BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144806.1 + phase: 0
(260 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM98242.1| putative protein [Arabidopsis thaliana] gi|425679... 118 1e-25
gb|AAF26111.1| hypothetical protein [Arabidopsis thaliana] gi|61... 109 9e-23
gb|AAU44469.1| hypothetical protein AT3G03130 [Arabidopsis thali... 108 1e-22
ref|XP_467309.1| unknown protein [Oryza sativa (japonica cultiva... 76 8e-13
ref|XP_462683.1| OSJNBa0093F12.13 [Oryza sativa (japonica cultiv... 69 1e-10
ref|NP_177800.1| expressed protein [Arabidopsis thaliana] gi|254... 48 2e-04
ref|NP_911357.1| hypothetical protein [Oryza sativa (japonica cu... 48 3e-04
gb|EAL20321.1| hypothetical protein CNBF1320 [Cryptococcus neofo... 45 0.003
gb|AAW44114.1| general RNA polymerase II transcription factor, p... 45 0.003
emb|CAH00444.1| unnamed protein product [Kluyveromyces lactis NR... 44 0.004
gb|EAL18089.1| hypothetical protein CNBK1100 [Cryptococcus neofo... 44 0.006
gb|AAW46199.1| hypothetical protein CNK02450 [Cryptococcus neofo... 44 0.006
gb|AAL13053.1| platelet binding protein GspB [Streptococcus gord... 42 0.017
emb|CAE75226.1| Hypothetical protein CBG23176 [Caenorhabditis br... 42 0.017
ref|YP_187464.1| LPXTG cell wall surface anchor family protein [... 42 0.022
emb|CAG44357.1| putative cell wall-anchored protein [Staphylococ... 42 0.022
dbj|BAB58816.1| serine-threoinine rich antigen [Staphylococcus a... 42 0.022
dbj|BAB96440.1| MW2575 [Staphylococcus aureus subsp. aureus MW2]... 42 0.022
gb|AAP68304.1| At1g13350 [Arabidopsis thaliana] gi|15450802|gb|A... 41 0.029
ref|NP_563928.3| protein kinase family protein [Arabidopsis thal... 41 0.029
>gb|AAM98242.1| putative protein [Arabidopsis thaliana]
gi|42567905|ref|NP_197218.2| expressed protein
[Arabidopsis thaliana]
Length = 569
Score = 118 bits (296), Expect = 1e-25
Identities = 87/236 (36%), Positives = 124/236 (51%), Gaps = 45/236 (19%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNQREGGDIGTPA-- 58
MDFH+L R++LQ L K NKIPAN+TN+AMADAL +L V+GLDE +NQ E +P
Sbjct: 1 MDFHSLLRRDLQFLCKRNKIPANMTNIAMADALKSLEIVDGLDEYMNQSESSAPHSPTSV 60
Query: 59 --VQPRTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAE--GEVEQENLDANVDAGTPA 114
+ P TA RTT +RK +AE S V+R R G+++QEN++ NV
Sbjct: 61 AKLPPSTATRTT-RRKTTTKAEPQPSSQLVSRSCRSTSKSLAGDMDQENINKNVA----- 114
Query: 115 VVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRN 174
++ S V+ +A +V KTPAA + +T A S
Sbjct: 115 -------------------------QEMKTSNVKFEA-NVLKTPAAGSTRKTSAATSCTK 148
Query: 175 KTEISDGTSVQKAYSTRRSVRLVGKSLSKMSL--ADTEDMESTKNDDVSEEMSVSQ 228
K E+ VQ YSTRRS RL+ K ++ +SL +T D + KN+D +++S +
Sbjct: 149 KDEL-----VQSVYSTRRSTRLLEKCMADLSLKTKETVDNKPAKNEDTEQKVSAQE 199
>gb|AAF26111.1| hypothetical protein [Arabidopsis thaliana]
gi|61742693|gb|AAX55167.1| hypothetical protein
At3g03130 [Arabidopsis thaliana]
gi|15228466|ref|NP_186963.1| expressed protein
[Arabidopsis thaliana]
Length = 520
Score = 109 bits (272), Expect = 9e-23
Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILN-QREGGDIGTPAV 59
MDFH+L R++LQ K NKIPAN+TN+AMADAL L VEG+DE ++ R+
Sbjct: 1 MDFHSLPRRDLQFFCKRNKIPANMTNIAMADALRDLEIVEGMDEFMDPSRDQSPTSVARN 60
Query: 60 QP---RTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVV 116
P RTA RTT ++ E +S+++ TR +A GE++QEN D N+ P+ V
Sbjct: 61 LPSAARTAARTTRRKSTKDETQSSELVTRSCYVVSKSLA-GEMDQENKDMNM-LQNPS-V 117
Query: 117 PTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKT 176
P SR V D +D++ E +V+KTPAA + R +A S +
Sbjct: 118 PQSR--------------AVKLDVNDIMPE-----ANVSKTPAARSTRRAQAAASSKK-- 156
Query: 177 EISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
SVQ+ YSTRRSVRL+ +S++ +SL ++ ++ + +E
Sbjct: 157 ----DESVQRVYSTRRSVRLLEESMADLSLKTNVPVKKHEDSPAGSKFQAKSDENSENTD 212
Query: 237 ENGML 241
+ G++
Sbjct: 213 KGGVM 217
>gb|AAU44469.1| hypothetical protein AT3G03130 [Arabidopsis thaliana]
Length = 520
Score = 108 bits (271), Expect = 1e-22
Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 32/245 (13%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILN-QREGGDIGTPAV 59
MDFH+L R++LQ K NKIPAN+TN+AMADAL L VEG+DE ++ R+
Sbjct: 1 MDFHSLPRRDLQFFCKRNKIPANMTNIAMADALRDLEIVEGMDEFMDPSRDQSPTSVARN 60
Query: 60 QP---RTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVV 116
P RTA RTT ++ E +S+++ TR +A GE++QEN D N+ P+ V
Sbjct: 61 LPSAARTAARTTRRKSTKDETQSSELVTRSCYVVSKSLA-GEMDQENKDMNM-LQNPS-V 117
Query: 117 PTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKT 176
P SR V D +D++ E +V+KTPAA + R +A S +
Sbjct: 118 PQSR--------------AVKLDVNDIMPE-----ANVSKTPAARXTRRAQAAASSKK-- 156
Query: 177 EISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
SVQ+ YSTRRSVRL+ +S++ +SL ++ ++ + +E
Sbjct: 157 ----DESVQRVYSTRRSVRLLEESMADLSLKTNVPVKKHEDSPAGSKFQAKSDENSENTD 212
Query: 237 ENGML 241
+ G++
Sbjct: 213 KGGVM 217
>ref|XP_467309.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|41052968|dbj|BAD07878.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 668
Score = 76.3 bits (186), Expect = 8e-13
Identities = 80/268 (29%), Positives = 113/268 (41%), Gaps = 47/268 (17%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNQREGGDIGTPAVQ 60
MDFH LSR+ELQAL K N + AN+TN AMADAL +LP V+G+DE IGT A+
Sbjct: 11 MDFHALSRRELQALCKRNGVRANMTNAAMADALQSLPTVDGVDE---------IGTAALC 61
Query: 61 PRTARRTTTQRKPVKEA--------------ESTKVSTRVNRGGRGGVAEGEVEQENLDA 106
T R +T + +K A +VS R V EGE E +
Sbjct: 62 LPTPSR-STMKSALKAAAAIGEEQQHGSPLPRGRRVSVMSPEAIRLDVEEGEDEMKRDLV 120
Query: 107 NVDAGTPAVV--PTSRRR------VPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTP 158
TP V TSRR +P +T R+ +E ++ A
Sbjct: 121 KEIVRTPGVALRSTSRRARATPAPIPTPATTRRTAAARKVEEAAPTPATLRRSQRTAARK 180
Query: 159 AAAP------SSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDM 212
AAAP +++T RS R+K + V+ + V K+ D +D+
Sbjct: 181 AAAPVVEEVTATKTTTRRSARSKVMVDLEQEVEDMAVALQEV--------KVQEEDPKDV 232
Query: 213 ESTKNDDVSEEMS-VSQNEGGSIETENG 239
S + D EE + + +E+E G
Sbjct: 233 ASDEKCDEEEEATKILGGNSKEVESEEG 260
>ref|XP_462683.1| OSJNBa0093F12.13 [Oryza sativa (japonica cultivar-group)]
gi|39545861|emb|CAE03939.3| OSJNba0093F12.13 [Oryza
sativa (japonica cultivar-group)]
gi|50928421|ref|XP_473738.1| OSJNBa0093F12.13 [Oryza
sativa (japonica cultivar-group)]
Length = 760
Score = 68.9 bits (167), Expect = 1e-10
Identities = 75/283 (26%), Positives = 110/283 (38%), Gaps = 60/283 (21%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNQREG---GDIGTP 57
MDFH L R++LQAL K N + AN+TN AMADAL+ L V+G++E + Q P
Sbjct: 1 MDFHALPRRDLQALCKRNGVRANMTNAAMADALAKLATVDGIEEFVKQAVALPPAPATKP 60
Query: 58 AVQ---------------PRTARRTTTQRKPV------KEAESTKVSTRVNRGGRGGVAE 96
AV+ PR R T + + V +EA + RG RG V
Sbjct: 61 AVKAVAEEDPREKKGSPLPRGRRVTVSSPEVVNLDDSDEEAPGQSKDAPLPRGRRGTVRS 120
Query: 97 GEV-----------EQENLDANVDA-------------GTPAVVPTSRRRVPAVSTRRKK 132
++ E EN N P V PT+RRR S
Sbjct: 121 SKLIRPDDGEEEGKEDENRGENAPVHGEGRRGASRRARAEPVVAPTTRRRAAPTSKIETG 180
Query: 133 EVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRR 192
+V V + + + + A AP++R RA +V E +K RR
Sbjct: 181 DVAV----EAPPAPTTRRRPQTSTEAAPAPTTRRRAQSTVAASAE-------EKVPRGRR 229
Query: 193 SVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIE 235
+ R M +T + + + + EE V + +G +E
Sbjct: 230 TTRRAAAKKPDMLEEETREPLAPEQNSAHEE-PVQEEQGIEVE 271
>ref|NP_177800.1| expressed protein [Arabidopsis thaliana] gi|25406464|pir||H96795
hypothetical protein F28O16.11 [imported] - Arabidopsis
thaliana gi|6143891|gb|AAF04437.1| hypothetical protein;
42007-47249 [Arabidopsis thaliana]
Length = 1532
Score = 48.1 bits (113), Expect = 2e-04
Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 46/288 (15%)
Query: 1 MDFHTLSRKELQALSKMNKIPANITNVAMADALSAL--PHVEG-LDEILNQREGG----- 52
M+FH + RK+LQAL K N IPAN+ N+ MA L+++ EG L + ++ E
Sbjct: 1 MNFHGMKRKDLQALCKKNGIPANLKNIEMATRLASVLQKETEGTLTDTISLSEDSVDVLE 60
Query: 53 -DIGTPAVQ--------------PRTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEG 97
D+ V+ R R+ ++RK + + S R G+
Sbjct: 61 DDVAVKKVRFSPENEVFEFTRSLKRCQRKYVSKRKVQESGIELRRSKRSVAKGKAIAGSS 120
Query: 98 EVEQENLDANVDAGTPAV-VPTSRRRVPAVSTRRK----KEVIVIE-------------- 138
E E N T A+ VP +R + + ++ E++ +E
Sbjct: 121 ENESNTRRGNRSDVTKAIEVPRRSKRSGSTGSSQEDCKVTELMALEQFEFENISEGLSGS 180
Query: 139 DEDDVVSEVQGKATD--VAKTPAAAPSSRTRAGRSVR-NKTEISDGTSVQKAYSTRRSVR 195
D+D E G+ + ++KT P ++++ ++ N+ E+ + + RRS+R
Sbjct: 181 DQDGFKFEKIGRRSTQLISKTGNLLPVNKSKRLVDIKDNEDELVKNNVNEVSMDQRRSIR 240
Query: 196 LVGKSLSKMSLADTED-MESTKNDDVSEEMSVSQNEGGSIETENGMLI 242
L ++ ++ ++ D + EE+ + Q++ ++ + L+
Sbjct: 241 LKARAANQSMGGESSDGRPLCSAKETKEEIKIKQSKRSTVVSSQKELV 288
>ref|NP_911357.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50509959|dbj|BAD30369.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|22202781|dbj|BAC07437.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 149
Score = 47.8 bits (112), Expect = 3e-04
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 5 TLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNQREGGDIGTPAVQPRTA 64
TLS +ELQA+ K N AN+TN M DAL LP V+G+ +I + + P T
Sbjct: 14 TLSHRELQAMCKRNDGHANMTNATMTDALQLLPSVDGIHKI----DTTALCLPTPSRLTM 69
Query: 65 RRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVD 109
+ V E E + + + RG R V E Q + + D
Sbjct: 70 KSALKAASAVGEEEQQQHGSPLPRGRRVSVKSLEAIQMDFEEGED 114
>gb|EAL20321.1| hypothetical protein CNBF1320 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 998
Score = 44.7 bits (104), Expect = 0.003
Identities = 51/191 (26%), Positives = 79/191 (40%), Gaps = 17/191 (8%)
Query: 56 TPAV--QPRTAR--RTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGE----VEQENLDAN 107
TP V QPR +R RT T+R EA S +V ++ + G G+ E + D +
Sbjct: 274 TPVVRRQPRPSRPTRTLTKRHTKSEARSRRVRAQLTKKVNGKSENGDEIELTESSDSDDD 333
Query: 108 VDA--GTPAVVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSR 165
V+ TP V R V + K+ I D +D E +AT+V + P P R
Sbjct: 334 VNGIESTPIVKRLRPRGVGERKSFMKEPSTDITDFEDDAEEADAEATEVEEEP--QPKER 391
Query: 166 TRAGRSVRNKTEISDGTSVQKAYST--RRSVRLVGKSLSKMSLADTEDMESTKND---DV 220
+S+ + G + A ++ R S L + K ++ + ES D +V
Sbjct: 392 KLRRKSISQASLSKYGGDIDMAPTSEQRSSKNLPTRGAKKKAIQRMQGGESGTEDEDMEV 451
Query: 221 SEEMSVSQNEG 231
EE + EG
Sbjct: 452 DEERDIGMKEG 462
>gb|AAW44114.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
gi|58268530|ref|XP_571421.1| general RNA polymerase II
transcription factor, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 998
Score = 44.7 bits (104), Expect = 0.003
Identities = 51/191 (26%), Positives = 79/191 (40%), Gaps = 17/191 (8%)
Query: 56 TPAV--QPRTAR--RTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGE----VEQENLDAN 107
TP V QPR +R RT T+R EA S +V ++ + G G+ E + D +
Sbjct: 274 TPVVRRQPRPSRPTRTLTKRHTKSEARSRRVRAQLTKKVNGKSENGDEIELTESSDSDDD 333
Query: 108 VDA--GTPAVVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSR 165
V+ TP V R V + K+ I D +D E +AT+V + P P R
Sbjct: 334 VNGIESTPIVKRLRPRGVGERKSFMKEPSTDITDFEDDAEEADAEATEVEEEP--QPKER 391
Query: 166 TRAGRSVRNKTEISDGTSVQKAYST--RRSVRLVGKSLSKMSLADTEDMESTKND---DV 220
+S+ + G + A ++ R S L + K ++ + ES D +V
Sbjct: 392 KLRRKSISQASLSKYGGDIDMAPTSEQRSSKNLPTRGAKKKAIQRMQGGESGTEDEDMEV 451
Query: 221 SEEMSVSQNEG 231
EE + EG
Sbjct: 452 DEERDIGMKEG 462
>emb|CAH00444.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50306747|ref|XP_453348.1| unnamed protein product
[Kluyveromyces lactis]
Length = 1423
Score = 43.9 bits (102), Expect = 0.004
Identities = 36/186 (19%), Positives = 68/186 (36%)
Query: 53 DIGTPAVQPRTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGT 112
D T + + + + + +ES + V+ G +E E++ + T
Sbjct: 378 DESTSTTEAASTSENVSTAESTESSESPTSTEDVSTGESTESSESPTSTEDVSTDESTST 437
Query: 113 PAVVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSV 172
TS A ST + ED S +A ++ + S+ + +
Sbjct: 438 TEAASTSENVSTAESTESSESPTSTEDVSTDESTSTTEAASTSENVSTGESTESSESPTS 497
Query: 173 RNKTEISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGG 232
+ TS +A ST +V + S S TED+ + ++ +E S S+N
Sbjct: 498 TEDVSTDESTSTTEAASTSENVSTAESTESSESPTSTEDVSTDESTSTTEAASTSENVST 557
Query: 233 SIETEN 238
+ TE+
Sbjct: 558 AESTES 563
Score = 38.5 bits (88), Expect = 0.19
Identities = 35/162 (21%), Positives = 62/162 (37%), Gaps = 18/162 (11%)
Query: 77 AESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVIV 136
+ES + V+ G +E E++ + T TS A ST +
Sbjct: 258 SESVSTTEDVSTGESTESSESPTSTEDVSTDESTSTTEAASTSENVSTAESTESSESPTS 317
Query: 137 IEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVRL 196
ED G++T+ +++P + T + TS +A ST +V
Sbjct: 318 TEDVST------GESTESSESPTSTEDVST------------DESTSTTEAASTSENVST 359
Query: 197 VGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETEN 238
+ S S TED+ + ++ +E S S+N + TE+
Sbjct: 360 AESTESSESPTSTEDVSTDESTSTTEAASTSENVSTAESTES 401
Score = 36.2 bits (82), Expect = 0.94
Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 5/192 (2%)
Query: 56 TPAVQPRTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAV 115
T + + T+ + + E+ S V+ +E E++ + T
Sbjct: 417 TESSESPTSTEDVSTDESTSTTEAASTSENVSTAESTESSESPTSTEDVSTDESTSTTEA 476
Query: 116 VPTSRRRVPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNK 175
TS ST + ED S +A ++ + A S+ + +
Sbjct: 477 ASTSENVSTGESTESSESPTSTEDVSTDESTSTTEAASTSENVSTAESTESSESPTSTED 536
Query: 176 TEISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDME-----STKNDDVSEEMSVSQNE 230
+ TS +A ST +V + S S TED+ ST++ + E ++ +
Sbjct: 537 VSTDESTSTTEAASTSENVSTAESTESSESPTSTEDVSIEEWTSTESFESISESQLTSTD 596
Query: 231 GGSIETENGMLI 242
+ ++NG I
Sbjct: 597 ATTTVSQNGTTI 608
>gb|EAL18089.1| hypothetical protein CNBK1100 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1285
Score = 43.5 bits (101), Expect = 0.006
Identities = 58/194 (29%), Positives = 86/194 (43%), Gaps = 25/194 (12%)
Query: 54 IGTPAVQPRTARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTP 113
+ TP+V T+R + ++R P E + +R RG AE E + + P
Sbjct: 1070 VETPSVPEPTSRSSRSRRAPSNEPSTGAGMSRSTRG--KSTAEPEEKPIVEEEPPVHPVP 1127
Query: 114 AVVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSE-VQGK-------ATDVAKTPAAAPSSR 165
AV T R A ST RK V V E ++VVS+ +GK A+T A S+
Sbjct: 1128 AVASTRSRSTSARST-RKASVEVDEKPEEVVSKPTRGKKILSQIEEQPAAETVAEKKSAP 1186
Query: 166 TRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMS 225
TRA R++ + TS +TRR V S S T S+ + D E++S
Sbjct: 1187 TRAKRAI----PTASATSTTSTTTTRRVV-------SAPSRTKTSTAASSASTD--EKVS 1233
Query: 226 V-SQNEGGSIETEN 238
V ++ +G + E EN
Sbjct: 1234 VPTRRKGKTAEKEN 1247
>gb|AAW46199.1| hypothetical protein CNK02450 [Cryptococcus neoformans var.
neoformans JEC21] gi|58260612|ref|XP_567716.1|
hypothetical protein CNK02450 [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1283
Score = 43.5 bits (101), Expect = 0.006
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 27/195 (13%)
Query: 54 IGTPAVQPRTARRTTTQRKPVKEAESTKVSTRVNRG-GRGGVAEGEVEQENLDANVDAGT 112
+ TP+V T+R + ++R P E + +R RG E + +E ++
Sbjct: 1068 VETPSVPEPTSRSSRSRRAPSNEPSTGAGMSRSTRGKSTAEPEEKPIVEEEPPVHL---V 1124
Query: 113 PAVVPTSRRRVPAVSTRRKKEVIVIEDEDDVVSE-VQGK-------ATDVAKTPAAAPSS 164
PAV T R A ST RK V V E ++VVS+ +GK A+T A S+
Sbjct: 1125 PAVASTRSRSTSARST-RKASVEVDEKPEEVVSKPTRGKKILSQIEEQPAAETVAEKKSA 1183
Query: 165 RTRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEM 224
TRA R++ + TS +TRR V S S T S+ + D E++
Sbjct: 1184 PTRAKRAI----PTASATSTTSTTTTRRVV-------SAPSRTKTSTAASSASTD--EKV 1230
Query: 225 SV-SQNEGGSIETEN 238
SV ++ +G + E EN
Sbjct: 1231 SVPTRRKGKTAEKEN 1245
>gb|AAL13053.1| platelet binding protein GspB [Streptococcus gordonii]
Length = 3072
Score = 42.0 bits (97), Expect = 0.017
Identities = 39/170 (22%), Positives = 63/170 (36%), Gaps = 2/170 (1%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T+ + ST S N + E + A+V A A S +
Sbjct: 2816 STSASVSASTSASTSASVSANESASTSASVSASESASTSASVSASESASTSASVSASESA 2875
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQK 186
ST V E S + + + +A+ S+ T A S S S +
Sbjct: 2876 ST--SASVSASESASTSASVSASTSASTSASVSASESASTSASASASESASTSASVSASE 2933
Query: 187 AYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
+ ST SV + + S++ +E + + VSE MSVS++ SI T
Sbjct: 2934 SASTSASVSASESASTSASVSASESASTNASVSVSESMSVSESLSLSIST 2983
Score = 33.9 bits (76), Expect = 4.6
Identities = 37/171 (21%), Positives = 62/171 (35%), Gaps = 6/171 (3%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T+ + ST S + + E + A+V A T A S +
Sbjct: 2468 STSASVSASTSASTSASVSASESASTSASVSASESASTSASVSASTSASTSASVSASESA 2527
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQK 186
ST V E S ++ + + +A+ S+ T A S S S +
Sbjct: 2528 ST--SASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASE 2585
Query: 187 AYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMS----VSQNEGGS 233
+ ST SV + + S++ + ++ + VSE S VS NE S
Sbjct: 2586 SASTSASVSASESASTSASVSASMSASTSASVSVSESTSTSASVSANESAS 2636
Score = 33.9 bits (76), Expect = 4.6
Identities = 40/167 (23%), Positives = 58/167 (33%), Gaps = 10/167 (5%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T+ V E+ ST S N + E + A+V A A S +
Sbjct: 2612 STSASVSVSESTSTSASVSANESASTSASVSASESASTSASVSASESASTSASVSASESA 2671
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQK 186
ST V E S ++ + + +A+ S+ T A S S S +
Sbjct: 2672 ST--SASVSASESASTSASVSASESASTSASVSASESASTSASVSASESASTSASVSASE 2729
Query: 187 AYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGS 233
+ ST SV S S+ + ST S SVS NE S
Sbjct: 2730 SASTSASV-----SASESASTSASVSASTS---ASTSASVSANESAS 2768
>emb|CAE75226.1| Hypothetical protein CBG23176 [Caenorhabditis briggsae]
Length = 356
Score = 42.0 bits (97), Expect = 0.017
Identities = 27/106 (25%), Positives = 52/106 (48%), Gaps = 3/106 (2%)
Query: 125 AVSTRRKKEVIVIEDEDDVVSEVQGKATDV--AKTPAAAPSSRTRAGRSVRNKTEISDGT 182
A + K +V ED++ + + +GK T V KTPAA+P+S T S TE G
Sbjct: 203 AAAAAAKVAEVVEEDDEPIKKKDEGKTTKVKTVKTPAASPASSTTTAASSSTSTEFPVGE 262
Query: 183 SVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQ 228
+ + + V + L+ L +++D+ D++ ++++ S+
Sbjct: 263 EIVPD-TNEKEVDISELHLTDDPLCNSDDLRKVVIDNIDDQLNSSK 307
>ref|YP_187464.1| LPXTG cell wall surface anchor family protein [Staphylococcus aureus
subsp. aureus COL] gi|57286580|gb|AAW38674.1| LPXTG cell
wall surface anchor family protein [Staphylococcus aureus
subsp. aureus COL]
Length = 2261
Score = 41.6 bits (96), Expect = 0.022
Identities = 45/184 (24%), Positives = 78/184 (41%), Gaps = 12/184 (6%)
Query: 76 EAESTKVSTRVNRGGRGGVA----EGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRK 131
+++S ST V+ G V+ + E E+ + V TS +VST +
Sbjct: 1715 DSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSCSQSMSDSVSTSDSSSLSVSTSLR 1774
Query: 132 KEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTR 191
V E + S+ +T + + + + S+ SV T +SD S+ + ST
Sbjct: 1775 SSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTS 1834
Query: 192 RSVRLVGK-------SLSKM-SLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLIS 243
S L G SLS SL+D++ + S+++ SE S S ++ S T N S
Sbjct: 1835 DSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDS 1894
Query: 244 LCLT 247
+ ++
Sbjct: 1895 MSIS 1898
Score = 37.4 bits (85), Expect = 0.42
Identities = 33/172 (19%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 76 EAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVI 135
+ ST +S + + ++ + +L ++ T + T +VST
Sbjct: 1513 DLSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1572
Query: 136 VIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVR 195
E D S + +++ +A+ S+ T S T S TS++ + S +S
Sbjct: 1573 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQS-- 1630
Query: 196 LVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
MSL+ + + + +S+ +S S ++ S T M +S+ L+
Sbjct: 1631 --------MSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLS 1674
Score = 36.2 bits (82), Expect = 0.94
Identities = 30/178 (16%), Positives = 67/178 (36%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T+ +++S VS+ ++ G +E + ++ + S +
Sbjct: 1016 STSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSQSTSQSGSTSTST 1075
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQK 186
ST + +S Q + ++ + + + S A + S TS
Sbjct: 1076 STSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSG 1135
Query: 187 AYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISL 244
+ ST S+ + S++D+ + ++++D +SE S S + +I ISL
Sbjct: 1136 SVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASESTFISL 1193
Score = 35.8 bits (81), Expect = 1.2
Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 12/184 (6%)
Query: 74 VKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKE 133
+ ++S +ST + G +E + + ++ ++ T TS + ST
Sbjct: 1323 ISTSKSDSISTSTSLSG--STSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLS 1380
Query: 134 VIVIEDEDDVVSEVQGKA------TDVAKTPAAAPSS----RTRAGRSVRNKTEISDGTS 183
+ ++ V S ++ T +++ + + SS T S T +SD TS
Sbjct: 1381 LSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSSYTSQSTSQSESTSTSTSLSDSTS 1440
Query: 184 VQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLIS 243
+ K+ S SV S +D++ + ++ ++ SE S S ++ S S
Sbjct: 1441 ISKSTSQSGSVSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTS 1500
Query: 244 LCLT 247
L+
Sbjct: 1501 TSLS 1504
Score = 34.3 bits (77), Expect = 3.6
Identities = 29/171 (16%), Positives = 70/171 (39%), Gaps = 4/171 (2%)
Query: 63 TARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRR 122
+A +T+ R +++S +ST + + + ++ + A T + S
Sbjct: 1614 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISL 1673
Query: 123 VPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGT 182
+ ST ++ +S+ Q + V + + + S+ +S+ T +SD
Sbjct: 1674 SDSTSTSTSASEVMSAS----ISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSG 1729
Query: 183 SVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGS 233
S+ + S R+S + S S + ++ + ++ + +S S+ +E S
Sbjct: 1730 SLSVSTSLRKSESVSESSSLSCSQSMSDSVSTSDSSSLSVSTSLRSSESVS 1780
>emb|CAG44357.1| putative cell wall-anchored protein [Staphylococcus aureus subsp.
aureus MSSA476] gi|49487433|ref|YP_044654.1| putative
cell wall-anchored protein [Staphylococcus aureus subsp.
aureus MSSA476]
Length = 2275
Score = 41.6 bits (96), Expect = 0.022
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 25 TNVAMADALSA-LPHVEGLDEILNQREGGDIGTPAVQPRTARRTTTQRKPVKEAESTKVS 83
T+ + ++ +SA + + + E +N E ++ +T+ V ++ S VS
Sbjct: 1689 TSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTS----VSDSGSLSVS 1744
Query: 84 TRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVIVIEDEDDV 143
T + + +E E +L + V TS +VST + V E +
Sbjct: 1745 TSLRK------SESVSESSSLSGSQSMSDS--VSTSDSSSLSVSTSLRSSESVSESDSLS 1796
Query: 144 VSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGK---- 199
S+ +T + + + + S+ SV T +SD S+ + ST S L G
Sbjct: 1797 DSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLS 1856
Query: 200 ---SLSKM-SLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
SLS SL+D++ + S+++ SE S S ++ S T N S+ ++
Sbjct: 1857 GSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSIS 1908
Score = 38.1 bits (87), Expect = 0.25
Identities = 33/172 (19%), Positives = 69/172 (39%), Gaps = 10/172 (5%)
Query: 76 EAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVI 135
++ ST +S + + ++ + +L ++ T + T +VST
Sbjct: 1523 DSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1582
Query: 136 VIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVR 195
E D S + +++ +A+ S+ T S T S TS++ + S +S
Sbjct: 1583 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQS-- 1640
Query: 196 LVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
MSL+ + + + +S+ +S S ++ S T M +S+ L+
Sbjct: 1641 --------MSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLS 1684
Score = 36.6 bits (83), Expect = 0.72
Identities = 34/181 (18%), Positives = 77/181 (41%), Gaps = 6/181 (3%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAV-VPTSRRRVPA 125
+T+ +++S VS+ ++ G +E + ++ D+ + ++ + TS+ +
Sbjct: 1016 STSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTS---DSDSKSLSLSTSQSGSTS 1072
Query: 126 VSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDG--TS 183
ST V E + S ++ ++ + + + S+ S + IS TS
Sbjct: 1073 TSTSTSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTS 1132
Query: 184 VQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLIS 243
+ ST S+ + S++D+ + ++++D +SE S S + +I IS
Sbjct: 1133 TSGSVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASESTFIS 1192
Query: 244 L 244
L
Sbjct: 1193 L 1193
Score = 35.4 bits (80), Expect = 1.6
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 63 TARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRR 122
+A +T+ R +++S +ST + + + ++ + A T + S
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISL 1683
Query: 123 VPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD-- 180
+ ST ++ +S+ Q + V + + + S+ +S+ T +SD
Sbjct: 1684 SDSTSTSTSASEVMSAS----ISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSG 1739
Query: 181 ----GTSVQKAYSTRRSVRLVG-KSLS-------KMSLADTEDMESTKNDDVSEEMSVSQ 228
TS++K+ S S L G +S+S SL+ + + S+++ S+ +S S+
Sbjct: 1740 SLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSK 1799
Query: 229 NEGGSIETENGMLIS 243
+ GS T +S
Sbjct: 1800 STSGSTSTSTSGSLS 1814
Score = 35.0 bits (79), Expect = 2.1
Identities = 35/191 (18%), Positives = 73/191 (37%), Gaps = 10/191 (5%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T++ + + S ST + +E + + ++ ++ T TS +
Sbjct: 1324 STSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSD 1383
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKA------TDVAKTPAAAPSS----RTRAGRSVRNKT 176
ST + ++ V S ++ T +++ + + SS T S T
Sbjct: 1384 STSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSSYTSQSTSQSESTSTST 1443
Query: 177 EISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
+SD TS+ K+ S SV S +D++ + ++ ++ SE S S ++ S
Sbjct: 1444 SLSDSTSISKSTSQSGSVSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSN 1503
Query: 237 ENGMLISLCLT 247
S L+
Sbjct: 1504 SGSASTSTSLS 1514
>dbj|BAB58816.1| serine-threoinine rich antigen [Staphylococcus aureus subsp. aureus
Mu50] gi|15928240|ref|NP_375773.1| hypothetical protein
SA2447 [Staphylococcus aureus subsp. aureus N315]
gi|13702612|dbj|BAB43752.1| SA2447 [Staphylococcus aureus
subsp. aureus N315] gi|25507441|pir||F90073 hypothetical
protein SA2447 [imported] - Staphylococcus aureus (strain
N315) gi|15925644|ref|NP_373178.1| serine-threoinine rich
antigen [Staphylococcus aureus subsp. aureus Mu50]
Length = 2271
Score = 41.6 bits (96), Expect = 0.022
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 25 TNVAMADALSA-LPHVEGLDEILNQREGGDIGTPAVQPRTARRTTTQRKPVKEAESTKVS 83
T+ + ++ +SA + + + E +N E ++ +T+ V ++ S VS
Sbjct: 1689 TSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTS----VSDSGSLSVS 1744
Query: 84 TRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVIVIEDEDDV 143
T + + +E E +L + V TS +VST + V E +
Sbjct: 1745 TSLRK------SESVSESSSLSGSQSMSDS--VSTSDSSSLSVSTSLRSSESVSESDSLS 1796
Query: 144 VSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGK---- 199
S+ +T + + + + S+ SV T +SD S+ + ST S L G
Sbjct: 1797 DSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLS 1856
Query: 200 ---SLSKM-SLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
SLS SL+D++ + S+++ SE S S ++ S T N S+ ++
Sbjct: 1857 GSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSIS 1908
Score = 38.1 bits (87), Expect = 0.25
Identities = 33/172 (19%), Positives = 69/172 (39%), Gaps = 10/172 (5%)
Query: 76 EAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVI 135
++ ST +S + + ++ + +L ++ T + T +VST
Sbjct: 1523 DSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1582
Query: 136 VIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVR 195
E D S + +++ +A+ S+ T S T S TS++ + S +S
Sbjct: 1583 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQS-- 1640
Query: 196 LVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
MSL+ + + + +S+ +S S ++ S T M +S+ L+
Sbjct: 1641 --------MSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLS 1684
Score = 35.4 bits (80), Expect = 1.6
Identities = 34/181 (18%), Positives = 77/181 (41%), Gaps = 6/181 (3%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAV-VPTSRRRVPA 125
+T+ +++S VS+ ++ G +E + ++ D+ + ++ + TS+ +
Sbjct: 1016 STSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTS---DSDSKSLSLSTSQSGSTS 1072
Query: 126 VSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDG--TS 183
ST V E + S ++ ++ + + + S+ S + IS TS
Sbjct: 1073 TSTSTSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTS 1132
Query: 184 VQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLIS 243
+ ST S+ + S++D+ + ++++D +SE S S + +I IS
Sbjct: 1133 TSGSVSTSTSLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASESTSIS 1192
Query: 244 L 244
L
Sbjct: 1193 L 1193
Score = 35.4 bits (80), Expect = 1.6
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 63 TARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRR 122
+A +T+ R +++S +ST + + + ++ + A T + S
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISL 1683
Query: 123 VPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD-- 180
+ ST ++ +S+ Q + V + + + S+ +S+ T +SD
Sbjct: 1684 SDSTSTSTSASEVMSAS----ISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSG 1739
Query: 181 ----GTSVQKAYSTRRSVRLVG-KSLS-------KMSLADTEDMESTKNDDVSEEMSVSQ 228
TS++K+ S S L G +S+S SL+ + + S+++ S+ +S S+
Sbjct: 1740 SLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSK 1799
Query: 229 NEGGSIETENGMLIS 243
+ GS T +S
Sbjct: 1800 STSGSTSTSTSGSLS 1814
Score = 33.9 bits (76), Expect = 4.6
Identities = 46/236 (19%), Positives = 88/236 (36%), Gaps = 21/236 (8%)
Query: 9 KELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNQREGGDIGTPAVQPRTAR--- 65
K + S M+ + T+ +++D+ S + L+ + G T + R
Sbjct: 1027 KSMSVSSSMSTSQSGSTSESLSDSQSTSDS-DSKSLSLSTSQSGSTSTSTSTSASVRTSE 1085
Query: 66 -RTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVP 124
++T+ +++S +ST + + E++ + T V TS
Sbjct: 1086 SQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLST 1145
Query: 125 AVSTRRKKEVI----VIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD 180
+ S R V + E D +SE + +++ A + S T S N T S+
Sbjct: 1146 SNSERTSTSVSDSTSLSTSESDSISESTSTSDSISE--AISASESTSISLSESNSTSDSE 1203
Query: 181 GTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
S + +SLS+ + T + S+ + S +S S +E GS T
Sbjct: 1204 SQSAS---------AFLSESLSESTSESTSESVSSSTSE-STSLSDSTSESGSTST 1249
Score = 33.1 bits (74), Expect = 7.9
Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T++ + + S ST + +E + + ++ ++ T TS +
Sbjct: 1324 STSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSD 1383
Query: 127 STRRKKEVIVIEDEDDV----VSEVQGKATDVAKTPAAAPSSRTRAGRSVRNK------T 176
ST + ++ V S+ +T + + + + S+ T +S T
Sbjct: 1384 STSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTST 1443
Query: 177 EISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
+SD TS+ K+ S S S +D++ + ++ ++ SE S S ++ S
Sbjct: 1444 SLSDSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSN 1503
Query: 237 ENGMLISLCLT 247
S L+
Sbjct: 1504 SGSASTSTSLS 1514
>dbj|BAB96440.1| MW2575 [Staphylococcus aureus subsp. aureus MW2]
gi|21284304|ref|NP_647392.1| hypothetical protein MW2575
[Staphylococcus aureus subsp. aureus MW2]
Length = 2275
Score = 41.6 bits (96), Expect = 0.022
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 25 TNVAMADALSA-LPHVEGLDEILNQREGGDIGTPAVQPRTARRTTTQRKPVKEAESTKVS 83
T+ + ++ +SA + + + E +N E ++ +T+ V ++ S VS
Sbjct: 1689 TSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTS----VSDSGSLSVS 1744
Query: 84 TRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVIVIEDEDDV 143
T + + +E E +L + V TS +VST + V E +
Sbjct: 1745 TSLRK------SESVSESSSLSGSQSMSDS--VSTSDSSSLSVSTSLRSSESVSESDSLS 1796
Query: 144 VSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVRLVGK---- 199
S+ +T + + + + S+ SV T +SD S+ + ST S L G
Sbjct: 1797 DSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLS 1856
Query: 200 ---SLSKM-SLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
SLS SL+D++ + S+++ SE S S ++ S T N S+ ++
Sbjct: 1857 GSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSIS 1908
Score = 38.1 bits (87), Expect = 0.25
Identities = 33/172 (19%), Positives = 69/172 (39%), Gaps = 10/172 (5%)
Query: 76 EAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKKEVI 135
++ ST +S + + ++ + +L ++ T + T +VST
Sbjct: 1523 DSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1582
Query: 136 VIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDGTSVQKAYSTRRSVR 195
E D S + +++ +A+ S+ T S T S TS++ + S +S
Sbjct: 1583 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQS-- 1640
Query: 196 LVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLISLCLT 247
MSL+ + + + +S+ +S S ++ S T M +S+ L+
Sbjct: 1641 --------MSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLS 1684
Score = 36.6 bits (83), Expect = 0.72
Identities = 34/181 (18%), Positives = 77/181 (41%), Gaps = 6/181 (3%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAV-VPTSRRRVPA 125
+T+ +++S VS+ ++ G +E + ++ D+ + ++ + TS+ +
Sbjct: 1016 STSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTS---DSDSKSLSLSTSQSGSTS 1072
Query: 126 VSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISDG--TS 183
ST V E + S ++ ++ + + + S+ S + IS TS
Sbjct: 1073 TSTSTSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTS 1132
Query: 184 VQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIETENGMLIS 243
+ ST S+ + S++D+ + ++++D +SE S S + +I IS
Sbjct: 1133 TSGSVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASESTFIS 1192
Query: 244 L 244
L
Sbjct: 1193 L 1193
Score = 35.4 bits (80), Expect = 1.6
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 63 TARRTTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRR 122
+A +T+ R +++S +ST + + + ++ + A T + S
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISL 1683
Query: 123 VPAVSTRRKKEVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD-- 180
+ ST ++ +S+ Q + V + + + S+ +S+ T +SD
Sbjct: 1684 SDSTSTSTSASEVMSAS----ISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSG 1739
Query: 181 ----GTSVQKAYSTRRSVRLVG-KSLS-------KMSLADTEDMESTKNDDVSEEMSVSQ 228
TS++K+ S S L G +S+S SL+ + + S+++ S+ +S S+
Sbjct: 1740 SLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSK 1799
Query: 229 NEGGSIETENGMLIS 243
+ GS T +S
Sbjct: 1800 STSGSTSTSTSGSLS 1814
Score = 35.0 bits (79), Expect = 2.1
Identities = 35/191 (18%), Positives = 73/191 (37%), Gaps = 10/191 (5%)
Query: 67 TTTQRKPVKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAV 126
+T++ + + S ST + +E + + ++ ++ T TS +
Sbjct: 1324 STSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSD 1383
Query: 127 STRRKKEVIVIEDEDDVVSEVQGKA------TDVAKTPAAAPSS----RTRAGRSVRNKT 176
ST + ++ V S ++ T +++ + + SS T S T
Sbjct: 1384 STSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSSYTSQSTSQSESTSTST 1443
Query: 177 EISDGTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEMSVSQNEGGSIET 236
+SD TS+ K+ S SV S +D++ + ++ ++ SE S S ++ S
Sbjct: 1444 SLSDSTSISKSTSQSGSVSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSN 1503
Query: 237 ENGMLISLCLT 247
S L+
Sbjct: 1504 SGSASTSTSLS 1514
>gb|AAP68304.1| At1g13350 [Arabidopsis thaliana] gi|15450802|gb|AAK96672.1| Unknown
protein [Arabidopsis thaliana]
Length = 495
Score = 41.2 bits (95), Expect = 0.029
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 74 VKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKK- 132
VKE TR++ +G V EVEQE+ + N ++ SRRR A+ + KK
Sbjct: 237 VKETRGNVERTRIDNDDKGDVVVWEVEQEDEELN-------LIEESRRRTQAIMEKYKKK 289
Query: 133 ------------EVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD 180
E+ I + V++V G T P + ++ +AG + + D
Sbjct: 290 LEQQNGFSSHDLELANIPKQSSTVADVLGSGT---LGPVTSAVNQAKAGLDI----DAVD 342
Query: 181 GTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEM 224
G + + + S + S S +LA T E + D +S++M
Sbjct: 343 GEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDM 386
>ref|NP_563928.3| protein kinase family protein [Arabidopsis thaliana]
gi|9958055|gb|AAG09544.1| Putative protein kinase
[Arabidopsis thaliana]
Length = 761
Score = 41.2 bits (95), Expect = 0.029
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 74 VKEAESTKVSTRVNRGGRGGVAEGEVEQENLDANVDAGTPAVVPTSRRRVPAVSTRRKK- 132
VKE TR++ +G V EVEQE+ + N ++ SRRR A+ + KK
Sbjct: 237 VKETRGNVERTRIDNDDKGDVVVWEVEQEDEELN-------LIEESRRRTQAIMEKYKKK 289
Query: 133 ------------EVIVIEDEDDVVSEVQGKATDVAKTPAAAPSSRTRAGRSVRNKTEISD 180
E+ I + V++V G T P + ++ +AG + + D
Sbjct: 290 LEQQNGFSSHDLELANIPKQSSTVADVLGSGT---LGPVTSAVNQAKAGLDI----DAVD 342
Query: 181 GTSVQKAYSTRRSVRLVGKSLSKMSLADTEDMESTKNDDVSEEM 224
G + + + S + S S +LA T E + D +S++M
Sbjct: 343 GEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDM 386
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.126 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,833,942
Number of Sequences: 2540612
Number of extensions: 15552364
Number of successful extensions: 55777
Number of sequences better than 10.0: 303
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 55439
Number of HSP's gapped (non-prelim): 526
length of query: 260
length of database: 863,360,394
effective HSP length: 125
effective length of query: 135
effective length of database: 545,783,894
effective search space: 73680825690
effective search space used: 73680825690
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 74 (33.1 bits)
Medicago: description of AC144806.1