKPAAAKKEAKPVEKEEEPEESPTEEEP- 868
Query: 408 WFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKED------------EGEEEEHEQEEEEED 455
+K +P+ P + + E+ E E EE+E E +EEEE+
Sbjct: 869 ----KKPAAAKPAKAPAKPKPAPKAEAEEKPEPAKPAQAKPAPAAEEEEDEKEDDEEEEE 924
Query: 456 DVEE 459
+VEE
Sbjct: 925 EVEE 928
Score = 38.1 bits (87), Expect = 0.90
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 55/222 (24%)
Query: 297 KSQHKELFEETLVV----EVEGEGEEGVVKDEEE-----EGEAKDEEEEEDGVVVKDEVD 347
+++ +E+ EE + E E E EE K EEE + EA++EE EE+ V +
Sbjct: 706 EAEEEEVKEEEVTKSDAEEAEAEAEEEAAKSEEEAAEEAKDEAEEEEAEEEAVEETEAAT 765
Query: 348 GSGDVKMGGVEENQVQELEEHNIELSLGQDKV---ETLPVEKEQGEGEQMMDFEQSKKEE 404
+ K +E +E++E ++ K + P +K + E E + +
Sbjct: 766 EEAEAKEASDDEKPEEEVKESEAPVAPEAKKAPEPKAAPKKKAPAKVESPTS-EPEDEPK 824
Query: 405 TEMWFLGQKNYVGEPSLRPCH-NRDRKGIDCEQVKEDEGEEEEH---------------- 447
E+ K +P +P ++ K ++ E+ E+ EEE
Sbjct: 825 AEVVEKKGKAEAPKPKAKPAAAKKEAKPVEKEEEPEESPTEEEPKKPAAAKPAKAPAKPK 884
Query: 448 -------------------------EQEEEEEDDVEEDEHDV 464
E+EE+E++D EE+E +V
Sbjct: 885 PAPKAEAEEKPEPAKPAQAKPAPAAEEEEDEKEDDEEEEEEV 926
Score = 35.8 bits (81), Expect = 4.5
Identities = 16/28 (57%), Positives = 21/28 (74%)
Query: 438 KEDEGEEEEHEQEEEEEDDVEEDEHDVG 465
K++E EEEE E+EEEE + EE+E D G
Sbjct: 485 KDEEEEEEEEEKEEEEAEAEEEEEEDRG 512
Score = 35.0 bits (79), Expect = 7.6
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 428 DRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
+ K ++DE EEEE E++EEEE + EE+E +
Sbjct: 474 EAKAAPVVSAEKDEEEEEEEEEKEEEEAEAEEEEEE 509
>gb|AAG00554.1| retinitis pigmentosa GTPase regulator-like protein [Takifugu
rubripes]
Length = 791
Score = 68.2 bits (165), Expect = 8e-10
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 33/155 (21%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDV----KMGGVEENQVQELE 366
E E +GE V ++EEEE E + EEE+E+ K+E D + + EEN+ +E E
Sbjct: 625 EEEEDGETDVQEEEEEEEETEKEEEDEEEETEKEEEDEEEETDRVEEEEDAEENEEEEEE 684
Query: 367 EHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHN 426
E N E E E+ +GE+ D E +E+ E +
Sbjct: 685 ESNSE-------------EDEESDGEEEEDEESDSEEDEE---------------EESES 716
Query: 427 RDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDE 461
+ +G + E +E+EGEE E E+EE EE D EE+E
Sbjct: 717 EEEEGEESES-EEEEGEESESEEEEGEESDREEEE 750
Score = 65.9 bits (159), Expect = 4e-09
Identities = 52/196 (26%), Positives = 91/196 (45%), Gaps = 8/196 (4%)
Query: 272 SMLEKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAK 331
S EKE ++ E+ + + E EE+ E +E ++EEEE E++
Sbjct: 526 SSTEKEGESNEEEQSSTEKEESNEEEQSSTEKEEESNEEEQSSTEKEESNEEEEEEEESE 585
Query: 332 DEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEG 391
EEE + KDE + + G +E + +E EE N E +++ V++E+ E
Sbjct: 586 SNEEESEEEDQKDE----EEEETGEEDEEEEEESEEQNQEEEAEEEEDGETDVQEEEEEE 641
Query: 392 EQMMDFEQSKKEETEMWFLGQKNYVG----EPSLRPCHNRDRKGIDCEQVKEDEGEEEEH 447
E+ E+ ++EETE ++ E + + + E+ +E +GEEEE
Sbjct: 642 EETEKEEEDEEEETEKEEEDEEEETDRVEEEEDAEENEEEEEEESNSEEDEESDGEEEED 701
Query: 448 EQEEEEEDDVEEDEHD 463
E+ + EED+ EE E +
Sbjct: 702 EESDSEEDEEEESESE 717
Score = 64.3 bits (155), Expect = 1e-08
Identities = 56/191 (29%), Positives = 92/191 (47%), Gaps = 30/191 (15%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEE 334
E+E +T EE Q + + + EE E E EE ++EEEE E+ +EE
Sbjct: 536 EEEQSSTEKEESNEEE--QSSTEKEEESNEEEQSSTEKEESNEE---EEEEEESESNEEE 590
Query: 335 EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
EE+ KDE + + G +E + +E EE N E +++ V++E+ E E+
Sbjct: 591 SEEEDQ--KDEEEE----ETGEEDEEEEEESEEQNQEEEAEEEEDGETDVQEEEEEEEET 644
Query: 395 MDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEE 454
E+ ++EETE + + + ++V+E+E + EE+E+EEEEE
Sbjct: 645 EKEEEDEEEETEK------------------EEEDEEEETDRVEEEE-DAEENEEEEEEE 685
Query: 455 DDVEEDEHDVG 465
+ EEDE G
Sbjct: 686 SNSEEDEESDG 696
Score = 62.8 bits (151), Expect = 3e-08
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 16/196 (8%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGE-GEEGVVKDEEEEGEAKDE 333
E+E +T EE + +S +E EE E E E GEE DEEEE E++++
Sbjct: 563 EEEQSSTEKEESNEEEEEEEESESNEEESEEEDQKDEEEEETGEE----DEEEEEESEEQ 618
Query: 334 EEEEDGVVVKDEVDGSGDVKMGGVEENQVQ---ELEEHNIELSLGQDKVETLPVEKEQGE 390
+EE+ ++E DG DV+ EE + + E EE E ++ ET VE+E+
Sbjct: 619 NQEEEA---EEEEDGETDVQEEEEEEEETEKEEEDEEEETEKEEEDEEEETDRVEEEEDA 675
Query: 391 GEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRP-----CHNRDRKGIDCEQVKEDEGEEE 445
E + E+ E + G++ E + + +G + E +E+ E E
Sbjct: 676 EENEEEEEEESNSEEDEESDGEEEEDEESDSEEDEEEESESEEEEGEESESEEEEGEESE 735
Query: 446 EHEQEEEEEDDVEEDE 461
E+E EE D EE+E
Sbjct: 736 SEEEEGEESDREEEEE 751
Score = 60.8 bits (146), Expect = 1e-07
Identities = 50/183 (27%), Positives = 79/183 (42%), Gaps = 19/183 (10%)
Query: 298 SQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEED------GVVVKDEVDGSGD 351
S H+ ++ E EGE EE EEEEG++K + EE D G ++E +
Sbjct: 431 SDHESERKKASESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETEGEGAEEEQSSTEK 490
Query: 352 VKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLG 411
EE E EE N E +K E+ E+EQ E+ + + ++ TE
Sbjct: 491 EGESNEEEQSSTEKEESNEEEQSSTEKEESN--EEEQSSTEKEGESNEEEQSSTEKEESN 548
Query: 412 QKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHE-----------QEEEEEDDVEED 460
++ + ++ + E+ E+E EEEE E ++EEEE+ EED
Sbjct: 549 EEEQSSTEKEEESNEEEQSSTEKEESNEEEEEEEESESNEEESEEEDQKDEEEEETGEED 608
Query: 461 EHD 463
E +
Sbjct: 609 EEE 611
Score = 60.1 bits (144), Expect = 2e-07
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 275 EKELKATHLEECYYASHLQHLIKSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEE 334
E+E +T EE ++ + + + EE E EGE E +E+ E ++
Sbjct: 496 EEEQSSTEKEE---SNEEEQSSTEKEESNEEEQSSTEKEGESNE----EEQSSTEKEESN 548
Query: 335 EEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQM 394
EEE K+E + EE+ +E EE E + + + E E+E+ GE+
Sbjct: 549 EEEQSSTEKEEESNEEEQSSTEKEESNEEEEEEEESESNEEESEEEDQKDEEEEETGEED 608
Query: 395 MDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEE--- 451
+ E+ + EE ++ GE ++ + + E+ +E+E E+EE ++EE
Sbjct: 609 EE-EEEESEEQNQEEEAEEEEDGETDVQEEEEEEEETEKEEEDEEEETEKEEEDEEEETD 667
Query: 452 --EEEDDVEEDEHD 463
EEE+D EE+E +
Sbjct: 668 RVEEEEDAEENEEE 681
Score = 57.0 bits (136), Expect = 2e-06
Identities = 40/155 (25%), Positives = 69/155 (43%), Gaps = 8/155 (5%)
Query: 311 EVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQELEEHNI 370
E EGEG E E+EGE+ +EE+ E + S + + E+ + E E+ +
Sbjct: 475 ETEGEGAEEEQSSTEKEGESNEEEQSST------EKEESNEEEQSSTEKEESNEEEQSST 528
Query: 371 ELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGEPSLRPCHNRDRK 430
E ++ E EKE+ E+ E+ ++ E +K E + +
Sbjct: 529 EKEGESNEEEQSSTEKEESNEEEQSSTEKEEESNEEEQSSTEKEESNEEEEEEEESESNE 588
Query: 431 GIDCEQVKEDEGEEE--EHEQEEEEEDDVEEDEHD 463
E+ ++DE EEE E ++EEEEE + + E +
Sbjct: 589 EESEEEDQKDEEEEETGEEDEEEEEESEEQNQEEE 623
Score = 53.9 bits (128), Expect = 2e-05
Identities = 52/175 (29%), Positives = 79/175 (44%), Gaps = 26/175 (14%)
Query: 310 VEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVE----ENQVQEL 365
VE E EGE EEEE E ++EEE + E + G+ K VE E++V+E
Sbjct: 368 VEDEEEGESRSEGQEEEEEEEEEEEERSSTAESESEDEKKGERKERDVEEEEGESEVEES 427
Query: 366 EE---HNIELSLGQDKVETLPVEK-----EQGEGEQMMDFEQSKKE-ETEMWFLGQKNYV 416
EE H E + E E+ E+ EG+ D E+S E ETE
Sbjct: 428 EEGSDHESERKKASESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETE---------- 477
Query: 417 GEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHDVGFHFSTK 471
GE + + +++G E +E++ E+ E EEE+ E++E + ST+
Sbjct: 478 GEGAEEEQSSTEKEG---ESNEEEQSSTEKEESNEEEQSSTEKEESNEEEQSSTE 529
Score = 50.4 bits (119), Expect = 2e-04
Identities = 48/172 (27%), Positives = 71/172 (40%), Gaps = 11/172 (6%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKD-----EVDGSGD 351
+ KE + T E E E EE K+E++ EEEEE+ D E +G D
Sbjct: 297 EEDEKESIQGTEEEEEEEEEEEEDQKEEQKTSADVSEEEEENVTQSSDKASDEEKEGDSD 356
Query: 352 VKMGGVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLG 411
E E EE S GQ++ E E+E+ + E KK E + +
Sbjct: 357 TLHPEDESQSDVEDEEEGESRSEGQEEEEEEEEEEEERSSTAESESEDEKKGERKERDVE 416
Query: 412 QKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
++ GE + +G D E ++ E EE +EEE + EE+E D
Sbjct: 417 EEE--GESEV----EESEEGSDHESERKKASESEEEGEEEEADSLSEEEEGD 462
Score = 49.7 bits (117), Expect = 3e-04
Identities = 78/348 (22%), Positives = 135/348 (38%), Gaps = 43/348 (12%)
Query: 306 ETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQEL 365
E++ E E E +EEEE E EEEEED K+E S DV EEN Q
Sbjct: 291 ESVTANEEDEKESIQGTEEEEEEE---EEEEED---QKEEQKTSADVS-EEEEENVTQSS 343
Query: 366 EEHNIELSLG-------QDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNYVGE 418
++ + E G +D+ ++ ++E+GE E+ ++EE E +++ E
Sbjct: 344 DKASDEEKEGDSDTLHPEDESQSDVEDEEEGESRSEGQEEEEEEEEEE----EERSSTAE 399
Query: 419 PSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEE------------EEEDDVEEDEHDVGF 466
+RK D V+E+EGE E E EE E E++ EE+E D
Sbjct: 400 SESEDEKKGERKERD---VEEEEGESEVEESEEGSDHESERKKASESEEEGEEEEAD--- 453
Query: 467 HFSTKHHLEGMPSGTGSSIQAMEAVQMPFGSGIHLHDSSVGDFLSARDDPQMIHGSSLFG 526
S EG + S + +A G G SS + ++ Q +
Sbjct: 454 --SLSEEEEG---DSKSDAEESDAESETEGEGAEEEQSSTEKEGESNEEEQ--SSTEKEE 506
Query: 527 NGHKRDIGLDNHNSHHTLNGSNKRLRSDSPWSSQPIDFEGCMEQMQHFMEKARMMYASKD 586
+ + + S+ S ++ + + E E+ Q EK +
Sbjct: 507 SNEEEQSSTEKEESNEEEQSSTEKEGESNEEEQSSTEKEESNEEEQSSTEKEEESNEEEQ 566
Query: 587 QAAEESAANQQVLLNELQRRDEMVAHLQKARIDQTQKTQIEVYRLEKE 634
+ E+ +N++ E +E + + + ++ ++T E E+E
Sbjct: 567 SSTEKEESNEEEEEEEESESNEEESEEEDQKDEEEEETGEEDEEEEEE 614
Score = 47.0 bits (110), Expect = 0.002
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEGEAKDEE-EEEDGVVVKDEVDGSGDVKMG 355
+S+ +E EE E E ++E++GE K+ + EEE+G +E + D +
Sbjct: 377 RSEGQEEEEEEEEEEEERSSTAESESEDEKKGERKERDVEEEEGESEVEESEEGSDHESE 436
Query: 356 GVEENQVQELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEMWFLGQKNY 415
+ ++ +E E SL +++ + E+ + E + E +++E++ G+ N
Sbjct: 437 RKKASESEEEGEEEEADSLSEEEEGDSKSDAEESDAESETEGEGAEEEQSSTEKEGESNE 496
Query: 416 VGEPSLRPCHNRDRKGIDCEQVKEDEGE----EEEHEQEEEEEDDVEEDEHDVGFHFSTK 471
+ S + + + E+ + +E E E+E E EEE+ E++E + ST+
Sbjct: 497 EEQSSTEKEESNEEEQSSTEKEESNEEEQSSTEKEGESNEEEQSSTEKEESNEEEQSSTE 556
Query: 472 HHLE 475
E
Sbjct: 557 KEEE 560
Score = 45.8 bits (107), Expect = 0.004
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEENQVQE 364
EE E E E EE +EEE+ E +EEEEE+ +DE + G+ + +++ E
Sbjct: 652 EEETEKEEEDEEEETDRVEEEEDAEENEEEEEEESNSEEDE-ESDGEEEEDEESDSEEDE 710
Query: 365 LEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEETEM 407
EE E G++ E+ E E+ E E+ E ++EE E+
Sbjct: 711 EEESESEEEEGEES-ESEEEEGEESESEEEEGEESDREEEEEI 752
Score = 41.2 bits (95), Expect = 0.11
Identities = 34/102 (33%), Positives = 51/102 (49%), Gaps = 11/102 (10%)
Query: 305 EETLVVEVEGEGEEGVVKDEEEEGEA--KDEEEEEDGVVVKDEVDGSGDVKMGGVEENQV 362
EET VE E + EE +EEEE E +E+EE DG +DE S + EE +
Sbjct: 664 EETDRVEEEEDAEE----NEEEEEEESNSEEDEESDGEEEEDEESDSEE-----DEEEES 714
Query: 363 QELEEHNIELSLGQDKVETLPVEKEQGEGEQMMDFEQSKKEE 404
+ EE E +++ E E+E+GE + E+ KK++
Sbjct: 715 ESEEEEGEESESEEEEGEESESEEEEGEESDREEEEEIKKKK 756
>gb|AAH83371.1| TRDN protein [Danio rerio]
Length = 535
Score = 67.8 bits (164), Expect = 1e-09
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 26/238 (10%)
Query: 242 THIMTKDVMQQLGLIKEGNLEKMDWAGLMWSMLEKELKATHLEECYYASHLQHLIKSQHK 301
T I K+++++ G E E+ E+E+ EE Y ++ + + +
Sbjct: 151 TEIWAKEMLEEEGEYLEDEEEEE----------EEEMDTDEEEEDYEEEEEEYDEELEEE 200
Query: 302 ELFEETLVVEVEGEGEEGVVKD--EEEEGEAKDEEEEEDGVVVKDEVDGSGDVKMGGVEE 359
E EE L E E E EE K+ EEEE E +EE+EE GV V +E + + + +E
Sbjct: 201 EEEEEELEEEEEEELEEEEEKELEEEEEDEEDEEEKEEPGVKVVEEKEEEDEEEAKEEKE 260
Query: 360 NQVQELEEHNIELSLGQDKVETLPV------EKEQGEGEQMMDFEQSK--------KEET 405
+ +E +E E +D+ + ++E G E+ D E+ K +EE
Sbjct: 261 KKEEEEDEEEAEAEEEEDEEAATEIAAKEKKKEEAGAKEEDEDEEEGKEEKSEEKEEEEP 320
Query: 406 EMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVEEDEHD 463
E ++ E + + + D E+ KE EG+E E +EE ED+ E++E +
Sbjct: 321 EAMEEDEEKEEAEKKEKQEAGAEEEDEDEEEAKEMEGDEAETSKEEAPEDEEEKEEEE 378
Score = 39.3 bits (90), Expect = 0.40
Identities = 42/181 (23%), Positives = 80/181 (43%), Gaps = 26/181 (14%)
Query: 297 KSQHKELFEETLVVEVEGEGEEGVVKDEEEEG-EAKDEEEEEDGVVVKDEVDGSGDVKMG 355
KS+ KE EE +E + E EE K+++E G E +DE+EEE + DE + S +
Sbjct: 311 KSEEKEE-EEPEAMEEDEEKEEAEKKEKQEAGAEEEDEDEEEAKEMEGDEAETSKEEAPE 369
Query: 356 GVEENQVQELEEHNIELSLGQDKVETLPVEKEQ-----------------GEGEQMMDFE 398
EE + +E E E ++ E EKE+ E E+ + +
Sbjct: 370 DEEEKEEEEPETDKEEAPEDEEGKEEEEDEKEEAASAAPEKKAAPIPAAPKEAEEADEED 429
Query: 399 QSKKEETEMWFLGQKNYVGEPSLRPCHNRDRKGIDCEQVKEDEGEEEEHEQEEEEEDDVE 458
K E + ++ G+ + P + + D+ ++++ +++E++DDV+
Sbjct: 430 DDKDAEAQ-----EEPPAGK--VTPAETDETETPIAVTPTTDDDQKDDQIEKKEDDDDVQ 482
Query: 459 E 459
+
Sbjct: 483 D 483
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.131 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,235,575,882
Number of Sequences: 2540612
Number of extensions: 63341151
Number of successful extensions: 1057414
Number of sequences better than 10.0: 10719
Number of HSP's better than 10.0 without gapping: 3617
Number of HSP's successfully gapped in prelim test: 7720
Number of HSP's that attempted gapping in prelim test: 703663
Number of HSP's gapped (non-prelim): 100182
length of query: 652
length of database: 863,360,394
effective HSP length: 135
effective length of query: 517
effective length of database: 520,377,774
effective search space: 269035309158
effective search space used: 269035309158
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 78 (34.7 bits)
Medicago: description of AC144893.11